Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,262,944	G→A	R242R (CGC→CGT)	tdcB ←	threonine dehydratase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,262,944	0	G	A	99.1%	1184.7 / ‑3.6	339	R242R (CGC→CGT)	tdcB	threonine dehydratase
Reads supporting (aligned to +/- strand): ref base G (3/0); new base A (176/160); total (179/160)
Fisher's exact test for biased strand distribution p-value = 2.50e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.06e-01

Only 100 of 357 total aligned reads displayed.

GGCAATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGGCGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAACGTT  >  NC_000913/3262854‑3263036

 gCAATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCcggacgg                                                                                           <  2:7109487/93‑1 (MQ=255)

   aaTCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGga                                                                                         <  2:6058767/93‑1 (MQ=255)

    aTCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGgag                                                                                        >  2:4010880/1‑93 (MQ=255)

        tACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACAt                                                                                    >  1:5720068/1‑93 (MQ=255)

        tACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACAt                                                                                    >  1:62410/1‑93 (MQ=255)

         aCTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATc                                                                                   <  1:2965387/93‑1 (MQ=255)

             tttCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACaa                                                                               <  2:3116005/93‑1 (MQ=255)

             tttCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACaa                                                                               >  1:5243353/1‑93 (MQ=255)

             tttCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACaa                                                                               >  1:5363121/1‑93 (MQ=255)

             tttCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACaa                                                                               <  1:3149529/93‑1 (MQ=255)

               tCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTCAATTACCCGGACGGGAGACATCACAAcc                                                                             >  1:6675856/1‑93 (MQ=255)

               tCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAAcc                                                                             <  2:421655/93‑1 (MQ=255)

                cTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCa                                                                            >  1:7063851/1‑93 (MQ=255)

                 tGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCac                                                                           >  1:6540136/1‑92 (MQ=255)

                 tGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCAt                                                                           >  2:5774524/1‑93 (MQ=255)

                  gATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATc                                                                          >  1:4335378/1‑93 (MQ=255)

                  gATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATc                                                                          >  1:6178853/1‑93 (MQ=255)

                  gATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATc                                                                          >  2:3899725/1‑93 (MQ=255)

                  gATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATc                                                                          >  2:5928138/1‑93 (MQ=255)

                   aTTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATcc                                                                         <  2:7244514/93‑1 (MQ=255)

                   aTTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATcc                                                                         >  1:900035/1‑93 (MQ=255)

                    tttCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCg                                                                        >  2:622720/1‑93 (MQ=255)

                     ttCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTCCCCGGACGGGAGACATCACAACCATCCGc                                                                       <  2:3407174/93‑1 (MQ=255)

                     ttCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGc                                                                       >  2:295060/1‑93 (MQ=255)

                       cGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCa                                                                     <  1:7217075/93‑1 (MQ=255)

                        gTCTTCTCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAg                                                                    <  2:1682841/93‑1 (MQ=255)

                        gTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAg                                                                    <  1:4607416/93‑1 (MQ=255)

                        gTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAg                                                                    <  1:2174299/93‑1 (MQ=255)

                        gTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAg                                                                    <  2:6877159/93‑1 (MQ=255)

                        gTCTGCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAg                                                                    <  1:7362361/93‑1 (MQ=255)

                         tCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAg                                                                    <  1:7541696/92‑1 (MQ=255)

                          cTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAggg                                                                  <  2:6394134/93‑1 (MQ=255)

                          cTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAggg                                                                  <  1:1583541/93‑1 (MQ=255)

                          cTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAggg                                                                  >  1:1155258/1‑93 (MQ=255)

                              gCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGcc                                                              <  1:2435061/93‑1 (MQ=255)

                               cTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCg                                                             <  2:7695892/93‑1 (MQ=255)

                                tGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCgg                                                            >  2:1445835/1‑93 (MQ=255)

                                tGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCgg                                                            >  1:6888376/1‑93 (MQ=255)

                                tGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCgg                                                            <  1:1771208/93‑1 (MQ=255)

                                  aCCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTa                                                          <  2:5256016/93‑1 (MQ=255)

                                   ccAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGCGACATCACAACCATCCGCCAGGGTGCCGGTAg                                                         >  1:3740073/1‑93 (MQ=255)

                                   ccAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAg                                                         <  1:4888614/93‑1 (MQ=255)

