Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,223,631 A→G E90G (GAA→GGA)  ebgC → evolved beta‑D‑galactosidase beta subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,223,6310AG99.5% 1277.7 / ‑3.9 404E90G (GAA→GGA) ebgCevolved beta‑D‑galactosidase beta subunit
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (190/212);  total (191/213)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.74e-01

Only 100 of 411 total aligned reads displayed.

TACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGAATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATAT  >  NC_000913/3223539‑3223721
                                                                                            |                                                                                          
tACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGa                                                                                            <  1:2625059/93‑1 (MQ=255)
  ccGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGat                                                                                          <  2:282699/93‑1 (MQ=255)
   cGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGata                                                                                         <  1:4581858/93‑1 (MQ=255)
    gggCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGatat                                                                                        >  2:2890796/1‑93 (MQ=255)
    gggCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGatat                                                                                        >  1:4146049/1‑93 (MQ=255)
    gggCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGatat                                                                                        <  1:2009623/93‑1 (MQ=255)
     ggCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGAtatt                                                                                       >  2:2178341/1‑93 (MQ=255)
     ggCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGAtatt                                                                                       <  2:4511527/93‑1 (MQ=255)
     ggCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGAtatt                                                                                       <  1:4903294/93‑1 (MQ=255)
      gCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGAtatta                                                                                      >  2:1592092/1‑93 (MQ=255)
      gCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGAtatta                                                                                      <  1:7669300/93‑1 (MQ=255)
       cATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGAtattat                                                                                     >  1:6731727/1‑93 (MQ=255)
        aTCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATc                                                                                    <  2:7734731/93‑1 (MQ=255)
        aTCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATc                                                                                    >  1:5535303/1‑93 (MQ=255)
         tCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCg                                                                                   >  1:1622694/1‑93 (MQ=255)
          cGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGt                                                                                  <  2:1747647/93‑1 (MQ=255)
             cGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGtgat                                                                               >  1:5841197/1‑93 (MQ=255)
              gCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGtgatg                                                                              >  2:6501655/1‑93 (MQ=255)
              gCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGtgatg                                                                              >  2:7661225/1‑93 (MQ=255)
               cTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGtgatga                                                                             >  1:6915103/1‑93 (MQ=255)
               cTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGtgatga                                                                             >  2:6041903/1‑93 (MQ=255)
                tATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGaa                                                                            <  1:4278728/93‑1 (MQ=255)
                tATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGaa                                                                            >  2:7135047/1‑93 (MQ=255)
                 aTTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGaaa                                                                           <  2:2485323/93‑1 (MQ=255)
                 aTTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGaaa                                                                           >  2:6186917/1‑93 (MQ=255)
                 aTTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGaaa                                                                           <  1:5656414/93‑1 (MQ=255)
                  ttttGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAAc                                                                          <  1:2177821/93‑1 (MQ=255)
                   tttGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACt                                                                         >  2:4213973/1‑93 (MQ=255)
                       aaGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGAcc                                                                     >  1:3560646/1‑93 (MQ=255)
                        aGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCg                                                                    >  2:5712447/1‑93 (MQ=255)
                         gTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGt                                                                   >  2:357018/1‑93 (MQ=255)
                         gTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGt                                                                   >  2:3655848/1‑93 (MQ=255)
                         gTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGt                                                                   >  1:730326/1‑93 (MQ=255)
                         gTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGt                                                                   <  1:2973623/93‑1 (MQ=255)
                             aTTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAat                                                               >  2:126366/1‑93 (MQ=255)
                             aTTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAat                                                               >  1:3908892/1‑93 (MQ=255)
                              ttACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAata                                                              <  2:7933153/93‑1 (MQ=255)
                              ttACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCATGAata                                                              >  2:4800903/1‑93 (MQ=255)
                                  tacCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTa                                                          >  2:6876798/1‑93 (MQ=255)
                                  tacCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTa                                                          >  1:70230/1‑93 (MQ=255)
                                     cTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTaaaa                                                       <  1:5904563/93‑1 (MQ=255)
                                     cTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTaaaa                                                       >  2:2461225/1‑93 (MQ=255)
                                     cTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTaaaa                                                       <  1:6300488/93‑1 (MQ=255)
                                      tGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAg                                                      <  2:7433064/93‑1 (MQ=255)
                                        cAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGc                                                    >  2:5532718/1‑93 (MQ=255)
                                         aaGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCt                                                   <  2:5504864/93‑1 (MQ=255)
                                          aGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTg                                                  >  1:5018804/1‑93 (MQ=255)
                                          aGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTg                                                  <  2:7466733/93‑1 (MQ=255)
                                           gggCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGc                                                 <  2:3902823/93‑1 (MQ=255)
