Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,166,935 2 bp→CG coding (312‑313/483 nt) b3023 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,166,9350GC99.7% 1109.4 / NA 354L105V (CTT→GTT) b3023hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (194/159);  minor base A (0/1);  total (194/160)
Fisher's exact test for biased strand distribution p-value = 4.52e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*NC_0009133,166,9360CG100.0% 1118.2 / NA 354Q104H (CAG→CAC) b3023hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (193/161);  total (193/161)

Only 100 of 370 total aligned reads displayed.

GTGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAAGCTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTGCC  >  NC_000913/3166848‑3167022
                                                                                       ||                                                                                      
gTGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGc                                                                                    >  1:3575556/1‑93 (MQ=255)
 tGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCg                                                                                   >  1:7873110/1‑93 (MQ=255)
  gCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACAGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCgg                                                                                  >  1:2518200/1‑93 (MQ=255)
   cTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCggg                                                                                 >  1:7737494/1‑93 (MQ=255)
    tttACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGc                                                                                <  2:903247/93‑1 (MQ=255)
     ttACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGGCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCggggc                                                                               >  2:2853057/1‑91 (MQ=255)
      tACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCa                                                                              <  2:667174/93‑1 (MQ=255)
        cGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACg                                                                            >  1:132911/1‑93 (MQ=255)
         gCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACgg                                                                           <  1:7223551/93‑1 (MQ=255)
          cATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGc                                                                          <  1:1882118/93‑1 (MQ=255)
            ttttCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGGCACGGCAt                                                                        >  2:2435093/1‑93 (MQ=255)
            ttttCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCAt                                                                        >  2:3372429/1‑93 (MQ=255)
              ttCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATaa                                                                      >  2:1346340/1‑93 (MQ=255)
              ttCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATaa                                                                      >  2:3967181/1‑93 (MQ=255)
              ttCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATaa                                                                      <  1:3753184/93‑1 (MQ=255)
               tctcGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCCTAAc                                                                     >  2:7370460/1‑93 (MQ=255)
               tctcGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCACAATACCGTGTGTGAAATATCGTCCAGCTAGCCACCGTGGCGGGCCACGGCATAAc                                                                     <  2:7027266/93‑1 (MQ=255)
                  cgccgcTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTc                                                                  >  1:4133925/1‑93 (MQ=255)
                   gccgcTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTcc                                                                 <  2:3011566/93‑1 (MQ=255)
                    ccgcTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCa                                                                >  2:6492481/1‑93 (MQ=255)
                    ccgcTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACCTCCa                                                                >  2:1965645/1‑93 (MQ=255)
                    ccgcTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGCCATAACCTCCa                                                                >  1:3843446/1‑93 (MQ=255)
                     cgcTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCAc                                                               <  2:4237823/93‑1 (MQ=255)
                      gcTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCAcc                                                              >  2:3482659/1‑93 (MQ=255)
                      gcTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCAcc                                                              >  2:1243720/1‑93 (MQ=255)
                      gcTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCAcc                                                              >  2:6374284/1‑93 (MQ=255)
                      gcTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCAcc                                                              >  1:3018024/1‑93 (MQ=255)
                       cTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAAGGGGGCGGGCCACGGCCTAACGCCCACCg                                                             >  1:2678706/1‑93 (MQ=255)
                        ttGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCgg                                                            >  2:2149823/1‑93 (MQ=255)
                         tGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGt                                                           <  1:2598652/93‑1 (MQ=255)
                          gcaggcagCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTa                                                          <  2:2064623/93‑1 (MQ=255)
                           caggcagCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTaa                                                         <  1:3531231/93‑1 (MQ=255)
                           caggcagCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTaa                                                         <  2:760391/93‑1 (MQ=255)
                           caggcagCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTaa                                                         <  2:4692496/93‑1 (MQ=255)
                                agCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCa                                                    <  2:480919/93‑1 (MQ=255)
                                agCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCa                                                    <  2:4966437/93‑1 (MQ=255)
                                 gCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCAc                                                   >  1:5742759/1‑93 (MQ=255)
