Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,236,735	+C	coding (514/966 nt)	ygjT →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,236,734	1	.	C	100.0%	976.3 / NA	313	K171N (AAG→AAC)	ygjT	putative transport protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (147/166); total (147/166)

Only 100 of 355 total aligned reads displayed.

GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT  >  NC_000913/3236642‑3236822

gACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg                                                                                           <  2:5736449/93‑1 (MQ=255)

 aCTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑c                                                                                         >  2:955450/1‑93 (MQ=255)

 aCTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑c                                                                                         <  2:71257/93‑1 (MQ=255)

 aCTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑c                                                                                         >  2:233839/1‑93 (MQ=255)

 aCTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑c                                                                                         >  2:3707052/1‑93 (MQ=255)

   tGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccg                                                                                       <  2:5956739/93‑3 (MQ=255)

   tGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccg                                                                                       >  2:3013212/1‑91 (MQ=255)

     gATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccgct                                                                                     >  1:7812820/1‑89 (MQ=255)

     gATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccgct                                                                                     >  2:4301740/1‑89 (MQ=255)

       tCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTgg                                                                                    <  2:7386090/93‑1 (MQ=255)

        ccTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGt                                                                                   <  1:415281/93‑1 (MQ=255)

          tGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTTGCGACAAGCCGCTGGGgc                                                                                 >  1:2462200/1‑93 (MQ=255)

          tGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTgc                                                                                 >  1:1017396/1‑93 (MQ=255)

          tGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTgc                                                                                 <  1:5784634/93‑1 (MQ=255)

          tGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTgc                                                                                 >  2:4884411/1‑93 (MQ=255)

          tGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGATCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTgc                                                                                 >  1:5888047/1‑93 (MQ=255)

            tataTCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTgcgc                                                                               >  2:581864/1‑93 (MQ=255)

             atatCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCt                                                                              <  2:3154248/93‑1 (MQ=255)

             atatCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCt                                                                              >  1:4283193/1‑93 (MQ=255)

                  ttCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTa                                                                         >  2:6443583/1‑93 (MQ=255)

                  ttCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTa                                                                         <  2:6450341/93‑1 (MQ=255)

                   tCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTAc                                                                        <  1:1155176/93‑1 (MQ=255)

                     ggTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTAcgc                                                                      >  2:568918/1‑93 (MQ=255)

                      gTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTAcgcg                                                                     >  1:3184034/1‑93 (MQ=255)

                       tGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCgg                                                                    <  2:6375502/93‑1 (MQ=255)

                        gCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGt                                                                   <  1:3497964/93‑1 (MQ=255)

                         ccTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtc                                                                  >  1:480161/1‑92 (MQ=255)

                          cTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtca                                                                 <  2:1015231/93‑3 (MQ=255)

                           ttCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtcat                                                                >  2:1625312/1‑90 (MQ=255)

                            tCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtcatt                                                               >  1:4532701/1‑89 (MQ=255)

                              ctgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTg                                                            >  2:5756830/1‑93 (MQ=255)

                               tgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgc                                                           >  1:1804939/1‑93 (MQ=255)

                                 ctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgcgc                                                         >  1:6028112/1‑93 (MQ=255)

                                  tgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCa                                                        >  2:7906384/1‑93 (MQ=255)

                                  tgTTTACCGGCGTGAAGATGGCCCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCa                                                        <  2:2855415/93‑1 (MQ=255)

                                   gTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAt                                                       <  2:6998265/93‑1 (MQ=255)

                                   gTTTACCGGCGTGAAGATGGCGCTCCGCCATGAAGATGAATCAGGCAGTGGCGGCAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAt                                                       >  1:3038452/1‑93 (MQ=255)

                                    tttACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATg                                                      <  1:4004007/93‑1 (MQ=255)

                                    ttgaCCGGCGGGAAGATGGCGCTCGCCCATGAAGATTAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGATACGCGG‑TCATTTGCGCATg                                                      <  2:4767431/90‑1 (MQ=255)

                                      tACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAc                                                    <  2:3634413/93‑1 (MQ=255)

                                      tACCGGCGTGAAGATGGCGCTCACCCATGAAGATTAATCAGGCTTTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAc                                                    <  1:6308903/93‑1 (MQ=255)

                                        ccGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCg                                                  <  1:4424756/93‑1 (MQ=255)

                                         cGGGGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGa                                                 <  1:2104015/93‑1 (MQ=255)

                                          ggCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGac                                                >  2:1403182/1‑93 (MQ=255)

                                          ggCGGGAAGATGGCGCCCCCCAATGAAGATGAATCAGGCATTGGCAACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGac                                                <  2:7265755/93‑1 (MQ=255)

                                           gCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGaca                                               <  1:7166516/93‑1 (MQ=255)

                                            cGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGacac                                              <  2:5432141/93‑1 (MQ=255)

                                            cGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGacac                                              <  2:2156268/93‑1 (MQ=255)

                                             gTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACAcc                                             >  1:2617937/1‑93 (MQ=255)

                                              tGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCa                                            >  1:1732283/1‑93 (MQ=255)

                                               gAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAt                                           >  1:7594836/1‑93 (MQ=255)

                                               gAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAt                                           <  1:6709288/93‑1 (MQ=255)

                                                aaGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATc                                          <  2:2666410/93‑1 (MQ=255)

                                                 aGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCg                                         <  1:6875190/93‑1 (MQ=255)

                                                  gATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCGTGACCGACACCATCGa                                        >  1:6788965/1‑93 (MQ=255)

                                                  aaTGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGa                                        <  2:1498313/92‑1 (MQ=255)

                                                   aTGGCGCCAGCCCATGAAGATGAACCAGGCATTGGCAACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGAc                                       <  1:2363504/93‑1 (MQ=255)

                                                     ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa                                     <  2:4961397/93‑1 (MQ=255)

                                                     ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa                                     >  2:3990334/1‑93 (MQ=255)

                                                       cgcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACg                                   <  2:4148927/93‑1 (MQ=255)

                                                         cTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAg                                 <  1:5449971/93‑1 (MQ=255)

                                                           cGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCa                               <  2:4049895/93‑1 (MQ=255)

                                                            gCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACGACGAGCAt                              <  1:6311933/93‑1 (MQ=255)

                                                             cccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAtt                             >  1:5089927/1‑93 (MQ=255)

                                                             cccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAtt                             <  2:2922669/93‑1 (MQ=255)

                                                             cccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAtt                             <  1:6550196/93‑1 (MQ=255)

                                                              ccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAttt                            >  1:1391269/1‑93 (MQ=255)

                                                               cATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTc                           >  2:1289122/1‑93 (MQ=255)

                                                               cATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTc                           <  2:5223535/93‑1 (MQ=255)

                                                                aTGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCt                          <  1:1530023/93‑1 (MQ=255)

                                                                 tGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCtt                         >  1:7350602/1‑93 (MQ=255)

                                                                 tGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCtt                         <  1:3675343/93‑1 (MQ=255)

                                                                  gAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCttt                        <  2:7484297/93‑1 (MQ=255)

                                                                    aGATGAATCAGGCATTGTCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgt                      <  2:5101164/93‑1 (MQ=255)

                                                                    aGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgt                      <  1:2710354/93‑1 (MQ=255)

                                                                     gATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgtg                     >  1:7926244/1‑93 (MQ=255)

                                                                      aTGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGc                    <  1:7422733/93‑1 (MQ=255)

                                                                      aTGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGc                    >  2:572129/1‑93 (MQ=255)

                                                                       tGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCg                   >  1:3832569/1‑93 (MQ=255)

                                                                        gAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGt                  >  1:2954717/1‑93 (MQ=255)

                                                                           tCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAg               >  2:6860608/1‑93 (MQ=255)

                                                                            cAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGa              >  2:6286226/1‑93 (MQ=255)

                                                                             aGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGaa             >  1:6683757/1‑93 (MQ=255)

                                                                             aGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGaa             <  1:1948855/93‑1 (MQ=255)

                                                                             aGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGaa             <  1:5553001/93‑1 (MQ=255)

                                                                              ggCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAt            <  2:2276900/93‑1 (MQ=255)

                                                                               gCATGGGCCACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATg           <  1:4953038/93‑1 (MQ=255)

                                                                                 atgggCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGa         <  2:4643025/90‑1 (MQ=255)

                                                                                 aTTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGa         >  2:7860586/1‑93 (MQ=255)

                                                                                  ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        >  1:7774891/1‑93 (MQ=255)

                                                                                  ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        <  2:1862595/93‑1 (MQ=255)

                                                                                  ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        <  2:2018646/93‑1 (MQ=255)

                                                                                  ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        >  1:6964017/1‑93 (MQ=255)

                                                                                  ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        >  2:2498423/1‑93 (MQ=255)

                                                                                  ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        >  2:772461/1‑93 (MQ=255)

                                                                                  tgggCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        <  1:5252022/91‑1 (MQ=255)

                                                                                   tGGCAACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAtt       <  2:3060322/93‑1 (MQ=255)

                                                                                    ggCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTg      <  1:754092/93‑1 (MQ=255)

                                                                                        aCAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGt  <  1:3593920/93‑1 (MQ=255)

                                                                                        aCAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAACGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGt  >  2:3925786/1‑93 (MQ=255)

GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT  >  NC_000913/3236642‑3236822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC  >  NC_000913/3236643‑3236829

ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CC                                                                                               <  SRR4302543.4758887/94‑1 (MQ=60)

ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CC                                                                                               <  SRR4302543.366792/94‑1 (MQ=60)

ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CC                                                                                               <  SRR4302543.5764462/94‑1 (MQ=60)

ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CC                                                                                               <  SRR4302543.7567150/94‑1 (MQ=60)

ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTGTACCGGCGTGAAGATGGCGCTCGCCGATGGAGACGAATAAGGAATTGGCGAGAAG‑CC                                                                                               >  SRR4302543.7304930/1‑94 (MQ=60)

 CTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑Ccg                                                                                              <  SRR4302543.4848347/94‑3 (MQ=60)

   GGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCT                                                                                             >  SRR4302543.7886449/1‑94 (MQ=60)

   GGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCT                                                                                             >  SRR4302543.5334397/1‑94 (MQ=60)

    GATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTG                                                                                            >  SRR4302543.343907/1‑94 (MQ=60)

    GATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTG                                                                                            <  SRR4302543.4052842/94‑1 (MQ=60)

     ATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGG                                                                                           >  SRR4302543.6746871/1‑94 (MQ=60)

     ATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGG                                                                                           <  SRR4302543.5737389/94‑1 (MQ=60)

     ATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGG                                                                                           >  SRR4302543.6746870/1‑94 (MQ=60)

     ATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGG                                                                                           >  SRR4302543.1091260/1‑94 (MQ=60)

      TCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGCTGAATCAGGCATTGGCGACAAGCCGCTGGT                                                                                          <  SRR4302543.5042256/94‑1 (MQ=60)

      TCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGT                                                                                          <  SRR4302543.2997866/94‑1 (MQ=60)

      ACCTGTATATCTTCTGTTCCTTCTTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCAATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGT                                                                                          <  SRR4302543.3312445/94‑1 (MQ=60)

       CCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTG                                                                                         <  SRR4302543.2828768/94‑1 (MQ=60)

       CCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTG                                                                                         <  SRR4302543.419162/94‑1 (MQ=60)

       CCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTG                                                                                         <  SRR4302543.7923157/94‑1 (MQ=60)

       CCTGTATATCTCCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTG                                                                                         <  SRR4302543.1286942/94‑1 (MQ=60)

        CTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTTGCGACAAGCCGCTGGGGC                                                                                        >  SRR4302543.2484399/1‑94 (MQ=60)

        CTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGC                                                                                        >  SRR4302543.7603568/1‑94 (MQ=60)

        CTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGC                                                                                        >  SRR4302543.1026392/1‑94 (MQ=60)

        CTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGATCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGC                                                                                        >  SRR4302543.5941721/1‑94 (MQ=60)

         TGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCG                                                                                       <  SRR4302543.5837271/94‑1 (MQ=60)

           TATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCT                                                                                     >  SRR4302543.4322125/1‑94 (MQ=60)

           TATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCT                                                                                     <  SRR4302543.1660430/94‑1 (MQ=60)

            ATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTG                                                                                    <  SRR4302543.5523962/94‑1 (MQ=60)

              ATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGC                                                                                  >  SRR4302543.4385148/1‑94 (MQ=60)

              ATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGC                                                                                  >  SRR4302543.3192973/1‑94 (MQ=60)

              ATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGC                                                                                  >  SRR4302543.5092413/1‑94 (MQ=60)

                CTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTA                                                                                >  SRR4302543.5477376/1‑94 (MQ=60)

                  TCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACG                                                                              >  SRR4302543.1756227/1‑94 (MQ=60)

                  TCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACG                                                                              <  SRR4302543.1165689/94‑1 (MQ=60)

                  TCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACG                                                                              <  SRR4302543.5878685/94‑1 (MQ=60)

                   CGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGC                                                                             >  SRR4302543.3769573/1‑94 (MQ=60)

                    GGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCG                                                                            >  SRR4302543.3212746/1‑94 (MQ=60)

                     GTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG                                                                           >  SRR4302543.2698660/1‑94 (MQ=60)

                      TGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGT                                                                          >  SRR4302543.1264017/1‑94 (MQ=60)

                      TGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGT                                                                          >  SRR4302543.7467987/1‑94 (MQ=60)

                       GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTC                                                                         <  SRR4302543.3529253/94‑1 (MQ=60)

                       GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTC                                                                         >  SRR4302543.6872602/1‑94 (MQ=60)

                       GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTC                                                                         >  SRR4302543.484601/1‑94 (MQ=60)

                         CTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCAT                                                                      <  SRR4302543.1886255/94‑1 (MQ=60)

                         CTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCAT                                                                      >  SRR4302543.3045027/1‑94 (MQ=60)

                          TTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATT                                                                     >  SRR4302543.4573961/1‑94 (MQ=60)

                            CCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTG                                                                   <  SRR4302543.1483818/94‑1 (MQ=60)

                             CTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTcatttgg                                                                   >  SRR4302543.6994761/1‑87 (MQ=60)

                             CTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGC                                                                  >  SRR4302543.6954588/1‑94 (MQ=60)

                             CTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGC                                                                  >  SRR4302543.1821094/1‑94 (MQ=60)

                               GCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGC                                                                >  SRR4302543.6084363/1‑94 (MQ=60)

                               GCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGC                                                                >  SRR4302543.5222861/1‑94 (MQ=60)

                                CTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCA                                                               >  SRR4302543.4523929/1‑94 (MQ=60)

                                CTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCA                                                               >  SRR4302543.5879649/1‑94 (MQ=60)

                                CTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCA                                                               >  SRR4302543.3894027/1‑94 (MQ=60)

                                 TGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAT                                                              <  SRR4302543.1398814/94‑1 (MQ=60)

                                 TGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAT                                                              >  SRR4302543.3611666/1‑94 (MQ=60)

                                 TGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAT                                                              >  SRR4302543.814979/1‑94 (MQ=60)

                                 TGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAT                                                              <  SRR4302543.7657441/94‑1 (MQ=60)

                                 TGTTTACCGGCGTGAAGATGGCGCTCCGCCATGAAGATGAATCAGGCAGTGGCGGCAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAT                                                              >  SRR4302543.3065865/1‑94 (MQ=60)

                                  GTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATG                                                             <  SRR4302543.3574460/94‑1 (MQ=60)

                                   TTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGA                                                            <  SRR4302543.4039732/94‑1 (MQ=60)

                                    TTCCCGGCGTGAAGATGGCGCCCGCCCATTAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAC                                                           <  SRR4302543.2403005/94‑1 (MQ=60)

                                    TTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAC                                                           <  SRR4302543.5594738/94‑1 (MQ=60)

                                     TACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACC                                                          <  SRR4302543.7733915/94‑1 (MQ=60)

                                     TACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACC                                                          <  SRR4302543.1771506/94‑1 (MQ=60)

                                     TACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACC                                                          <  SRR4302543.6368234/94‑1 (MQ=60)

                                     TACCGGCGTGAAGATGGCGCTCACCCATGAAGATTAATCAGGCTTTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACC                                                          <  SRR4302543.6368233/94‑1 (MQ=60)

                                       CCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGA                                                        <  SRR4302543.4464851/94‑1 (MQ=60)

                                       CCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGA                                                        >  SRR4302543.7454860/1‑94 (MQ=60)

                                       CCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGA                                                        <  SRR4302543.7069533/94‑1 (MQ=60)

                                        CGGGGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGAC                                                       <  SRR4302543.2122841/94‑1 (MQ=60)

                                         GGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACC                                                      >  SRR4302543.1832541/1‑94 (MQ=60)

                                         GGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACA                                                      >  SRR4302543.563744/1‑94 (MQ=60)

                                          GCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACAC                                                     <  SRR4302543.7236124/94‑1 (MQ=60)

                                           GGTGAAGATGGCGCTCGCCCATGAAGAGGAATAAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACC                                                    <  SRR4302543.6730032/94‑1 (MQ=60)

                                           CGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATTACCGACACC                                                    >  SRR4302543.6800898/1‑94 (MQ=60)

                                           CGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACC                                                    >  SRR4302543.2641671/1‑94 (MQ=60)

                                            GTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCA                                                   >  SRR4302543.1747725/1‑94 (MQ=60)

                                             TGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAT                                                  >  SRR4302543.7666992/1‑94 (MQ=60)

                                             TGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAT                                                  >  SRR4302543.7886079/1‑94 (MQ=60)

                                             TGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAT                                                  <  SRR4302543.789403/94‑1 (MQ=60)

                                              GAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATC                                                 <  SRR4302543.6772649/94‑1 (MQ=60)

                                              GAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATC                                                 <  SRR4302543.6087080/94‑1 (MQ=60)

                                              GAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATC                                                 >  SRR4302543.3631233/1‑94 (MQ=60)

                                              GAAAATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATC                                                 <  SRR4302543.2339499/94‑1 (MQ=60)

                                               AAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCG                                                <  SRR4302543.4312206/94‑1 (MQ=60)

                                               AAGATGGCGCTCGCCCATGAAGACGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCG                                                <  SRR4302543.4437738/94‑1 (MQ=60)

                                                AGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCGTGACCGACACCATCGA                                               >  SRR4302543.6853079/1‑94 (MQ=60)

                                                AGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGA                                               <  SRR4302543.6939917/94‑1 (MQ=60)

                                                  ATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACA                                             >  SRR4302543.256623/1‑94 (MQ=60)

                                                  ATGGCGCCAGCCCATGAAGATGAACCAGGCATTGGCAACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACA                                             <  SRR4302543.2384937/94‑1 (MQ=60)

                                                   TGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAA                                            <  SRR4302543.4004440/94‑1 (MQ=60)

                                                    GGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAAC                                           <  SRR4302543.1060408/94‑1 (MQ=60)

                                                     GCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACG                                          <  SRR4302543.6999398/94‑1 (MQ=60)

                                                     GCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACG                                          >  SRR4302543.3298914/1‑94 (MQ=60)

                                                     GCGCGCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACG                                          <  SRR4302543.5949168/94‑1 (MQ=60)

                                                       GCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAG                                        <  SRR4302543.6239706/94‑1 (MQ=60)

                                                       GCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAG                                        >  SRR4302543.6860442/1‑94 (MQ=60)

                                                       GCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAG                                        <  SRR4302543.7922028/94‑1 (MQ=60)

                                                        cccgcccatgaagtaaaacaAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGC                                       <  SRR4302543.691872/74‑1 (MQ=60)

                                                        CTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGC                                       <  SRR4302543.5499403/94‑1 (MQ=60)

                                                         TCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCA                                      >  SRR4302543.1727194/1‑94 (MQ=60)

                                                          CGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAT                                     <  SRR4302543.6020130/94‑1 (MQ=60)

                                                           GCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACGACGAGCATT                                    <  SRR4302543.6371295/94‑1 (MQ=60)

                                                           GCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATT                                    >  SRR4302543.5136051/1‑94 (MQ=60)

                                                           GCCCATGAAGAGGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATT                                    <  SRR4302543.6371294/94‑1 (MQ=60)

                                                            CCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTT                                   <  SRR4302543.6611849/94‑1 (MQ=60)

                                                            CCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTT                                   >  SRR4302543.1403796/1‑94 (MQ=60)

                                                            CCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTT                                   >  SRR4302543.4674744/1‑94 (MQ=60)

                                                             caacgaagcggaatggGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCTG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC                                  <  SRR4302543.4974048/78‑1 (MQ=60)

                                                             CCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC                                  >  SRR4302543.4123769/1‑94 (MQ=60)

                                                             CCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC                                  >  SRR4302543.7773133/1‑94 (MQ=60)

                                                              CATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCT                                 <  SRR4302543.4504070/94‑1 (MQ=60)

                                                              CATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCT                                 >  SRR4302543.5100853/1‑94 (MQ=60)

                                                              CATGAAGATGAACCAGGGCTGGGCGACAAGCCGCTGGTGCTCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCT                                 <  SRR4302543.3186481/94‑1 (MQ=60)

                                                               ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT                                >  SRR4302543.7775397/1‑94 (MQ=60)

                                                               ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT                                >  SRR4302543.7421308/1‑94 (MQ=60)

                                                               ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT                                <  SRR4302543.7137009/94‑1 (MQ=60)

                                                               ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT                                >  SRR4302543.2037855/1‑94 (MQ=60)

                                                               ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT                                <  SRR4302543.1543741/94‑1 (MQ=60)

                                                                TGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTT                               <  SRR4302543.3707618/94‑1 (MQ=60)

                                                                TGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTT                               <  SRR4302543.6136432/94‑1 (MQ=60)

                                                                TGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTT                               <  SRR4302543.4268200/94‑1 (MQ=60)

                                                                  AAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGT                             <  SRR4302543.1876977/94‑1 (MQ=60)

                                                                  AAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGT                             <  SRR4302543.4161915/94‑1 (MQ=60)

                                                                   AGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTG                            <  SRR4302543.6569016/94‑1 (MQ=60)

                                                                   AGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTG                            >  SRR4302543.8000676/1‑94 (MQ=60)

                                                                   AGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTG                            >  SRR4302543.888548/1‑94 (MQ=60)

                                                                   AGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTG                            >  SRR4302543.2565052/1‑94 (MQ=60)

                                                                   AGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTG                            <  SRR4302543.2734965/94‑1 (MQ=60)

                                                                    GATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGC                           >  SRR4302543.6770268/1‑94 (MQ=60)

                                                                     ATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCG                          >  SRR4302543.5631462/1‑94 (MQ=60)

                                                                     ATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCG                          <  SRR4302543.7493927/94‑1 (MQ=60)

                                                                     ATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCG                          <  SRR4302543.3241527/94‑1 (MQ=60)

                                                                     ATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCG                          >  SRR4302543.3866378/1‑94 (MQ=60)

                                                                      TGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGT                         >  SRR4302543.2981545/1‑94 (MQ=60)

                                                                      TGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGT                         >  SRR4302543.5881094/1‑94 (MQ=60)

                                                                      TGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGT                         >  SRR4302543.4390485/1‑94 (MQ=60)

                                                                        AATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAA                       >  SRR4302543.2293276/1‑94 (MQ=60)

                                                                        AATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAA                       <  SRR4302543.5399467/94‑1 (MQ=60)

                                                                        AATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAA                       >  SRR4302543.3687417/1‑94 (MQ=60)

                                                                         ATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAG                      >  SRR4302543.2985178/1‑94 (MQ=60)

                                                                         ATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAG                      <  SRR4302543.2708395/94‑1 (MQ=60)

                                                                         ATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAG                      <  SRR4302543.7395276/94‑1 (MQ=60)

                                                                         ATCAGGCATTGGCGAAAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAG                      <  SRR4302543.2410945/94‑1 (MQ=60)

                                                                           CAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAA                    >  SRR4302543.4812253/1‑94 (MQ=60)

                                                                           CAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAA                    >  SRR4302543.5286153/1‑94 (MQ=60)

                                                                           CAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAA                    >  SRR4302543.6746855/1‑94 (MQ=60)

                                                                            AGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAT                   <  SRR4302543.49244/94‑1 (MQ=60)

                                                                            AGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAT                   <  SRR4302543.5603511/94‑1 (MQ=60)

                                                                            AGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAT                   <  SRR4302543.1734182/94‑1 (MQ=60)

                                                                            AGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAT                   <  SRR4302543.1966339/94‑1 (MQ=60)

                                                                             GGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATG                  >  SRR4302543.3931042/1‑94 (MQ=60)

                                                                             GGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATG                  <  SRR4302543.6667677/94‑1 (MQ=60)

                                                                             GCCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATG                  <  SRR4302543.7875576/94‑1 (MQ=60)

                                                                              GCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGG                 <  SRR4302543.2493288/94‑1 (MQ=60)

                                                                              GCATGGGCCACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGG                 <  SRR4302543.4998144/94‑1 (MQ=60)

                                                                               CATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGA                >  SRR4302543.7622700/1‑94 (MQ=60)

                                                                                atgggggacaagcCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAT               <  SRR4302543.885946/81‑1 (MQ=60)

                                                                                ATTTGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAT               <  SRR4302543.1538087/94‑1 (MQ=60)

                                                                                ATTGGCGCCAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGAATGACCGACATCATCGCCACCGAGCATTTCTTTGTGCGTAAGAATGGAT               >  SRR4302543.2837186/1‑94 (MQ=60)

                                                                                ATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAT               >  SRR4302543.2071451/1‑94 (MQ=60)

                                                                                ATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAT               >  SRR4302543.7029553/1‑94 (MQ=60)

                                                                                ATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAT               >  SRR4302543.7848220/1‑94 (MQ=60)

                                                                                ATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAT               >  SRR4302543.6777101/1‑94 (MQ=60)

                                                                                ATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAT               <  SRR4302543.6454317/94‑1 (MQ=60)

                                                                                ATTGGCGACAAGCCGCTGGCGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAT               >  SRR4302543.6777100/1‑94 (MQ=60)

                                                                                ATTGGCGAAAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAT               <  SRR4302543.6454316/94‑1 (MQ=60)

                                                                                 TTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATT              >  SRR4302543.2194118/1‑94 (MQ=60)

                                                                                 TTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATT              <  SRR4302543.3735972/94‑1 (MQ=60)

                                                                                 TGGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATT              <  SRR4302543.5299377/94‑1 (MQ=60)

                                                                                 TGGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATT              <  SRR4302543.2932352/94‑1 (MQ=60)

                                                                                  TGGGGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTG             <  SRR4302543.2702280/94‑1 (MQ=60)

                                                                                  TGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTG             >  SRR4302543.7572956/1‑94 (MQ=60)

                                                                                   GGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGC            <  SRR4302543.760765/94‑1 (MQ=60)

                                                                                      GACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT         <  SRR4302543.7400535/94‑1 (MQ=60)

                                                                                       ACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTA        >  SRR4302543.2439749/1‑94 (MQ=60)

                                                                                       ACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTA        <  SRR4302543.3625642/94‑1 (MQ=60)

                                                                                       ACAAGCCGCTGGGGCGCTGGATACGCGG‑TCATTTGCCCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGGACGAATGGATTGCTGTA        >  SRR4302543.3009260/1‑94 (MQ=60)

                                                                                        CAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTAC       >  SRR4302543.7429524/1‑94 (MQ=60)

                                                                                        CAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTAC       <  SRR4302543.3415193/94‑1 (MQ=60)

                                                                                         AAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACG      <  SRR4302543.6665964/94‑1 (MQ=60)

                                                                                          agcCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGTATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGC     >  SRR4302543.2424900/4‑94 (MQ=60)

                                                                                          agcCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGC     <  SRR4302543.7152343/91‑1 (MQ=60)

                                                                                           gcCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCC    <  SRR4302543.5214474/92‑1 (MQ=60)

                                                                                           C‑CGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCA   >  SRR4302543.5075960/1‑94 (MQ=60)

                                                                                             CGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC  >  SRR4302543.1190702/1‑94 (MQ=60)

                                                                                             CGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC  >  SRR4302543.861372/1‑94 (MQ=60)

                                                                                             CGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC  >  SRR4302543.2565661/1‑94 (MQ=60)

ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC  >  NC_000913/3236643‑3236829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`