                                            ggCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCg                                                >  1:102751/1‑93 (MQ=255)
                                             gcagcaAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCgg                                               >  2:6992136/1‑93 (MQ=255)
                                             gcagcaAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCgg                                               <  2:7271240/93‑1 (MQ=255)
                                             gcagcaAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCgg                                               <  1:3790782/93‑1 (MQ=255)
                                              cagcaAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGga                                              <  2:2020282/93‑1 (MQ=255)
                                              cagcaAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGga                                              >  2:5320358/1‑93 (MQ=255)
                                              cagcaAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGga                                              <  2:238982/93‑1 (MQ=255)
                                              cagcaAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGga                                              <  2:5214539/93‑1 (MQ=255)
                                               agcaAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGgag                                             <  2:4853786/93‑1 (MQ=255)
                                                gcaAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGgaga                                            >  2:5100216/1‑93 (MQ=255)
                                                    aaaaTTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAAcc                                        >  2:1632489/1‑93 (MQ=255)
                                                       aTTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGtt                                     >  2:6303640/1‑93 (MQ=255)
                                                       aTTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGtt                                     <  2:6691202/93‑1 (MQ=255)
                                                        ttGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTg                                    >  1:1862968/1‑93 (MQ=255)
                                                        atGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTg                                    <  1:3641781/92‑1 (MQ=255)
                                                         tGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGa                                   <  2:2681654/93‑1 (MQ=255)
                                                         tGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGa                                   <  2:1866672/93‑1 (MQ=255)
                                                         tGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGa                                   <  1:7407210/93‑1 (MQ=255)
                                                          gAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAg                                  <  2:3736730/93‑1 (MQ=255)
                                                           aaTATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAgg                                 <  1:1686407/93‑1 (MQ=255)
                                                           aaTATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAgg                                 <  1:6560143/93‑1 (MQ=255)
                                                           aaTATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAgg                                 >  2:1510354/1‑93 (MQ=255)
                                                            atatGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGt                                <  1:817946/93‑1 (MQ=255)
                                                             tatGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTc                               >  1:5855233/1‑93 (MQ=255)
                                                             tatGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTc                               >  1:4446134/1‑93 (MQ=255)
                                                              atGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTcc                              <  1:279169/93‑1 (MQ=255)
                                                               tGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCa                             >  1:3035676/1‑93 (MQ=255)
                                                                   ccGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGaa                         <  1:523933/93‑1 (MQ=255)
                                                                   ccGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGaa                         <  1:4701661/93‑1 (MQ=255)
                                                                    cGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAg                        >  2:25351/1‑93 (MQ=255)
                                                                       aaGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAggga                     >  1:3181307/1‑92 (MQ=255)
                                                                         gagaCATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCaa                   >  1:4794168/1‑93 (MQ=255)
                                                                          agaCATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCaaa                  <  1:5489744/93‑1 (MQ=255)
                                                                           gaCATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAAt                 <  2:323465/93‑1 (MQ=255)
                                                                             cATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCg               >  1:1454958/1‑93 (MQ=255)
                                                                              aTTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGt              <  1:1148960/93‑1 (MQ=255)
                                                                              aTTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGCTGAGGTCCACGAAGGGCAAATCGt              >  2:4308360/1‑93 (MQ=255)
                                                                               ttACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGtt             >  2:115458/1‑93 (MQ=255)
                                                                               ttACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGtt             >  1:7189977/1‑93 (MQ=255)
                                                                               ttACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGtt             >  1:2362503/1‑93 (MQ=255)
                                                                               ttACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGtt             >  1:1359496/1‑93 (MQ=255)
                                                                               ttACAGGGAGAGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAATGCTGCGGAGAAACCGTTGAGGTCCACGAAGTGCAAATCGtt             >  2:4463036/1‑93 (MQ=255)
                                                                                tACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTa            <  2:5912807/93‑1 (MQ=255)
                                                                                  cAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTAtt          <  1:5436459/93‑1 (MQ=255)
                                                                                   aGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTAttt         >  2:33387/1‑93 (MQ=255)
                                                                                   aGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTAttt         <  1:7737785/93‑1 (MQ=255)
                                                                                     gTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGc       >  1:961837/1‑93 (MQ=255)
                                                                                     gTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGc       <  1:6169098/93‑1 (MQ=255)
                                                                                       aGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGa     <  2:4664365/93‑1 (MQ=255)
                                                                                        gTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGat    <  2:1362357/93‑1 (MQ=255)
                                                                                         tGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGata   >  2:2144484/1‑93 (MQ=255)
                                                                                            |                                                                                          
TACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGAATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATAT  >  NC_000913/3223539‑3223721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 204 total aligned reads displayed.
TTACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGAATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCC  >  NC_000913/3223538‑3223723
                                                                                             |                                                                                            
TTACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGG                                                                                              <  SRR4302543.3766897/94‑1 (MQ=60)
 TACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGA                                                                                             >  SRR4302543.2735786/1‑94 (MQ=60)
 TACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGAT                                                                                             <  SRR4302543.2648821/94‑1 (MQ=60)
  ACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGAT                                                                                            <  SRR4302543.159930/94‑1 (MQ=60)
  ACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGAT                                                                                            <  SRR4302543.4001144/94‑1 (MQ=60)
   CCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATA                                                                                           <  SRR4302543.2444567/94‑1 (MQ=60)
   CCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATA                                                                                           >  SRR4302543.6435712/1‑94 (MQ=60)
    CGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATAT                                                                                          <  SRR4302543.795661/94‑1 (MQ=60)
    CGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATAT                                                                                          >  SRR4302543.4183517/1‑94 (MQ=60)
    CGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATAT                                                                                          <  SRR4302543.304705/94‑1 (MQ=60)
    CGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATAT                                                                                          <  SRR4302543.4623490/94‑1 (MQ=60)
    CGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATAT                                                                                          <  SRR4302543.15367/94‑1 (MQ=60)
     GGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATT                                                                                         <  SRR4302543.55173/94‑1 (MQ=60)
     GGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATT                                                                                         <  SRR4302543.2027681/94‑1 (MQ=60)
      GGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTA                                                                                        <  SRR4302543.4947987/94‑1 (MQ=60)
      GGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTA                                                                                        <  SRR4302543.2997307/94‑1 (MQ=60)
       GCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTAT                                                                                       <  SRR4302543.7371482/94‑1 (MQ=60)
       GCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTAT                                                                                       <  SRR4302543.7741978/94‑1 (MQ=60)
       GCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTAT                                                                                       >  SRR4302543.6795320/1‑94 (MQ=60)
        CATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATC                                                                                      >  SRR4302543.5585606/1‑94 (MQ=60)
        CATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATC                                                                                      >  SRR4302543.4357042/1‑94 (MQ=60)
        CATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATC                                                                                      <  SRR4302543.5257364/94‑1 (MQ=60)
        CATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATC                                                                                      >  SRR4302543.7169058/1‑94 (MQ=60)
        CATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATC                                                                                      <  SRR4302543.7318071/94‑1 (MQ=60)
        CATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATC                                                                                      <  SRR4302543.5014630/94‑1 (MQ=60)
         ATCGACGCTATTTTGAAGTGCATTACTAGCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGCAAGAGACATTACAGGTAGTGGGATATTATCG                                                                                     >  SRR4302543.3502076/1‑94 (MQ=60)
         ATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCG                                                                                     >  SRR4302543.1637153/1‑94 (MQ=60)
         ATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCG                                                                                     <  SRR4302543.4453885/94‑1 (MQ=60)
         ATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCG                                                                                     >  SRR4302543.6711819/1‑94 (MQ=60)
         ATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCG                                                                                     >  SRR4302543.1667963/1‑94 (MQ=60)
         ATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCG                                                                                     >  SRR4302543.6940382/1‑94 (MQ=60)
         ATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCG                                                                                     >  SRR4302543.7268641/1‑94 (MQ=60)
         ATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCG                                                                                     <  SRR4302543.3208489/94‑1 (MQ=60)
         ATCGACGCTATTTTGAAGGGCATTACTACCTGCAAAGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGGAGTGGGGTATTATCG                                                                                     >  SRR4302543.5015859/1‑94 (MQ=60)
           CGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTG                                                                                   >  SRR4302543.3183074/1‑94 (MQ=60)
           CGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTG                                                                                   <  SRR4302543.7754785/94‑1 (MQ=60)
           CGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTG                                                                                   <  SRR4302543.2063576/94‑1 (MQ=60)
           CGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTG                                                                                   >  SRR4302543.1583336/1‑94 (MQ=60)
            GACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGA                                                                                  >  SRR4302543.2144371/1‑94 (MQ=60)
             ACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGAT                                                                                 <  SRR4302543.1841617/94‑1 (MQ=60)
             ACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGAT                                                                                 >  SRR4302543.5894337/1‑94 (MQ=60)
             ACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGAT                                                                                 <  SRR4302543.7752461/94‑1 (MQ=60)
             ACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGAT                                                                                 <  SRR4302543.3848919/94‑1 (MQ=60)
             ACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGAT                                                                                 <  SRR4302543.7752460/94‑1 (MQ=60)
              CGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATG                                                                                <  SRR4302543.1373262/94‑1 (MQ=60)
               GCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGA                                                                               >  SRR4302543.6980105/1‑94 (MQ=60)
                CTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAA                                                                              <  SRR4302543.4564389/94‑1 (MQ=60)
                CTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAA                                                                              <  SRR4302543.4043401/94‑1 (MQ=60)
                 TATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAA                                                                             >  SRR4302543.3317910/1‑94 (MQ=60)
                 TATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAA                                                                             <  SRR4302543.4317614/94‑1 (MQ=60)
                  ATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAAT                                                                            >  SRR4302543.2731415/1‑94 (MQ=60)
                  ATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAAC                                                                            <  SRR4302543.5475950/94‑1 (MQ=60)
                  ATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAAC                                                                            <  SRR4302543.1065510/94‑1 (MQ=60)
                  ATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAAC                                                                            <  SRR4302543.5707994/94‑1 (MQ=60)
                  ATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAAC                                                                            >  SRR4302543.4498959/1‑94 (MQ=60)
                   TTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACT                                                                           >  SRR4302543.1668129/1‑94 (MQ=60)
                   TTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACT                                                                           <  SRR4302543.2197339/94‑1 (MQ=60)
                    TTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTG                                                                          <  SRR4302543.3630256/94‑1 (MQ=60)
                     TTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGA                                                                         <  SRR4302543.961841/94‑1 (MQ=60)
                      TGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGAC                                                                        <  SRR4302543.4314766/94‑1 (MQ=60)
                       GAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGGCC                                                                       >  SRR4302543.5199474/1‑94 (MQ=60)
                       GAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACC                                                                       >  SRR4302543.3592175/1‑94 (MQ=60)
                        AAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCG                                                                      <  SRR4302543.6447302/94‑1 (MQ=60)
                        AAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCG                                                                      <  SRR4302543.2197866/94‑1 (MQ=60)
                        AAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCG                                                                      <  SRR4302543.3938631/94‑1 (MQ=60)
                         AGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGT                                                                     >  SRR4302543.736875/1‑94 (MQ=60)
                          GTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTG                                                                    >  SRR4302543.5898524/1‑94 (MQ=60)
                          GTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTG                                                                    <  SRR4302543.4814551/94‑1 (MQ=60)
                          GTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTG                                                                    >  SRR4302543.5505524/1‑94 (MQ=60)
                          GTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTG                                                                    <  SRR4302543.3000622/94‑1 (MQ=60)
                           TGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGA                                                                   <  SRR4302543.8005504/94‑1 (MQ=60)
                           TGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGA                                                                   >  SRR4302543.1411060/1‑94 (MQ=60)
                           TGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGA                                                                   >  SRR4302543.2226812/1‑94 (MQ=60)
                            GCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAA                                                                  >  SRR4302543.5861414/1‑94 (MQ=60)
                             CATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAAT                                                                 >  SRR4302543.1989157/1‑94 (MQ=60)
                             CATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAAT                                                                 >  SRR4302543.3943404/1‑94 (MQ=60)
                             CATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAAT                                                                 >  SRR4302543.7930938/1‑94 (MQ=60)
                              ATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATA                                                                >  SRR4302543.5576096/1‑94 (MQ=60)
                              ATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATA                                                                >  SRR4302543.3851879/1‑94 (MQ=60)
                              ATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATA                                                                <  SRR4302543.6025823/94‑1 (MQ=60)