                                 gCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCAc                                                   >  2:7916896/1‑93 (MQ=255)
                                 gCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCAc                                                   >  1:7320836/1‑93 (MQ=255)
                                  ccAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCAcc                                                  >  1:2843565/1‑93 (MQ=255)
                                   cAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCa                                                 <  2:2542498/93‑1 (MQ=255)
                                   cAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCa                                                 <  1:6396598/93‑1 (MQ=255)
                                     gTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCAtt                                               >  2:2671924/1‑93 (MQ=255)
                                     gTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCAtt                                               <  1:1033759/93‑1 (MQ=255)
                                     gTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCAtt                                               >  1:5447696/1‑93 (MQ=255)
                                      tGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGACACGGCATAACGTCCACCGGTAAGTTCACAATTg                                              >  1:2242426/1‑93 (MQ=255)
                                       ggCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGc                                             <  2:1689853/93‑1 (MQ=255)
                                       ggCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGc                                             <  1:4873028/93‑1 (MQ=255)
                                         cGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTc                                           <  1:4993718/93‑1 (MQ=255)
                                          gAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTca                                          <  2:1527593/93‑1 (MQ=255)
                                          gAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTca                                          <  1:934283/93‑1 (MQ=255)
                                              gatgCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACAcc                                      <  2:5481039/93‑1 (MQ=255)
                                               atgCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCa                                     <  2:1780039/93‑1 (MQ=255)
                                                 gCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATa                                   <  1:7595836/93‑1 (MQ=255)
                                                  ccccATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATaa                                  <  1:3360070/93‑1 (MQ=255)
                                                   cccATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAAc                                 >  1:1667478/1‑93 (MQ=255)
                                                    ccATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACg                                <  2:6761499/93‑1 (MQ=255)
                                                      aTACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGAt                              >  1:4516443/1‑93 (MQ=255)
                                                      aTACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGAt                              <  2:564376/93‑1 (MQ=255)
                                                      aTACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGAt                              >  1:2133167/1‑93 (MQ=255)
                                                      aTACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGAACGTTCACCATGCCTCACACCATAACGAt                              >  1:958080/1‑93 (MQ=255)
                                                       tACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGAtt                             >  1:6968858/1‑93 (MQ=255)
                                                       tACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGAtt                             <  2:7890279/93‑1 (MQ=255)
                                                       tACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGGCCACCGGTAAATTCACCATTGCTCACACCCTAACCAtt                             >  2:6296535/1‑93 (MQ=255)
                                                        aCCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTa                            <  1:5242790/93‑1 (MQ=255)
                                                         ccGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTAt                           <  2:27085/93‑1 (MQ=255)
                                                         ccGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTAt                           >  1:5943553/1‑93 (MQ=255)
                                                         ccGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTAt                           >  2:2262970/1‑93 (MQ=255)
                                                          cGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATc                          <  2:5348007/93‑1 (MQ=255)
                                                          cGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATc                          >  2:5784663/1‑93 (MQ=255)
                                                           gtgtgtGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCg                         >  1:7150361/1‑93 (MQ=255)
                                                            tgtgtgAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCgg                        >  1:4696909/1‑93 (MQ=255)
                                                               gtgAAATATCGTGCAGGGCGCACACGTGGCGGGCCTCGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGaa                     <  1:6779641/93‑1 (MQ=255)
                                                               gtgAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGaa                     <  1:436166/93‑1 (MQ=255)
                                                               gtgAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGaa                     >  1:6611218/1‑93 (MQ=255)
                                                               gtgAAACAACGTCCAGCTCGCCAACGTGGCGAGCCTCGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGaa                     <  1:6137695/93‑1 (MQ=255)
                                                                   aaTATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCgg                 <  2:4103921/93‑1 (MQ=255)
                                                                   aaTATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCgg                 <  2:6163300/93‑1 (MQ=255)
                                                                    atatCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGt                <  1:1575345/93‑1 (MQ=255)
                                                                    atatCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGt                <  2:1068208/93‑1 (MQ=255)
                                                                     tatCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGtt               >  1:7436375/1‑93 (MQ=255)
                                                                     aatCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGtt               <  2:7488650/92‑1 (MQ=255)
                                                                       tCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCg             <  2:2795959/93‑1 (MQ=255)
                                                                        cGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGc            <  2:686396/93‑1 (MQ=255)
                                                                         ctCCAGCTCGCCAGCGTGGCGGGCTACGGCATAACGTCCCCCGGTAAGTTCACCATTGCGCACACCATAACGATTATCGGGAATCGGTTCGCt           <  2:4442987/92‑1 (MQ=255)
                                                                           ccggCTCGCAAACGTGGCGGGCCACGGCATAACGTCCGCCGGTAAGTTCACCAATGCTCACACCATAACGATTATCGGGAATCGGTTCGCTaa         <  2:3721585/90‑1 (MQ=255)
                                                                           ccAGCTCGCCAGCGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTaa         <  2:449658/93‑1 (MQ=255)
                                                                           ccAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTaa         <  1:1472239/93‑1 (MQ=255)
                                                                           ccAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTaa         <  1:3150276/93‑1 (MQ=255)
                                                                            cAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGGAAGTTCACCATTTCTCCCACCATAACGATTATCGGGAATCGGTTCGCTAAc        >  2:5300114/1‑93 (MQ=255)
                                                                             cgCTCGCCAACGTGGCGGGGCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACg       <  2:3904979/92‑1 (MQ=255)
                                                                             aGCTCGCCAACGTGGCGGGCCACGGCATAACATCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACg       >  2:1792439/1‑93 (MQ=255)
                                                                              gCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGc      <  1:6662223/93‑1 (MQ=255)
                                                                              gCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGc      >  2:4912709/1‑93 (MQ=255)
                                                                              gCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGc      >  2:819489/1‑93 (MQ=255)
                                                                               cTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCt     <  1:2071785/93‑1 (MQ=255)
                                                                                 cGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTGc   <  2:5200686/93‑1 (MQ=255)
                                                                                 cGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTGc   <  2:4194515/93‑1 (MQ=255)
                                                                                 cGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTGc   <  2:3787220/93‑1 (MQ=255)
                                                                                 cGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTGc   <  2:3609524/93‑1 (MQ=255)
                                                                                       ||                                                                                      
GTGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAAGCTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTGCC  >  NC_000913/3166848‑3167022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GAATCGGTGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAAGCTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTGCCGC  >  NC_000913/3166842‑3167024
                                                                                             |                                                                                         
GAATCGGTGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAAC                                                                                           <  SRR4302543.2962461/94‑1 (MQ=60)
GAATCGGTGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAAC                                                                                           <  SRR4302543.2410811/94‑1 (MQ=60)
     GGTGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGC                                                                                      >  SRR4302543.3607155/1‑94 (MQ=60)
     GGTGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGC                                                                                      <  SRR4302543.776795/94‑1 (MQ=60)
      GTGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCG                                                                                     >  SRR4302543.7947230/1‑94 (MQ=60)
      GTGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCG                                                                                     >  SRR4302543.4377595/1‑94 (MQ=60)
      GTGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCG                                                                                     <  SRR4302543.4990285/94‑1 (MQ=60)
      GTGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCG                                                                                     <  SRR4302543.87527/94‑1 (MQ=60)
       TGCTTTACGCATTTTGTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGG                                                                                    <  SRR4302543.7699156/94‑1 (MQ=60)
       TGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGG                                                                                    <  SRR4302543.7699155/94‑1 (MQ=60)
       TGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACAGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGG                                                                                    >  SRR4302543.2541078/1‑94 (MQ=60)
        GCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGG                                                                                   >  SRR4302543.7810597/1‑94 (MQ=60)
         CTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGC                                                                                  >  SRR4302543.4481835/1‑94 (MQ=60)
          TTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCC                                                                                 <  SRR4302543.6940296/94‑1 (MQ=60)
           TTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCA                                                                                <  SRR4302543.3725626/94‑1 (MQ=60)
           TTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCA                                                                                <  SRR4302543.3855757/94‑1 (MQ=60)
           TTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAAGTATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCA                                                                                <  SRR4302543.3855759/94‑1 (MQ=60)
            TACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCAC                                                                               >  SRR4302543.858712/1‑94 (MQ=60)
            TACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCAC                                                                               >  SRR4302543.3590338/1‑94 (MQ=60)
             TCGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACG                                                                              <  SRR4302543.6124691/94‑1 (MQ=60)
             ACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACG                                                                              >  SRR4302543.134097/1‑94 (MQ=60)
              CGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGG                                                                             <  SRR4302543.5314499/94‑1 (MQ=60)
               GCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGC                                                                            <  SRR4302543.7293555/94‑1 (MQ=60)
                CATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGGA                                                                           >  SRR4302543.1377143/1‑94 (MQ=60)
                CATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCA                                                                           <  SRR4302543.1899027/94‑1 (MQ=60)
                CATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCA                                                                           >  SRR4302543.6977115/1‑94 (MQ=60)
                CATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCA                                                                           >  SRR4302543.2191707/1‑94 (MQ=60)
                 CTTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCAT                                                                          <  SRR4302543.5032167/94‑1 (MQ=60)
                 CTTTTCTCGCCGCTGGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCAT                                                                          <  SRR4302543.2791086/94‑1 (MQ=60)
                 ATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGTATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCAT                                                                          >  SRR4302543.5514007/1‑94 (MQ=60)
                 ATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCAT                                                                          <  SRR4302543.2791085/94‑1 (MQ=60)
                 ATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCAT                                                                          >  SRR4302543.6710061/1‑94 (MQ=60)
                 ATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCAT                                                                          >  SRR4302543.2033315/1‑94 (MQ=60)
                 ATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCAT                                                                          >  SRR4302543.5088011/1‑94 (MQ=60)
                 ATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCAT                                                                          <  SRR4302543.3983661/94‑1 (MQ=60)
                   TTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAA                                                                        <  SRR4302543.2556046/94‑1 (MQ=60)
                    TTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAAC                                                                       <  SRR4302543.3168556/94‑1 (MQ=60)
                    TTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAAC                                                                       >  SRR4302543.225465/1‑94 (MQ=60)
                    TTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAAC                                                                       <  SRR4302543.3786208/94‑1 (MQ=60)
                      CTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGC                                                                     >  SRR4302543.4909344/1‑94 (MQ=60)
                       TCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTC                                                                    >  SRR4302543.4171231/1‑94 (MQ=60)
                         GCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCA                                                                  >  SRR4302543.5076105/1‑94 (MQ=60)
                         GCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGCCATAACCTCCA                                                                  >  SRR4302543.3877387/1‑94 (MQ=60)
                          CCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCAC                                                                 >  SRR4302543.5190163/1‑94 (MQ=60)
                          CCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCAC                                                                 >  SRR4302543.7882549/1‑94 (MQ=60)
                          CCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCAC                                                                 <  SRR4302543.7160334/94‑1 (MQ=60)
                          CCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCAC                                                                 >  SRR4302543.6821286/1‑94 (MQ=60)
                           CGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACC                                                                >  SRR4302543.3045315/1‑94 (MQ=60)
                            GCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAAGGGGGCGGGCCACGGCCTAACGCCCACCG                                                               >  SRR4302543.2702987/1‑94 (MQ=60)
                            GCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCG                                                               >  SRR4302543.1541377/1‑94 (MQ=60)
                            GCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCG                                                               <  SRR4302543.3204470/94‑1 (MQ=60)
                            GCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCG                                                               >  SRR4302543.2702986/1‑94 (MQ=60)
                            GCTTGCAGGCAGCCAGTGGCGAATGATGCCACATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCG                                                               <  SRR4302543.3363746/94‑1 (MQ=60)
                             CTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGG                                                              >  SRR4302543.2798283/1‑94 (MQ=60)
                             CTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGG                                                              >  SRR4302543.969451/1‑94 (MQ=60)
                             CTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGG                                                              <  SRR4302543.3326377/94‑1 (MQ=60)
                             CTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGG                                                              <  SRR4302543.5983308/94‑1 (MQ=60)
