Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,185,776	T→C	F121L (TTC→CTC)	yqiG →	putative membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,185,776	0	T	C	99.7%	1082.9 / NA	337	F121L (TTC→CTC)	yqiG	putative membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (159/177); minor base A (1/0); total (160/177)
Fisher's exact test for biased strand distribution p-value = 4.75e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 351 total aligned reads displayed.

GGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGG  >  NC_000913/3185686‑3185865

ggATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTAtctc                                                                                         <  1:7182622/93‑1 (MQ=255)

   tttACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGAt                                                                                      >  2:781344/1‑93 (MQ=255)

     tACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATaa                                                                                    <  1:100300/93‑1 (MQ=255)

     tACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATaa                                                                                    <  1:5431511/93‑1 (MQ=255)

      aCTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATaaa                                                                                   >  1:3540527/1‑93 (MQ=255)

       cTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAg                                                                                  >  2:2208873/1‑93 (MQ=255)

       cTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAg                                                                                  <  2:7186145/93‑1 (MQ=255)

        tgatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAATAAGAAAAACAAATTACAACTTATCTCGATAAAgg                                                                                 >  2:3189600/1‑93 (MQ=255)

        tgatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAgg                                                                                 <  2:4221286/93‑1 (MQ=255)

        tgatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAgg                                                                                 >  1:4457818/1‑93 (MQ=255)

         gatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAggg                                                                                >  1:4758541/1‑93 (MQ=255)

         gatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAggg                                                                                <  1:3105032/93‑1 (MQ=255)

         gatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAggg                                                                                <  1:2591923/93‑1 (MQ=255)

         gatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAggg                                                                                >  2:6958025/1‑93 (MQ=255)

          atgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGa                                                                               <  2:3965578/93‑1 (MQ=255)

           tgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGaa                                                                              >  1:1334581/1‑93 (MQ=255)

            gaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGaaa                                                                             <  2:6531854/93‑1 (MQ=255)

             aaTTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGaaaa                                                                            <  2:6092918/93‑1 (MQ=255)

              aTTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAAt                                                                           >  2:7614906/1‑93 (MQ=255)

                 tATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCa                                                                        <  1:1938125/93‑1 (MQ=255)

                   ttGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAAt                                                                      >  1:7252099/1‑93 (MQ=255)

                    tGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAAtt                                                                     >  1:1054823/1‑93 (MQ=255)

                    tGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAAtt                                                                     >  1:7417049/1‑93 (MQ=255)

                     gAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTa                                                                    <  2:3274409/93‑1 (MQ=255)

                     gAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTa                                                                    <  2:167290/93‑1 (MQ=255)

                     gAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTa                                                                    >  2:5849769/1‑93 (MQ=255)

                     gAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTa                                                                    <  1:5249399/93‑1 (MQ=255)

                     gAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTa                                                                    >  2:4111118/1‑93 (MQ=255)

                      aaaaaaCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTAt                                                                   <  2:5556792/93‑1 (MQ=255)

                       aaaaaCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATc                                                                  <  2:4473770/93‑1 (MQ=255)

                         aaaCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCa                                                                <  2:7481941/93‑1 (MQ=255)

                          aaCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCat                                                               >  2:2300786/1‑93 (MQ=255)

                          aaCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCat                                                               >  1:4687375/1‑93 (MQ=255)

                           aCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCata                                                              <  1:7542260/93‑1 (MQ=255)

                             tCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGCTAAAGGGAAAATGCAATTATCCatatc                                                            >  1:6899652/1‑92 (MQ=255)

                             tCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCatatc                                                            <  1:4036330/93‑2 (MQ=255)

                              cAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCatatct                                                           <  2:6001945/93‑3 (MQ=255)

                              cAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCatatct                                                           <  1:833885/93‑3 (MQ=255)

                                   aaaCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCAcc                                                      >  1:6301524/1‑93 (MQ=255)

