Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,130,334	A→G	V30V (GTT→GTC)	b2983 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,130,334	0	A	G	100.0%	854.5 / NA	268	V30V (GTT→GTC)	b2983	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (112/156); total (112/156)

Only 100 of 300 total aligned reads displayed.

CGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACAACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAA  >  NC_000913/3130244‑3130423

cGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCCTTACCGGCACACGAGAGCGCCCACAGAACCAGCAAGGCGCTcaccac                                                                                         >  2:80882/1‑93 (MQ=255)

 gATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCacgaca                                                                                        >  2:6839112/1‑93 (MQ=255)

 gATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCCGCACACGCGAGCGCCAACAGACCCAGCCAAGCGCTCcccaca                                                                                        >  2:231610/1‑93 (MQ=255)

  aTTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACAt                                                                                       >  2:4821811/1‑93 (MQ=255)

  aTTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACAt                                                                                       <  1:6303112/93‑1 (MQ=255)

  aTTGCACAATCACCAGTACGCCAAACATGGCGGGCGGCATCCCTTTAACGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACAt                                                                                       >  1:5606021/1‑93 (MQ=255)

  aTTGCACAACCACCAGTACCCAAAACATGGCGGGCGTCATCCCTTTCCCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACAt                                                                                       <  2:4640881/93‑1 (MQ=255)

    tGCACAATCACCAGTACGCCAAACATGGCGGGGGGCATCCCTTTCACCGCACGCGAGAGCGGCGAAAAACCCAGCAAAGCGCCCACGACATTa                                                                                     >  2:433231/1‑93 (MQ=255)

       acaATCCCCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTg                                                                                  <  1:2293980/93‑1 (MQ=255)

       acaATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTg                                                                                  <  1:1017955/93‑1 (MQ=255)

        caATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTgg                                                                                 >  1:2047296/1‑93 (MQ=255)

        caATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTgg                                                                                 >  1:3785960/1‑93 (MQ=255)

        aaaTCACCAGTACGCAAAACATGGCGGGCGTCATCCCTTTCCCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTgg                                                                                 <  1:6625818/92‑1 (MQ=255)

           tCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGc                                                                              <  2:1088921/93‑1 (MQ=255)

             ccaaGTACACAAAACAGGGCGGGCGTCTCCCCTTTCCCGGCACAGGAGACCGCCAACACCCCCAGCAAGGCGTTCACGACATTACTGGAGCCt                                                                            <  2:7241566/90‑1 (MQ=255)

             aCCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCt                                                                            >  2:5224931/1‑93 (MQ=255)

              ccAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTa                                                                           >  1:722372/1‑93 (MQ=255)

                aGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGCCCCAGCAAGGCGCTCACGACATTACTGGAGCCTAAc                                                                         <  2:6535211/93‑1 (MQ=255)

                aGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAAc                                                                         <  1:4175342/93‑1 (MQ=255)

                   aCGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGCCCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAg                                                                      <  2:2111150/93‑1 (MQ=255)

                   aCGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAg                                                                      <  1:2531291/93‑1 (MQ=255)

                   aCGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAg                                                                      <  1:2226976/93‑1 (MQ=255)

                       cAAACATGGCGGGCGTCTTCCCTTTACCGGCACACGAGAGCGCCACCAGCCCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGgcgc                                                                  <  1:6336402/93‑1 (MQ=255)

                          aCATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTAt                                                               >  2:453657/1‑93 (MQ=255)

                          aCATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTAt                                                               <  1:3986982/93‑1 (MQ=255)

                            aTGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTg                                                             <  2:3818521/93‑1 (MQ=255)

                            aTGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTg                                                             >  2:7128748/1‑93 (MQ=255)

                             tGGCGGGCGTCATCCCTTTACCGGCACCCGAGAGCGCCACCAGCCCCAGCAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGc                                                            <  1:669115/93‑1 (MQ=255)

                              ggcgggcgTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCg                                                           <  2:7429389/93‑1 (MQ=255)

                               gcgggcgTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGa                                                          >  2:6947676/1‑93 (MQ=255)

                                gtggcgTCCTCCCTTTCCCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaa                                                         <  2:5905351/91‑1 (MQ=255)

                                 gggcgTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaat                                                        <  2:1196154/93‑1 (MQ=255)

                                  ggcgTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaata                                                       <  1:1374479/93‑1 (MQ=255)

                                    ggTCATCCCTGTACCGGCACACGAGAGCGCAAACAGACCCAGCAAGGGGAAAACGACATTACTGGAGCCTAAACAGGCGCTATTGCGaataat                                                     <  1:5441569/92‑1 (MQ=255)

                                    cgTCCTCCCTTTCCCGGCACGCGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaataat                                                     <  2:1785587/93‑1 (MQ=255)

                                     gTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATg                                                    >  2:486718/1‑93 (MQ=255)

                                      tCATCCTTTTGCCGGCACCCGAGAGCGCCAACAGCCCCAGCAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATgg                                                   <  1:3133127/93‑1 (MQ=255)

                                      tCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATgg                                                   >  1:7919732/1‑93 (MQ=255)

                                      tCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATgg                                                   >  2:2653096/1‑93 (MQ=255)

                                      tCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATgg                                                   >  1:5524456/1‑93 (MQ=255)

                                      tCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATgg                                                   >  2:7674127/1‑93 (MQ=255)

                                      tCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAACgg                                                   >  2:5392033/1‑93 (MQ=255)

                                       cATCCCTTTCCCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGt                                                  <  1:6133973/93‑1 (MQ=255)

                                        accccTTTCCGGGCACAGGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTg                                                 <  2:5781096/91‑1 (MQ=255)

                                        aTCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTg                                                 >  2:2561217/1‑93 (MQ=255)

                                        aTCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTg                                                 <  1:3608623/93‑1 (MQ=255)

                                        aTCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTg                                                 <  2:2267368/93‑1 (MQ=255)

                                        aTCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTg                                                 <  1:4905007/93‑1 (MQ=255)

                                         tCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGc                                                >  2:63798/1‑93 (MQ=255)

                                          cccTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGca                                               >  2:6681100/1‑92 (MQ=255)

                                          cccTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCg                                               >  1:6994065/1‑93 (MQ=255)

                                           ccTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGa                                              >  1:5939504/1‑93 (MQ=255)

                                             tttACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGaaa                                            <  1:5410774/93‑1 (MQ=255)

                                              ttACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAc                                           <  1:3754281/93‑1 (MQ=255)

                                               tACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAcg                                          <  1:5144127/93‑1 (MQ=255)

                                                 ccGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAcgcg                                        <  1:4722205/93‑1 (MQ=255)

                                                   ggCACAGGAGAGCCCCAACAGACCCAGCAGGGCCCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGcc                                      <  1:1636458/93‑1 (MQ=255)

                                                    gCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCa                                     >  2:6012754/1‑93 (MQ=255)

                                                    gCACACGAGAGCGCAAACAGCCCGAGAAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCa                                     <  1:1855315/93‑1 (MQ=255)

                                                     cacaCGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCAt                                    >  2:4404810/1‑93 (MQ=255)

                                                     cacaCGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCAt                                    <  1:319698/93‑1 (MQ=255)

                                                     cacaCGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCAt                                    <  1:7797092/93‑1 (MQ=255)

                                                      acacGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATc                                   <  1:5342498/93‑1 (MQ=255)

                                                       cacGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCt                                  <  2:3926589/93‑1 (MQ=255)

                                                         cGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGc                                >  2:4134775/1‑93 (MQ=255)

                                                            gagCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCaaa                             >  1:7347970/1‑93 (MQ=255)

                                                            gagCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCaaa                             >  2:4034748/1‑93 (MQ=255)

                                                             agCCCCAACAGCCCCAGCAGGGCCCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAAc                            <  1:5741967/93‑1 (MQ=255)

                                                                gcCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCaa                         <  1:2581792/93‑1 (MQ=255)

                                                                 ccAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAAt                        <  1:2130614/93‑1 (MQ=255)

                                                                 ccAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAAt                        <  1:7184350/93‑1 (MQ=255)

                                                                 caaaCAGACCCGGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAAt                        <  2:3686049/91‑1 (MQ=255)

                                                                  cAACAGCCCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATg                       <  1:159552/93‑1 (MQ=255)

                                                                   aaCAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGt                      >  2:511023/1‑93 (MQ=255)

                                                                   aaCAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGt                      >  2:1568055/1‑93 (MQ=255)

                                                                    agaGACCCAGCAGGCCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGtt                     <  1:4501151/91‑1 (MQ=255)

                                                                     cAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGttt                    >  2:1291834/1‑93 (MQ=255)

                                                                      aGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTg                   >  2:3566857/1‑93 (MQ=255)

                                                                      aGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTg                   >  1:2998436/1‑93 (MQ=255)

                                                                      aGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTg                   <  1:3881620/93‑1 (MQ=255)

                                                                       gACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGa                  <  1:1251508/93‑1 (MQ=255)

                                                                       gACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGa                  <  1:5243772/93‑1 (MQ=255)

                                                                       gACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGa                  <  1:5482403/93‑1 (MQ=255)

                                                                        aCCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGAt                 <  2:5066322/93‑1 (MQ=255)

                                                                         cccAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCAATCTGCAAACCAATGTTTGATg                >  2:2730103/1‑93 (MQ=255)

                                                                           cAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGtt              >  2:3246887/1‑93 (MQ=255)

                                                                            aGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTa             >  1:4423997/1‑93 (MQ=255)

                                                                             gCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATATGCAAACCAATGTTTGATGTTaa            >  2:5413877/1‑93 (MQ=255)

                                                                              cAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTaaa           <  1:2753153/93‑1 (MQ=255)

                                                                               aaGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTaaaa          >  2:2419438/1‑93 (MQ=255)

                                                                                aGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAc         <  2:5294523/93‑1 (MQ=255)

                                                                                aGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAc         <  2:4965983/93‑1 (MQ=255)

                                                                                 ggCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAcc        <  2:6148416/93‑1 (MQ=255)

                                                                                  gcgcTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAccc       <  2:6230453/93‑1 (MQ=255)

                                                                                  gcgcTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAccc       <  1:4279749/93‑1 (MQ=255)

                                                                                  gcgcTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAccc       <  1:7853862/93‑1 (MQ=255)

                                                                                    gcTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGc     <  1:7545008/93‑1 (MQ=255)

                                                                                     cTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGcc    >  2:7554609/1‑93 (MQ=255)

                                                                                       cacgACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCaa  >  2:299511/1‑93 (MQ=255)

                                                                                       cacgACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATATGCAAACCAATGTTTGATGTTAAAACCCGCCaa  <  2:7872441/93‑1 (MQ=255)

CGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACAACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAA  >  NC_000913/3130244‑3130423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GTACGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACAACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAATTCA  >  NC_000913/3130241‑3130427

GTACGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACCCGAGAGCGCCAAAAGACCCAGCAAGGCGCTCACG                                                                                               >  SRR4302543.1781210/1‑94 (MQ=60)

  ACGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGAC                                                                                             >  SRR4302543.7262581/1‑94 (MQ=60)

  ACGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCCGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCCCACGAC                                                                                             >  SRR4302543.6970583/1‑94 (MQ=60)

  ACGATTCCACAATCACCAGTACGCAAAACATGGCGGGCGTCACCCCTTTCCCGGCACACGAGAGCGCCAACAGCCCCAGCAAGGCGCTCACGAC                                                                                             <  SRR4302543.1604876/94‑1 (MQ=60)

   CGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACA                                                                                            >  SRR4302543.3213832/1‑94 (MQ=60)

   CGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGGCATCCCTTTACCGGGAACCGAGAGCGCCAACAGACCCAGCACGGCGCTCCCGACA                                                                                            >  SRR4302543.161036/1‑94 (MQ=60)

   CGATTGCAAAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACA                                                                                            <  SRR4302543.6374001/94‑1 (MQ=60)

    GATTGCACAATCACCAGTACGCCAAACATGGCGGGCGGCATCCCTTTAACGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACAT                                                                                           >  SRR4302543.5657097/1‑94 (MQ=60)

     ATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATT                                                                                          <  SRR4302543.6362413/94‑1 (MQ=60)

      aagcggcggattaagtttttctggcttattttttttcaagcagaagaCGGCATACGAGATCGCCAACAGACCCAGCAAGGCGCTCACGACATTA                                                                                         <  SRR4302543.5486957/47‑1 (MQ=60)

      TTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTA                                                                                         <  SRR4302543.7888765/94‑1 (MQ=60)

       TGCACAATCACCAGTACGCCAACCATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTAC                                                                                        <  SRR4302543.3858425/94‑1 (MQ=60)

        GCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTCCCGGCACACGAGAGCGCCAACAGCCCCAGCAAGGCGCTCACGACATTACT                                                                                       <  SRR4302543.7292041/94‑1 (MQ=60)

         CACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTG                                                                                      >  SRR4302543.7452333/1‑94 (MQ=60)

         CACAATCACCAGTACGCCAAACATGGCGGGCGGCATCCCCTTACCGGCACACGAGAGCGCCAACAGCACCAGCAAGGCGCTCACGACATTACTG                                                                                      >  SRR4302543.5154108/1‑94 (MQ=60)

          ACAATCCCCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGG                                                                                     <  SRR4302543.2314906/94‑1 (MQ=60)

          ACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGG                                                                                     >  SRR4302543.3819312/1‑94 (MQ=60)

          ACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGG                                                                                     >  SRR4302543.2065642/1‑94 (MQ=60)

          ACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGG                                                                                     <  SRR4302543.1026958/94‑1 (MQ=60)

          ACAATCACCAGTACGCAAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGCCCCAGCAAGGCGCTCACGACATTACTGG                                                                                     <  SRR4302543.3416645/94‑1 (MQ=60)

           CAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGA                                                                                    <  SRR4302543.5600019/94‑1 (MQ=60)

           CAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGA                                                                                    >  SRR4302543.2630466/1‑94 (MQ=60)

           AAATCACCAGTACGCAAAACATGGCGGGCGTCATCCCTTTCCCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGA                                                                                    <  SRR4302543.6688304/94‑1 (MQ=60)

            AATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAG                                                                                   >  SRR4302543.5536050/1‑94 (MQ=60)

              cccccagtagccaaaacatggcggccgccatcccttcccaggcacacgagaccacaacCAGACCCAGCAAGGCGCTCACGACATTACTGGAGCC                                                                                 <  SRR4302543.3238393/36‑1 (MQ=60)

               CACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTAACGGCACACGAGAGCGCCAACAGAACCAGCAAGGGGCTCCCGACATTACTTGAGACT                                                                                >  SRR4302543.485571/1‑94 (MQ=60)

                ACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTA                                                                               >  SRR4302543.728887/1‑94 (MQ=60)

                 CCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAA                                                                              >  SRR4302543.1145392/1‑94 (MQ=60)

                  CAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAAC                                                                             >  SRR4302543.4329630/1‑94 (MQ=60)

                   AGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACC                                                                            <  SRR4302543.4213167/94‑1 (MQ=60)

                    GTACGCCAAACATGGCGGGCGTCACCCCTTTCCCGGCACACGAGAGCGCCAACAGCCCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCA                                                                           <  SRR4302543.294050/94‑1 (MQ=60)

                     TACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAG                                                                          <  SRR4302543.2398380/94‑1 (MQ=60)

                      ACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGG                                                                         <  SRR4302543.2228465/94‑1 (MQ=60)

                      ACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGG                                                                         <  SRR4302543.2554331/94‑1 (MQ=60)

                      ACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGG                                                                         <  SRR4302543.2247083/94‑1 (MQ=60)

                      ACGCCAAACATGGCGGCCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGG                                                                         <  SRR4302543.2247084/94‑1 (MQ=60)

                       CGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGC                                                                        >  SRR4302543.5335107/1‑94 (MQ=60)

                        GCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCG                                                                       >  SRR4302543.2571967/1‑94 (MQ=60)

                          CAAACATGGCGGGCGTCTTCCCTTTACCGGCACACGAGAGCGCCACCAGCCCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCT                                                                     <  SRR4302543.6395993/94‑1 (MQ=60)

                          CAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCCCCAACAGCCCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCT                                                                     <  SRR4302543.4546103/94‑1 (MQ=60)

                            AACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTAT                                                                   <  SRR4302543.2008988/94‑1 (MQ=60)

                             ACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATT                                                                  <  SRR4302543.4022392/94‑1 (MQ=60)

                             ACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATT                                                                  >  SRR4302543.6704629/1‑94 (MQ=60)

                              CATGGCGGGCGTCATCCCTTGACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTG                                                                 <  SRR4302543.4661697/94‑1 (MQ=60)

                               ATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGC                                                                >  SRR4302543.6314806/1‑94 (MQ=60)

                                TGGCGGGCGTCATCCCTTTACCGGCACCCGAGAGCGCCACCAGCCCCAGCAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCG                                                               <  SRR4302543.675281/94‑1 (MQ=60)

                                TGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGCCCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCG                                                               <  SRR4302543.6221440/94‑1 (MQ=60)

                                GGGCGGCCGTCACCCCTTTCCCGGCACAGGAGAGCCCAAACAGCCCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCG                                                               <  SRR4302543.7202253/94‑1 (MQ=60)

                                 GGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGA                                                              <  SRR4302543.4122075/94‑1 (MQ=60)

                                   GGGGCGTCACCCTTTTCCCGCCACAGGAGAGCCCCAACAGCCCCAGCAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAAT                                                            <  SRR4302543.5722583/94‑1 (MQ=50)

                                     GGCTTCATCCTTTTCCCGGCACAGGAGAGCGCAAACAGCCCCAGCAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAA                                                          <  SRR4302543.1539333/94‑1 (MQ=60)

                                     GGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAA                                                          <  SRR4302543.1386827/94‑1 (MQ=60)

                                      GCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAAT                                                         <  SRR4302543.4986434/94‑1 (MQ=60)

                                      GCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAAT                                                         <  SRR4302543.641086/94‑1 (MQ=60)

                                       GGTCATCCCTGTACCGGCACACGAGAGCGCAAACAGACCCAGCAAGGGGAAAACGACATTACTGGAGCCTAAACAGGCGCTATTGCGAATAATG                                                        <  SRR4302543.5490967/94‑1 (MQ=60)

                                       CGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATG                                                        <  SRR4302543.5490966/94‑1 (MQ=60)

                                        ctcacCCCTTTCCCGGCACAGGAGCGCCCCAACAGCCCCAGCAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGG                                                       <  SRR4302543.4501957/89‑1 (MQ=60)

                                        GTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATCATGG                                                       >  SRR4302543.5235639/1‑94 (MQ=60)

                                        GTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGG                                                       >  SRR4302543.5574632/1‑94 (MQ=60)

                                        GTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGG                                                       >  SRR4302543.5895285/1‑94 (MQ=60)

                                        GTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGG                                                       >  SRR4302543.7994120/1‑94 (MQ=60)

                                         TCATCCTTTTGCCGGCACCCGAGAGCGCCAACAGCCCCAGCAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGT                                                      <  SRR4302543.3161305/94‑1 (MQ=60)

                                          CATCCCTTTCCCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTG                                                     <  SRR4302543.6192080/94‑1 (MQ=60)

                                          CATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTG                                                     >  SRR4302543.6137224/1‑94 (MQ=60)

                                          CATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTG                                                     >  SRR4302543.6914122/1‑94 (MQ=60)

                                           ATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGCCATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGC                                                    <  SRR4302543.5529559/94‑1 (MQ=60)

                                           ATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGC                                                    <  SRR4302543.5488201/94‑1 (MQ=60)

                                           ATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGC                                                    <  SRR4302543.5529561/94‑1 (MQ=60)

                                           ATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGC                                                    >  SRR4302543.2741045/1‑94 (MQ=60)

                                           ATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGC                                                    <  SRR4302543.4949713/94‑1 (MQ=60)

                                           ATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGC                                                    <  SRR4302543.3640460/94‑1 (MQ=60)

                                            TCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCG                                                   >  SRR4302543.7059964/1‑94 (MQ=60)

                                             CCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGA                                                  >  SRR4302543.5993848/1‑94 (MQ=60)

                                             CCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGA                                                  >  SRR4302543.6592623/1‑94 (MQ=60)

                                              CCTTTCCCGCCACACGAGACCGCCAACAGCCCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAA                                                 <  SRR4302543.3184382/94‑1 (MQ=60)

                                               CTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAA                                                <  SRR4302543.7978428/94‑1 (MQ=60)

                                                ttcaacgcCACACGAGAGAGCAAAAAGACCGAGCAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAC                                               <  SRR4302543.1792199/86‑1 (MQ=60)

                                                TTTCCCGGCACACGAGAGCCCCAACAGCCCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAC                                               <  SRR4302543.1764573/94‑1 (MQ=60)

                                                TTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAC                                               <  SRR4302543.5459982/94‑1 (MQ=60)

                                                 TTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACG                                              >  SRR4302543.7882859/1‑94 (MQ=60)

                                                 TTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACG                                              <  SRR4302543.3787312/94‑1 (MQ=60)

                                                  TACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGC                                             <  SRR4302543.2083310/94‑1 (MQ=60)

                                                  TACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGC                                             >  SRR4302543.7293743/1‑94 (MQ=60)

                                                  TACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGC                                             <  SRR4302543.5190636/94‑1 (MQ=60)

                                                   ACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCG                                            <  SRR4302543.2092708/94‑1 (MQ=60)

                                                    CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGC                                           <  SRR4302543.4765352/94‑1 (MQ=60)

                                                    CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGC                                           >  SRR4302543.1376040/1‑94 (MQ=60)

                                                     CGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCC                                          >  SRR4302543.5903477/1‑94 (MQ=60)

                                                      GGCACAGGAGAGCCCCAACAGACCCAGCAGGGCCCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCA                                         <  SRR4302543.1651056/94‑1 (MQ=60)

                                                       GCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCAT                                        <  SRR4302543.1795369/94‑1 (MQ=60)

                                                       GCACACGAGAGCGCAAACAGCCCGAGAAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCAT                                        <  SRR4302543.1871997/94‑1 (MQ=60)

                                                        CACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATC                                       <  SRR4302543.5532191/94‑1 (MQ=60)

                                                        CACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATC                                       <  SRR4302543.322590/94‑1 (MQ=60)

                                                        CACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATC                                       <  SRR4302543.3688755/94‑1 (MQ=60)

                                                        CACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATC                                       <  SRR4302543.7870565/94‑1 (MQ=60)

                                                         acgcgagagcccaaacaccccaagaagGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCT                                      <  SRR4302543.7037178/67‑1 (MQ=60)

                                                         ACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCT                                      <  SRR4302543.7947608/94‑1 (MQ=60)

                                                         ACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCT                                      <  SRR4302543.5390833/94‑1 (MQ=60)

                                                         ACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCT                                      <  SRR4302543.5390834/94‑1 (MQ=60)

                                                         ACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCT                                      <  SRR4302543.2359076/94‑1 (MQ=60)

                                                          CACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTG                                     >  SRR4302543.3898174/1‑94 (MQ=60)

                                                           ACGAGACCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGC                                    >  SRR4302543.3935629/1‑94 (MQ=60)

                                                            CGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGACATCTGCA                                   >  SRR4302543.7693273/1‑94 (MQ=60)

                                                             GAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAA                                  >  SRR4302543.108463/1‑94 (MQ=60)

                                                              AGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAA                                 >  SRR4302543.6390538/1‑94 (MQ=60)

                                                              AGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAA                                 >  SRR4302543.7418654/1‑94 (MQ=60)

                                                                AGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACC                               >  SRR4302543.8007161/1‑94 (MQ=60)

                                                                AGCCCCAACAGCCCCAGCAGGGCCCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACC                               <  SRR4302543.5794315/94‑1 (MQ=60)

                                                                 GCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCA                              <  SRR4302543.3769480/94‑1 (MQ=60)

                                                                  CGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAA                             >  SRR4302543.4394945/1‑94 (MQ=60)

                                                                  CGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAA                             >  SRR4302543.3815718/1‑94 (MQ=60)

                                                                   GCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAAT                            <  SRR4302543.2605292/94‑1 (MQ=60)

                                                                   GCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAAT                            <  SRR4302543.7859455/94‑1 (MQ=60)

                                                                    CCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATG                           <  SRR4302543.2149687/94‑1 (MQ=60)

                                                                    CCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATG                           <  SRR4302543.7254059/94‑1 (MQ=60)

                                                                    CCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATG                           <  SRR4302543.5454169/94‑1 (MQ=60)

                                                                    CCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATG                           >  SRR4302543.3932632/1‑94 (MQ=60)

                                                                     CAACAGCCCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGT                          <  SRR4302543.160919/94‑1 (MQ=60)

                                                                     CAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGT                          <  SRR4302543.3819125/94‑1 (MQ=60)

                                                                      AACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTT                         >  SRR4302543.7560786/1‑94 (MQ=60)

                                                                      AACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTT                         >  SRR4302543.2573027/1‑94 (MQ=60)

                                                                      AACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTT                         >  SRR4302543.570873/1‑94 (MQ=60)

                                                                       AGAGACCCAGCAGGCCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTT                        <  SRR4302543.4542073/94‑1 (MQ=60)

                                                                       ACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTT                        >  SRR4302543.1903283/1‑94 (MQ=60)

                                                                       ACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTT                        >  SRR4302543.4299967/1‑94 (MQ=60)

                                                                       ACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTT                        <  SRR4302543.4542072/94‑1 (MQ=60)

                                                                        CAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTG                       >  SRR4302543.3025626/1‑94 (MQ=60)

                                                                        CAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTG                       <  SRR4302543.2281202/94‑1 (MQ=60)

                                                                         AGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGA                      <  SRR4302543.3915891/94‑1 (MQ=60)

                                                                         AGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGA                      <  SRR4302543.7406349/94‑1 (MQ=60)

                                                                          GGCCCAGCAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGAT                     <  SRR4302543.509786/94‑1 (MQ=60)

                                                                          GCCCCAGCAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGAT                     <  SRR4302543.302910/94‑1 (MQ=60)

                                                                          GCCCCAGCAGGGCCCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGAT                     <  SRR4302543.2904253/94‑1 (MQ=60)

                                                                          GACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGAT                     <  SRR4302543.5532098/94‑1 (MQ=60)

                                                                          GACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGAT                     <  SRR4302543.1262729/94‑1 (MQ=60)

                                                                          GACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGAT                     <  SRR4302543.1262728/94‑1 (MQ=60)

                                                                          GACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGAT                     <  SRR4302543.5291036/94‑1 (MQ=60)

                                                                          AACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGAT                     <  SRR4302543.614343/94‑1 (MQ=60)

                                                                           ACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATG                    <  SRR4302543.825974/94‑1 (MQ=60)

                                                                              CAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTA                 >  SRR4302543.4464088/1‑94 (MQ=60)

                                                                                 CAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAA              <  SRR4302543.2778195/94‑1 (MQ=60)

                                                                                  AAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAC             <  SRR4302543.5273641/94‑1 (MQ=60)

                                                                                  AAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAC             >  SRR4302543.3055432/1‑94 (MQ=60)

                                                                                   AGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACC            <  SRR4302543.4071899/94‑1 (MQ=60)

                                                                                    GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCC           <  SRR4302543.4240203/94‑1 (MQ=60)

                                                                                    GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCC           <  SRR4302543.7238758/94‑1 (MQ=60)

                                                                                    GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCC           >  SRR4302543.5596631/1‑94 (MQ=60)

                                                                                     GCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCG          <  SRR4302543.4318648/94‑1 (MQ=60)

                                                                                     GCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCG          <  SRR4302543.1399468/94‑1 (MQ=60)

                                                                                     GCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCG          <  SRR4302543.7927860/94‑1 (MQ=60)

                                                                                       GCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCC        <  SRR4302543.3528261/94‑1 (MQ=60)

                                                                                       GCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCC        >  SRR4302543.2174601/1‑94 (MQ=60)

                                                                                       GCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCC        <  SRR4302543.7616894/94‑1 (MQ=60)

                                                                                       GCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCC        <  SRR4302543.4890171/94‑1 (MQ=60)

                                                                                         TCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAA      <  SRR4302543.5337817/94‑1 (MQ=60)

                                                                                          AACAACATTACTGGAGCCTCTCCAGGCGCTATTGCGAATAATGCTCCGAACCGCACCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAAT     <  SRR4302543.572368/94‑1 (MQ=60)

                                                                                           ACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAATT    <  SRR4302543.4149304/94‑1 (MQ=60)

                                                                                            CGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAATTC   <  SRR4302543.6777135/94‑1 (MQ=60)

                                                                                            CGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAATTC   <  SRR4302543.3982482/94‑1 (MQ=60)

                                                                                            CGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAATTC   >  SRR4302543.1433159/1‑94 (MQ=60)

                                                                                             GACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATTTTAAAACCCGCCAATTCA  >  SRR4302543.6828009/1‑94 (MQ=60)

                                                                                             GACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAATTCA  <  SRR4302543.899270/94‑1 (MQ=60)

                                                                                             GACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAATTCA  >  SRR4302543.6917333/1‑94 (MQ=60)

                                                                                             GACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAATTCA  >  SRR4302543.4744490/1‑94 (MQ=60)

                                                                                             GACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAATTCA  <  SRR4302543.1706514/94‑1 (MQ=60)

                                                                                             GACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAATTCA  <  SRR4302543.119376/94‑1 (MQ=60)

GTACGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACAACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAATTCA  >  NC_000913/3130241‑3130427

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`