Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,185,807	T→C	F131S (TTT→TCT)	yqiG →	putative membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,185,807	0	T	C	100.0%	1121.8 / NA	346	F131S (TTT→TCT)	yqiG	putative membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (178/168); total (178/168)

Only 100 of 350 total aligned reads displayed.

AGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACT  >  NC_000913/3185717‑3185896

 gCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGc                                                                                        >  2:4035997/1‑93 (MQ=255)

    aaaCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCAcc                                                                                     >  1:6301524/1‑93 (MQ=255)

    aaaCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCAcc                                                                                     <  1:2287784/93‑1 (MQ=255)

      aCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTc                                                                                   <  2:5409955/93‑1 (MQ=255)

      aCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTc                                                                                   <  2:5439760/93‑1 (MQ=255)

       ccTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACACCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCCCCTCa                                                                                  <  1:1117601/93‑1 (MQ=255)

       ccTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCa                                                                                  <  2:4530525/93‑1 (MQ=255)

        cTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAg                                                                                 <  2:7488071/93‑1 (MQ=255)

        cTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAg                                                                                 >  1:5773986/1‑93 (MQ=255)

         tGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAgg                                                                                >  2:479501/1‑93 (MQ=255)

          gATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGc                                                                               >  1:2722510/1‑93 (MQ=255)

          gATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGc                                                                               >  2:1304852/1‑93 (MQ=255)

           aTCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCa                                                                              >  1:7539989/1‑93 (MQ=255)

              gATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATgg                                                                           <  1:1880642/93‑1 (MQ=255)

                tGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGtt                                                                         >  2:6032133/1‑93 (MQ=255)

                tGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGtt                                                                         >  2:4354618/1‑93 (MQ=255)

                tGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGtt                                                                         >  1:7190156/1‑93 (MQ=255)

                 ggTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTa                                                                        <  2:6555443/93‑1 (MQ=255)

                 ggTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTa                                                                        >  1:5103840/1‑93 (MQ=255)

                   ttgttACCCTATCGAAAAAGAAAACCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTaaa                                                                      <  1:4801535/93‑1 (MQ=255)

                   ttgttACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTaaa                                                                      <  2:31032/93‑1 (MQ=255)

                   ttgttACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTaaa                                                                      >  1:4940022/1‑93 (MQ=255)

                      ttACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATa                                                                   >  1:1045137/1‑93 (MQ=255)

                      ttACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATa                                                                   >  1:7920614/1‑93 (MQ=255)

                      ttACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATa                                                                   >  2:2093884/1‑93 (MQ=255)

                         cccTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACaa                                                                >  2:6116894/1‑93 (MQ=255)

                         cccTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACaa                                                                >  2:6682795/1‑93 (MQ=255)

                          ccTATCGAAAAAGAAGAACAAATTGCGCCGTCCCGCGCTAAAGGGAAAAGGCAATTATCCATATCTGCATCTCAGGCATGGTTAAAATACaaa                                                               <  1:6958787/93‑1 (MQ=255)

                          ccTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACaaa                                                               <  2:1625307/93‑1 (MQ=255)

                          ccTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACaaa                                                               >  1:5886763/1‑93 (MQ=255)

                           cTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAg                                                              <  1:3314410/93‑1 (MQ=255)

                           cTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAg                                                              <  1:1275046/93‑1 (MQ=255)

                            tATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGa                                                             >  1:4643436/1‑93 (MQ=255)

                            tATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGa                                                             >  2:6825685/1‑93 (MQ=255)

                            tATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGa                                                             <  1:6524027/93‑1 (MQ=255)

                                gaaaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCa                                                         >  1:6859211/1‑93 (MQ=255)

                                 aaaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCaa                                                        >  2:1544847/1‑93 (MQ=255)

                                  aaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCaaa                                                       <  2:1251837/93‑1 (MQ=255)

                                  aaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCaaa                                                       <  1:3761927/93‑1 (MQ=255)

                                   aaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAc                                                      >  1:7375635/1‑93 (MQ=255)

                                   aaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAc                                                      <  2:141858/93‑1 (MQ=255)

                                   aaagaaaaaCAAATGACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAc                                                      <  2:1779997/93‑1 (MQ=255)

                                    aagaaaaaCAAATTACAACTTATCTCGATACAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACt                                                     <  2:5120198/93‑1 (MQ=255)

                                    aagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACt                                                     <  2:2857685/93‑1 (MQ=255)

                                    aagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACt                                                     <  1:3345382/93‑1 (MQ=255)

                                     agaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTg                                                    >  2:4239873/1‑93 (MQ=255)

                                     agaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTg                                                    <  2:7608604/93‑1 (MQ=255)

                                       aaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGa                                                  >  1:7867944/1‑93 (MQ=255)

                                        aaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAc                                                 <  2:7315076/93‑1 (MQ=255)

                                        aaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAc                                                 >  2:5227488/1‑93 (MQ=255)

                                         aaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACg                                                >  2:3780411/1‑93 (MQ=255)

                                          aaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGc                                               >  2:254533/1‑93 (MQ=255)

                                          aaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGc                                               >  2:4462538/1‑93 (MQ=255)

                                            cAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcct                                             >  1:7657878/1‑93 (MQ=255)

                                             aaaTTACAACTTATCTCGATAAAGGGAAAATGCAGTTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctc                                            >  2:4955782/1‑93 (MQ=255)

                                             aaaTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctc                                            >  1:5508471/1‑93 (MQ=255)

                                              aaTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctcc                                           <  1:4180535/93‑1 (MQ=255)

                                              aaTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctcc                                           <  2:4742865/93‑1 (MQ=255)

                                               aTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctcct                                          <  1:5270147/93‑1 (MQ=255)

                                                ttACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTg                                         >  1:7438078/1‑93 (MQ=255)

                                                    aaCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACt                                     >  1:1835539/1‑93 (MQ=255)

                                                    aaCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACt                                     <  1:94145/93‑1 (MQ=255)

                                                    aaCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACt                                     >  1:3134303/1‑93 (MQ=255)

                                                     aCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACtt                                    >  2:568776/1‑93 (MQ=255)

                                                     aCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACtt                                    >  1:1761781/1‑93 (MQ=255)

                                                      cTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACttt                                   <  1:1544848/93‑1 (MQ=255)

                                                            tCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATc                             >  2:3714680/1‑93 (MQ=255)

                                                            tCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATc                             >  2:7798780/1‑93 (MQ=255)

                                                              gATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCAt                           >  1:2472870/1‑93 (MQ=255)

                                                              gATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCAt                           >  2:3604254/1‑93 (MQ=255)

                                                               aTAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATg                          <  2:157483/93‑1 (MQ=255)

                                                                tAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCTTGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATgg                         <  1:4460304/93‑1 (MQ=255)

                                                                tAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATgg                         <  1:6381038/93‑1 (MQ=255)

                                                                 aaaGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGt                        >  2:6267188/1‑93 (MQ=255)

                                                                  aaGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTa                       <  2:3286800/93‑1 (MQ=255)

                                                                  aaGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTa                       >  1:6690331/1‑93 (MQ=255)

                                                                  aaGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTa                       <  2:5912666/93‑1 (MQ=255)

                                                                  aaGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTa                       <  1:2874606/93‑1 (MQ=255)

                                                                    gggAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAtt                     <  2:1059336/93‑1 (MQ=255)

                                                                    gggAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAtt                     <  2:29564/93‑1 (MQ=255)

                                                                     ggAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTg                    >  1:2948080/1‑93 (MQ=255)

                                                                      gAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGc                   >  2:7241183/1‑93 (MQ=255)

                                                                      gAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGc                   >  1:2226813/1‑93 (MQ=255)

                                                                       aaaaTGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCt                  >  2:829300/1‑93 (MQ=255)

                                                                       aaaaTGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCt                  >  1:151352/1‑93 (MQ=255)

                                                                        aaaTGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTg                 >  2:2309528/1‑93 (MQ=255)

                                                                        aaaTGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTg                 >  1:7116875/1‑93 (MQ=255)