                                     aCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTc                                                    <  2:5166677/93‑1 (MQ=255)

                                     aCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTc                                                    >  1:5858360/1‑93 (MQ=255)

                                     aCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTc                                                    <  1:6711905/93‑1 (MQ=255)

                                      ccTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACACCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCCCCTCa                                                   <  1:1117601/93‑1 (MQ=255)

                                      ccTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCa                                                   >  2:2727729/1‑93 (MQ=255)

                                      ccTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCa                                                   <  2:4530525/93‑1 (MQ=255)

                                       cTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAg                                                  <  1:1246889/93‑1 (MQ=255)

                                        tGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAgg                                                 >  2:1007648/1‑93 (MQ=255)

                                         gATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACCACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGc                                                >  2:6577704/1‑93 (MQ=255)

                                         gATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGc                                                <  2:1866352/93‑1 (MQ=255)

                                         gATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGc                                                >  2:1304852/1‑93 (MQ=255)

                                          aTCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCa                                               <  2:3703706/93‑1 (MQ=255)

                                          aTCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCa                                               <  2:5354387/93‑1 (MQ=255)

                                          aTCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCa                                               <  1:5937274/93‑1 (MQ=255)

                                          aTCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCa                                               <  1:4853112/93‑1 (MQ=255)

                                            cGATGGTTCGTTCCCTATCAAAAAATAAAAACAAATTACAACTTAGCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATg                                             <  1:2473482/93‑1 (MQ=255)

                                             gATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATgg                                            <  2:4927302/93‑1 (MQ=255)

                                               tGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGtt                                          <  1:180415/93‑1 (MQ=255)

                                               tGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGtt                                          >  1:6464895/1‑93 (MQ=255)

                                                ggTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTa                                         <  1:2366190/93‑1 (MQ=255)

                                                ggTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTa                                         >  1:5103840/1‑93 (MQ=255)

                                                  ttgttACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTaaa                                       >  1:4940022/1‑93 (MQ=255)

                                                  ttgttACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTaaa                                       <  2:31032/93‑1 (MQ=255)

                                                      tACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATAc                                   <  2:5429354/93‑1 (MQ=255)

                                                       aCCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACa                                  <  1:1594781/93‑1 (MQ=255)

                                                        cccTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACaa                                 >  2:3391974/1‑93 (MQ=255)

                                                         ccTATCGAAAAAGAAGAACAAATTGCGCCGTCCCGCGCTAAAGGGAAAAGGCAATTATCCATATCTGCATCTCAGGCATGGTTAAAATACaaa                                <  1:6958787/93‑1 (MQ=255)

                                                         ccTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACaaa                                <  2:743496/93‑1 (MQ=255)

                                                          cTATCGAAAAAGAAAAACAAATTACAGCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAg                               <  1:3314211/93‑1 (MQ=255)

                                                          cTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAg                               <  2:3080896/93‑1 (MQ=255)

                                                          cTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAg                               >  2:961115/1‑93 (MQ=255)

                                                            aTCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGAt                             >  2:1947140/1‑93 (MQ=255)

                                                               gaaaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCa                          >  1:2951564/1‑93 (MQ=255)

                                                                aaaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCaa                         >  1:5542841/1‑93 (MQ=255)

                                                                aaaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCaa                         >  2:1544847/1‑93 (MQ=255)

                                                                 aaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCaaa                        <  1:3761927/93‑1 (MQ=255)

                                                                 aaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCaaa                        <  1:6116894/93‑1 (MQ=255)

                                                                  aaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAc                       <  2:141858/93‑1 (MQ=255)

                                                                   aagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACt                      <  2:5120197/93‑1 (MQ=255)

                                                                   aagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACt                      >  2:4423274/1‑93 (MQ=255)

                                                                   aagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACt                      <  1:3345382/93‑1 (MQ=255)

                                                                      aaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCGTATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGa                   <  1:1877360/93‑1 (MQ=255)

                                                                      aaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAGGATGCAAACTGGa                   <  2:2918257/93‑1 (MQ=255)

                                                                      aaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGa                   <  1:828865/93‑1 (MQ=255)

                                                                      aaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGa                   >  1:7867944/1‑93 (MQ=255)

                                                                      aaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGa                   >  2:2638404/1‑93 (MQ=255)

                                                                       aaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAc                  >  2:297543/1‑93 (MQ=255)

                                                                        aaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACg                 >  2:4765846/1‑93 (MQ=255)

                                                                        aaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACg                 >  2:3780411/1‑93 (MQ=255)

                                                                        aaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACg                 <  2:2520237/93‑1 (MQ=255)

                                                                          aCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcc               <  2:5879270/93‑1 (MQ=255)

                                                                            aaaTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctc             >  1:7439114/1‑93 (MQ=255)

                                                                             aaTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTTAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctcc            >  2:117184/1‑93 (MQ=255)

                                                                             aaTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctcc            <  1:4180535/93‑1 (MQ=255)

                                                                             aaTTACAAACTATCTCCATAAAGGGAAAATGCAATTATCCATGTCTGCACCTCAGGCATGGTTAAAATCCAAAGATGCAAACTGGACGcctcc            <  1:4628326/93‑1 (MQ=255)

                                                                              aTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctcct           <  2:6707641/93‑1 (MQ=255)

                                                                              aTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctcct           >  2:4668860/1‑93 (MQ=255)

                                                                                    aCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACtt     >  2:6406393/1‑93 (MQ=255)

                                                                                    aCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACtt     >  2:568776/1‑93 (MQ=255)

                                                                                     cTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACttt    <  1:1544848/93‑1 (MQ=255)

                                                                                      ttATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTg   <  1:2734781/93‑1 (MQ=255)

GGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGG  >  NC_000913/3185686‑3185865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATC  >  NC_000913/3185684‑3185869

TAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCT                                                                                              <  SRR4302543.2020092/94‑1 (MQ=60)

TAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCT                                                                                              <  SRR4302543.4929958/94‑1 (MQ=60)

  GGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCG                                                                                            <  SRR4302543.259828/94‑1 (MQ=60)

  GGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCG                                                                                            <  SRR4302543.1809207/94‑1 (MQ=60)

  GGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCG                                                                                            <  SRR4302543.7252325/94‑1 (MQ=60)

      TTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAA                                                                                        <  SRR4302543.3259115/94‑1 (MQ=60)

      TTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAA                                                                                        >  SRR4302543.4378041/1‑94 (MQ=60)

      TTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAA                                                                                        >  SRR4302543.1105663/1‑94 (MQ=60)

      TTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAA                                                                                        >  SRR4302543.5305672/1‑94 (MQ=60)

       TACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAA                                                                                       <  SRR4302543.101234/94‑1 (MQ=60)

       TACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAA                                                                                       >  SRR4302543.3571995/1‑94 (MQ=60)

       TACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAA                                                                                       >  SRR4302543.4808781/1‑94 (MQ=60)

       TACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAA                                                                                       <  SRR4302543.5480861/94‑1 (MQ=60)

       TAATGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATGGAAAAAGAAAAAAAAATTAAATCTTATCTCGATAAA                                                                                       >  SRR4302543.6011864/1‑94 (MQ=60)

        ACTGCTGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAAAAAATTACAAATTATCTCGATAAAC                                                                                      >  SRR4302543.2704937/1‑94 (MQ=60)

         CTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGG                                                                                     >  SRR4302543.4498215/1‑94 (MQ=60)

         CTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGG                                                                                     <  SRR4302543.1241481/94‑1 (MQ=60)

         CTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGG                                                                                     <  SRR4302543.7974964/94‑1 (MQ=60)

         CTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGG                                                                                     <  SRR4302543.3350140/94‑1 (MQ=60)

          TGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGG                                                                                    <  SRR4302543.159533/94‑1 (MQ=60)

          TGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGG                                                                                    <  SRR4302543.159534/94‑1 (MQ=60)

          TGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGG                                                                                    >  SRR4302543.4674622/1‑94 (MQ=60)

          TGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGG                                                                                    <  SRR4302543.2104277/94‑1 (MQ=60)

          TGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGG                                                                                    >  SRR4302543.4802023/1‑94 (MQ=60)

           GATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGA                                                                                   <  SRR4302543.3898596/94‑1 (MQ=60)

           GATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGA                                                                                   <  SRR4302543.2615476/94‑1 (MQ=60)

           GATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGA                                                                                   <  SRR4302543.3132963/94‑1 (MQ=60)

            ATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAGAAACAAATTACAACTTATCTCGATAAAGGGAA                                                                                  >  SRR4302543.51462/1‑94 (MQ=60)

            ATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAA                                                                                  >  SRR4302543.1346477/1‑94 (MQ=60)

                ATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATG                                                                              >  SRR4302543.7542082/1‑94 (MQ=60)

                ATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATG                                                                              >  SRR4302543.507898/1‑94 (MQ=60)

                 TTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGC                                                                             <  SRR4302543.623301/94‑1 (MQ=60)

                  TTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCA                                                                            <  SRR4302543.2452941/94‑1 (MQ=60)

                   TATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAA                                                                           <  SRR4302543.2813893/94‑1 (MQ=60)

                   TATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAA                                                                           >  SRR4302543.1904976/1‑94 (MQ=60)

                   TATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAA                                                                           <  SRR4302543.1955539/94‑1 (MQ=60)

                   TATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAA                                                                           >  SRR4302543.6483388/1‑94 (MQ=60)

                    ATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAAT                                                                          >  SRR4302543.4956412/1‑94 (MQ=60)

                    ATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAAT                                                                          >  SRR4302543.7322227/1‑94 (MQ=60)

                     TTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATT                                                                         >  SRR4302543.7488201/1‑94 (MQ=60)

                     TTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATT                                                                         >  SRR4302543.1064288/1‑94 (MQ=60)

                     TTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAAC‑TATCTCGATAAAGGGAAAATGCAATTA                                                                        <  SRR4302543.4717485/94‑1 (MQ=60)

                      TGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTA                                                                        >  SRR4302543.3747005/1‑94 (MQ=60)

                       GAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTAT                                                                       >  SRR4302543.3030049/1‑94 (MQ=60)

                       GAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTAT                                                                       <  SRR4302543.4571935/94‑1 (MQ=60)

                       GAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTAT                                                                       <  SRR4302543.5296721/94‑1 (MQ=60)

                       GAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTACCTCGATAAAGGGAAAATGCAATTAT                                                                       <  SRR4302543.7650923/94‑1 (MQ=60)

                         AAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCC                                                                     >  SRR4302543.4801942/1‑94 (MQ=60)

                           AAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCAT                                                                   <  SRR4302543.4025068/94‑1 (MQ=60)

                           AAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCAT                                                                   >  SRR4302543.4730147/1‑94 (MQ=60)

                             ACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATAT                                                                 <  SRR4302543.7614136/94‑1 (MQ=60)

                              CTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGCTAAAGGGAAAATGCAATTATCCATATC                                                                >  SRR4302543.6964491/1‑94 (MQ=60)

                              CTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATC                                                                <  SRR4302543.995744/94‑1 (MQ=60)

                               TCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCT                                                               <  SRR4302543.4295343/94‑1 (MQ=60)

                               TCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCT                                                               <  SRR4302543.6390897/94‑1 (MQ=60)

                               TCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCT                                                               <  SRR4302543.4072439/94‑1 (MQ=60)

