Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,210,945 C→T S86S (AGC→AGT rpoD → RNA polymerase sigma(70)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,210,9450CT99.3% 1068.3 / ‑6.0 306S86S (AGC→AGTrpoDRNA polymerase sigma(70)
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base T (149/154);  total (151/155)
Fisher's exact test for biased strand distribution p-value = 2.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 319 total aligned reads displayed.

GGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGA  >  NC_000913/3210855‑3211034
                                                                                          |                                                                                         
ggAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAgtgt                                                                                         <  1:6680871/93‑1 (MQ=255)
ggAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAgtgt                                                                                         <  2:5714902/93‑1 (MQ=255)
 gaagaaGCTCCGTATGCTGATGATCTGAGTCTGTCTGAAAACACCGCGGACTAAGATGCTGCCGAAGCCGCCGCGCAGGTTCTTTCCAGtgtg                                                                                        <  2:7769058/93‑1 (MQ=255)
 gaagaaGCGCCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGtgtg                                                                                        >  2:17591/1‑93 (MQ=255)
 gaagaaGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGtgtg                                                                                        >  2:2039585/1‑93 (MQ=255)
   agaagCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGa                                                                                      >  2:5013304/1‑93 (MQ=255)
    gaagCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGGAGGGGCTTTCCATCGTGGat                                                                                     >  2:2714346/1‑92 (MQ=255)
    gaagCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGaa                                                                                     >  1:1038644/1‑93 (MQ=255)
    gaagCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGaa                                                                                     <  2:3246914/93‑1 (MQ=255)
     aagCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAAt                                                                                    <  2:6023088/93‑1 (MQ=255)
      agCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATc                                                                                   <  1:5378501/93‑1 (MQ=255)
      agCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATc                                                                                   <  2:2368536/93‑1 (MQ=255)
       gCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCt                                                                                  >  2:1502036/1‑93 (MQ=255)
         aCCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGa                                                                                >  1:5774567/1‑93 (MQ=255)
          ccGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGaa                                                                               >  2:3963742/1‑93 (MQ=255)
          ccGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGaa                                                                               >  2:739909/1‑93 (MQ=255)
          ccGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGaa                                                                               <  2:5425908/93‑1 (MQ=255)
           cGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGaaa                                                                              >  2:5110374/1‑93 (MQ=255)
           cGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGaaa                                                                              >  1:4939501/1‑93 (MQ=255)
            ggATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAAt                                                                             <  1:2903109/93‑1 (MQ=255)
            ggATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAAt                                                                             <  2:6540325/93‑1 (MQ=255)
            ggATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAAt                                                                             >  1:488959/1‑93 (MQ=255)
             gATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATc                                                                            <  2:2750473/93‑1 (MQ=255)
             gATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATc                                                                            >  2:7636489/1‑93 (MQ=255)
             gATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATc                                                                            >  2:4460532/1‑93 (MQ=255)
             gATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATc                                                                            <  1:5990610/93‑1 (MQ=255)
              aTGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCg                                                                           <  1:3080253/93‑1 (MQ=255)
               tGCCGATGATCTGATGCTGGCTGAAAACACCGCGGCCGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCgg                                                                          >  2:4189106/1‑93 (MQ=255)
               tGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCgg                                                                          <  1:5207912/93‑1 (MQ=255)
               tGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCgg                                                                          >  2:3405441/1‑93 (MQ=255)
                gCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCggg                                                                         >  2:6679285/1‑93 (MQ=255)
                gCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCggg                                                                         <  1:2097841/93‑1 (MQ=255)
                   gatgatCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGgcgc                                                                      >  1:7375382/1‑93 (MQ=255)
                   gatgatCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGgcgc                                                                      >  1:1979800/1‑93 (MQ=255)
                    atgatCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCa                                                                     <  2:1270750/93‑1 (MQ=255)
                    atgatCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCa                                                                     <  1:6960895/93‑1 (MQ=255)
                    atgatCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCa                                                                     >  1:6343818/1‑93 (MQ=255)
                    atgatCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCa                                                                     <  2:6425069/93‑1 (MQ=255)
                     tgatCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCAc                                                                    <  1:822601/93‑1 (MQ=255)