                              ATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATA                                                                >  SRR4302543.1327685/1‑94 (MQ=60)
                              ATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTANCNTGATGAAACTGACNGTGANTN                                                                >  SRR4302543.6269800/1‑94 (MQ=60)
                               TTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATAT                                                               >  SRR4302543.1131795/1‑94 (MQ=60)
                                 tgTACCTGGAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTT                                                             <  SRR4302543.1859421/92‑1 (MQ=60)
                                  CTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTA                                                            >  SRR4302543.70869/1‑94 (MQ=60)
                                  CTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTA                                                            >  SRR4302543.5540786/1‑94 (MQ=60)
                                   TACCTTCAAGGGCAGCAAAAAATTGAATATGCCCGGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAA                                                           <  SRR4302543.5645820/94‑1 (MQ=60)
                                   TACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAA                                                           >  SRR4302543.4105328/1‑94 (MQ=60)
                                    ACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAA                                                          <  SRR4302543.1378357/94‑1 (MQ=60)
                                    ACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAA                                                          >  SRR4302543.2800704/1‑94 (MQ=60)
                                    ACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAA                                                          <  SRR4302543.3962819/94‑1 (MQ=60)
                                    ACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAA                                                          <  SRR4302543.2545104/94‑1 (MQ=60)
                                     CCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAA                                                         <  SRR4302543.3129688/94‑1 (MQ=60)
                                      CTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAG                                                        <  SRR4302543.6359780/94‑1 (MQ=60)
                                      CTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAG                                                        <  SRR4302543.5958453/94‑1 (MQ=60)
                                       TGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGG                                                       <  SRR4302543.236821/94‑1 (MQ=60)
                                       TGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGG                                                       >  SRR4302543.6812394/1‑94 (MQ=60)
                                       TGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGG                                                       <  SRR4302543.5374118/94‑1 (MQ=60)
                                       TGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGG                                                       <  SRR4302543.2475540/94‑1 (MQ=60)
                                         CAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCT                                                     <  SRR4302543.4785979/94‑1 (MQ=60)
                                         CAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCT                                                     <  SRR4302543.5375194/94‑1 (MQ=60)
                                         CAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCT                                                     >  SRR4302543.6635240/1‑94 (MQ=60)
                                          AAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTG                                                    >  SRR4302543.4265185/1‑94 (MQ=60)
                                          AAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTG                                                    >  SRR4302543.5064483/1‑94 (MQ=60)
                                           AGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGC                                                   <  SRR4302543.6560444/94‑1 (MQ=60)
                                           AGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGAATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGC                                                   <  SRR4302543.6728657/94‑1 (MQ=60)
                                            GGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCG                                                  >  SRR4302543.103701/1‑94 (MQ=60)
                                              GCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGA                                                <  SRR4302543.3824179/94‑1 (MQ=60)
                                               CAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAG                                               >  SRR4302543.3048171/1‑94 (MQ=60)
                                                 GCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAA                                             <  SRR4302543.7432629/94‑1 (MQ=60)
                                                 GCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAA                                             <  SRR4302543.7571082/94‑1 (MQ=60)
                                                  CAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAA                                            <  SRR4302543.6985108/94‑1 (MQ=60)
                                                   AAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAAC                                           <  SRR4302543.2445520/94‑1 (MQ=60)
                                                    AAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACC                                          <  SRR4302543.5908802/94‑1 (MQ=60)
                                                    AAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACC                                          <  SRR4302543.7250353/94‑1 (MQ=60)
                                                      AAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGT                                        >  SRR4302543.1977375/1‑94 (MQ=60)
                                                       AATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGTTATTATCGTGATGAAACTGCCCGTGAATATTTAAAAGGCTGCGGAGAAACCGTT                                       >  SRR4302543.5929136/1‑94 (MQ=60)
                                                       AATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTT                                       >  SRR4302543.3748579/1‑94 (MQ=60)
                                                       AATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTT                                       >  SRR4302543.4541598/1‑94 (MQ=60)
                                                       AATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTT                                       <  SRR4302543.3621522/94‑1 (MQ=60)