                               TCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCT                                                               <  SRR4302543.3416665/94‑1 (MQ=60)

                                CAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTG                                                              <  SRR4302543.841240/94‑1 (MQ=60)

                                CAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTG                                                              >  SRR4302543.6978679/1‑94 (MQ=60)

                                CAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTG                                                              <  SRR4302543.841239/94‑1 (MQ=60)

                                 AGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGC                                                             <  SRR4302543.5292935/94‑1 (MQ=60)

                                    AAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACC                                                          >  SRR4302543.1387807/1‑94 (MQ=60)

                                    AAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACC                                                          >  SRR4302543.6360817/1‑94 (MQ=60)

                                     AAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCT                                                         >  SRR4302543.7182477/1‑94 (MQ=60)

                                     AAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCT                                                         <  SRR4302543.2308672/94‑1 (MQ=60)

                                      AACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTC                                                        >  SRR4302543.5911689/1‑94 (MQ=60)

                                      AACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTC                                                        >  SRR4302543.666898/1‑94 (MQ=60)

                                       ACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCA                                                       >  SRR4302543.2447982/1‑94 (MQ=60)

                                       ACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCA                                                       <  SRR4302543.6775315/94‑1 (MQ=60)

                                       ACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCACATCTGCACCTCA                                                       >  SRR4302543.7075485/1‑94 (MQ=60)

                                        CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACACCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCCCCTCAG                                                      <  SRR4302543.1127723/94‑1 (MQ=60)

                                        CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAG                                                      >  SRR4302543.5826543/1‑94 (MQ=60)

                                        CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAG                                                      >  SRR4302543.3094600/1‑94 (MQ=60)

                                        CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAG                                                      >  SRR4302543.2916279/1‑94 (MQ=60)

                                        CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAG                                                      <  SRR4302543.6441088/94‑1 (MQ=60)

                                        CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAG                                                      >  SRR4302543.6838779/1‑94 (MQ=60)

                                        CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGAACCTCAG                                                      >  SRR4302543.2916278/1‑94 (MQ=60)

                                         CTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGG                                                     >  SRR4302543.349419/1‑94 (MQ=60)

                                         CTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGG                                                     <  SRR4302543.1258083/94‑1 (MQ=60)

                                          TGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGC                                                    <  SRR4302543.1090031/94‑1 (MQ=60)

                                          TGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGC                                                    >  SRR4302543.2747265/1‑94 (MQ=60)

                                          TGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGC                                                    >  SRR4302543.7569055/1‑94 (MQ=60)

                                           GATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCA                                                   >  SRR4302543.7611857/1‑94 (MQ=60)

                                            ATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAT                                                  <  SRR4302543.5991590/94‑1 (MQ=60)

                                            ATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAT                                                  <  SRR4302543.4897366/94‑1 (MQ=60)

                                            ATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAT                                                  <  SRR4302543.3462697/94‑1 (MQ=60)

                                            ATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATATCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAT                                                  >  SRR4302543.3191097/1‑94 (MQ=60)

                                              agaaggtgtttagCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAAGGCAATTATCCATATCTGCACCTCAGGCATGG                                                <  SRR4302543.2495833/81‑1 (MQ=60)

                                              CGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGG                                                <  SRR4302543.138224/94‑1 (MQ=60)

                                              CGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGG                                                <  SRR4302543.1302113/94‑1 (MQ=60)

                                              CGATGGTTCGTTCCCTATCAAAAAATAAAAACAAATTACAACTTAGCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGG                                                <  SRR4302543.2495830/94‑1 (MQ=60)

                                               GATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGT                                               <  SRR4302543.2602389/94‑1 (MQ=60)

                                               GATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGT                                               <  SRR4302543.1897540/94‑1 (MQ=60)

                                                ATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTT                                              >  SRR4302543.6525804/1‑94 (MQ=60)

                                                ATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTT                                              >  SRR4302543.7259894/1‑94 (MQ=60)

                                                ATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTT                                              >  SRR4302543.7269900/1‑94 (MQ=60)

                                                 TGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTA                                             <  SRR4302543.181954/94‑1 (MQ=60)

                                                 TGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTA                                             >  SRR4302543.5150033/1‑94 (MQ=60)

                                                  GGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAA                                            <  SRR4302543.2387647/94‑1 (MQ=60)

                                                   GTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAA                                           >  SRR4302543.4985006/1‑94 (MQ=60)

                                                    TTGTTACCCTATCGAAAAAGAAAACCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAA                                          <  SRR4302543.4845417/94‑1 (MQ=60)

                                                    TTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAA                                          <  SRR4302543.4845415/94‑1 (MQ=60)

                                                     TGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAAT                                         >  SRR4302543.837757/1‑94 (MQ=60)

                                                     TGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAAT                                         >  SRR4302543.1036847/1‑94 (MQ=60)

                                                     TGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAAT                                         <  SRR4302543.1585810/94‑1 (MQ=60)

                                                      GTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATA                                        >  SRR4302543.1054477/1‑94 (MQ=60)

                                                      GTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATA                                        >  SRR4302543.7995015/1‑94 (MQ=60)

                                                       TTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATAC                                       <  SRR4302543.6083346/94‑1 (MQ=60)

                                                         ACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAA                                     <  SRR4302543.1609011/94‑1 (MQ=60)

                                                          CCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAA                                    >  SRR4302543.7952025/1‑94 (MQ=60)

                                                          CCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAA                                    <  SRR4302543.2581058/94‑1 (MQ=60)

                                                          CCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAA                                    >  SRR4302543.5940423/1‑94 (MQ=60)

                                                          CCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAA                                    >  SRR4302543.185903/1‑94 (MQ=60)

                                                           CCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAG                                   <  SRR4302543.7024263/94‑1 (MQ=60)

                                                            CTATCGAAAAAGAAAAACAAATTACAGCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                  <  SRR4302543.3344124/94‑1 (MQ=60)

                                                            CTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                  <  SRR4302543.1286424/94‑1 (MQ=60)

                                                            CTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                  >  SRR4302543.570739/1‑94 (MQ=60)

                                                            CTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                  >  SRR4302543.6799414/1‑94 (MQ=60)

                                                            CTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                  >  SRR4302543.4685678/1‑94 (MQ=60)

                                                            CTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                  <  SRR4302543.3344324/94‑1 (MQ=60)

                                                             TATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGAT                                 <  SRR4302543.6585460/94‑1 (MQ=60)

                                                             TATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGAT                                 <  SRR4302543.1117019/94‑1 (MQ=60)

                                                               TCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGC                               <  SRR4302543.3871568/94‑1 (MQ=60)

                                                               TCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGC                               <  SRR4302543.4187351/94‑1 (MQ=60)

                                                               TCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGC                               <  SRR4302543.4187352/94‑1 (MQ=60)

                                                                CGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCA                              >  SRR4302543.2978362/1‑94 (MQ=60)

                                                                CGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCA                              >  SRR4302543.6923867/1‑94 (MQ=60)

                                                                 GAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAA                             >  SRR4302543.5593238/1‑94 (MQ=60)

                                                                 GAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAA                             <  SRR4302543.5083801/94‑1 (MQ=60)

                                                                  AAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAA                            >  SRR4302543.6053785/1‑94 (MQ=60)

                                                                   AAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAC                           <  SRR4302543.6174835/94‑1 (MQ=60)

                                                                   AAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAC                           >  SRR4302543.7446536/1‑94 (MQ=60)

                                                                   AAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAC                           <  SRR4302543.3795036/94‑1 (MQ=60)

                                                                   AAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAC                           <  SRR4302543.5873756/94‑1 (MQ=60)

                                                                    AAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACT                          <  SRR4302543.731772/94‑1 (MQ=60)

                                                                     AAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTG                         <  SRR4302543.749952/94‑1 (MQ=60)

                                                                     AAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTG                         <  SRR4302543.5960787/94‑1 (MQ=60)

                                                                     AAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTG                         <  SRR4302543.1191791/94‑1 (MQ=60)

                                                                     AAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTG                         <  SRR4302543.3375503/94‑1 (MQ=60)

                                                                       GAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGA                       >  SRR4302543.7942029/1‑94 (MQ=60)

                                                                       GAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGA                       <  SRR4302543.4574530/94‑1 (MQ=60)

                                                                        AAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCGTATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAC                      <  SRR4302543.1894227/94‑1 (MQ=60)

                                                                        AAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAC                      <  SRR4302543.836172/94‑1 (MQ=60)

                                                                         AAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACG                     <  SRR4302543.4278359/94‑1 (MQ=60)

                                                                            ACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCT                  <  SRR4302543.5214355/94‑1 (MQ=60)

                                                                            ACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCT                  >  SRR4302543.7730471/1‑94 (MQ=60)

                                                                            ACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCT                  <  SRR4302543.4796027/94‑1 (MQ=60)

                                                                             CAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTC                 >  SRR4302543.7510416/1‑94 (MQ=60)

                                                                             CAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTC                 >  SRR4302543.5558482/1‑94 (MQ=60)

                                                                             CAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTC                 >  SRR4302543.5558481/1‑94 (MQ=60)

                                                                               AATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCT               <  SRR4302543.699667/94‑1 (MQ=60)

                                                                               AATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCT               <  SRR4302543.4218418/94‑1 (MQ=60)

                                                                               AATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCT               <  SRR4302543.3774999/94‑1 (MQ=60)

                                                                               AATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCT               <  SRR4302543.4946975/94‑1 (MQ=60)

                                                                               AATTACAAACTATCTCCATAAAGGGAAAATGCAATTATCCATGTCTGCACCTCAGGCATGGTTAAAATCCAAAGATGCAAACTGGACGCCTCCT               <  SRR4302543.4670387/94‑1 (MQ=60)

                                                                                ATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTG              >  SRR4302543.7509376/1‑94 (MQ=60)

                                                                                ATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTG              <  SRR4302543.5317693/94‑1 (MQ=60)

                                                                                 TTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGA             >  SRR4302543.2251337/1‑94 (MQ=60)

                                                                                  TACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAA            >  SRR4302543.7347409/1‑94 (MQ=60)

                                                                                   ACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAAC           >  SRR4302543.1853510/1‑94 (MQ=60)

                                                                                    CAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACT          >  SRR4302543.1852066/1‑94 (MQ=60)

                                                                                    CAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACT          >  SRR4302543.3162496/1‑94 (MQ=60)

                                                                                     AACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTT         <  SRR4302543.5310152/94‑1 (MQ=60)

                                                                                     AACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTT         >  SRR4302543.1777528/1‑94 (MQ=60)

                                                                                     AACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTT         <  SRR4302543.95021/94‑1 (MQ=60)

                                                                                       CTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTG       >  SRR4302543.6191563/1‑94 (MQ=60)

                                                                                       CTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTG       <  SRR4302543.1558680/94‑1 (MQ=60)

                                                                                        TTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGG      <  SRR4302543.2759663/94‑1 (MQ=60)

                                                                                         TATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGA     >  SRR4302543.3467673/1‑94 (MQ=60)

                                                                                         TATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGA     >  SRR4302543.3354965/1‑94 (MQ=60)

                                                                                           TCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAAT   <  SRR4302543.1983522/94‑1 (MQ=60)

                                                                                            CTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATC  >  SRR4302543.7694841/1‑94 (MQ=60)

                                                                                            CTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATC  >  SRR4302543.5727328/1‑94 (MQ=60)

                                                                                            CTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATC  <  SRR4302543.1000988/94‑1 (MQ=60)

TAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATC  >  NC_000913/3185684‑3185869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`