                             CTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGACACGGCATAACGTCCACCGG                                                              >  SRR4302543.957194/1‑94 (MQ=60)
                               TGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTA                                                            <  SRR4302543.2622255/94‑1 (MQ=60)
                                 CAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAG                                                          <  SRR4302543.3562676/94‑1 (MQ=60)
                                 CAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAG                                                          >  SRR4302543.4987061/1‑94 (MQ=60)
                                 CAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAG                                                          >  SRR4302543.6744001/1‑94 (MQ=60)
                                 CAGACAGCCAGTGCGGAATGATGCCCCATGCCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAG                                                          <  SRR4302543.3672614/94‑1 (MQ=60)
                                   GGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTT                                                        <  SRR4302543.1851076/94‑1 (MQ=60)
                                   GGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTT                                                        <  SRR4302543.1851075/94‑1 (MQ=60)
                                    GCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCAAAACGTCCACCGGTAAGTTC                                                       >  SRR4302543.1652515/1‑94 (MQ=60)
                                     CAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCA                                                      >  SRR4302543.5796813/1‑94 (MQ=60)
                                      AGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCAC                                                     >  SRR4302543.5795109/1‑94 (MQ=60)
                                      AGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCAC                                                     >  SRR4302543.7391348/1‑94 (MQ=60)
                                       GCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACC                                                    <  SRR4302543.2279810/94‑1 (MQ=60)
                                       GCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACC                                                    >  SRR4302543.2869543/1‑94 (MQ=60)
                                       GCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACC                                                    >  SRR4302543.402512/1‑94 (MQ=60)
                                       GCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACC                                                    <  SRR4302543.7741309/94‑1 (MQ=60)
                                       GCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGACCCGGCATTACGTCCACCGGTAAGTTCACC                                                    >  SRR4302543.5660440/1‑94 (MQ=60)
                                         CAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGGCACGGCATAACGTCCACCGGTAAGTTCAACAT                                                  >  SRR4302543.266749/1‑94 (MQ=60)
                                         CAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCAT                                                  <  SRR4302543.6456817/94‑1 (MQ=60)
                                         CAGTGACGAATGATGCCCCATACCGTGGGTGAAATATCGGCCAGCGCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCAT                                                  <  SRR4302543.6595929/94‑1 (MQ=60)
                                          AGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATT                                                 >  SRR4302543.6338357/1‑94 (MQ=60)
                                          AGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATT                                                 >  SRR4302543.5497123/1‑94 (MQ=60)
                                          AGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATT                                                 >  SRR4302543.4829179/1‑94 (MQ=60)
                                          AGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATT                                                 >  SRR4302543.996435/1‑94 (MQ=60)
                                           GTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTG                                                <  SRR4302543.1042938/94‑1 (MQ=60)
                                           GTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGACACGGCATAACGTCCACCGGTAAGTTCACAATTG                                                >  SRR4302543.2262763/1‑94 (MQ=60)
                                             GGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCT                                              <  SRR4302543.1386223/94‑1 (MQ=60)
                                             GGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCT                                              <  SRR4302543.4917449/94‑1 (MQ=60)
                                              GCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTC                                             >  SRR4302543.3062479/1‑94 (MQ=60)
                                              GCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTC                                             >  SRR4302543.2544910/1‑94 (MQ=60)
                                               CGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCA                                            <  SRR4302543.5039176/94‑1 (MQ=60)
                                               CGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCA                                            >  SRR4302543.2098592/1‑94 (MQ=60)
                                               CGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCA                                            >  SRR4302543.1488092/1‑94 (MQ=60)
                                                GAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCAC                                           <  SRR4302543.942452/94‑1 (MQ=60)
                                                 AATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACA                                          <  SRR4302543.6133616/94‑1 (MQ=60)
                                                 AATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACA                                          >  SRR4302543.2344987/1‑94 (MQ=60)
                                                  ATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACAC                                         >  SRR4302543.1275236/1‑94 (MQ=60)
                                                  ATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACAC                                         >  SRR4302543.7361482/1‑94 (MQ=60)
                                                   TGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACC                                        >  SRR4302543.4319198/1‑94 (MQ=60)