                     tgatCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCAc                                                                    <  1:267092/93‑1 (MQ=255)
                     tgatCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCAc                                                                    <  2:701587/93‑1 (MQ=255)
                       atCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGa                                                                  >  2:2515624/1‑93 (MQ=255)
                         cTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACt                                                                <  2:1951344/93‑1 (MQ=255)
                         cTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACt                                                                <  1:2992321/93‑1 (MQ=255)
                          tGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTg                                                               >  1:2792190/1‑93 (MQ=255)
                           gATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGa                                                              >  2:3942709/1‑93 (MQ=255)
                             tGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGAcc                                                            <  2:2792189/93‑1 (MQ=255)
                              gctggctgAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGAccc                                                           <  1:7547553/93‑1 (MQ=255)
                               ctggctgAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCg                                                          <  1:5087822/93‑1 (MQ=255)
                                tggctgAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCgg                                                         >  2:5270885/1‑93 (MQ=255)
                                tggctgAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCgg                                                         >  1:3754326/1‑93 (MQ=255)
                                tggctgAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCgg                                                         >  1:1251910/1‑93 (MQ=255)
                                  gctgAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTa                                                       <  1:6435386/93‑1 (MQ=255)
                                  gctgAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGtc                                                       >  2:4890156/1‑92 (MQ=255)
                                    tgAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACg                                                     >  1:4843631/1‑93 (MQ=255)
                                      aaaaCACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCa                                                   <  2:1003291/93‑1 (MQ=255)
                                          cacCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTCCGCATGTa                                               >  1:5494746/1‑93 (MQ=255)
                                           acCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTAc                                              >  2:3047231/1‑93 (MQ=255)
                                           acCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTAc                                              >  1:4007172/1‑93 (MQ=255)
                                            ccGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACa                                             <  2:7257158/93‑1 (MQ=255)
                                            ccGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACa                                             >  2:1626286/1‑93 (MQ=255)
                                            ccGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACa                                             <  2:5599597/93‑1 (MQ=255)
                                            ccGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACa                                             <  1:325733/93‑1 (MQ=255)
                                             cgcgGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACAt                                            <  2:7846780/93‑1 (MQ=255)
                                              gcgGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATg                                           <  1:1125720/93‑1 (MQ=255)
                                              gcgGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATg                                           <  2:4808742/93‑1 (MQ=255)
                                              gcgGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATg                                           <  1:7183149/93‑1 (MQ=255)
                                               cgGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGc                                          <  1:7815665/93‑1 (MQ=255)
                                               cgGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGc                                          <  1:3498561/93‑1 (MQ=255)
                                                 gACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGt                                        >  2:5515177/1‑93 (MQ=255)
                                                     aaGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGaaa                                    >  1:1733550/1‑93 (MQ=255)
                                                      aGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAAt                                   <  1:4275711/93‑1 (MQ=255)
                                                      aGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAAt                                   >  1:4342338/1‑93 (MQ=255)
                                                       gATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATg                                  >  1:5319845/1‑93 (MQ=255)
                                                         tgctgcCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATggg                                >  1:2479543/1‑93 (MQ=255)
                                                          gctgcCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGc                               <  1:4754662/93‑1 (MQ=255)
                                                             gcCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCAcc                            <  2:7605974/93‑1 (MQ=255)
                                                               cGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGt                          <  2:1110904/93‑1 (MQ=255)
                                                                  aGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGa                       <  2:905611/93‑1 (MQ=255)
                                                                  aGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGa                       <  1:6281246/93‑1 (MQ=255)
                                                                   gccgccGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGaa                      >  2:4692485/1‑93 (MQ=255)
                                                                    ccgccgCGCAGGTGCTTTCCAGTGTGGCATCTGAAATCGGGCGACCGCCTGACCCGGTCCGCATGTACATGCGGGCAATGGGCACCGTTgcag                     >  1:2274766/1‑90 (MQ=255)