                                                                         aaTGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTgg                <  1:6024157/93‑1 (MQ=255)

                                                                          aTGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTggg               >  1:1001197/1‑93 (MQ=255)

                                                                          aTGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTggg               >  1:5621924/1‑93 (MQ=255)

                                                                          aTGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTggg               <  2:1938500/93‑1 (MQ=255)

                                                                              aaTTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCAt           >  2:7123427/1‑93 (MQ=255)

                                                                              aaTTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCAt           >  1:3620439/1‑93 (MQ=255)

                                                                              aaTTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCAt           >  2:2453164/1‑93 (MQ=255)

                                                                               aTTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCAtt          <  1:5228279/93‑1 (MQ=255)

                                                                                ttATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCAttt         >  1:5939188/1‑93 (MQ=255)

                                                                                 tATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTc        <  2:5833200/93‑1 (MQ=255)

                                                                                 tATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTc        <  2:2667065/93‑1 (MQ=255)

                                                                                  aTCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCt       <  2:5154647/93‑1 (MQ=255)

                                                                                     cATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGa    >  2:3229249/1‑93 (MQ=255)

AGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACT  >  NC_000913/3185717‑3185896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTACAA  >  NC_000913/3185714‑3185900

CTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGCTAAAGGGAAAATGCAATTATCCATATC                                                                                               >  SRR4302543.6964491/1‑94 (MQ=60)

CTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATC                                                                                               <  SRR4302543.995744/94‑1 (MQ=60)

 TCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCT                                                                                              <  SRR4302543.3416665/94‑1 (MQ=60)

 TCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCT                                                                                              <  SRR4302543.4072439/94‑1 (MQ=60)

 TCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCT                                                                                              <  SRR4302543.4295343/94‑1 (MQ=60)

 TCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCT                                                                                              <  SRR4302543.6390897/94‑1 (MQ=60)

  CAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTG                                                                                             <  SRR4302543.841240/94‑1 (MQ=60)

  CAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTG                                                                                             <  SRR4302543.841239/94‑1 (MQ=60)

  CAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTG                                                                                             >  SRR4302543.6978679/1‑94 (MQ=60)

   AGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGC                                                                                            <  SRR4302543.5292935/94‑1 (MQ=60)

      AAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACC                                                                                         >  SRR4302543.6360817/1‑94 (MQ=60)

      AAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACC                                                                                         >  SRR4302543.1387807/1‑94 (MQ=60)

       AAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCT                                                                                        <  SRR4302543.2308672/94‑1 (MQ=60)

       AAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCT                                                                                        >  SRR4302543.7182477/1‑94 (MQ=60)

        AACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTC                                                                                       >  SRR4302543.666898/1‑94 (MQ=60)

        AACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTC                                                                                       >  SRR4302543.5911689/1‑94 (MQ=60)

         ACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCA                                                                                      <  SRR4302543.6775315/94‑1 (MQ=60)

         ACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCA                                                                                      >  SRR4302543.2447982/1‑94 (MQ=60)

         ACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCACATCTGCACCTCA                                                                                      >  SRR4302543.7075485/1‑94 (MQ=60)

          CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACACCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCCCCTCAG                                                                                     <  SRR4302543.1127723/94‑1 (MQ=60)

          CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAG                                                                                     >  SRR4302543.3094600/1‑94 (MQ=60)

          CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAG                                                                                     >  SRR4302543.2916279/1‑94 (MQ=60)

          CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAG                                                                                     >  SRR4302543.6838779/1‑94 (MQ=60)

          CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAG                                                                                     >  SRR4302543.5826543/1‑94 (MQ=60)

          CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAG                                                                                     <  SRR4302543.6441088/94‑1 (MQ=60)

          CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGAACCTCAG                                                                                     >  SRR4302543.2916278/1‑94 (MQ=60)

           CTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGG                                                                                    >  SRR4302543.349419/1‑94 (MQ=60)

           CTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGG                                                                                    <  SRR4302543.1258083/94‑1 (MQ=60)

            TGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGC                                                                                   >  SRR4302543.2747265/1‑94 (MQ=60)

            TGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGC                                                                                   >  SRR4302543.7569055/1‑94 (MQ=60)

            TGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGC                                                                                   <  SRR4302543.1090031/94‑1 (MQ=60)

             GATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCA                                                                                  >  SRR4302543.7611857/1‑94 (MQ=60)

              ATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAT                                                                                 <  SRR4302543.3462697/94‑1 (MQ=60)

              ATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAT                                                                                 <  SRR4302543.5991590/94‑1 (MQ=60)

              ATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAT                                                                                 <  SRR4302543.4897366/94‑1 (MQ=60)

              ATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATATCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAT                                                                                 >  SRR4302543.3191097/1‑94 (MQ=60)

                agaaggtgtttagCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAAGGCAATTATCCATATCTGCACCTCAGGCATGG                                                                               <  SRR4302543.2495833/81‑1 (MQ=60)

                CGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGG                                                                               <  SRR4302543.138224/94‑1 (MQ=60)

                CGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGG                                                                               <  SRR4302543.1302113/94‑1 (MQ=60)

                CGATGGTTCGTTCCCTATCAAAAAATAAAAACAAATTACAACTTAGCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGG                                                                               <  SRR4302543.2495830/94‑1 (MQ=60)

                 GATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGT                                                                              <  SRR4302543.2602389/94‑1 (MQ=60)

                 GATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGT                                                                              <  SRR4302543.1897540/94‑1 (MQ=60)

                  ATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTT                                                                             >  SRR4302543.6525804/1‑94 (MQ=60)

                  ATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTT                                                                             >  SRR4302543.7259894/1‑94 (MQ=60)

                  ATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTT                                                                             >  SRR4302543.7269900/1‑94 (MQ=60)

                   TGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTA                                                                            <  SRR4302543.181954/94‑1 (MQ=60)

                   TGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTA                                                                            >  SRR4302543.5150033/1‑94 (MQ=60)

                    GGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAA                                                                           <  SRR4302543.2387647/94‑1 (MQ=60)

                     GTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAA                                                                          >  SRR4302543.4985006/1‑94 (MQ=60)

                      TTGTTACCCTATCGAAAAAGAAAACCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAA                                                                         <  SRR4302543.4845417/94‑1 (MQ=60)

                      TTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAA                                                                         <  SRR4302543.4845415/94‑1 (MQ=60)

                       TGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAAT                                                                        <  SRR4302543.1585810/94‑1 (MQ=60)

                       TGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAAT                                                                        >  SRR4302543.1036847/1‑94 (MQ=60)

                       TGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAAT                                                                        >  SRR4302543.837757/1‑94 (MQ=60)

                        GTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATA                                                                       >  SRR4302543.7995015/1‑94 (MQ=60)

                        GTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATA                                                                       >  SRR4302543.1054477/1‑94 (MQ=60)

                         TTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATAC                                                                      <  SRR4302543.6083346/94‑1 (MQ=60)

                           ACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAA                                                                    <  SRR4302543.1609011/94‑1 (MQ=60)

                            CCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAA                                                                   >  SRR4302543.185903/1‑94 (MQ=60)

                            CCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAA                                                                   <  SRR4302543.2581058/94‑1 (MQ=60)

                            CCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAA                                                                   >  SRR4302543.7952025/1‑94 (MQ=60)

                            CCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAA                                                                   >  SRR4302543.5940423/1‑94 (MQ=60)

                             cctatcgaaaaagaagaacaaattgcgccgtcccgcgcTAAAGGGAAAAGGCAATTATCCATATCTGCATCTCAGGCATGGTTAAAATACAAAG                                                                  <  SRR4302543.7024262/56‑1 (MQ=59)

                             CCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAG                                                                  <  SRR4302543.7024263/94‑1 (MQ=60)

                              CTATCGAAAAAGAAAAACAAATTACAGCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                                                 <  SRR4302543.3344124/94‑1 (MQ=60)

                              CTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                                                 >  SRR4302543.4685678/1‑94 (MQ=60)

                              CTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                                                 >  SRR4302543.6799414/1‑94 (MQ=60)

                              CTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                                                 >  SRR4302543.570739/1‑94 (MQ=60)

                              CTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                                                 <  SRR4302543.1286424/94‑1 (MQ=60)

                              CTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                                                 <  SRR4302543.3344324/94‑1 (MQ=60)

                               TATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGAT                                                                <  SRR4302543.1117019/94‑1 (MQ=60)

                               TATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGAT                                                                <  SRR4302543.6585460/94‑1 (MQ=60)

                                 TCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGC                                                              <  SRR4302543.3871568/94‑1 (MQ=60)

                                 TCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGC                                                              <  SRR4302543.4187351/94‑1 (MQ=60)

                                 TCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGC                                                              <  SRR4302543.4187352/94‑1 (MQ=60)

                                  CGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCA                                                             >  SRR4302543.6923867/1‑94 (MQ=60)

                                  CGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCA                                                             >  SRR4302543.2978362/1‑94 (MQ=60)

                                   GAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAA                                                            >  SRR4302543.5593238/1‑94 (MQ=60)

                                   GAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAA                                                            <  SRR4302543.5083801/94‑1 (MQ=60)

                                    AAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAA                                                           >  SRR4302543.6053785/1‑94 (MQ=60)

                                     AAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAC                                                          <  SRR4302543.3795036/94‑1 (MQ=60)

                                     AAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAC                                                          <  SRR4302543.5873756/94‑1 (MQ=60)

                                     AAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAC                                                          >  SRR4302543.7446536/1‑94 (MQ=60)

                                     AAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAC                                                          <  SRR4302543.6174835/94‑1 (MQ=60)

                                      AAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACT                                                         <  SRR4302543.731772/94‑1 (MQ=60)

                                       AAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTG                                                        <  SRR4302543.5960787/94‑1 (MQ=60)

                                       AAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTG                                                        <  SRR4302543.749952/94‑1 (MQ=60)

                                       AAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTG                                                        <  SRR4302543.1191791/94‑1 (MQ=60)

                                       AAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTG                                                        <  SRR4302543.3375503/94‑1 (MQ=60)

                                         GAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGA                                                      <  SRR4302543.4574530/94‑1 (MQ=60)

                                         GAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGA                                                      >  SRR4302543.7942029/1‑94 (MQ=60)

                                          AAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCGTATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAC                                                     <  SRR4302543.1894227/94‑1 (MQ=60)

                                          AAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAC                                                     <  SRR4302543.836172/94‑1 (MQ=60)

                                           AAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACG                                                    <  SRR4302543.4278359/94‑1 (MQ=60)

                                              ACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCT                                                 <  SRR4302543.5214355/94‑1 (MQ=60)

                                              ACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCT                                                 <  SRR4302543.4796027/94‑1 (MQ=60)

                                              ACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCT                                                 >  SRR4302543.7730471/1‑94 (MQ=60)

                                               CAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTC                                                >  SRR4302543.5558482/1‑94 (MQ=60)

                                               CAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTC                                                >  SRR4302543.7510416/1‑94 (MQ=60)

                                               CAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTC                                                >  SRR4302543.5558481/1‑94 (MQ=60)

                                                 AATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCT                                              <  SRR4302543.3774999/94‑1 (MQ=60)

                                                 AATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCT                                              <  SRR4302543.4946975/94‑1 (MQ=60)

                                                 AATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCT                                              <  SRR4302543.4218418/94‑1 (MQ=60)

                                                 AATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCT                                              <  SRR4302543.699667/94‑1 (MQ=60)

                                                 AATTACAAACTATCTCCATAAAGGGAAAATGCAATTATCCATGTCTGCACCTCAGGCATGGTTAAAATCCAAAGATGCAAACTGGACGCCTCCT                                              <  SRR4302543.4670387/94‑1 (MQ=60)

                                                  ATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTG                                             >  SRR4302543.7509376/1‑94 (MQ=60)

                                                  ATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTG                                             <  SRR4302543.5317693/94‑1 (MQ=60)

                                                   TTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGA                                            >  SRR4302543.2251337/1‑94 (MQ=60)

                                                    TACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAA                                           >  SRR4302543.7347409/1‑94 (MQ=60)

                                                     ACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAAC                                          >  SRR4302543.1853510/1‑94 (MQ=60)

                                                      CAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACT                                         >  SRR4302543.1852066/1‑94 (MQ=60)

                                                      CAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACT                                         >  SRR4302543.3162496/1‑94 (MQ=60)

                                                       AACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTT                                        <  SRR4302543.5310152/94‑1 (MQ=60)

                                                       AACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTT                                        >  SRR4302543.1777528/1‑94 (MQ=60)

                                                       AACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTT                                        <  SRR4302543.95021/94‑1 (MQ=60)

                                                         CTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTG                                      >  SRR4302543.6191563/1‑94 (MQ=60)

                                                         CTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTG                                      <  SRR4302543.1558680/94‑1 (MQ=60)

                                                          ntnncncnannanGGGAAAANNCNANTATCCATATCTGCACCTCAGGCATGGTTAAANTACAANGATGCNAACTGGACGCCTCCTGAACTTTGG                                     <  SRR4302543.7342344/81‑1 (MQ=60)

                                                          TTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGG                                     <  SRR4302543.2759663/94‑1 (MQ=60)

                                                           TATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGA                                    >  SRR4302543.3467673/1‑94 (MQ=60)

                                                           TATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGA                                    >  SRR4302543.3354965/1‑94 (MQ=60)

                                                             TCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAAT                                  <  SRR4302543.1983522/94‑1 (MQ=60)

                                                              CTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATC                                 <  SRR4302543.1000988/94‑1 (MQ=60)

                                                              CTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATC                                 >  SRR4302543.5727328/1‑94 (MQ=60)

                                                              CTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATC                                 >  SRR4302543.7694841/1‑94 (MQ=60)

                                                               TCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCA                                >  SRR4302543.6739645/1‑94 (MQ=60)

                                                                cgagtaagagagaagtgAATTATCCAGATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACCGGACGCCTCCTGAACTTTGGAATCAT                               <  SRR4302543.2259443/77‑1 (MQ=60)

                                                                CGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCAT                               <  SRR4302543.2259444/94‑1 (MQ=60)

                                                                CGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCAT                               >  SRR4302543.2495208/1‑94 (MQ=60)

                                                                CGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCAT                               <  SRR4302543.5545391/94‑1 (MQ=60)

                                                                CGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCAT                               >  SRR4302543.4567058/1‑94 (MQ=60)

                                                                 GATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATG                              <  SRR4302543.7236930/94‑1 (MQ=60)

                                                                 GATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATG                              >  SRR4302543.3741312/1‑94 (MQ=60)

                                                                  ATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATTCAAACTGGACGCCTCCTGAACTTTGGAATCATGG                             >  SRR4302543.4879533/1‑94 (MQ=60)

                                                                  ATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGG                             <  SRR4302543.1849130/94‑1 (MQ=60)

                                                                  ATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGG                             >  SRR4302543.5998919/1‑94 (MQ=60)

                                                                  ATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGG                             >  SRR4302543.5706599/1‑94 (MQ=60)

                                                                  ATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGG                             >  SRR4302543.5250619/1‑94 (MQ=60)

                                                                   TAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCTTGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGT                            <  SRR4302543.4500719/94‑1 (MQ=60)

                                                                   TAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGT                            <  SRR4302543.6441081/94‑1 (MQ=60)

                                                                   TAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGT                            >  SRR4302543.4469126/1‑94 (MQ=60)

                                                                   AAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGT                            <  SRR4302543.6441080/94‑1 (MQ=60)

                                                                    AAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTA                           >  SRR4302543.3347202/1‑94 (MQ=60)

                                                                    AAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTA                           >  SRR4302543.6753485/1‑94 (MQ=60)

                                                                    AAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTA                           >  SRR4302543.5950331/1‑94 (MQ=60)

                                                                     AAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAT                          <  SRR4302543.2900775/94‑1 (MQ=60)

                                                                     AAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAT                          <  SRR4302543.946062/94‑1 (MQ=60)

                                                                     AAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAT                          <  SRR4302543.3289486/94‑1 (MQ=60)

                                                                       GGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTG                        >  SRR4302543.2974845/1‑94 (MQ=60)

                                                                       GGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTG                        <  SRR4302543.7799539/94‑1 (MQ=60)

                                                                       GGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTG                        <  SRR4302543.788213/94‑1 (MQ=60)

                                                                       GGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTG                        <  SRR4302543.5123144/94‑1 (MQ=60)

                                                                        GGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGT                       >  SRR4302543.2246917/1‑94 (MQ=60)

                                                                        GGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGC                       >  SRR4302543.2246916/1‑94 (MQ=60)

                                                                         GAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCT                      >  SRR4302543.152663/1‑94 (MQ=60)

                                                                          AAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTG                     >  SRR4302543.7186011/1‑94 (MQ=60)

                                                                          AAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTG                     >  SRR4302543.7216556/1‑94 (MQ=60)

                                                                           AAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGG                    <  SRR4302543.5157288/94‑1 (MQ=60)

                                                                           AAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGG                    >  SRR4302543.2919580/1‑94 (MQ=60)

                                                                            AATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGG                   >  SRR4302543.1010042/1‑94 (MQ=60)

                                                                            AATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGG                   >  SRR4302543.5673158/1‑94 (MQ=60)

                                                                            AATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGG                   <  SRR4302543.6080162/94‑1 (MQ=60)

                                                                             ATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGG                  >  SRR4302543.1015538/1‑94 (MQ=60)

                                                                              TGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGC                 >  SRR4302543.1540740/1‑94 (MQ=60)

                                                                              TGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGC                 <  SRR4302543.1548113/94‑1 (MQ=60)

                                                                               GCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCA                >  SRR4302543.5602589/1‑94 (MQ=60)

                                                                                CAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCAT               >  SRR4302543.1989864/1‑94 (MQ=60)

                                                                                CAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCAT               >  SRR4302543.7994232/1‑94 (MQ=60)

                                                                                CAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCAT               >  SRR4302543.3652339/1‑94 (MQ=60)

                                                                                 AATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATT              >  SRR4302543.112564/1‑94 (MQ=60)

                                                                                  ATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTT             >  SRR4302543.5993530/1‑94 (MQ=60)

                                                                                  ATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTT             <  SRR4302543.7608166/94‑1 (MQ=60)

                                                                                  ATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTT             <  SRR4302543.5275361/94‑1 (MQ=60)

                                                                                    TATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCT           <  SRR4302543.1574713/94‑1 (MQ=60)

                                                                                     ATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTT          >  SRR4302543.7493724/1‑94 (MQ=60)

                                                                                     ATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTT          <  SRR4302543.6439543/94‑1 (MQ=60)

                                                                                     ATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTT          >  SRR4302543.7799054/1‑94 (MQ=60)

                                                                                        CATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGAC       <  SRR4302543.2887140/94‑1 (MQ=60)

                                                                                        CATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGAC       >  SRR4302543.7652300/1‑94 (MQ=60)

                                                                                         ATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACT      >  SRR4302543.5401631/1‑94 (MQ=60)

                                                                                         ATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACT      >  SRR4302543.6441635/1‑94 (MQ=60)

                                                                                           ATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTAC    >  SRR4302543.4108480/1‑94 (MQ=60)

                                                                                           ATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTAC    <  SRR4302543.178390/94‑1 (MQ=60)

                                                                                           ATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTAC    >  SRR4302543.4323608/1‑94 (MQ=60)

                                                                                           ATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGAGGCATTTCTTGACTAC    <  SRR4302543.6005404/94‑1 (MQ=60)

                                                                                             CTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTACAA  >  SRR4302543.7072497/1‑94 (MQ=60)

                                                                                             CTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTACAA  >  SRR4302543.4542770/1‑94 (MQ=60)

                                                                                             CTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTACAA  <  SRR4302543.4688616/94‑1 (MQ=60)

                                                                                             CTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTACAA  <  SRR4302543.4688617/94‑1 (MQ=60)

                                                                                             CTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTACAA  >  SRR4302543.159988/1‑94 (MQ=60)

                                                                                             CTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTACAA  >  SRR4302543.5373781/1‑94 (MQ=60)

CTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTACAA  >  NC_000913/3185714‑3185900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`