Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,223,631 |
A→G |
E90G (GAA→GGA) |
ebgC → |
evolved beta‑D‑galactosidase beta subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,223,631 | 0 | A | G | 100.0%
| 737.1
/ NA
| 230 | E90G (GAA→GGA) | ebgC | evolved beta‑D‑galactosidase beta subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (99/131); total (99/131) |
Only 100 of 234 total aligned reads displayed.
CCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGAATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATA > NC_000913/3223541‑3223720
|
ccGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGat < 2:3205504/93‑1 (MQ=255)
gggCATCGACGCTATTTTGAATTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGGAGGGGGatat > 1:127062/1‑93 (MQ=255)
ggCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGAtatt < 1:4616801/93‑1 (MQ=255)
gCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGAtatta < 1:3867340/93‑1 (MQ=255)
gCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGAtatta > 1:4488385/1‑93 (MQ=255)
cATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGAtattat < 2:795629/93‑1 (MQ=255)
cATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGAtattat < 1:1329540/93‑1 (MQ=255)
aTCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATc < 2:4321981/93‑1 (MQ=255)
gACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGtg > 1:4216839/1‑93 (MQ=255)
gACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGtg > 2:2949100/1‑93 (MQ=255)
gACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATAGTATCGtg > 1:2478167/1‑93 (MQ=255)
aCGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGtga < 2:2069658/93‑1 (MQ=255)
cGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGtgat < 2:3840011/93‑1 (MQ=255)
cGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGtgat < 1:3650754/93‑1 (MQ=255)
cGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGtgat < 2:2023456/93‑1 (MQ=255)
gCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGtgatg > 1:3700419/1‑93 (MQ=255)
cTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGtgatga < 2:4140033/93‑1 (MQ=255)
cTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGtgatga > 2:569945/1‑93 (MQ=255)
tATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGaa > 2:2585351/1‑93 (MQ=255)
aTTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGaaa < 2:119908/93‑1 (MQ=255)
aTTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGaaa > 1:1813540/1‑93 (MQ=255)
ttttGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAAc < 1:1692459/93‑1 (MQ=255)
tGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGa < 2:2720566/93‑1 (MQ=255)
tGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGa < 1:2864080/93‑1 (MQ=255)
gAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGAc < 2:524135/93‑1 (MQ=255)
gAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGAc > 1:3362422/1‑93 (MQ=255)
aaGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGAcc > 1:4409988/1‑93 (MQ=255)
aGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCg < 1:3500112/93‑1 (MQ=255)
tGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTg > 1:3344882/1‑93 (MQ=255)
tGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTg > 2:3494466/1‑93 (MQ=255)
cATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGaa < 2:3479472/93‑1 (MQ=255)
aTTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAat > 2:3331811/1‑93 (MQ=255)
ttACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAata > 1:3938938/1‑93 (MQ=255)
ttACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAata < 2:858192/93‑1 (MQ=255)
ctacCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATAttt < 1:4006973/93‑1 (MQ=255)
tacCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTa > 1:1115/1‑93 (MQ=255)
tacCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTa < 1:2398302/93‑1 (MQ=255)
tacCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTa > 2:2439869/1‑93 (MQ=255)
acCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTaa < 1:4555706/93‑1 (MQ=255)
ccTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTaaa < 1:156579/93‑1 (MQ=255)
cTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTaaaa > 1:3681045/1‑93 (MQ=255)
cTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTaaaa < 1:1163345/93‑1 (MQ=255)
cTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTaaaa < 1:511974/93‑1 (MQ=255)
cTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTaaaa < 2:2276352/93‑1 (MQ=255)
tGCAAGGGCAGCAAAAAATTGAAGATGCGCCGAAAGAGACATTACAGGTAGTCGAACAATATCGTGATGAAACTGACCATGAATATTTAAAAg < 2:2942215/93‑1 (MQ=255)
gCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAgg > 1:723426/1‑93 (MQ=255)
gCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAga > 2:2470450/1‑92 (MQ=255)
cAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGc < 2:2748949/93‑1 (MQ=255)
cAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGc < 1:3096656/93‑1 (MQ=255)
aaGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCt < 2:3556312/93‑1 (MQ=255)
gggCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGc < 2:4410912/93‑1 (MQ=255)
gggCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGc < 1:267869/93‑1 (MQ=255)
ggCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCg < 1:2242097/93‑1 (MQ=255)
cagcaAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGga < 1:1087349/93‑1 (MQ=255)
cagcaAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGga < 2:4483407/93‑1 (MQ=255)
cagcaAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGga < 2:1023948/93‑1 (MQ=255)
aaaaaaTTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGaaa < 1:815244/93‑1 (MQ=255)
aaaaaTTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAAc < 2:1256894/93‑1 (MQ=255)
aaaaaTTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAAc < 2:1701161/93‑1 (MQ=255)
aaaaaTTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAAc < 1:2183197/93‑1 (MQ=255)
aaaaTTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAAcc > 2:4089823/1‑93 (MQ=255)
aaaTTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCg < 1:2791465/93‑1 (MQ=255)
aaTTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGt > 2:4625075/1‑93 (MQ=255)
aaTTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGt < 1:2581170/93‑1 (MQ=255)
aaTTGAATATGCGCCGAAAGAGACATTACAGGAAGGGGGATATTATCGTGATGAAACTGACCGTGAATATTTACAAGGCTGCGGAGAAACCGt > 2:1513694/1‑93 (MQ=255)
aaTATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAgg < 1:2094539/93‑1 (MQ=255)
aaTATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAgg > 1:3859215/1‑93 (MQ=255)
atatGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGt < 2:3420474/93‑1 (MQ=255)
atatGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGt > 1:4058614/1‑93 (MQ=255)
tatGTGCAGAAAGAGATATTACAGGTAGTGGGATATTATCGTGATGAACCTGACCGTAAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTc < 2:2923656/93‑1 (MQ=255)
tatGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTc > 1:4155943/1‑93 (MQ=255)
gcgcCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCAc < 1:3275353/93‑1 (MQ=255)
ccGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGaa < 2:1496515/93‑1 (MQ=255)
gAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAgg < 2:2199452/93‑1 (MQ=255)
gAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAgg > 2:4457572/1‑93 (MQ=255)
gAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAgg < 1:3568025/93‑1 (MQ=255)
aaaGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAggg < 2:717335/93‑1 (MQ=255)
aaaGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAggg < 1:638349/93‑1 (MQ=255)
aaaGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAggg > 2:3048751/1‑93 (MQ=255)
aaaGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAggg > 1:1235501/1‑93 (MQ=255)
aaaGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAggg > 1:1744590/1‑93 (MQ=255)
aaaGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAAAAACCGTTGAGGTCCACGAAggg > 2:1847933/1‑93 (MQ=255)
aaaGAGACATTACAGGTAGTGGGATATTATCGTGATGAAAATGACCGTGAATATTTAAAAGGATGCGGAGAAACCGTTGAGGTCCACGAAggg > 2:232827/1‑93 (MQ=255)
agagACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCa > 2:282789/1‑93 (MQ=255)
agagACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCa > 1:927312/1‑93 (MQ=255)
agagACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCa < 2:1366631/93‑1 (MQ=255)
agaCATTACAGGTAGTGGGATATTATCGTGATGAAACTGGCCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCaaa < 2:4652426/93‑1 (MQ=255)
gaCATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAACATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAAt < 2:3779916/93‑1 (MQ=255)
aCATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATc > 2:1801086/1‑93 (MQ=255)
aCATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATc < 1:2217337/93‑1 (MQ=255)
aTTACAGGTAGTGGGATATTATCGAGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGt > 1:3391385/1‑93 (MQ=255)
aCAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTAt < 2:1425530/93‑1 (MQ=255)
cAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAATGGCAAATCGTTAtt > 2:2864157/1‑93 (MQ=255)
aGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTAttt < 1:153080/93‑1 (MQ=255)
aGGAAGTGGGATATTAGCGTGATGAAACGGACCGGGAAAATTGAAAAGGCTGCGGAGAAACCGTGGAGGTCCAAGAAGGGCAAATCGTTAttt < 2:1234667/93‑1 (MQ=255)
gTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGc > 2:1994691/1‑93 (MQ=255)
aGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGa < 1:2960030/93‑1 (MQ=255)
gTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGat < 2:4015600/93‑1 (MQ=255)
gTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGat > 1:1858110/1‑93 (MQ=255)
tGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGata < 2:684816/93‑1 (MQ=255)
|
CCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGAATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATA > NC_000913/3223541‑3223720
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGAATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCCA > NC_000913/3223538‑3223724
|
TTACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGG < SRR4302535.3987720/94‑1 (MQ=60)
ACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGAT < SRR4302535.158630/94‑1 (MQ=60)
ACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGAT < SRR4302535.2977500/94‑1 (MQ=60)
CGGGCATCGACGCTATTTTGAATTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGGAGGGGGATAT > SRR4302535.127957/1‑94 (MQ=60)
CGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATAT < SRR4302535.1730068/94‑1 (MQ=60)
CGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATAT > SRR4302535.181321/1‑94 (MQ=60)
GGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTA > SRR4302535.4519196/1‑94 (MQ=60)
GGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTA > SRR4302535.4617794/1‑94 (MQ=60)
GGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTA < SRR4302535.4648177/94‑1 (MQ=60)
GCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTAT < SRR4302535.3893930/94‑1 (MQ=60)
GCATCGACGCTAATTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTAT < SRR4302535.420171/94‑1 (MQ=60)
CATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATC < SRR4302535.3343044/94‑1 (MQ=60)
CATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATC < SRR4302535.1339023/94‑1 (MQ=60)
ATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCG < SRR4302535.4161695/94‑1 (MQ=60)
CGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTG > SRR4302535.4245694/1‑94 (MQ=60)
CGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTG > SRR4302535.3872356/1‑94 (MQ=60)
CGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATAGTATCGTG > SRR4302535.2496040/1‑94 (MQ=60)
GACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGA > SRR4302535.119269/1‑94 (MQ=60)
CGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATG < SRR4302535.3676031/94‑1 (MQ=60)
CGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATG > SRR4302535.3726052/1‑94 (MQ=60)
GCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGA > SRR4302535.3703614/1‑94 (MQ=60)
CTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAA > SRR4302535.1379693/1‑94 (MQ=60)
CTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAA < SRR4302535.3523944/94‑1 (MQ=60)
TATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAA > SRR4302535.776061/1‑94 (MQ=60)
TATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAA > SRR4302535.3405558/1‑94 (MQ=60)
TATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAA > SRR4302535.1826654/1‑94 (MQ=60)
TATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAA > SRR4302535.536087/1‑94 (MQ=60)
ATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAAC < SRR4302535.1268331/94‑1 (MQ=60)
TTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACT < SRR4302535.109550/94‑1 (MQ=60)
TTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACT < SRR4302535.1704701/94‑1 (MQ=60)
TTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTG > SRR4302535.2589951/1‑94 (MQ=60)
TGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGAC > SRR4302535.3385819/1‑94 (MQ=60)
TGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGAC < SRR4302535.2884372/94‑1 (MQ=60)
GAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACC > SRR4302535.4440167/1‑94 (MQ=60)
AAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCG < SRR4302535.3148221/94‑1 (MQ=60)
AGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGT < SRR4302535.3524446/94‑1 (MQ=60)
AGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGGAGTGGGATATTATCGTGATGAAACTGACCGT > SRR4302535.3569941/1‑94 (MQ=60)
GTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTG > SRR4302535.3368180/1‑94 (MQ=60)
TGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAACCTGACCGTGA > SRR4302535.4223739/1‑94 (MQ=60)
TGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGA > SRR4302535.1471229/1‑94 (MQ=60)
CATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAAT < SRR4302535.3973753/94‑1 (MQ=60)
CATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAAT > SRR4302535.1313828/1‑94 (MQ=60)
CATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAAT > SRR4302535.4309466/1‑94 (MQ=60)
ATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATA > SRR4302535.3965819/1‑94 (MQ=60)
ATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATA < SRR4302535.867866/94‑1 (MQ=60)
ACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTT > SRR4302535.2841042/1‑94 (MQ=60)
CTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTA < SRR4302535.4034388/94‑1 (MQ=60)
CTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTA > SRR4302535.1129/1‑94 (MQ=60)
CTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTA > SRR4302535.1576580/1‑94 (MQ=60)
TACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAA > SRR4302535.577657/1‑94 (MQ=60)
TACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAA < SRR4302535.2415546/94‑1 (MQ=60)
ACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAA < SRR4302535.36766/94‑1 (MQ=60)
ACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAA < SRR4302535.4586821/94‑1 (MQ=60)
ACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAA > SRR4302535.2523206/1‑94 (MQ=60)
CCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAA > SRR4302535.3706521/1‑94 (MQ=60)
CCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAA < SRR4302535.157686/94‑1 (MQ=60)
CTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAG < SRR4302535.1171655/94‑1 (MQ=60)
CTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAG < SRR4302535.4659770/94‑1 (MQ=60)
CTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAG < SRR4302535.515552/94‑1 (MQ=60)
TGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGG > SRR4302535.728505/1‑94 (MQ=60)
CAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCT < SRR4302535.3118220/94‑1 (MQ=60)
CAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCT > SRR4302535.4043853/1‑94 (MQ=60)
AAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTG < SRR4302535.2133666/94‑1 (MQ=60)
GGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCG < SRR4302535.370855/94‑1 (MQ=60)
GGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCG < SRR4302535.269730/94‑1 (MQ=60)
GGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGG < SRR4302535.2258047/94‑1 (MQ=60)
CAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAG < SRR4302535.1095080/94‑1 (MQ=60)
AAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAAC < SRR4302535.820960/94‑1 (MQ=60)
AAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAAC < SRR4302535.903517/94‑1 (MQ=60)
AAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACC < SRR4302535.2198765/94‑1 (MQ=60)
AAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCG > SRR4302535.2745759/1‑94 (MQ=60)
AAAATGGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCG < SRR4302535.4012324/94‑1 (MQ=60)
AAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGT > SRR4302535.2884524/1‑94 (MQ=60)
AAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGT < SRR4302535.2811331/94‑1 (MQ=60)
AATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTT < SRR4302535.2599711/94‑1 (MQ=60)
ATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTG > SRR4302535.18358/1‑94 (MQ=60)
ATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTG > SRR4302535.1722191/1‑94 (MQ=60)
TTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGA > SRR4302535.3241716/1‑94 (MQ=60)
GAATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGG > SRR4302535.3885775/1‑94 (MQ=60)
AATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGT < SRR4302535.3632978/94‑1 (MQ=60)
AATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGT > SRR4302535.4086393/1‑94 (MQ=60)
AATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGT < SRR4302535.4549040/94‑1 (MQ=60)
AATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGT < SRR4302535.2109640/94‑1 (MQ=60)
ATATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTC > SRR4302535.4184394/1‑94 (MQ=60)
TATGCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTAC > SRR4302535.2290608/1‑94 (MQ=60)
GCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACG > SRR4302535.681305/1‑94 (MQ=60)
GCGCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACG < SRR4302535.3298103/94‑1 (MQ=60)
GCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAA > SRR4302535.3913030/1‑94 (MQ=60)
GCCGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAA < SRR4302535.3013161/94‑1 (MQ=60)
CGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGG > SRR4302535.3764737/1‑94 (MQ=60)
CGAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGG < SRR4302535.2245418/94‑1 (MQ=60)
GAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGG < SRR4302535.3592766/94‑1 (MQ=60)
GAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGG > SRR4302535.1244329/1‑94 (MQ=60)
GAAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGG > SRR4302535.1757214/1‑94 (MQ=60)
AAAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGC < SRR4302535.642811/94‑1 (MQ=60)
AAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCA > SRR4302535.933878/1‑94 (MQ=60)
AAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCA < SRR4302535.1211879/94‑1 (MQ=60)
AAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCA < SRR4302535.453314/94‑1 (MQ=60)
AAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCA > SRR4302535.3887777/1‑94 (MQ=60)
AAGAGACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCA < SRR4302535.3375216/94‑1 (MQ=60)
GACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATC > SRR4302535.339021/1‑94 (MQ=60)
ACATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCG < SRR4302535.2233118/94‑1 (MQ=60)
CATTACAGGTAGTGGGATATTATCGAGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGT > SRR4302535.3414979/1‑94 (MQ=60)
ATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTT < SRR4302535.1882882/94‑1 (MQ=60)
ATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTT < SRR4302535.1682802/94‑1 (MQ=60)
ATTACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTT < SRR4302535.2219407/94‑1 (MQ=60)
TACAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTAT > SRR4302535.245676/1‑94 (MQ=60)
CAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTT < SRR4302535.2026370/94‑1 (MQ=60)
CAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTT < SRR4302535.4473242/94‑1 (MQ=60)
CAGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTT < SRR4302535.2828992/94‑1 (MQ=60)
AGGTAGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTG < SRR4302535.154154/94‑1 (MQ=60)
AGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGAT > SRR4302535.1871509/1‑94 (MQ=60)
AGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGAT < SRR4302535.2980813/94‑1 (MQ=60)
AGTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGAT > SRR4302535.1149573/1‑94 (MQ=60)
GTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATA > SRR4302535.2235128/1‑94 (MQ=60)
GTGGGATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATA > SRR4302535.2689872/1‑94 (MQ=60)
GATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCCA > SRR4302535.425134/1‑94 (MQ=60)
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TTACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGAATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCCA > NC_000913/3223538‑3223724
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