                                   ccAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAg                                                         <  1:2563699/93‑1 (MQ=255)

                                    cAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGt                                                        >  2:6514692/1‑93 (MQ=255)

                                     aGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGtt                                                       >  2:6594865/1‑93 (MQ=255)

                                     aGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGtt                                                       <  1:2271623/93‑1 (MQ=255)

                                      gCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTc                                                      <  2:6728521/93‑1 (MQ=255)

                                      gCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTc                                                      >  2:2512443/1‑93 (MQ=255)

                                       cACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCg                                                     <  2:5173731/93‑1 (MQ=255)

                                        aCGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCgg                                                    <  2:1356902/93‑1 (MQ=255)

                                        aCGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCgg                                                    >  2:4760261/1‑93 (MQ=255)

                                         cGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGt                                                   <  2:7516715/93‑1 (MQ=255)

                                            tGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCg                                                >  2:2706743/1‑93 (MQ=255)

                                              tCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTg                                              <  2:2661831/93‑1 (MQ=255)

                                              tCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTg                                              >  1:1233555/1‑93 (MQ=255)

                                               cATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTgg                                             <  1:3917467/93‑1 (MQ=255)

                                                aTCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGt                                            <  2:1918383/93‑1 (MQ=255)

                                                 tCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGtt                                           >  2:5293984/1‑93 (MQ=255)

                                                 tCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGtt                                           >  1:152331/1‑93 (MQ=255)

                                                  cGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTa                                          >  1:5605914/1‑93 (MQ=255)

                                                  cGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTa                                          <  2:7282303/93‑1 (MQ=255)

                                                   gACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGAAGGGAGACATCAAAACCATCCGCCAGGGTGCCGTAAGTTCGGTGCGTGGTTAt                                         >  2:6768144/1‑93 (MQ=255)

                                                       aaTTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTtct                                     <  1:2705588/93‑1 (MQ=255)

                                                        aTTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTtctc                                    <  2:3815411/93‑1 (MQ=255)

                                                         ttCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTcc                                   <  2:234160/93‑1 (MQ=255)

                                                           cACGAACTATTTCGTAAGTTAAATTACCCGGACGGGATACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCgg                                 <  2:4713469/93‑1 (MQ=255)

                                                           cACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCgg                                 <  2:6311535/93‑1 (MQ=255)

                                                           cACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCgg                                 <  1:2123345/93‑1 (MQ=255)

                                                            acgaacgaTTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCTGGTAGTTCGGTGCGTGGTTATTTCTCCGGa                                <  2:1021711/93‑1 (MQ=255)

                                                            acgaacgaTTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGa                                <  1:1055040/93‑1 (MQ=255)

                                                                 cgaTTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGa                           >  2:5687930/1‑93 (MQ=255)

                                                                   aTTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGaaa                         >  1:260242/1‑93 (MQ=255)

                                                                   aTTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGaaa                         <  1:4207411/93‑1 (MQ=255)

                                                                     ttCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAaaga                       <  2:2124268/93‑1 (MQ=255)

                                                                      tCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAaagaa                      <  1:362596/93‑1 (MQ=255)

                                                                      tCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAaagaa                      <  2:3687762/93‑1 (MQ=255)

                                                                       cGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAaagaag                     >  2:791250/1‑93 (MQ=255)

                                                                        gTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAgc                    >  2:3245193/1‑93 (MQ=255)

                                                                        gTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAgc                    <  1:1307943/93‑1 (MQ=255)

                                                                        gTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGCGCGTGGTTATTTCTCCGGAGTGGAAAGAAgc                    <  1:6639183/93‑1 (MQ=255)

                                                                         tAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAaagaagac                   >  2:5506948/1‑91 (MQ=255)

                                                                         tAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAgcc                   >  1:5918585/1‑93 (MQ=255)

                                                                          aaGTTAAATTACCCGGACGGGAGACATCACACCCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAgccg                  <  2:7138282/93‑1 (MQ=255)

                                                                           aGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAgccgc                 >  2:2615376/1‑93 (MQ=255)

                                                                             ttAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCa               <  1:643410/93‑1 (MQ=255)

                                                                             ttAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCa               <  1:4526437/93‑1 (MQ=255)

                                                                             ttAAATTACCCGGACGGGAGACATCACAACCATCCGCCACGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCa               >  1:3303092/1‑93 (MQ=255)