                                                                     cgccgcGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACt                    <  2:7088906/93‑1 (MQ=255)
                                                                       ccgcGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGt                  <  2:753607/93‑1 (MQ=255)
                                                                        cgcgCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGtt                 <  1:2195449/93‑1 (MQ=255)
                                                                        cgcgCAGCTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGtt                 <  1:4495133/93‑1 (MQ=255)
                                                                          cgcAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGa               >  1:6803033/1‑93 (MQ=255)
                                                                           gcAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGAc              >  1:4183840/1‑93 (MQ=255)
                                                                            cAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGAcc             <  1:1624476/93‑1 (MQ=255)
                                                                             aGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGAccc            >  1:750390/1‑93 (MQ=255)
                                                                                 gCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGa        >  1:6191132/1‑93 (MQ=255)
                                                                                 gCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGa        >  1:3607514/1‑93 (MQ=255)
                                                                                 gCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGa        >  2:6323099/1‑93 (MQ=255)
                                                                                   tttCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAg      >  1:6550395/1‑93 (MQ=255)
                                                                                   tttCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAg      >  2:1876265/1‑93 (MQ=255)
                                                                                   tttCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAg      >  1:1427560/1‑93 (MQ=255)
                                                                                    ttCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAgg     <  2:5863183/93‑1 (MQ=255)
                                                                                     tCCAGAGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGc    <  1:62327/93‑1 (MQ=255)
                                                                                      ccAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCg   <  1:3905109/93‑1 (MQ=255)
                                                                                      ccAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCg   <  1:5685625/93‑1 (MQ=255)
                                                                                          |                                                                                         
GGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGA  >  NC_000913/3210855‑3211034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATT  >  NC_000913/3210853‑3211038
                                                                                            |                                                                                             
ATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTG                                                                                              <  SRR4302543.6045906/94‑1 (MQ=60)
 TGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAACACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGT                                                                                             <  SRR4302543.7224913/94‑1 (MQ=60)
  GGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTG                                                                                            <  SRR4302543.3516319/94‑1 (MQ=60)
  GGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTG                                                                                            <  SRR4302543.6743944/94‑1 (MQ=60)
  GGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTG                                                                                            <  SRR4302543.7968528/94‑1 (MQ=60)
   GAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGG                                                                                           <  SRR4302543.1357527/94‑1 (MQ=60)
    AAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGA                                                                                          <  SRR4302543.6329579/94‑1 (MQ=60)
     AGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAA                                                                                         >  SRR4302543.1047887/1‑94 (MQ=60)
     AGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAA                                                                                         <  SRR4302543.2646959/94‑1 (MQ=60)
     AGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAA                                                                                         >  SRR4302543.5327182/1‑94 (MQ=60)
     AGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAA                                                                                         >  SRR4302543.445555/1‑94 (MQ=60)
     AGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCAGCCGCGCAGGTGCTTTCCAGTGTGGAG                                                                                         >  SRR4302543.755487/1‑94 (MQ=60)
      GAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAAT                                                                                        <  SRR4302543.4789711/94‑1 (MQ=60)
        AGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCT                                                                                      <  SRR4302543.5427256/94‑1 (MQ=60)
        AGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCT                                                                                      <  SRR4302543.5396744/94‑1 (MQ=60)
          CACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGA                                                                                    >  SRR4302543.5216884/1‑94 (MQ=60)
          CACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGA                                                                                    >  SRR4302543.6360524/1‑94 (MQ=60)
          CACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGA                                                                                    >  SRR4302543.5305318/1‑94 (MQ=60)
          CACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGA                                                                                    >  SRR4302543.5827129/1‑94 (MQ=60)
           ACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAA                                                                                   >  SRR4302543.5120833/1‑94 (MQ=60)
            CCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAA                                                                                  <  SRR4302543.5451378/94‑1 (MQ=60)
            CCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAA                                                                                  >  SRR4302543.7902403/1‑94 (MQ=60)
            CCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAA                                                                                  >  SRR4302543.4984478/1‑94 (MQ=60)
             CGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAAT                                                                                 <  SRR4302543.5842383/94‑1 (MQ=60)
             CGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAAT                                                                                 >  SRR4302543.493475/1‑94 (MQ=60)
             CGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAAT                                                                                 >  SRR4302543.2190956/1‑94 (MQ=60)
              GGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATC                                                                                <  SRR4302543.2929505/94‑1 (MQ=60)
              GGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATC                                                                                <  SRR4302543.6444326/94‑1 (MQ=60)
              GGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATC                                                                                <  SRR4302543.7308121/94‑1 (MQ=60)
               GATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCG                                                                               <  SRR4302543.6045511/94‑1 (MQ=60)
                ATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGG                                                                              >  SRR4302543.1461147/1‑94 (MQ=60)
                ATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGG                                                                              <  SRR4302543.3107951/94‑1 (MQ=60)
                 TGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGG                                                                             <  SRR4302543.5254846/94‑1 (MQ=60)
                  GCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGC                                                                            <  SRR4302543.496147/94‑1 (MQ=60)
                  GCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGC                                                                            <  SRR4302543.2116598/94‑1 (MQ=60)
                  GCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGC                                                                            <  SRR4302543.6131441/94‑1 (MQ=60)
                   CCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCG                                                                           <  SRR4302543.6532014/94‑1 (MQ=60)
                   CCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCG                                                                           <  SRR4302543.849401/94‑1 (MQ=60)
                    CGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGC                                                                          >  SRR4302543.6390535/1‑94 (MQ=60)
                    CGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGC                                                                          <  SRR4302543.7515611/94‑1 (MQ=60)
                    CGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGC                                                                          >  SRR4302543.7446281/1‑94 (MQ=60)
                    CGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGC                                                                          >  SRR4302543.1997545/1‑94 (MQ=60)
                    CGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGC                                                                          >  SRR4302543.1937638/1‑94 (MQ=60)
                     GATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCA                                                                         >  SRR4302543.3929321/1‑94 (MQ=60)
                     GATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCA                                                                         >  SRR4302543.4101807/1‑94 (MQ=60)
                     GATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCA                                                                         >  SRR4302543.6403472/1‑94 (MQ=60)
                      ATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCAC                                                                        <  SRR4302543.7026394/94‑1 (MQ=60)
                       TGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACG                                                                       <  SRR4302543.829853/94‑1 (MQ=60)
                       TGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACG                                                                       <  SRR4302543.759638/94‑1 (MQ=60)
                       TGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACG                                                                       <  SRR4302543.269437/94‑1 (MQ=60)
                        GATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGA                                                                      >  SRR4302543.1118030/1‑94 (MQ=60)
                         ATCTGATGCTGGCTGAAAACGCCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGAC                                                                     >  SRR4302543.1077267/1‑94 (MQ=60)
                         ATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGAC                                                                     >  SRR4302543.683504/1‑94 (MQ=60)
                         ATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGAC                                                                     >  SRR4302543.4870364/1‑94 (MQ=60)
                          TCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACT                                                                    >  SRR4302543.6259445/1‑94 (MQ=60)
                           CTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTG                                                                   >  SRR4302543.5185519/1‑94 (MQ=60)
                           CTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTG                                                                   <  SRR4302543.3019483/94‑1 (MQ=60)
                           CTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTG                                                                   >  SRR4302543.2817690/1‑94 (MQ=60)
                             GATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGAC                                                                 <  SRR4302543.633338/94‑1 (MQ=60)
                             GATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGAC                                                                 >  SRR4302543.6025359/1‑94 (MQ=60)
                             GATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGAC                                                                 >  SRR4302543.920138/1‑94 (MQ=60)
                              ATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACC                                                                <  SRR4302543.2433855/94‑1 (MQ=60)
                                GCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCG                                                              <  SRR4302543.7619453/94‑1 (MQ=60)
                                 CTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGG                                                             <  SRR4302543.5133939/94‑1 (MQ=60)
                                 CTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGG                                                             >  SRR4302543.3787357/1‑94 (MQ=60)
                                 CTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGG                                                             >  SRR4302543.1263134/1‑94 (MQ=60)
                                 CTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGG                                                             >  SRR4302543.1652699/1‑94 (MQ=60)
                                    GCTGAAAACCCCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTAC                                                          <  SRR4302543.434898/94‑1 (MQ=60)
                                    GCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTAC                                                          <  SRR4302543.2079248/94‑1 (MQ=60)
                                    GCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTAC                                                          <  SRR4302543.6496022/94‑1 (MQ=60)
                                    GCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTAC                                                          <  SRR4302543.4336126/94‑1 (MQ=60)
                                     CTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACG                                                         >  SRR4302543.4887795/1‑94 (MQ=60)
                                        AAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCAT                                                      <  SRR4302543.994516/94‑1 (MQ=60)
                                          AACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGT                                                    >  SRR4302543.2185988/1‑94 (MQ=60)
                                          AACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGT                                                    >  SRR4302543.3278595/1‑94 (MQ=60)
                                           ACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTCCGCATGTA                                                   >  SRR4302543.5544585/1‑94 (MQ=60)
                                           ACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTA                                                   <  SRR4302543.7703894/94‑1 (MQ=60)
                                           ACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTA                                                   >  SRR4302543.425986/1‑94 (MQ=60)
                                            CACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTAC                                                  >  SRR4302543.4042940/1‑94 (MQ=60)
                                             ACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACA                                                 >  SRR4302543.2709728/1‑94 (MQ=60)
                                              CCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTAGGCATGCACAT                                                >  SRR4302543.4245224/1‑94 (MQ=60)
                                              CCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACAT                                                <  SRR4302543.1248089/94‑1 (MQ=60)
                                              CCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACAT                                                <  SRR4302543.328683/94‑1 (MQ=60)
                                              CCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACAT                                                <  SRR4302543.6463784/94‑1 (MQ=60)
                                              CCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACAT                                                <  SRR4302543.2907177/94‑1 (MQ=60)
                                               CGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATG                                               >  SRR4302543.1201118/1‑94 (MQ=60)
                                                GCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGC                                              <  SRR4302543.7252854/94‑1 (MQ=60)
                                                GCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGC                                              <  SRR4302543.1135937/94‑1 (MQ=60)
                                                 CGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCG                                             <  SRR4302543.7889316/94‑1 (MQ=60)
                                                 CGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCG                                             <  SRR4302543.3529854/94‑1 (MQ=60)
                                                   GACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTG                                           <  SRR4302543.6035591/94‑1 (MQ=60)
                                                     CGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAA                                         >  SRR4302543.5540968/1‑94 (MQ=60)
                                                      GAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAA                                        >  SRR4302543.2004319/1‑94 (MQ=60)
                                                      GAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAA                                        >  SRR4302543.1749000/1‑94 (MQ=60)
                                                       AAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAAT                                       <  SRR4302543.704280/94‑1 (MQ=60)
                                                       AAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAAT                                       >  SRR4302543.4381720/1‑94 (MQ=60)
                                                        AGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATG                                      <  SRR4302543.3098045/94‑1 (MQ=60)
                                                        AGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATG                                      >  SRR4302543.5367912/1‑94 (MQ=60)
                                                        AGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATG                                      <  SRR4302543.1918907/94‑1 (MQ=60)
                                                        AGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATG                                      >  SRR4302543.7608006/1‑94 (MQ=60)
                                                        AGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATG                                      <  SRR4302543.4314574/94‑1 (MQ=60)
                                                         GATGCTGCGGAAGCCGCGGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGG                                     <  SRR4302543.3159867/94‑1 (MQ=60)
                                                         GATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGG                                     >  SRR4302543.5774612/1‑94 (MQ=60)
                                                         GATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGG                                     <  SRR4302543.668041/94‑1 (MQ=60)
                                                         GATGCTGCCGAAGCCGCCGCGCAGGGGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGG                                     >  SRR4302543.6057416/1‑94 (MQ=60)
                                                          ATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGG                                    <  SRR4302543.400709/94‑1 (MQ=60)
                                                          ATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGG                                    >  SRR4302543.2501975/1‑94 (MQ=60)
                                                          ATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGG                                    <  SRR4302543.286372/94‑1 (MQ=60)
                                                          ATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGG                                    >  SRR4302543.4457646/1‑94 (MQ=60)
                                                           TGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGC                                   >  SRR4302543.3557662/1‑94 (MQ=60)
                                                            GCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCA                                  >  SRR4302543.7344900/1‑94 (MQ=60)
                                                            GCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCA                                  <  SRR4302543.4798117/94‑1 (MQ=60)
                                                            GCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCA                                  <  SRR4302543.6896096/94‑1 (MQ=60)
                                                            GCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCA                                  <  SRR4302543.6565613/94‑1 (MQ=60)
                                                             CTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCAC                                 >  SRR4302543.5339573/1‑94 (MQ=60)
                                                              TGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACC                                <  SRR4302543.7101364/94‑1 (MQ=60)
                                                              TGCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACC                                >  SRR4302543.497312/1‑94 (MQ=60)
                                                               GCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCG                               >  SRR4302543.3564942/1‑94 (MQ=60)
                                                               GCCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCG                               <  SRR4302543.7765120/94‑1 (MQ=60)
                                                                CCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGT                              >  SRR4302543.576540/1‑94 (MQ=60)
                                                                CCGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGT                              >  SRR4302543.1875962/1‑94 (MQ=60)
                                                                 CGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTT                             >  SRR4302543.4662043/1‑94 (MQ=60)
                                                                 CGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTT                             >  SRR4302543.5706241/1‑94 (MQ=60)
                                                                 CGAAGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTT                             <  SRR4302543.2663391/94‑1 (MQ=60)
                                                                    AGCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAA                          <  SRR4302543.6340436/94‑1 (MQ=60)
                                                                     GCCGCCGCGCAGGTGCTTTCCAGTGTGGCATCTGAAATCGGGCGACCGCCTGACCCGGTCCGCATGTACATGCGGGCAATGGGCACCGTTGcag                         >  SRR4302543.2295569/1‑91 (MQ=59)
                                                                     GCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAAC                         >  SRR4302543.2295568/1‑94 (MQ=60)
                                                                     GCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAAC                         <  SRR4302543.4927074/94‑1 (MQ=60)
                                                                     GCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAAC                         <  SRR4302543.1320551/94‑1 (MQ=60)
                                                                     GCCGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGACCCGTTGAAC                         >  SRR4302543.2295567/1‑94 (MQ=60)
                                                                       CGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTG                       >  SRR4302543.6787676/1‑94 (MQ=60)
                                                                       CGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTG                       >  SRR4302543.2997313/1‑94 (MQ=60)
                                                                       CGCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTG                       >  SRR4302543.2548978/1‑94 (MQ=60)
                                                                        GCCGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGT                      <  SRR4302543.5722714/94‑1 (MQ=60)
                                                                          CGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTG                    >  SRR4302543.1664933/1‑94 (MQ=60)
                                                                          CGCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTG                    <  SRR4302543.2215175/94‑1 (MQ=60)
                                                                          CGCGCAGCTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTG                    <  SRR4302543.4535986/94‑1 (MQ=60)
                                                                           GCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTTAACTGTTGA                   >  SRR4302543.6867273/1‑94 (MQ=60)
                                                                           GCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGA                   >  SRR4302543.6867272/1‑94 (MQ=60)
                                                                           GCGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGA                   >  SRR4302543.4887996/1‑94 (MQ=60)
                                                                            CGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGAC                  >  SRR4302543.4221752/1‑94 (MQ=60)
                                                                            CGCAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGAC                  >  SRR4302543.5394068/1‑94 (MQ=60)
                                                                              CAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCC                <  SRR4302543.3346367/94‑1 (MQ=60)
                                                                              CAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCC                >  SRR4302543.4107607/1‑94 (MQ=60)
                                                                              CAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCC                >  SRR4302543.1453954/1‑94 (MQ=60)
                                                                              CAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCC                >  SRR4302543.757048/1‑94 (MQ=60)
                                                                              CAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCC                >  SRR4302543.3701644/1‑94 (MQ=60)
                                                                              CAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCC                <  SRR4302543.1638952/94‑1 (MQ=60)
                                                                              CAGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCC                >  SRR4302543.3653404/1‑94 (MQ=60)
                                                                               AGGTGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCG               <  SRR4302543.3945843/94‑1 (MQ=60)
                                                                                  TGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGA            >  SRR4302543.6559489/1‑94 (MQ=60)
                                                                                  TGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGA            >  SRR4302543.3639344/1‑94 (MQ=60)
                                                                                  TGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGA            >  SRR4302543.6675457/1‑94 (MQ=60)
                                                                                  TGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGA            >  SRR4302543.6249632/1‑94 (MQ=60)
                                                                                  TGCTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGGGAAATGGGCACCGTTGAACTGTTGACCCGCGA            >  SRR4302543.6249634/1‑94 (MQ=60)
                                                                                    CTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAG          <  SRR4302543.3846844/94‑1 (MQ=60)
                                                                                    CTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAG          >  SRR4302543.6612051/1‑94 (MQ=60)
                                                                                    CTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAG          <  SRR4302543.5130878/94‑1 (MQ=60)
                                                                                    CTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAG          >  SRR4302543.2725371/1‑94 (MQ=60)
                                                                                    CTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAG          >  SRR4302543.1440475/1‑94 (MQ=60)
                                                                                    CTTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAG          <  SRR4302543.7420181/94‑1 (MQ=60)
                                                                                     TTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGACCTGTTGACCCGGCAAGG         >  SRR4302543.418950/1‑94 (MQ=60)
                                                                                     TTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGG         <  SRR4302543.3263743/94‑1 (MQ=60)
                                                                                     TTTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGG         <  SRR4302543.4804450/94‑1 (MQ=60)
                                                                                      TTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGC        <  SRR4302543.3051831/94‑1 (MQ=60)
                                                                                      TTCCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGC        <  SRR4302543.2989818/94‑1 (MQ=60)
                                                                                       TCCAGAGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCG       <  SRR4302543.62872/94‑1 (MQ=60)
                                                                                        CCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGA      <  SRR4302543.3939585/94‑1 (MQ=60)
                                                                                        CCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGA      <  SRR4302543.5737514/94‑1 (MQ=60)
                                                                                        CCAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGA      >  SRR4302543.4855300/1‑94 (MQ=60)
                                                                                        CCAGTGTGGAATCTGAAATCAGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGAACCGTTGAACTGTTGACCCGCGAAGGCGA      >  SRR4302543.2394887/1‑94 (MQ=60)
                                                                                         CAGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGTGCACCGTTGAACTGTTTACCCGCGAAGGCGCA     >  SRR4302543.829417/1‑94 (MQ=60)
                                                                                          AGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAA    >  SRR4302543.5951809/1‑94 (MQ=60)
                                                                                          AGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAA    >  SRR4302543.5951582/1‑94 (MQ=60)
                                                                                          AGTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAA    >  SRR4302543.132147/1‑94 (MQ=60)
                                                                                           GTGTGGAATCTGAAATCGGGCGCACGCCTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAAT   >  SRR4302543.2882561/1‑94 (MQ=60)
                                                                                           GTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAAT   <  SRR4302543.7756552/94‑1 (MQ=60)
                                                                                           GTGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAAT   >  SRR4302543.1873255/1‑94 (MQ=60)
                                                                                            TGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATT  <  SRR4302543.6691911/94‑1 (MQ=60)
                                                                                            TGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATT  <  SRR4302543.6692151/94‑1 (MQ=60)
                                                                                            TGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATT  <  SRR4302543.3330106/94‑1 (MQ=60)
                                                                                            |                                                                                             
ATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATT  >  NC_000913/3210853‑3211038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: