Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,112,040 T→C A110A (GCA→GCG)  b2972 ← putative peptidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,112,0400TC99.7% 1095.7 / ‑5.3 352A110A (GCA→GCG) b2972putative peptidase
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (182/168);  total (183/169)
Fisher's exact test for biased strand distribution p-value = 4.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.84e-01

Only 100 of 369 total aligned reads displayed.

ACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAG  >  NC_000913/3111950‑3112129
                                                                                          |                                                                                         
 cTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCt                                                                                        >  2:5699158/1‑93 (MQ=255)
 cTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCt                                                                                        <  2:4727343/93‑1 (MQ=255)
    gcgGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTc                                                                                     <  1:536516/93‑1 (MQ=255)
     cgGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCa                                                                                    >  2:2003103/1‑93 (MQ=255)
      ggCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCaa                                                                                   >  1:4740147/1‑93 (MQ=255)
         aaTCAGCCAGGCGGATAATATCCTCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATaa                                                                                <  2:4592079/93‑1 (MQ=255)
         aaTCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATaa                                                                                >  1:926450/1‑93 (MQ=255)
         aaTCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATaa                                                                                <  2:4627850/93‑1 (MQ=255)
          aTCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAAc                                                                               >  2:121788/1‑93 (MQ=255)
            cAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTc                                                                             <  2:704675/93‑1 (MQ=255)
                cAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTccacc                                                                         <  2:3976160/93‑1 (MQ=255)
                cAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTccacc                                                                         <  2:1520168/93‑1 (MQ=255)
                cAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTcaacc                                                                         >  1:5665790/1‑93 (MQ=255)
                 aGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTccacca                                                                        <  1:5990456/93‑1 (MQ=255)
                 aGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTccacca                                                                        <  2:7223859/93‑1 (MQ=255)
                 aGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTccacca                                                                        >  1:5136028/1‑93 (MQ=255)
                 aGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTccacca                                                                        <  1:1395834/93‑1 (MQ=255)
                   gCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGc                                                                      <  1:2595927/93‑1 (MQ=255)
                      gATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGa                                                                   >  2:6588228/1‑93 (MQ=255)
                      gATAATACCATCGCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACGCCACCAGCGGa                                                                   <  1:7438778/93‑1 (MQ=255)
                       ataataTCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGAt                                                                  <  2:6471004/93‑1 (MQ=255)
                         aataTCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATaa                                                                <  2:16313/93‑1 (MQ=255)
                           tatCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACg                                                              >  2:367157/1‑93 (MQ=255)
                             tcatcaCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCt                                                            >  2:2496613/1‑93 (MQ=255)
                             tcatcaCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCt                                                            >  1:1147796/1‑93 (MQ=255)
                              catcaCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCtt                                                           <  2:1732182/93‑1 (MQ=255)
                               atcaCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTg                                                          <  1:2964585/93‑1 (MQ=255)
                                ccaCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGc                                                         <  1:4591094/92‑1 (MQ=255)
                                  aCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTg                                                       >  1:1977023/1‑93 (MQ=255)
                                   ccGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGa                                                      >  1:3697150/1‑93 (MQ=255)
                                    cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGAt                                                     <  1:1475374/93‑1 (MQ=255)
                                    cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGAt                                                     <  2:7359634/93‑1 (MQ=255)
                                      ccAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGAttt                                                   <  1:5244224/93‑1 (MQ=255)
                                      ccACCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGAttt                                                   <  2:6957081/93‑1 (MQ=255)
                                       cAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGAtttt                                                  >  1:3379730/1‑93 (MQ=255)
                                       cAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGAtttt                                                  >  1:1021165/1‑93 (MQ=255)
                                       cAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGAtttt                                                  >  1:6965015/1‑93 (MQ=255)
                                       cAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGAtttt                                                  >  2:4173124/1‑93 (MQ=255)
                                       cAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGAtttt                                                  <  2:2773167/93‑1 (MQ=255)
                                        aGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTc                                                 <  2:159354/93‑1 (MQ=255)
                                          cccccATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGc                                               <  1:5729539/93‑1 (MQ=255)
                                           ccccATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGcc                                              <  1:1256907/93‑1 (MQ=255)
                                           ccccATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGcc                                              <  1:4209314/93‑1 (MQ=255)
                                            cccATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCt                                             >  1:7117766/1‑93 (MQ=255)
                                            cccATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCt                                             >  2:6254674/1‑93 (MQ=255)
                                              cATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGa                                           >  2:5858490/1‑93 (MQ=255)
                                              cATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGa                                           <  1:6254675/93‑1 (MQ=255)
                                               aTCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGAc                                          >  1:2440433/1‑93 (MQ=255)
                                               aTCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGAc                                          >  2:3079486/1‑93 (MQ=255)
                                                tCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACa                                         <  1:718832/93‑1 (MQ=255)
                                                tCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACa                                         >  2:1163854/1‑93 (MQ=255)
                                                tCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACa                                         <  1:3501114/93‑1 (MQ=255)
                                                tCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACa                                         >  1:5393742/1‑93 (MQ=255)
                                                tCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACa                                         >  1:6507261/1‑93 (MQ=255)
                                                tCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTACACCAGCGGATAACGCTTGCTGATTTTCGCCTGACa                                         >  1:4467152/1‑93 (MQ=255)
                                                  cACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGt                                       <  2:910319/93‑1 (MQ=255)
                                                  cACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGt                                       >  2:5629958/1‑93 (MQ=255)
                                                  cACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGt                                       >  1:2458944/1‑93 (MQ=255)
                                                     tttCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTcgc                                    <  2:2861131/93‑1 (MQ=255)
                                                      ttCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTcgcg                                   <  2:4197755/93‑1 (MQ=255)
                                                        cTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGc                                 <  1:1596557/93‑1 (MQ=255)
                                                           gCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAGCTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAgc                              <  2:7445043/93‑1 (MQ=255)
                                                           gCCAGACAAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAgc                              <  1:7290523/93‑1 (MQ=255)
                                                             cagaccagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAgcgc                            >  2:6045577/1‑93 (MQ=255)
                                                               gaccagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGccc                          >  2:2707607/1‑93 (MQ=255)
                                                               gaccagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGccc                          <  2:5394529/93‑1 (MQ=255)
                                                               gaccagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGccc                          >  2:4244750/1‑93 (MQ=255)
                                                                accagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCt                         >  1:803759/1‑93 (MQ=255)
                                                                 ccagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCtt                        <  1:3620809/93‑1 (MQ=255)
                                                                 ccagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCtt                        <  2:7714083/93‑1 (MQ=255)
                                                                  cagacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCttt                       >  2:5080613/1‑93 (MQ=255)
                                                                   agacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTg                      <  2:7515384/93‑1 (MQ=255)
                                                                   agacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTg                      >  2:4781539/1‑93 (MQ=255)
                                                                    gacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGa                     <  1:3192920/93‑1 (MQ=255)
                                                                    gacTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGa                     >  2:5181026/1‑93 (MQ=255)
                                                                      cTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGc                   <  1:6580777/93‑1 (MQ=255)
                                                                       tCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCa                  >  1:612455/1‑93 (MQ=255)
                                                                       ccGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCCCCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCa                  <  2:2245820/92‑1 (MQ=255)
                                                                         gCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATc                <  1:3970098/93‑1 (MQ=255)
                                                                         gCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATc                <  1:4867569/93‑1 (MQ=255)
                                                                         gCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATc                >  2:4449102/1‑93 (MQ=255)
                                                                         gCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATc                <  2:5898866/93‑1 (MQ=255)
                                                                         gCCAGCAAAAAAACAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATc                <  2:3248816/93‑1 (MQ=255)
                                                                          ccAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCa               <  2:1356080/93‑1 (MQ=255)
                                                                            aGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGc             <  2:4098703/93‑1 (MQ=255)
                                                                            aGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGc             <  1:1799357/93‑1 (MQ=255)
                                                                               aaaaaaTCAAGCGCTGTCACTACCTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCTGCAGCGCCCTTTGAGCATCAGCCAg          <  2:711320/93‑1 (MQ=255)
                                                                               aaaaaaGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAg          >  2:6736915/1‑93 (MQ=255)
                                                                                aaaaaGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAgg         >  2:2918491/1‑93 (MQ=255)
                                                                                aaaaaGCAAGCGCTGTCAATAACGCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAgg         <  1:1068756/93‑1 (MQ=255)
                                                                                 aaaaGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGga        >  2:840767/1‑93 (MQ=255)
                                                                                 aaaaGCAAGCGCTGTCAATAACGCCCCCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGga        <  2:3598846/93‑1 (MQ=255)
                                                                                   aagcaagcGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGgaga      <  1:7591706/93‑1 (MQ=255)
                                                                                    aGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGaa     >  2:5508603/1‑93 (MQ=255)
                                                                                    aGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGaa     >  1:4313256/1‑93 (MQ=255)
                                                                                    aGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGaa     <  1:40772/93‑1 (MQ=255)
                                                                                     gCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAAc    <  1:6804276/93‑1 (MQ=255)
                                                                                     gCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAAc    >  1:2766441/1‑93 (MQ=255)
                                                                                       aaGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAg  <  1:7815231/93‑1 (MQ=255)
                                                                                       aaGCGCGGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAg  <  2:2630391/93‑1 (MQ=255)
                                                                                          |                                                                                         
ACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAG  >  NC_000913/3111950‑3112129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GACACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGA  >  NC_000913/3111947‑3112133
                                                                                             |                                                                                             
GACACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGC                                                                                               <  SRR4302543.7553592/94‑1 (MQ=60)
GACACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGC                                                                                               <  SRR4302543.73850/94‑1 (MQ=60)
 ACACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCG                                                                                              <  SRR4302543.2523144/94‑1 (MQ=60)
 ACACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCG                                                                                              >  SRR4302543.4391268/1‑94 (MQ=60)
  CACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGC                                                                                             >  SRR4302543.5228554/1‑94 (MQ=60)
   ACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCT                                                                                            <  SRR4302543.1908789/94‑1 (MQ=60)
   ACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCT                                                                                            >  SRR4302543.7309543/1‑94 (MQ=60)
   ACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCT                                                                                            >  SRR4302543.1189627/1‑94 (MQ=60)
   ACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCT                                                                                            >  SRR4302543.473217/1‑94 (MQ=60)
    CTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTG                                                                                           >  SRR4302543.871273/1‑94 (MQ=60)
    CTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTG                                                                                           >  SRR4302543.4274447/1‑94 (MQ=60)
      CGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTC                                                                                         <  SRR4302543.6151452/94‑1 (MQ=60)
       GCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCA                                                                                        <  SRR4302543.541487/94‑1 (MQ=60)
       GCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCA                                                                                        >  SRR4302543.686108/1‑94 (MQ=60)
       CCGGCAATCGGCCAGGCTGATAATATCGTCACCGCCAGCCCCCATCCCCTTTCGGGCCAGGCCAGACTCGCCAGCAAAAAAGCAAGTGCTGTCA                                                                                        <  SRR4302543.4828305/94‑1 (MQ=60)
        CGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAA                                                                                       >  SRR4302543.4783461/1‑94 (MQ=60)
         GGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAAT                                                                                      <  SRR4302543.7520899/94‑1 (MQ=60)
           CAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAA                                                                                    <  SRR4302543.4004501/94‑1 (MQ=60)
           CAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAA                                                                                    >  SRR4302543.6548703/1‑94 (MQ=60)
           CAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAA                                                                                    >  SRR4302543.934552/1‑94 (MQ=60)
           CAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAA                                                                                    >  SRR4302543.6319092/1‑94 (MQ=60)
            AATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAAC                                                                                   <  SRR4302543.4976965/94‑1 (MQ=60)
            AATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAAC                                                                                   <  SRR4302543.2283216/94‑1 (MQ=60)
             ATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACT                                                                                  >  SRR4302543.4328714/1‑94 (MQ=60)
             ATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACT                                                                                  <  SRR4302543.5627217/94‑1 (MQ=60)
             ATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACT                                                                                  >  SRR4302543.3593271/1‑94 (MQ=60)
             ATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACT                                                                                  >  SRR4302543.7136063/1‑94 (MQ=60)
             ATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACT                                                                                  >  SRR4302543.742951/1‑94 (MQ=60)
              TCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTC                                                                                 <  SRR4302543.4083160/94‑1 (MQ=60)
              TCAGCCAGGCGGATAACATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTC                                                                                 <  SRR4302543.7395577/94‑1 (MQ=60)
                AGCCAGGCTGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCC                                                                               >  SRR4302543.6251428/1‑94 (MQ=60)
                AGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCACGCGCCGTCAATAACTCCA                                                                               >  SRR4302543.4593158/1‑94 (MQ=60)
                 GCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCAC                                                                              <  SRR4302543.4110654/94‑1 (MQ=60)
                  CCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACC                                                                             <  SRR4302543.1557938/94‑1 (MQ=60)
                  CCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACC                                                                             >  SRR4302543.5717483/1‑94 (MQ=60)
                  CCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACC                                                                             >  SRR4302543.6019493/1‑94 (MQ=60)
                  CCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACC                                                                             >  SRR4302543.2575106/1‑94 (MQ=60)
                  CCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCAACC                                                                             >  SRR4302543.5717482/1‑94 (MQ=60)
                   CAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCA                                                                            >  SRR4302543.7796864/1‑94 (MQ=60)
                   CAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCA                                                                            >  SRR4302543.5182458/1‑94 (MQ=60)
                   CAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCA                                                                            >  SRR4302543.3689298/1‑94 (MQ=60)
                   CAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCA                                                                            >  SRR4302543.5182457/1‑94 (MQ=60)
                   CAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTACACCA                                                                            >  SRR4302543.1858424/1‑94 (MQ=60)
                   CAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGAGCTGTCAATAACTCCACCA                                                                            >  SRR4302543.7796863/1‑94 (MQ=60)
                    AGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAG                                                                           <  SRR4302543.1408416/94‑1 (MQ=60)
                    AGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAG                                                                           <  SRR4302543.6045357/94‑1 (MQ=60)
                    AGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAG                                                                           <  SRR4302543.4576935/94‑1 (MQ=60)
                    AGGCGGATAATATCACCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAG                                                                           <  SRR4302543.2601136/94‑1 (MQ=60)
                     GGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAATTCCACCAGG                                                                          >  SRR4302543.6874651/1‑94 (MQ=60)
                     GGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGC                                                                          <  SRR4302543.1261149/94‑1 (MQ=60)
                      GCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCG                                                                         <  SRR4302543.2619513/94‑1 (MQ=60)
                      GCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCG                                                                         <  SRR4302543.7200795/94‑1 (MQ=60)
                        GGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGA                                                                       >  SRR4302543.7494649/1‑94 (MQ=60)
                         GATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGAT                                                                      <  SRR4302543.1747902/94‑1 (MQ=60)
                         GATAATACCATCGCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACGCCACCAGCGGAT                                                                      <  SRR4302543.7510080/94‑1 (MQ=60)
                          ATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAACAAGCAAGCGCTGTCAATAACTCCACCAGCGGATA                                                                     >  SRR4302543.3329638/1‑94 (MQ=60)
                          ATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATA                                                                     >  SRR4302543.159671/1‑94 (MQ=60)
                           TAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAA                                                                    >  SRR4302543.986449/1‑94 (MQ=60)
                            AATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAAC                                                                   <  SRR4302543.856770/94‑1 (MQ=60)
                            AATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAAC                                                                   <  SRR4302543.3268574/94‑1 (MQ=60)
                            AATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGCAAATAACTCCACCAGCGGATAAC                                                                   <  SRR4302543.1405668/94‑1 (MQ=60)
                             ATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACG                                                                  >  SRR4302543.729573/1‑94 (MQ=60)
                             ATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACG                                                                  <  SRR4302543.5411084/94‑1 (MQ=60)
                             ATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACG                                                                  >  SRR4302543.5587372/1‑94 (MQ=60)
                               ATCATCCCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCT                                                                <  SRR4302543.4308583/94‑1 (MQ=60)
                               ATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCT                                                                >  SRR4302543.1158252/1‑94 (MQ=60)
                               ATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCT                                                                >  SRR4302543.1158253/1‑94 (MQ=60)
                               ATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCT                                                                <  SRR4302543.4522855/94‑1 (MQ=60)
                               ATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCT                                                                >  SRR4302543.5421830/1‑94 (MQ=60)
                               ATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCT                                                                <  SRR4302543.1853310/94‑1 (MQ=60)
                                TCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTT                                                               <  SRR4302543.6690803/94‑1 (MQ=60)
                                 CATCCCCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTG                                                              <  SRR4302543.5771775/94‑1 (MQ=60)
                                 CATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTG                                                              <  SRR4302543.1266125/94‑1 (MQ=60)
                                  ATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGC                                                             <  SRR4302543.2991514/94‑1 (MQ=60)
                                  ATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGC                                                             >  SRR4302543.1079593/1‑94 (MQ=60)
                                   TCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCT                                                            <  SRR4302543.2060194/94‑1 (MQ=60)
                                   CCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCT                                                            <  SRR4302543.4632795/94‑1 (MQ=60)
                                    CACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTG                                                           >  SRR4302543.1994748/1‑94 (MQ=60)
                                     ACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGA                                                          >  SRR4302543.3729654/1‑94 (MQ=60)
                                       CGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATT                                                        <  SRR4302543.1488668/94‑1 (MQ=60)
                                         CCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTT                                                      <  SRR4302543.5291496/94‑1 (MQ=60)
                                         CCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTT                                                      >  SRR4302543.4774273/1‑94 (MQ=60)
                                         CCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTT                                                      >  SRR4302543.4774272/1‑94 (MQ=60)
                                         CCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTT                                                      >  SRR4302543.7030560/1‑94 (MQ=60)
                                         CCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTT                                                      >  SRR4302543.1030201/1‑94 (MQ=60)
                                         CCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTT                                                      >  SRR4302543.3410056/1‑94 (MQ=60)
                                         CCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTT                                                      <  SRR4302543.3959951/94‑1 (MQ=60)
                                         CCAGCCCCCACCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTT                                                      <  SRR4302543.7612840/94‑1 (MQ=60)
                                          CAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTC                                                     >  SRR4302543.3110138/1‑94 (MQ=60)
                                          CAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTC                                                     >  SRR4302543.7592651/1‑94 (MQ=60)
                                          CAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTC                                                     >  SRR4302543.5621534/1‑94 (MQ=60)
                                          CAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTC                                                     <  SRR4302543.2855968/94‑1 (MQ=60)
                                          CAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTC                                                     <  SRR4302543.3618680/94‑1 (MQ=60)
                                           caCCCCCATCCCCTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCG                                                    <  SRR4302543.380260/92‑1 (MQ=60)
                                             CCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCC                                                  <  SRR4302543.5781819/94‑1 (MQ=60)
                                              CCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCT                                                 >  SRR4302543.5012168/1‑94 (MQ=60)
                                              CCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCT                                                 >  SRR4302543.1997084/1‑94 (MQ=60)
                                              CCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCT                                                 >  SRR4302543.5796618/1‑94 (MQ=60)
                                              CCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCT                                                 >  SRR4302543.7186910/1‑94 (MQ=60)
                                              CCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCT                                                 <  SRR4302543.4247478/94‑1 (MQ=60)
                                              CCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCT                                                 <  SRR4302543.1268162/94‑1 (MQ=60)
                                               CCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTG                                                >  SRR4302543.6638208/1‑94 (MQ=60)
                                               CCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTG                                                >  SRR4302543.3322048/1‑94 (MQ=60)
                                               CCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTG                                                >  SRR4302543.7142993/1‑94 (MQ=60)
                                                CCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGA                                               >  SRR4302543.366307/1‑94 (MQ=60)
                                                CCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGA                                               >  SRR4302543.4436564/1‑94 (MQ=60)
                                                 CATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGAC                                              <  SRR4302543.6313676/94‑1 (MQ=60)
                                                 CATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGAC                                              >  SRR4302543.2462434/1‑94 (MQ=60)
                                                 CATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGAC                                              >  SRR4302543.286703/1‑94 (MQ=60)
                                                  ATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACA                                             >  SRR4302543.6568561/1‑94 (MQ=60)
                                                  ATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACA                                             >  SRR4302543.6628574/1‑94 (MQ=60)
                                                  ATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACA                                             >  SRR4302543.301922/1‑94 (MQ=60)
                                                  ATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACA                                             >  SRR4302543.5442783/1‑94 (MQ=60)
                                                  ATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACA                                             >  SRR4302543.4507649/1‑94 (MQ=60)
                                                  ATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCAACCAGCGGATAACGCTTGCTGATTTTCGCCTGACA                                             >  SRR4302543.3104385/1‑94 (MQ=60)
                                                  ATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTACACCAGCGGATAACGCTTGCTGATTTTCGCCTGACA                                             >  SRR4302543.4507650/1‑94 (MQ=60)
                                                   TCCCCTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGAAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAG                                            <  SRR4302543.3532424/94‑1 (MQ=60)
                                                   TCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAG                                            >  SRR4302543.6235540/1‑94 (MQ=60)
                                                   TCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAG                                            <  SRR4302543.3518752/94‑1 (MQ=60)
                                                   TCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAG                                            <  SRR4302543.5336969/94‑1 (MQ=60)
                                                   TCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAG                                            <  SRR4302543.3532425/94‑1 (MQ=60)
                                                   TCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAG                                            <  SRR4302543.725328/94‑1 (MQ=60)
                                                    CCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGT                                           >  SRR4302543.5440126/1‑94 (MQ=60)
                                                    CCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGT                                           >  SRR4302543.2481116/1‑94 (MQ=60)
                                                    CCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGT                                           >  SRR4302543.2481115/1‑94 (MQ=60)
                                                     CACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTC                                          >  SRR4302543.5393679/1‑94 (MQ=60)
                                                     CACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTC                                          <  SRR4302543.5009465/94‑1 (MQ=60)
                                                      cctttcggcCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCG                                         <  SRR4302543.6179104/85‑1 (MQ=60)
                                                      CCTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCG                                         <  SRR4302543.1806785/94‑1 (MQ=60)
                                                      ACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCG                                         >  SRR4302543.2749457/1‑94 (MQ=60)
                                                           CTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCA                                    <  SRR4302543.3529914/94‑1 (MQ=60)
                                                           CTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCA                                    <  SRR4302543.1610801/94‑1 (MQ=60)
                                                              GCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCG                                 <  SRR4302543.2472724/94‑1 (MQ=60)
                                                              GCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCG                                 >  SRR4302543.4129720/1‑94 (MQ=60)
                                                              GCCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCG                                 <  SRR4302543.4873845/94‑1 (MQ=60)
                                                              GCCAGACAAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCG                                 <  SRR4302543.7360891/94‑1 (MQ=60)
                                                               CCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGC                                <  SRR4302543.4198904/94‑1 (MQ=60)
                                                               CCAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGC                                >  SRR4302543.7044053/1‑94 (MQ=60)
                                                                CAGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCC                               <  SRR4302543.6119213/94‑1 (MQ=60)
                                                                 AGACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCC                              >  SRR4302543.7916824/1‑94 (MQ=60)
                                                                  GACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCT                             >  SRR4302543.810828/1‑94 (MQ=60)
                                                                   gcccgcccCGCCAGCAAAAAAGCCAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTGCGCCTGACAGTCGCGGCAGCGCCCTT                            <  SRR4302543.2239206/86‑1 (MQ=60)
                                                                   ACCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTT                            >  SRR4302543.1135645/1‑94 (MQ=60)
                                                                    CCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTT                           <  SRR4302543.3652712/94‑1 (MQ=60)
                                                                    CCAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTT                           >  SRR4302543.5736645/1‑94 (MQ=60)
                                                                     CAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTG                          <  SRR4302543.1410859/94‑1 (MQ=60)
                                                                     CAGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTG                          <  SRR4302543.6620619/94‑1 (MQ=60)
                                                                      AGACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTCGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGA                         <  SRR4302543.1452555/94‑1 (MQ=60)
                                                                       GACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAG                        <  SRR4302543.3221705/94‑1 (MQ=60)
                                                                        ACTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGC                       >  SRR4302543.6891691/1‑94 (MQ=60)
                                                                         CTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCA                      <  SRR4302543.6276466/94‑1 (MQ=60)
                                                                         CTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCA                      >  SRR4302543.618055/1‑94 (MQ=60)
                                                                         CTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCA                      <  SRR4302543.7229745/94‑1 (MQ=60)
                                                                         CTCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCA                      <  SRR4302543.6642751/94‑1 (MQ=60)
                                                                          TCGCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCAT                     <  SRR4302543.2645252/94‑1 (MQ=60)
                                                                            GCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCA                   <  SRR4302543.4005288/94‑1 (MQ=60)
                                                                            GCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCA                   <  SRR4302543.842082/94‑1 (MQ=60)
                                                                            GCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCA                   <  SRR4302543.4911947/94‑1 (MQ=60)
                                                                            GCCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCA                   <  SRR4302543.5267441/94‑1 (MQ=60)
                                                                            GCCAGCAAAAAAGCAAGCGCTGTAAATAACTCCGCCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCA                   <  SRR4302543.1072307/94‑1 (MQ=60)
                                                                             CCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATacg                  >  SRR4302543.2658435/1‑91 (MQ=60)
                                                                             CCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAG                  >  SRR4302543.7188416/1‑94 (MQ=60)
                                                                             CCAGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAG                  >  SRR4302543.1063657/1‑94 (MQ=60)
                                                                               AGCAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCC                <  SRR4302543.1815469/94‑1 (MQ=60)
                                                                                 CAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAG              <  SRR4302543.1351082/94‑1 (MQ=60)
                                                                                 CAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAG              >  SRR4302543.4191550/1‑94 (MQ=60)
                                                                                 CAAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAG              >  SRR4302543.7914163/1‑94 (MQ=60)
                                                                                  AAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGG             <  SRR4302543.1583087/94‑1 (MQ=60)
                                                                                  AAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGG             <  SRR4302543.261576/94‑1 (MQ=60)
                                                                                  AAAAAAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGG             >  SRR4302543.1477277/1‑94 (MQ=60)
                                                                                   AAAAAGCAAGCGCTGTCAATAACGCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGA            <  SRR4302543.1078362/94‑1 (MQ=60)
                                                                                      AAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAA         <  SRR4302543.7663834/94‑1 (MQ=60)
                                                                                      AAGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAA         >  SRR4302543.4352431/1‑94 (MQ=60)
                                                                                       AGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAAC        >  SRR4302543.2791619/1‑94 (MQ=60)
                                                                                       AGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAAC        <  SRR4302543.3726999/94‑1 (MQ=60)
                                                                                       AGCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAAC        <  SRR4302543.41145/94‑1 (MQ=60)
                                                                                        GCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACA       <  SRR4302543.7868646/94‑1 (MQ=60)
                                                                                        GCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACA       <  SRR4302543.6868525/94‑1 (MQ=60)
                                                                                        GCAAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACA       <  SRR4302543.6846320/94‑1 (MQ=60)
                                                                                          AAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGC     <  SRR4302543.346729/94‑1 (MQ=60)
                                                                                          AAGCGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGC     <  SRR4302543.7888876/94‑1 (MQ=60)
                                                                                             CGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGA  <  SRR4302543.935965/94‑1 (MQ=60)
                                                                                             CGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGA  >  SRR4302543.4140644/1‑94 (MQ=60)
                                                                                             |                                                                                             
GACACTCGCGGCAATCAGCCAGGCGGATAATATCATCACCGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTCAATAACTCCACCAGCGGATAACGCTTGCTGATTTTCGCCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGA  >  NC_000913/3111947‑3112133

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