                                                                              tAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCAt              >  1:1868640/1‑93 (MQ=255)

                                                                              tAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCAt              <  1:3405653/93‑1 (MQ=255)

                                                                                aaTTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGc            <  2:446765/93‑1 (MQ=255)

                                                                                 aTTACCCGGACGGGAGACATCACAACCATCCGCCAGGGGGCCGGGAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATgac           >  2:2772018/1‑91 (MQ=255)

                                                                                   tACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGt         >  2:3632662/1‑93 (MQ=255)

                                                                                   tACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGt         <  1:7680084/93‑1 (MQ=255)

                                                                                    aCCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGAGGAAAGAAGCCGCCATGCCGTg        >  1:4766516/1‑93 (MQ=255)

                                                                                      ccGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGac      >  1:5807069/1‑92 (MQ=255)

                                                                                      ccGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGaa      <  1:7423607/93‑1 (MQ=255)

                                                                                       cggacgggAGACATCACACCCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAAc     <  2:1591301/93‑1 (MQ=255)

                                                                                       cggacgggAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAAc     <  1:825166/93‑1 (MQ=255)

                                                                                          gcgggAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAACGtt  <  2:5409249/93‑1 (MQ=255)

                                                                                          gcgggAGACATCACAACCAGCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAACGtt  <  1:3202479/93‑1 (MQ=255)

GGCAATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGGCGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAACGTT  >  NC_000913/3262854‑3263036

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TAAGGCAATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGGCGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAACGTTT  >  NC_000913/3262851‑3263037

TAAGGCAATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGCATAATTCACGAACGATTTCGTAAGTTAAATTACCCGGA                                                                                               >  SRR4302543.1435735/1‑94 (MQ=60)

TAAGGCAATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGA                                                                                               >  SRR4302543.4067397/1‑94 (MQ=60)

TAAGGCAATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGA                                                                                               >  SRR4302543.817407/1‑94 (MQ=60)

 AAGGCAATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGAC                                                                                              <  SRR4302543.132176/94‑1 (MQ=60)

 AAGGCAATCATACTGTTTCTGATTTCGTCTTCGCGGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGAC                                                                                              <  SRR4302543.704876/94‑1 (MQ=60)

  AGGCAATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACG                                                                                             <  SRR4302543.3227037/94‑1 (MQ=60)

  AGGCAATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACG                                                                                             <  SRR4302543.3272423/94‑1 (MQ=60)

  AGGCAATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACG                                                                                             <  SRR4302543.3734778/94‑1 (MQ=60)

  AGGCAATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACG                                                                                             <  SRR4302543.4231419/94‑1 (MQ=60)

   GGCAATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGG                                                                                            <  SRR4302543.4618454/94‑1 (MQ=60)

    GCAATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGG                                                                                           >  SRR4302543.1325931/1‑94 (MQ=60)

     CAATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTGTAATTACCCGGACGGGA                                                                                          >  SRR4302543.7109992/1‑94 (MQ=60)

      AATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAG                                                                                         >  SRR4302543.2937010/1‑94 (MQ=60)

      AATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAG                                                                                         >  SRR4302543.5165002/1‑94 (MQ=60)

       ATTATTCTGTGTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGA                                                                                        <  SRR4302543.4229705/94‑1 (MQ=60)

       ATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGA                                                                                        >  SRR4302543.2566945/1‑94 (MQ=60)

        TCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGAC                                                                                       >  SRR4302543.4824746/1‑94 (MQ=60)

        TCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGAC                                                                                       <  SRR4302543.576710/94‑1 (MQ=60)

         CATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACA                                                                                      >  SRR4302543.6156061/1‑94 (MQ=60)

         CATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACA                                                                                      >  SRR4302543.5367952/1‑94 (MQ=60)

          ATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACAT                                                                                     >  SRR4302543.466349/1‑94 (MQ=60)

          ATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACAT                                                                                     >  SRR4302543.62957/1‑94 (MQ=60)

          ATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACAT                                                                                     <  SRR4302543.4633603/94‑1 (MQ=60)

          ATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACAT                                                                                     >  SRR4302543.5772264/1‑94 (MQ=60)

          ATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACAT                                                                                     >  SRR4302543.673689/1‑94 (MQ=60)

           TACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATC                                                                                    >  SRR4302543.3838676/1‑94 (MQ=60)

            ACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCA                                                                                   <  SRR4302543.2992320/94‑1 (MQ=60)

            ACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCA                                                                                   >  SRR4302543.7135687/1‑94 (MQ=60)

            ACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCA                                                                                   >  SRR4302543.868290/1‑94 (MQ=60)

             CTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCAC                                                                                  >  SRR4302543.2658784/1‑94 (MQ=60)

              TGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACA                                                                                 >  SRR4302543.222882/1‑94 (MQ=60)

              TGTTTCTGATGTCGTCTTCGCTGCCCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACA                                                                                 <  SRR4302543.1546767/94‑1 (MQ=60)

               TTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAA                                                                                <  SRR4302543.585731/94‑1 (MQ=60)

               GTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTCAATTACCCGGACGGGAGACATCACAA                                                                                >  SRR4302543.5411662/1‑94 (MQ=60)

               GTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAA                                                                                >  SRR4302543.5290614/1‑94 (MQ=60)

               GTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAA                                                                                >  SRR4302543.5290613/1‑94 (MQ=60)

               GTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAA                                                                                >  SRR4302543.5411661/1‑94 (MQ=60)

                TTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAAC                                                                               <  SRR4302543.3177858/94‑1 (MQ=60)

                TTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAAC                                                                               >  SRR4302543.3190369/1‑94 (MQ=60)

                 TTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTCAATTACCCGGACGGGAGACATCACAACC                                                                              >  SRR4302543.6738884/1‑94 (MQ=60)

                 TTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACC                                                                              >  SRR4302543.5588262/1‑94 (MQ=60)

                  TCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCA                                                                             <  SRR4302543.2419984/94‑1 (MQ=60)

                  TCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCA                                                                             >  SRR4302543.7132430/1‑94 (MQ=60)

                  TCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCA                                                                             >  SRR4302543.7132429/1‑94 (MQ=60)

                   CTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCAC                                                                            >  SRR4302543.6601698/1‑94 (MQ=60)

                    TGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATC                                                                           >  SRR4302543.6237264/1‑94 (MQ=60)

                    TGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATC                                                                           >  SRR4302543.4374701/1‑94 (MQ=60)

                    TGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATC                                                                           <  SRR4302543.2625943/94‑1 (MQ=60)

                     GATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCTTAAGTTAAATTACCCGGACGCGAGACATCACAACCATCC                                                                          >  SRR4302543.1305614/1‑94 (MQ=60)

                     GATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCC                                                                          <  SRR4302543.6283568/94‑1 (MQ=60)

                     GATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCC                                                                          <  SRR4302543.3090618/94‑1 (MQ=60)

                     GATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCC                                                                          <  SRR4302543.1575728/94‑1 (MQ=60)

                     GATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCC                                                                          >  SRR4302543.907980/1‑94 (MQ=60)

                     GATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCC                                                                          >  SRR4302543.5290628/1‑94 (MQ=60)

                      ATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCG                                                                         <  SRR4302543.326417/94‑1 (MQ=60)

                      ATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCG                                                                         <  SRR4302543.5664952/94‑1 (MQ=60)

                      ATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCC                                                                         >  SRR4302543.1908225/1‑94 (MQ=60)

                       TTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGC                                                                        >  SRR4302543.7539916/1‑94 (MQ=60)

                        TTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCC                                                                       <  SRR4302543.3262433/94‑1 (MQ=60)

                         TCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGGCGGGAGACATCACAACCATCCaccg                                                                      >  SRR4302543.6747403/1‑90 (MQ=60)

                         TCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCA                                                                      <  SRR4302543.1148330/94‑1 (MQ=60)

                          CGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAG                                                                     >  SRR4302543.5950362/1‑94 (MQ=60)

                          CGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAG                                                                     <  SRR4302543.7287031/94‑1 (MQ=60)

                          CGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAG                                                                     >  SRR4302543.7340436/1‑94 (MQ=60)

                          CGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAG                                                                     <  SRR4302543.6817151/94‑1 (MQ=60)

                          CGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAG                                                                     >  SRR4302543.6278142/1‑94 (MQ=60)

                          CGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAG                                                                     >  SRR4302543.1885238/1‑94 (MQ=60)

                           GTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCCTCCCCCAGG                                                                    >  SRR4302543.5851616/1‑94 (MQ=60)

                           GTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGG                                                                    <  SRR4302543.4188132/94‑1 (MQ=60)

                           GTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGG                                                                    >  SRR4302543.6404772/1‑94 (MQ=60)

                           GTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGG                                                                    <  SRR4302543.7613570/94‑1 (MQ=60)

                           GTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGG                                                                    <  SRR4302543.4400929/94‑1 (MQ=60)

                           GTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGG                                                                    <  SRR4302543.4649265/94‑1 (MQ=60)

                           GTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGG                                                                    <  SRR4302543.2193778/94‑1 (MQ=60)

                           GTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGG                                                                    >  SRR4302543.5761144/1‑94 (MQ=60)

                           GTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGG                                                                    >  SRR4302543.1287823/1‑94 (MQ=60)

                           GTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGG                                                                    >  SRR4302543.2388266/1‑94 (MQ=60)

                           GTCTGCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGG                                                                    <  SRR4302543.7433156/94‑1 (MQ=60)

                            TCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGG                                                                   >  SRR4302543.1165771/1‑94 (MQ=60)

                            TCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGG                                                                   <  SRR4302543.1199539/94‑1 (MQ=60)

                             CTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCCCAACCATCCGCCAGGGT                                                                  >  SRR4302543.1833829/1‑94 (MQ=60)

                             CTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGT                                                                  >  SRR4302543.2183832/1‑94 (MQ=60)

                             CTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGT                                                                  <  SRR4302543.3655369/94‑1 (MQ=60)

                             CTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGT                                                                  <  SRR4302543.7518523/94‑1 (MQ=60)

                             CTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGT                                                                  <  SRR4302543.6378269/94‑1 (MQ=60)

                             CTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGT                                                                  <  SRR4302543.2355169/94‑1 (MQ=60)

                             CTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGT                                                                  <  SRR4302543.1597676/94‑1 (MQ=60)

                              TTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTG                                                                 <  SRR4302543.1182787/94‑1 (MQ=60)

                                 GCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCG                                                              <  SRR4302543.7714068/94‑1 (MQ=60)

                                 GCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCG                                                              <  SRR4302543.2457031/94‑1 (MQ=60)

                                  CTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGG                                                             >  SRR4302543.6953160/1‑94 (MQ=60)

                                  CTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGG                                                             >  SRR4302543.308825/1‑94 (MQ=60)

                                  CTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGACAGGGTGCGGG                                                             >  SRR4302543.4884747/1‑94 (MQ=60)

                                   TGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGT                                                            <  SRR4302543.2288477/94‑1 (MQ=60)

                                   TGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGT                                                            <  SRR4302543.1787042/94‑1 (MQ=60)

                                   TGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGT                                                            >  SRR4302543.982459/1‑94 (MQ=60)

                                     ACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGCGACATCACAACCATCCGCCAGGGTGCCGGTAG                                                          >  SRR4302543.3772976/1‑94 (MQ=60)

                                     ACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAG                                                          >  SRR4302543.3772977/1‑94 (MQ=60)

                                      CCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGT                                                         <  SRR4302543.6663371/94‑1 (MQ=60)

                                      CCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGT                                                         <  SRR4302543.2587121/94‑1 (MQ=60)

                                      CCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGT                                                         <  SRR4302543.4933171/94‑1 (MQ=60)

                                        AGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTC                                                       <  SRR4302543.2292383/94‑1 (MQ=60)

                                        AGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTC                                                       <  SRR4302543.1240397/94‑1 (MQ=60)

                                          CACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGG                                                     >  SRR4302543.2938726/1‑94 (MQ=60)

                                          CACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCACCAGGGTGCCGGTAGTTCGG                                                     <  SRR4302543.7736598/94‑1 (MQ=60)

                                           ACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGT                                                    >  SRR4302543.4959815/1‑94 (MQ=60)

                                           ACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGG                                                    >  SRR4302543.3694773/1‑94 (MQ=60)

                                            CGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTG                                                   >  SRR4302543.6967323/1‑94 (MQ=60)

                                             GATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCNNNNGGGTGCCGGTNGNTCGGNGN                                                  >  SRR4302543.2022142/1‑94 (MQ=60)

                                             GATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGC                                                  >  SRR4302543.3786785/1‑94 (MQ=60)

                                             GATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGC                                                  >  SRR4302543.3195406/1‑94 (MQ=60)

                                              ATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCG                                                 >  SRR4302543.173551/1‑94 (MQ=60)

                                               TGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGT                                                >  SRR4302543.7484461/1‑94 (MQ=60)

                                                GTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTG                                               >  SRR4302543.1244666/1‑94 (MQ=60)

                                                 TCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGG                                              <  SRR4302543.6614782/94‑1 (MQ=60)

                                                  CATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGT                                             >  SRR4302543.26219/1‑94 (MQ=60)

                                                  CATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGT                                             <  SRR4302543.6586547/94‑1 (MQ=60)

                                                  CATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGT                                             <  SRR4302543.3952041/94‑1 (MQ=60)

                                                  CATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGT                                             >  SRR4302543.3387727/1‑94 (MQ=60)

                                                  CATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGT                                             >  SRR4302543.26218/1‑94 (MQ=60)

                                                   ATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTT                                            >  SRR4302543.153653/1‑94 (MQ=60)

                                                   ATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTT                                            >  SRR4302543.354136/1‑94 (MQ=60)

                                                    TCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTT                                           >  SRR4302543.987082/1‑94 (MQ=60)

                                                    TCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTA                                           >  SRR4302543.5656989/1‑94 (MQ=60)

                                                     CGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTAT                                          <  SRR4302543.896808/94‑1 (MQ=60)

                                                     CGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTAT                                          >  SRR4302543.1999748/1‑94 (MQ=60)

                                                     CGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTAT                                          <  SRR4302543.4392392/94‑1 (MQ=60)

                                                       ACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTT                                        <  SRR4302543.7332599/94‑1 (MQ=60)

                                                       ACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTT                                        >  SRR4302543.2541009/1‑94 (MQ=60)

                                                        CTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTC                                       <  SRR4302543.5074474/94‑1 (MQ=60)

                                                          AATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTC                                     <  SRR4302543.2730138/94‑1 (MQ=60)

                                                           ATTCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCC                                    <  SRR4302543.2686323/94‑1 (MQ=60)

                                                             TCACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGG                                  >  SRR4302543.4181322/1‑94 (MQ=60)

                                                              CACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGA                                 <  SRR4302543.2142357/94‑1 (MQ=60)

                                                               ACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAG                                <  SRR4302543.1064506/94‑1 (MQ=60)

                                                               ACGAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAG                                <  SRR4302543.5911148/94‑1 (MQ=60)

                                                                 GAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTG                              <  SRR4302543.3719033/94‑1 (MQ=60)

                                                                 GAACGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTG                              >  SRR4302543.819807/1‑94 (MQ=60)

                                                                    CGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGCA                           >  SRR4302543.2168091/1‑94 (MQ=60)

                                                                    CGATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAA                           >  SRR4302543.312685/1‑94 (MQ=60)

                                                                     GATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAA                          >  SRR4302543.262519/1‑94 (MQ=60)

                                                                     GATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAA                          >  SRR4302543.7464516/1‑94 (MQ=60)

                                                                      ATTTTGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAG                         <  SRR4302543.2109188/94‑1 (MQ=60)

                                                                      ATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAG                         >  SRR4302543.7909750/1‑94 (MQ=60)

                                                                      ATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAG                         <  SRR4302543.1420107/94‑1 (MQ=60)

                                                                      ATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAG                         <  SRR4302543.6401587/94‑1 (MQ=60)

                                                                      ATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAG                         <  SRR4302543.4245562/94‑1 (MQ=60)

                                                                      ATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAA                         >  SRR4302543.2897612/1‑94 (MQ=60)

                                                                      ATTTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTGCTCCGGAGTGGAAAG                         <  SRR4302543.4245565/94‑1 (MQ=60)

                                                                        TTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAA                       >  SRR4302543.6531680/1‑94 (MQ=60)

                                                                        TTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAA                       <  SRR4302543.7167191/94‑1 (MQ=60)

                                                                        TTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAA                       <  SRR4302543.6697955/94‑1 (MQ=60)

                                                                        TTCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAA                       <  SRR4302543.4442901/94‑1 (MQ=60)

                                                                         TCGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAG                      <  SRR4302543.365947/94‑1 (MQ=60)

                                                                          CGTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGC                     <  SRR4302543.6241532/94‑1 (MQ=60)

                                                                           GTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCC                    >  SRR4302543.5972649/1‑94 (MQ=60)

                                                                           GTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCC                    <  SRR4302543.3392282/94‑1 (MQ=60)

                                                                           GTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCC                    <  SRR4302543.6701836/94‑1 (MQ=60)

                                                                           GTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCC                    <  SRR4302543.1319565/94‑1 (MQ=60)

                                                                           GTAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGCGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCC                    <  SRR4302543.6701835/94‑1 (MQ=60)

                                                                            TAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCG                   <  SRR4302543.4786020/94‑1 (MQ=60)

                                                                            TAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCG                   >  SRR4302543.1134832/1‑94 (MQ=60)

                                                                            TAAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCG                   <  SRR4302543.4786021/94‑1 (MQ=60)

                                                                             AAGTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGC                  >  SRR4302543.215980/1‑94 (MQ=60)

                                                                               GTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCA                >  SRR4302543.1644083/1‑94 (MQ=60)

                                                                               GTTAAATTACCCGGACGGGAGACATCACAACCATCCGCCACGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCA                >  SRR4302543.3332898/1‑94 (MQ=60)

                                                                                TTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCAT               <  SRR4302543.3251739/94‑1 (MQ=60)

                                                                                TTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCAT               <  SRR4302543.649285/94‑1 (MQ=60)

                                                                                TTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCAT               >  SRR4302543.1885429/1‑94 (MQ=60)

                                                                                TTAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCAT               <  SRR4302543.4567626/94‑1 (MQ=60)

                                                                                 TAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATG              >  SRR4302543.6856687/1‑94 (MQ=60)

                                                                                 TAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATG              <  SRR4302543.3436153/94‑1 (MQ=60)

                                                                                 TAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATG              <  SRR4302543.787674/94‑1 (MQ=60)

                                                                                 TAAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATG              <  SRR4302543.1477224/94‑1 (MQ=60)

                                                                                  AAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGC             <  SRR4302543.3481538/94‑1 (MQ=60)

                                                                                  AAATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGC             >  SRR4302543.7595140/1‑94 (MQ=60)

                                                                                   AATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCC            >  SRR4302543.968677/1‑94 (MQ=60)

                                                                                   AATTACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCC            >  SRR4302543.6200993/1‑94 (MQ=60)

                                                                                      TACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTG         <  SRR4302543.7395671/94‑1 (MQ=60)

                                                                                      TACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTG         <  SRR4302543.7752832/94‑1 (MQ=60)

                                                                                      TACCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGAGGAAAGAAGCCGCCATGCCGTG         >  SRR4302543.4810078/1‑94 (MQ=60)

                                                                                        CCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAC       >  SRR4302543.5859887/1‑94 (MQ=60)

                                                                                        CCCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAC       >  SRR4302543.5859888/1‑94 (MQ=60)

                                                                                         CCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAAC      <  SRR4302543.7494805/94‑1 (MQ=60)

                                                                                         CCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAAC      <  SRR4302543.4248328/94‑1 (MQ=60)

                                                                                         CCGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAAC      <  SRR4302543.168667/94‑1 (MQ=60)

                                                                                         CCGGACGGGAGACATCACAACCACGAGCAAGGGTGCTGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAAC      <  SRR4302543.4131958/94‑1 (MQ=60)

                                                                                          CGGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAACG     <  SRR4302543.832439/94‑1 (MQ=60)

                                                                                           GGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAACGT    >  SRR4302543.4310634/1‑94 (MQ=60)

                                                                                           GGACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAACGT    >  SRR4302543.6085803/1‑94 (MQ=60)

                                                                                            GACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAACGTT   >  SRR4302543.657089/1‑94 (MQ=60)

                                                                                            GACGGGAAACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAACGTT   <  SRR4302543.2103580/94‑1 (MQ=60)

                                                                                             GCGGGAGACATCACAACCAGCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAACGTTT  <  SRR4302543.3231360/94‑1 (MQ=60)

                                                                                             ACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAACGTTT  <  SRR4302543.4123301/94‑1 (MQ=60)

                                                                                             ACGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAACGTTT  <  SRR4302543.6339907/94‑1 (MQ=60)

TAAGGCAATCATACTGTTTCTGATTTCGTCTTCGCTGACCAGCACGATGTCATCGACTAATTCACGAACGATTTCGTAAGTTAAATTACCCGGGCGGGAGACATCACAACCATCCGCCAGGGTGCCGGTAGTTCGGTGCGTGGTTATTTCTCCGGAGTGGAAAGAAGCCGCCATGCCGTGAACGTTT  >  NC_000913/3262851‑3263037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`