                                                        ATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTG                                      >  SRR4302543.1879703/1‑94 (MQ=60)
                                                         TTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGA                                     >  SRR4302543.1709978/1‑94 (MQ=60)
                                                         TTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGA                                     >  SRR4302543.693299/1‑94 (MQ=60)
                                                         ATGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGA                                     <  SRR4302543.3673818/94‑1 (MQ=60)
                                                          TGAATATGCGCGGAAAGAGACATTACAGGTAGTGAGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAG                                    <  SRR4302543.953808/94‑1 (MQ=60)
                                                          TGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAG                                    <  SRR4302543.7193169/94‑1 (MQ=60)
                                                          TGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAG                                    <  SRR4302543.7478292/94‑1 (MQ=60)
                                                          TGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAG                                    <  SRR4302543.5870328/94‑1 (MQ=60)
                                                          TGAATATGCGCCGAAAGAGACATTAAAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAG                                    <  SRR4302543.4863631/94‑1 (MQ=60)
                                                           GAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGG                                   >  SRR4302543.3722475/1‑94 (MQ=60)
                                                            AATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGT                                  <  SRR4302543.1701551/94‑1 (MQ=60)
                                                            AATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGT                                  <  SRR4302543.6621867/94‑1 (MQ=60)
                                                             ATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTC                                 >  SRR4302543.4486404/1‑94 (MQ=60)
                                                             ATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTC                                 <  SRR4302543.825143/94‑1 (MQ=60)
                                                             ATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTC                                 >  SRR4302543.5908527/1‑94 (MQ=60)
                                                               ATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCA                               >  SRR4302543.3063075/1‑94 (MQ=60)
                                                               ATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCA                               >  SRR4302543.900801/1‑94 (MQ=60)
                                                               ATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCA                               <  SRR4302543.281641/94‑1 (MQ=60)
                                                                TGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCAC                              <  SRR4302543.7009580/94‑1 (MQ=60)
                                                                TGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCAC                              <  SRR4302543.4659131/94‑1 (MQ=60)
                                                                 GCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACG                             >  SRR4302543.1469104/1‑94 (MQ=60)
                                                                 GCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACG                             <  SRR4302543.1348820/94‑1 (MQ=60)
                                                                  CGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGA                            <  SRR4302543.7555770/94‑1 (MQ=60)
                                                                    CCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAG                          <  SRR4302543.4744609/94‑1 (MQ=60)
                                                                    CCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAG                          <  SRR4302543.528786/94‑1 (MQ=60)
                                                                    CCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAG                          <  SRR4302543.3028959/94‑1 (MQ=60)
                                                                     CGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGG                         >  SRR4302543.3774036/1‑94 (MQ=60)
                                                                      GAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGG                        <  SRR4302543.5991350/94‑1 (MQ=60)
                                                                      GAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGG                        <  SRR4302543.4483081/94‑1 (MQ=60)
                                                                      GAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGG                        >  SRR4302543.5316695/1‑94 (MQ=60)
                                                                       AAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGC                       >  SRR4302543.5692352/1‑94 (MQ=60)
                                                                       AAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGC                       >  SRR4302543.6372308/1‑94 (MQ=60)
                                                                       AAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGA                       >  SRR4302543.3209991/1‑94 (MQ=60)
                                                                        AAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCA                      <  SRR4302543.4643495/94‑1 (MQ=60)
                                                                         AGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAA                     >  SRR4302543.801670/1‑94 (MQ=60)
                                                                         AGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAA                     >  SRR4302543.4248588/1‑94 (MQ=60)
                                                                         AGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAA                     >  SRR4302543.4837987/1‑94 (MQ=60)
                                                                           AGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGCAACCGTTGAGGTCCACGcaggcaaaat                   >  SRR4302543.5942602/1‑84 (MQ=60)
                                                                           AGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAAT                   >  SRR4302543.3626451/1‑94 (MQ=60)
                                                                           AGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAAT                   <  SRR4302543.4925239/94‑1 (MQ=60)
                                                                           AGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAAT                   >  SRR4302543.5942603/1‑94 (MQ=60)
