Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,233,455 T→C D21G (GAC→GGC)  b3084 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,233,4550TC100.0% 968.1 / NA 307D21G (GAC→GGC) b3084hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (150/157);  total (150/157)

Only 100 of 316 total aligned reads displayed.

AGGATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGTCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGAC  >  NC_000913/3233365‑3233544
                                                                                          |                                                                                         
aGGATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCa                                                                                         >  1:4481165/1‑93 (MQ=255)
  gATCAACCCCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATc                                                                                       <  1:6303871/93‑1 (MQ=255)
  gATCAACACCGGGCCGCGGATTCCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATc                                                                                       >  1:100759/1‑93 (MQ=255)
   aTCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATcc                                                                                      >  2:5573192/1‑93 (MQ=255)
   aTCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATcc                                                                                      <  2:7364874/93‑1 (MQ=255)
    tCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCg                                                                                     >  2:5422854/1‑93 (MQ=255)
     cAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGCTAAGGCCATCCgc                                                                                    >  2:6954862/1‑92 (MQ=255)
      aaCACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTc                                                                                   >  2:3107349/1‑93 (MQ=255)
      aaCACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTc                                                                                   >  1:6524677/1‑93 (MQ=255)
      aaCACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTc                                                                                   <  2:7715207/93‑1 (MQ=255)
       acacCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCg                                                                                  >  1:7796066/1‑93 (MQ=255)
       acacCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCg                                                                                  >  1:6232285/1‑93 (MQ=255)
         acCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGcc                                                                                <  1:2335671/93‑1 (MQ=255)
         acCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGcc                                                                                >  1:464456/1‑93 (MQ=255)
         acCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGcc                                                                                >  2:1092216/1‑93 (MQ=255)
              gCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGaaa                                                                           >  2:5391934/1‑93 (MQ=255)
              gCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGCTAACGCCATCCGTCGCCGGaaa                                                                           >  2:1471422/1‑93 (MQ=255)
               ccGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGaaaa                                                                          <  2:6696307/93‑1 (MQ=255)
                 gcgGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACg                                                                        >  1:3049376/1‑93 (MQ=255)
                   ggATTTCTGTTTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGtt                                                                      <  1:7320647/93‑1 (MQ=255)
                    gATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTg                                                                     >  1:6180660/1‑93 (MQ=255)
                    gATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTg                                                                     >  2:4733583/1‑93 (MQ=255)
                    gATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTg                                                                     <  1:2161314/93‑1 (MQ=255)
                     aTTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGt                                                                    <  1:6765607/93‑1 (MQ=255)
                     aTTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGt                                                                    <  1:2621009/93‑1 (MQ=255)
                      tttCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTa                                                                   >  2:33928/1‑93 (MQ=255)
                       ttCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAg                                                                  <  1:5134407/93‑1 (MQ=255)
                        tCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAgt                                                                 <  2:7572067/93‑1 (MQ=255)
                         cTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAgtg                                                                >  2:4642390/1‑93 (MQ=255)
                         cTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAgtg                                                                >  1:1917474/1‑93 (MQ=255)
                          tgtgTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCGGTCGCCGGAAAACGTTGTAgtgt                                                               >  2:4282567/1‑93 (MQ=255)
                           gtgtCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTc                                                              >  2:7450035/1‑93 (MQ=255)
                            tgtCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCa                                                             <  1:2555703/93‑1 (MQ=255)
                            tgtCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCa                                                             <  1:587974/93‑1 (MQ=255)
                               cgtcCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTg                                                          <  2:3497600/93‑1 (MQ=255)
                               cgtcCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTg                                                          <  1:7517359/93‑1 (MQ=255)
                                gtcCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGa                                                         <  2:5721278/93‑1 (MQ=255)
                                 tcCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGaa                                                        <  2:203434/93‑1 (MQ=255)
                                  ccAACTGTTGCAGCAAATATTCATCCGCCGCTTCTCACGCCTGTTGCGGGTTACAGCCATCCGTCGCCGGAAGACGATGTAGTGTCAGTGAAc                                                       >  2:226424/1‑93 (MQ=255)
                                  ccAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAAc                                                       <  2:5678818/93‑1 (MQ=255)
                                    aaCTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACgg                                                     >  1:7686284/1‑93 (MQ=255)
                                     aCTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGa                                                    >  1:2836883/1‑93 (MQ=255)
                                       tGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGaaa                                                  <  1:963045/93‑1 (MQ=255)
                                       tGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGaaa                                                  >  2:1980157/1‑93 (MQ=255)
                                       ggTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGaaa                                                  <  1:6087689/92‑1 (MQ=255)
                                        gTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAAc                                                 >  1:6164610/1‑93 (MQ=255)
                                         ttGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAAcc                                                >  1:2470567/1‑93 (MQ=255)
                                         ttGCAGAAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAAcc                                                <  1:5992649/93‑1 (MQ=255)
                                             agcaAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTg                                            >  1:1537980/1‑93 (MQ=255)
                                              gcaAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGt                                           >  2:1596573/1‑93 (MQ=255)
                                               caAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTc                                          >  1:4193785/1‑93 (MQ=255)
                                               caAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTc                                          <  1:3994559/93‑1 (MQ=255)
                                                 aaTATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTa                                        >  2:4520882/1‑93 (MQ=255)
                                                   tatTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAg                                      >  1:1027878/1‑93 (MQ=255)
                                                     ttCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTg                                    >  2:2165076/1‑93 (MQ=255)
                                                     ttCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTg                                    <  2:2684118/93‑1 (MQ=255)
                                                     ttCATACGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTg                                    >  1:2933651/1‑93 (MQ=255)
                                                      tCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTgg                                   >  1:3302822/1‑93 (MQ=255)
                                                        aTCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCt                                 <  2:1340936/93‑1 (MQ=255)
                                                          ccgccgCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCa                               <  1:3424181/93‑1 (MQ=255)
                                                          ccgccgCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCa                               <  1:52811/93‑1 (MQ=255)
                                                           cgccgcTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCAt                              >  2:2445910/1‑93 (MQ=255)
                                                           cgccgcTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCAt                              <  2:3748156/93‑1 (MQ=255)
                                                            gccgcTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATc                             >  1:7357481/1‑93 (MQ=255)
                                                            gccgcTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATc                             >  2:5889856/1‑93 (MQ=255)
                                                            gccgcTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATc                             <  2:4140076/93‑1 (MQ=255)
                                                               gcTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGc                          >  1:2987406/1‑93 (MQ=255)
                                                                cTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGcc                         >  2:6059760/1‑93 (MQ=255)
                                                                 ttCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGccc                        >  2:2631262/1‑93 (MQ=255)
                                                                 ttCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGccc                        <  2:5082024/93‑1 (MQ=255)
                                                                  tCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCcct                       <  1:3730881/93‑1 (MQ=255)
                                                                  tCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCcct                       <  2:6797810/93‑1 (MQ=255)
                                                                    ccACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCcctcc                     <  2:3277707/93‑1 (MQ=255)
                                                                    ccACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCcctcc                     >  1:3862075/1‑93 (MQ=255)
                                                                     cACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCcctcct                    >  2:6344540/1‑93 (MQ=255)
                                                                      aCGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTg                   <  2:598358/93‑1 (MQ=255)
                                                                      aCGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTg                   >  1:3367008/1‑93 (MQ=255)
                                                                      aCGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGCGGCTCATCGGCCCTCCTg                   >  1:811584/1‑93 (MQ=255)
                                                                       cGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGa                  >  2:12489/1‑93 (MQ=255)
                                                                       cGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGa                  >  1:755080/1‑93 (MQ=255)
                                                                        gCCGGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGaa                 <  2:286666/93‑1 (MQ=255)
                                                                          cTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATg               >  1:362383/1‑93 (MQ=255)
                                                                           tGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGa              <  2:878059/93‑1 (MQ=255)
                                                                           tGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGa              >  1:3930947/1‑93 (MQ=255)
                                                                           tGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGa              >  2:2331761/1‑93 (MQ=255)
                                                                           tGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGa              >  2:3169543/1‑93 (MQ=255)
                                                                               gCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAGCGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATaaa          >  2:4670545/1‑93 (MQ=255)
                                                                                cGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATaaaa         <  2:6155849/93‑1 (MQ=255)
                                                                                 gggTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAAt        <  1:1174021/93‑1 (MQ=255)
                                                                                 gggTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAAt        <  2:4989313/93‑1 (MQ=255)
                                                                                 cggTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAAt        <  1:6690599/92‑1 (MQ=255)
                                                                                  ggTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAAtt       >  2:795982/1‑93 (MQ=255)
                                                                                   gTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAAttt      >  1:6937160/1‑93 (MQ=255)
                                                                                   gTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAAttt      <  1:1068252/93‑1 (MQ=255)
                                                                                      aaCGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCTTCCTGAATGATAAAATTTCGa   <  1:1407590/93‑1 (MQ=255)
                                                                                      aaCGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGa   <  2:3686019/93‑1 (MQ=255)
                                                                                       aCGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGAc  <  1:5530801/93‑1 (MQ=255)
                                                                                       aCGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGAc  <  2:3821314/93‑1 (MQ=255)
                                                                                       aCGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGAc  >  1:7152126/1‑93 (MQ=255)
                                                                                       aCGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGAc  >  2:7239818/1‑93 (MQ=255)
                                                                                          |                                                                                         
AGGATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGTCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGAC  >  NC_000913/3233365‑3233544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TCAGGATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGTCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTG  >  NC_000913/3233363‑3233548
                                                                                            |                                                                                             
TCAGGATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCC                                                                                              <  SRR4302543.4581004/94‑1 (MQ=60)
TCAGGATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCC                                                                                              <  SRR4302543.529880/94‑1 (MQ=60)
 CAGGATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCA                                                                                             >  SRR4302543.4521860/1‑94 (MQ=60)
 CAGGATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCA                                                                                             >  SRR4302543.3414788/1‑94 (MQ=60)
  AGTATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCAT                                                                                            <  SRR4302543.1086666/94‑1 (MQ=60)
  AGGATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCAT                                                                                            <  SRR4302543.6734397/94‑1 (MQ=60)
  AGGATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCAT                                                                                            <  SRR4302543.3709065/94‑1 (MQ=60)
   GGATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATC                                                                                           <  SRR4302543.7408360/94‑1 (MQ=60)
   GGATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATC                                                                                           >  SRR4302543.6989591/1‑94 (MQ=60)
   GGATCAACACCGGGCCGCGGATTCCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATC                                                                                           >  SRR4302543.101695/1‑94 (MQ=60)
    GATCAACCCCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCC                                                                                          <  SRR4302543.6363174/94‑1 (MQ=60)
    GATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCC                                                                                          <  SRR4302543.3419636/94‑1 (MQ=60)
    GATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCC                                                                                          <  SRR4302543.6181376/94‑1 (MQ=60)
     ATCAACCCCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCG                                                                                         <  SRR4302543.6059810/94‑1 (MQ=60)
     ATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCG                                                                                         <  SRR4302543.5666557/94‑1 (MQ=60)
     ATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCG                                                                                         >  SRR4302543.7527460/1‑94 (MQ=60)
      TCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGT                                                                                        <  SRR4302543.7656957/94‑1 (MQ=60)
       CAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTC                                                                                       >  SRR4302543.6586114/1‑94 (MQ=60)
       CAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTC                                                                                       >  SRR4302543.6586116/1‑94 (MQ=60)
        AACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCG                                                                                      >  SRR4302543.6291104/1‑94 (MQ=60)
        AACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCG                                                                                      >  SRR4302543.7869528/1‑94 (MQ=60)
          CACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCC                                                                                    >  SRR4302543.468779/1‑94 (MQ=60)
          CACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCC                                                                                    <  SRR4302543.5807665/94‑1 (MQ=60)
          CACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCC                                                                                    >  SRR4302543.3840716/1‑94 (MQ=60)
           CCCGGGCCGGGGTTTTCTGTGTCGTCCAACTGTTGCAGCCAATATTCATCCGCCGCTGCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCG                                                                                   <  SRR4302543.2356863/94‑1 (MQ=60)
           ACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCG                                                                                   <  SRR4302543.2356864/94‑1 (MQ=60)
           ACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCG                                                                                   >  SRR4302543.522355/1‑94 (MQ=60)
            CCGGGCCGCGGATTTCTGTGTCGTCCAACTATTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGG                                                                                  >  SRR4302543.3049791/1‑94 (MQ=60)
             CGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGA                                                                                 <  SRR4302543.6357263/94‑1 (MQ=60)
              GGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAA                                                                                >  SRR4302543.3634843/1‑94 (MQ=60)
                GCTGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATTCGTCGCCGGAAAA                                                                              >  SRR4302543.7111768/1‑94 (MQ=60)
                 CCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAAC                                                                             <  SRR4302543.1274484/94‑1 (MQ=60)
                  CGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACG                                                                            >  SRR4302543.3076852/1‑94 (MQ=60)
                     GGATTTCTGTTTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTG                                                                         <  SRR4302543.7391158/94‑1 (MQ=60)
                     GGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTG                                                                         >  SRR4302543.461960/1‑94 (MQ=60)
                     GGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTG                                                                         >  SRR4302543.6239080/1‑94 (MQ=60)
                     GGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTG                                                                         >  SRR4302543.6233509/1‑94 (MQ=60)
                      GATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGT                                                                        <  SRR4302543.2180677/94‑1 (MQ=60)
                       ATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTA                                                                       <  SRR4302543.2644755/94‑1 (MQ=60)
                       ATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTA                                                                       <  SRR4302543.6829500/94‑1 (MQ=60)
                        TTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAG                                                                      <  SRR4302543.2601805/94‑1 (MQ=60)
                         TTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGT                                                                     >  SRR4302543.6439166/1‑94 (MQ=60)
                         TTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGT                                                                     <  SRR4302543.5180818/94‑1 (MQ=60)
                         TTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGT                                                                     <  SRR4302543.2307639/94‑1 (MQ=60)
                          TCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTG                                                                    >  SRR4302543.1934761/1‑94 (MQ=60)
                           CTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGT                                                                   <  SRR4302543.7398242/94‑1 (MQ=60)
                            TGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTC                                                                  >  SRR4302543.1017297/1‑94 (MQ=60)
                             GTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCA                                                                 >  SRR4302543.6273184/1‑94 (MQ=60)
                              TGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAG                                                                <  SRR4302543.1985640/94‑1 (MQ=60)
                              TGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAG                                                                <  SRR4302543.2579069/94‑1 (MQ=60)
                              TGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAG                                                                <  SRR4302543.6342849/94‑1 (MQ=60)
                              TGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAG                                                                <  SRR4302543.593350/94‑1 (MQ=60)
                                TCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTG                                                              <  SRR4302543.1263879/94‑1 (MQ=60)
                                 CGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGA                                                             >  SRR4302543.2069859/1‑94 (MQ=60)
                                 CGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGA                                                             <  SRR4302543.7589129/94‑1 (MQ=60)
                                 CGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGA                                                             >  SRR4302543.6227100/1‑94 (MQ=60)
                                  GTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAA                                                            >  SRR4302543.7219467/1‑94 (MQ=60)
                                  GTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAA                                                            >  SRR4302543.81036/1‑94 (MQ=60)
                                   TCCACCTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAAC                                                           <  SRR4302543.5400018/94‑1 (MQ=60)
                                   TCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAAC                                                           <  SRR4302543.551215/94‑1 (MQ=60)
                                   TCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAAC                                                           <  SRR4302543.2975776/94‑1 (MQ=60)
                                   GCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAAC                                                           <  SRR4302543.968784/94‑1 (MQ=60)
                                    CCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACG                                                          >  SRR4302543.3621488/1‑94 (MQ=60)
                                    CCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACG                                                          >  SRR4302543.6181313/1‑94 (MQ=60)
                                    CCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACG                                                          <  SRR4302543.4009521/94‑1 (MQ=60)
                                     CAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGG                                                         >  SRR4302543.7759075/1‑94 (MQ=60)
                                      AACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGA                                                        >  SRR4302543.2862823/1‑94 (MQ=60)
                                      AACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGA                                                        >  SRR4302543.4216886/1‑94 (MQ=60)
                                        CTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAA                                                      >  SRR4302543.7580856/1‑94 (MQ=60)
                                         TGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAAC                                                     >  SRR4302543.6222947/1‑94 (MQ=60)
                                         TGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAAC                                                     <  SRR4302543.971496/94‑1 (MQ=60)
                                         GGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAAC                                                     <  SRR4302543.6145384/94‑1 (MQ=60)
                                          GTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACC                                                    <  SRR4302543.727184/94‑1 (MQ=60)
                                          GTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACC                                                    >  SRR4302543.2492869/1‑94 (MQ=60)
                                          GTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACC                                                    <  SRR4302543.6143059/94‑1 (MQ=60)
                                          GTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACC                                                    <  SRR4302543.6077491/94‑1 (MQ=60)
                                           TTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCG                                                   <  SRR4302543.1431180/94‑1 (MQ=60)
                                           TTGCAGAAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCG                                                   <  SRR4302543.6047575/94‑1 (MQ=60)
                                            TGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGT                                                  >  SRR4302543.886954/1‑94 (MQ=60)
                                            TGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGT                                                  >  SRR4302543.1813040/1‑94 (MQ=60)
                                            TGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGT                                                  >  SRR4302543.4586029/1‑94 (MQ=60)
                                             GCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTT                                                 >  SRR4302543.3391967/1‑94 (MQ=60)
                                              CAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTG                                                >  SRR4302543.3200532/1‑94 (MQ=60)
                                              CAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTG                                                >  SRR4302543.1551756/1‑94 (MQ=60)
                                               AGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGT                                               >  SRR4302543.2547304/1‑94 (MQ=60)
                                                GCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTC                                              >  SRR4302543.4231809/1‑94 (MQ=60)
                                                 CAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCT                                             >  SRR4302543.2521427/1‑94 (MQ=60)
                                                 CAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCT                                             <  SRR4302543.4030137/94‑1 (MQ=60)
                                                  AAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTA                                            >  SRR4302543.4337928/1‑94 (MQ=60)
                                                   AATATTAATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAA                                           <  SRR4302543.3750432/94‑1 (MQ=60)
                                                    ATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAG                                          >  SRR4302543.1036986/1‑94 (MQ=60)
                                                     TATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGT                                         >  SRR4302543.6267250/1‑94 (MQ=60)
                                                     TATTCATCCGCCGCTTCCCACGCCTGTAGCGGGGTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGT                                         <  SRR4302543.7685386/94‑1 (MQ=60)
                                                      ATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTG                                        >  SRR4302543.3050511/1‑94 (MQ=60)
                                                      ATTCATACGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTG                                        >  SRR4302543.2960288/1‑94 (MQ=60)
                                                       TTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGG                                       >  SRR4302543.3332625/1‑94 (MQ=60)
                                                       TGCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGG                                       <  SRR4302543.7524459/94‑1 (MQ=60)
                                                         CATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCT                                     <  SRR4302543.5088674/94‑1 (MQ=60)
                                                          ATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTC                                    <  SRR4302543.1567475/94‑1 (MQ=60)
                                                          ATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTC                                    >  SRR4302543.7787956/1‑94 (MQ=60)
                                                          ATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGCAGTGTCAGTGGACGGAAAGCGTTGTCTAAGcgcacc                                    >  SRR4302543.4749564/1‑88 (MQ=60)
                                                            CCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCAT                                  <  SRR4302543.53280/94‑1 (MQ=60)
                                                            CCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCAT                                  <  SRR4302543.3366631/94‑1 (MQ=60)
                                                            CCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCAT                                  <  SRR4302543.243102/94‑1 (MQ=60)
                                                            CCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCAT                                  <  SRR4302543.3454818/94‑1 (MQ=60)
                                                            CCGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCAT                                  <  SRR4302543.6677938/94‑1 (MQ=60)
                                                             CGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACGGTTGCCTAAGTGCATCATC                                 >  SRR4302543.2679653/1‑94 (MQ=60)
                                                             CGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATC                                 <  SRR4302543.4349536/94‑1 (MQ=60)
                                                             CGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATC                                 <  SRR4302543.2950661/94‑1 (MQ=60)
                                                             CGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATC                                 >  SRR4302543.7428248/1‑94 (MQ=60)
                                                             CGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATC                                 <  SRR4302543.2964299/94‑1 (MQ=60)
                                                             CGCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATC                                 <  SRR4302543.7600468/94‑1 (MQ=60)
                                                              GCCGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCG                                <  SRR4302543.6794038/94‑1 (MQ=60)
                                                                CGCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGC                              >  SRR4302543.3014531/1‑94 (MQ=60)
                                                                 GCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCC                             >  SRR4302543.1022202/1‑94 (MQ=60)
                                                                 GCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCC                             >  SRR4302543.274068/1‑94 (MQ=60)
                                                                 GCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCC                             <  SRR4302543.5982647/94‑1 (MQ=60)
                                                                 GCTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCC                             <  SRR4302543.2587756/94‑1 (MQ=60)
                                                                  CTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCC                            >  SRR4302543.2109858/1‑94 (MQ=60)
                                                                  CTTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCC                            >  SRR4302543.3960912/1‑94 (MQ=60)
                                                                  CTTCCCACGCCTGTAGCGGGTTAAAGCCATCCGTAGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCAC                            >  SRR4302543.3960913/1‑94 (MQ=60)
                                                                   TTCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCT                           <  SRR4302543.4065814/94‑1 (MQ=60)
                                                                    TCCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTC                          <  SRR4302543.3763694/94‑1 (MQ=60)
                                                                     CCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCC                         >  SRR4302543.3896190/1‑94 (MQ=60)
                                                                     CCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCC                         >  SRR4302543.293256/1‑94 (MQ=60)
                                                                     CCCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCC                         >  SRR4302543.4356400/1‑94 (MQ=60)
                                                                      CCACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCT                        >  SRR4302543.2893084/1‑94 (MQ=60)
                                                                       CACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTG                       >  SRR4302543.3397263/1‑94 (MQ=60)
                                                                       CACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGCGGCTCATCGGCCCTCCTG                       >  SRR4302543.818732/1‑94 (MQ=60)
                                                                        ACGCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGA                      >  SRR4302543.761761/1‑94 (MQ=60)
                                                                          GCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAAT                    <  SRR4302543.7907897/94‑1 (MQ=60)
                                                                          GCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAAT                    <  SRR4302543.6822369/94‑1 (MQ=60)
                                                                          GCCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAAT                    >  SRR4302543.3879326/1‑94 (MQ=60)
                                                                           CCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATG                   >  SRR4302543.2419301/1‑94 (MQ=60)
                                                                           CCTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATG                   >  SRR4302543.365734/1‑94 (MQ=60)
                                                                            CTGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGA                  >  SRR4302543.3965658/1‑94 (MQ=60)
                                                                             TGTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGAT                 <  SRR4302543.3535931/94‑1 (MQ=60)
                                                                              GTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATA                >  SRR4302543.6997264/1‑94 (MQ=60)
                                                                              GTAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATA                <  SRR4302543.5192286/94‑1 (MQ=60)
                                                                               TAGCGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAA               >  SRR4302543.4718793/1‑94 (MQ=60)
                                                                                  CGGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAAT            >  SRR4302543.7793451/1‑94 (MQ=60)
                                                                                   GGGTTAACGCCATCCGTCGCCGGCAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGCATGATAAAATT           >  SRR4302543.1063062/1‑94 (MQ=60)
                                                                                   GGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATT           <  SRR4302543.6584452/94‑1 (MQ=60)
                                                                                   GGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATT           <  SRR4302543.1184660/94‑1 (MQ=60)
                                                                                   GGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATT           >  SRR4302543.1063063/1‑94 (MQ=60)
                                                                                   GGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATT           >  SRR4302543.7605660/1‑94 (MQ=60)
                                                                                   CGGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATT           <  SRR4302543.6753756/94‑1 (MQ=60)
                                                                                    GGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTT          >  SRR4302543.7002416/1‑94 (MQ=60)
                                                                                    GGTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGCCCCTCCTGAATGATAAAATTT          <  SRR4302543.1487060/94‑1 (MQ=60)
                                                                                     GTTAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTC         <  SRR4302543.1077851/94‑1 (MQ=60)
                                                                                       TAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGA       <  SRR4302543.100555/94‑1 (MQ=60)
                                                                                       TAACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGA       <  SRR4302543.100744/94‑1 (MQ=60)
                                                                                        AACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCTTCCTGAATGATAAAATTTCGAC      <  SRR4302543.1420303/94‑1 (MQ=60)
                                                                                        AACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGAC      >  SRR4302543.7221638/1‑94 (MQ=60)
                                                                                        AACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGAC      >  SRR4302543.3202584/1‑94 (MQ=60)
                                                                                        AACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGAC      <  SRR4302543.5964928/94‑1 (MQ=60)
                                                                                        AACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGAC      <  SRR4302543.4018014/94‑1 (MQ=60)
                                                                                        AACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGAC      <  SRR4302543.7355486/94‑1 (MQ=60)
                                                                                         ACGCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACA     <  SRR4302543.5581050/94‑1 (MQ=60)
                                                                                           GCCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATT   <  SRR4302543.5073868/94‑1 (MQ=60)
                                                                                           GCCATCCGTCGCCGGAAAACATTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATT   >  SRR4302543.7737037/1‑94 (MQ=60)
                                                                                            CCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTG  >  SRR4302543.526017/1‑94 (MQ=60)
                                                                                            CCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTG  >  SRR4302543.4367252/1‑94 (MQ=60)
                                                                                            CCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTG  <  SRR4302543.2659329/94‑1 (MQ=60)
                                                                                            CCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTG  >  SRR4302543.6508356/1‑94 (MQ=60)
                                                                                            |                                                                                             
TCAGGATCAACACCGGGCCGCGGATTTCTGTGTCGTCCAACTGTTGCAGCAAATATTCATCCGCCGCTTCCCACGCCTGTAGCGGGTTAACGTCATCCGTCGCCGGAAAACGTTGTAGTGTCAGTGAACGGAAACCGTTGTCTAAGTGGCTCATCGGCCCTCCTGAATGATAAAATTTCGACATTG  >  NC_000913/3233363‑3233548

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