                                                   TGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCAGTAAGTTCACCATTCCTCACACC                                        >  SRR4302543.6645567/1‑94 (MQ=60)
                                                     ATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCAT                                      >  SRR4302543.7390712/1‑94 (MQ=60)
                                                      TGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATA                                     >  SRR4302543.86961/1‑94 (MQ=60)
                                                      TGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATA                                     <  SRR4302543.7639280/94‑1 (MQ=60)
                                                       GCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAA                                    <  SRR4302543.7667996/94‑1 (MQ=60)
                                                       GCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAA                                    <  SRR4302543.7218688/94‑1 (MQ=60)
                                                        CCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAAC                                   >  SRR4302543.372566/1‑94 (MQ=60)
                                                        CCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAAC                                   <  SRR4302543.3390291/94‑1 (MQ=60)
                                                        CCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAAC                                   >  SRR4302543.1682415/1‑94 (MQ=60)
                                                         CCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACG                                  >  SRR4302543.943768/1‑94 (MQ=60)
                                                         CCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACG                                  >  SRR4302543.7834777/1‑94 (MQ=60)
                                                          CCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGA                                 >  SRR4302543.5393588/1‑94 (MQ=60)
                                                          CCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGA                                 >  SRR4302543.6484493/1‑94 (MQ=60)
                                                          CCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACCGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGA                                 >  SRR4302543.3533870/1‑94 (MQ=60)
                                                           CATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGAT                                >  SRR4302543.4557525/1‑94 (MQ=60)
                                                           CATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGAT                                >  SRR4302543.2152265/1‑94 (MQ=60)
                                                           CATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGAACGTTCACCATGCCTCACACCATAACGAT                                >  SRR4302543.966478/1‑94 (MQ=60)
                                                            ATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATT                               >  SRR4302543.7265718/1‑94 (MQ=60)
                                                            ATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATT                               >  SRR4302543.6256714/1‑94 (MQ=60)
                                                            ATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATT                               >  SRR4302543.7034433/1‑94 (MQ=60)
                                                            ATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATT                               >  SRR4302543.1166458/1‑94 (MQ=60)
                                                            ATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATT                               >  SRR4302543.2608844/1‑94 (MQ=60)
                                                             TACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTA                              >  SRR4302543.5505177/1‑94 (MQ=60)
                                                             TACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTA                              <  SRR4302543.197089/94‑1 (MQ=60)
                                                              ACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTAT                             >  SRR4302543.5997946/1‑94 (MQ=60)
                                                              ACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTAT                             <  SRR4302543.5290045/94‑1 (MQ=60)
                                                               CCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGCTTATC                            >  SRR4302543.7943186/1‑94 (MQ=60)
                                                               CCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATC                            >  SRR4302543.3571777/1‑94 (MQ=60)
                                                               CCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATC                            <  SRR4302543.4611074/94‑1 (MQ=60)
                                                                CGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCG                           <  SRR4302543.602691/94‑1 (MQ=60)
                                                                CGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCG                           >  SRR4302543.7219858/1‑94 (MQ=60)
                                                                 GTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGG                          >  SRR4302543.2961060/1‑94 (MQ=60)
                                                                 GTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGG                          >  SRR4302543.3926854/1‑94 (MQ=60)
                                                                 GTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGG                          >  SRR4302543.4739802/1‑94 (MQ=60)
                                                                  TGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGG                         <  SRR4302543.2191473/94‑1 (MQ=60)
                                                                   GTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGA                        <  SRR4302543.169765/94‑1 (MQ=60)
                                                                    TGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAA                       >  SRR4302543.6673529/1‑94 (MQ=60)
                                                                    TGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAA                       <  SRR4302543.7490572/94‑1 (MQ=60)
                                                                     GTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAAT                      <  SRR4302543.6843665/94‑1 (MQ=60)
                                                                     GTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAAT                      <  SRR4302543.7663867/94‑1 (MQ=60)
                                                                     GTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAAT                      <  SRR4302543.440254/94‑1 (MQ=60)
                                                                     GTGAAACAACGTCCAGCTCGCCAACGTGGCGAGCCTCGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAAT                      <  SRR4302543.6195834/94‑1 (MQ=60)
                                                                      TGAAATATCGTCCAGCTCGCCAACGTGGCTGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATC                     >  SRR4302543.7475337/1‑94 (MQ=60)
                                                                      TGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATC                     <  SRR4302543.7468677/94‑1 (MQ=60)
                                                                      TGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATC                     >  SRR4302543.2136661/1‑94 (MQ=60)
                                                                      TGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATC                     <  SRR4302543.7218067/94‑1 (MQ=60)
                                                                       GAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCG                    >  SRR4302543.5848802/1‑94 (MQ=60)
                                                                         AATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGT                  >  SRR4302543.4932410/1‑94 (MQ=60)
                                                                          ATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTT                 >  SRR4302543.3452785/1‑94 (MQ=60)
                                                                          ATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTT                 >  SRR4302543.3452784/1‑94 (MQ=60)
                                                                          ATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTT                 >  SRR4302543.7507662/1‑94 (MQ=60)
                                                                          ATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTT                 <  SRR4302543.1589402/94‑1 (MQ=60)
                                                                          ATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTT                 <  SRR4302543.2035294/94‑1 (MQ=60)
                                                                           TATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCCCACCATAACGATTATCGGGAATCGGTTC                <  SRR4302543.6674998/94‑1 (MQ=60)
                                                                           AATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTC                <  SRR4302543.6674997/94‑1 (MQ=60)
                                                                            ATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCG               >  SRR4302543.4514401/1‑94 (MQ=60)
                                                                            ATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCG               <  SRR4302543.4686142/94‑1 (MQ=60)
                                                                               GTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTA            >  SRR4302543.4502268/1‑94 (MQ=60)
                                                                                 CCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAAC          <  SRR4302543.3803611/94‑1 (MQ=60)
                                                                                 CCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAAC          <  SRR4302543.1491711/94‑1 (MQ=60)
                                                                                 CCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAAC          <  SRR4302543.3178612/94‑1 (MQ=60)
                                                                                 CCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAAC          <  SRR4302543.1485501/94‑1 (MQ=60)
                                                                                 CCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCAACGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAAC          <  SRR4302543.2941523/94‑1 (MQ=60)
                                                                                  CAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACG         <  SRR4302543.1681165/94‑1 (MQ=60)
                                                                                  CAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACG         >  SRR4302543.1355857/1‑94 (MQ=60)
                                                                                  CAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACG         <  SRR4302543.4724352/94‑1 (MQ=60)
                                                                                   AGCCCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGC        <  SRR4302543.2424626/94‑1 (MQ=60)
                                                                                    GCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCT       >  SRR4302543.2878198/1‑94 (MQ=60)
                                                                                    GCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCT       <  SRR4302543.7517180/94‑1 (MQ=60)
                                                                                    GCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCT       <  SRR4302543.7952431/94‑1 (MQ=60)
                                                                                    GCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCT       <  SRR4302543.6725124/94‑1 (MQ=60)
                                                                                     CTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTG      <  SRR4302543.2090293/94‑1 (MQ=60)
                                                                                     CTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTG      <  SRR4302543.7296015/94‑1 (MQ=60)
                                                                                       CGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTGCC    <  SRR4302543.7253551/94‑1 (MQ=60)
                                                                                        GCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTGCCG   >  SRR4302543.5505399/1‑94 (MQ=60)
                                                                                         CCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTGCCGC  >  SRR4302543.3589553/1‑94 (MQ=60)
                                                                                         CCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTGCCGC  >  SRR4302543.7277887/1‑94 (MQ=60)
                                                                                         CCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTGCCGC  >  SRR4302543.5379553/1‑94 (MQ=60)
                                                                                             |                                                                                         
GAATCGGTGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAAGCTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTGCCGC  >  NC_000913/3166842‑3167024

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