                                                                           AGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAAT                   >  SRR4302543.5898162/1‑94 (MQ=60)
                                                                           AGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAAT                   <  SRR4302543.5539528/94‑1 (MQ=60)
                                                                           AGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAAT                   <  SRR4302543.5539527/94‑1 (MQ=60)
                                                                           AGACATTACAGGTAGTGGGATATTAGCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAAT                   <  SRR4302543.4925238/94‑1 (MQ=60)
                                                                           AGACATACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATC                  <  SRR4302543.5230918/94‑1 (MQ=60)
                                                                            GACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATC                  <  SRR4302543.2126972/94‑1 (MQ=60)
                                                                            GACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATC                  >  SRR4302543.1697791/1‑94 (MQ=60)
                                                                             ACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCG                 <  SRR4302543.7418363/94‑1 (MQ=60)
                                                                             ACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCG                 >  SRR4302543.1468091/1‑94 (MQ=60)
                                                                              CATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGT                >  SRR4302543.7727082/1‑94 (MQ=60)
                                                                              CATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGT                >  SRR4302543.61570/1‑94 (MQ=60)
                                                                               ATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTT               <  SRR4302543.1159426/94‑1 (MQ=60)
                                                                               ATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTT               >  SRR4302543.2383926/1‑94 (MQ=60)
                                                                               ATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTT               >  SRR4302543.2703070/1‑94 (MQ=60)
                                                                               ATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTT               >  SRR4302543.7259715/1‑94 (MQ=60)
                                                                               ATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTT               >  SRR4302543.2991608/1‑94 (MQ=60)
                                                                               ATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTT               >  SRR4302543.1371670/1‑94 (MQ=60)
                                                                                TTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTA              <  SRR4302543.3566139/94‑1 (MQ=60)
                                                                                 TACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTAT             >  SRR4302543.5002070/1‑94 (MQ=60)
                                                                                 TACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTAT             <  SRR4302543.5903715/94‑1 (MQ=60)
                                                                                  ACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATT            >  SRR4302543.6257474/1‑94 (MQ=60)
                                                                                  ACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATT            <  SRR4302543.1966240/94‑1 (MQ=60)
                                                                                  ACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATT            >  SRR4302543.4730838/1‑94 (MQ=60)
                                                                                   CAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTT           <  SRR4302543.5485834/94‑1 (MQ=60)
                                                                                   CAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTT           <  SRR4302543.137022/94‑1 (MQ=60)
                                                                                    AGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTG          <  SRR4302543.7058080/94‑1 (MQ=60)
                                                                                    AGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTG          <  SRR4302543.5631601/94‑1 (MQ=60)
                                                                                    AGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTG          <  SRR4302543.7810891/94‑1 (MQ=60)
                                                                                      GTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCG        <  SRR4302543.6227460/94‑1 (MQ=60)
                                                                                        AGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGAT      >  SRR4302543.1086880/1‑94 (MQ=60)
                                                                                        AGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGAT      >  SRR4302543.5883800/1‑94 (MQ=60)
                                                                                        AGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGAT      <  SRR4302543.410194/94‑1 (MQ=60)
                                                                                         GTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATA     <  SRR4302543.7462282/94‑1 (MQ=60)
                                                                                          TGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATAT    >  SRR4302543.5434619/1‑94 (MQ=60)
                                                                                          TGGAATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATAT    >  SRR4302543.5556728/1‑94 (MQ=60)
                                                                                           GGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATC   <  SRR4302543.6932406/94‑1 (MQ=60)
                                                                                            GGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCC  <  SRR4302543.2331426/94‑1 (MQ=60)
                                                                                            GGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCC  <  SRR4302543.7808127/94‑1 (MQ=60)
                                                                                            GGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCC  >  SRR4302543.1685413/1‑94 (MQ=60)
                                                                                             |                                                                                            
TTACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGAATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCC  >  NC_000913/3223538‑3223723

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: