Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,298,707 T→C T71A (ACC→GCC)  yhbT ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,298,7070TC99.5% 1215.9 / NA 387T71A (ACC→GCC) yhbThypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (177/207);  minor base A (1/1);  total (179/208)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 389 total aligned reads displayed.

CAATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGTAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGCGGA  >  NC_000913/3298617‑3298796
                                                                                          |                                                                                         
cAATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCaa                                                                                         >  2:1462546/1‑93 (MQ=255)
  atcatcAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAAc                                                                                       >  2:342944/1‑93 (MQ=255)
  atcatcAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAAc                                                                                       >  2:7799615/1‑93 (MQ=255)
   tcatcaGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAAcc                                                                                      >  2:5431143/1‑93 (MQ=255)
    catcaGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCa                                                                                     <  1:7643728/93‑1 (MQ=255)
    catcaGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCa                                                                                     <  1:2433126/93‑1 (MQ=255)
     atcaGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCAt                                                                                    <  1:7708863/93‑1 (MQ=255)
      tcaGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCAtt                                                                                   >  2:1779720/1‑93 (MQ=255)
      tcaGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCAtt                                                                                   >  1:17043/1‑93 (MQ=255)
      tcaGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCAtt                                                                                   <  1:3034552/93‑1 (MQ=255)
       cagcagATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTg                                                                                  <  1:7300422/93‑1 (MQ=255)
       cagcagATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTg                                                                                  >  2:1032388/1‑93 (MQ=255)
        agcagATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGc                                                                                 <  1:7142883/93‑1 (MQ=255)
         gcagATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCa                                                                                >  1:5397815/1‑93 (MQ=255)
          cagATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGGGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAg                                                                               <  1:5530631/93‑1 (MQ=255)
          cagATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAg                                                                               <  1:3555509/93‑1 (MQ=255)
          cagATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAATTGGCCATTCACCACCGAGGCAAACCATTGCAg                                                                               <  2:7604254/93‑1 (MQ=255)
           ataTCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAgg                                                                              <  1:7442977/91‑1 (MQ=255)
           agATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAgg                                                                              <  2:4970892/93‑1 (MQ=255)
           agATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAgg                                                                              <  2:6033869/93‑1 (MQ=255)
            gATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGt                                                                             >  1:1875928/1‑93 (MQ=255)
            gATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGt                                                                             <  1:5862658/93‑1 (MQ=255)
            gATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGt                                                                             >  2:162102/1‑93 (MQ=255)
              tCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCa                                                                           >  2:357808/1‑93 (MQ=255)
                gCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAat                                                                         <  2:7826985/93‑1 (MQ=255)
                  tGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAatat                                                                       >  1:3336969/1‑93 (MQ=255)
                  tGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAatat                                                                       <  2:778950/93‑1 (MQ=255)
                  tGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGAAAACCATTGCAGGTCAatat                                                                       >  1:6581119/1‑93 (MQ=255)
                   ggCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATc                                                                      >  1:2864844/1‑93 (MQ=255)
                   ggCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATc                                                                      >  2:5638500/1‑93 (MQ=255)
                    gCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCCCCACCGAGGCAAACCATTGCAGGTCAATATCa                                                                     <  2:7252514/93‑1 (MQ=255)
                    gCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGTAGGTCTATATCa                                                                     >  2:7025538/1‑93 (MQ=255)
                       tCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGc                                                                  >  1:5268116/1‑93 (MQ=255)
                       tCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGc                                                                  >  2:2186444/1‑93 (MQ=255)
                        cGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGca                                                                 >  2:3807209/1‑93 (MQ=255)
                          gCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGcaca                                                               <  1:6995354/93‑1 (MQ=255)
                            aCTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATg                                                             >  1:113300/1‑93 (MQ=255)
                            aCTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATg                                                             >  1:4241060/1‑93 (MQ=255)
                            aCTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATg                                                             >  2:622937/1‑93 (MQ=255)
                               aaaaCTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAAt                                                          <  1:3602755/93‑1 (MQ=255)
                               aaaaCTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAAt                                                          >  1:2668595/1‑93 (MQ=255)
                                aaaCTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATa                                                         <  1:2117589/93‑1 (MQ=255)
                                 aaCTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATAc                                                        <  1:2206989/93‑1 (MQ=255)
                                  aCTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACt                                                       <  1:5777817/93‑1 (MQ=255)
                                   cTCACATCAGCTTGCGCGTTCTGGCTAACAACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACtt                                                      <  1:6299774/93‑1 (MQ=255)
                                    tCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTa                                                     >  1:640431/1‑93 (MQ=255)
                                    tCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTa                                                     <  1:1469137/93‑1 (MQ=255)
                                     cacaTCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTaa                                                    <  2:864963/93‑1 (MQ=255)
                                     cacaTCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTaa                                                    >  1:4339410/1‑93 (MQ=255)
                                       caTCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAAcc                                                  >  2:3061991/1‑93 (MQ=255)
                                       caTCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAAcc                                                  >  2:2643942/1‑93 (MQ=255)
                                        aTCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCa                                                 <  2:4727053/93‑1 (MQ=255)
                                        aTCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCa                                                 >  1:4030011/1‑93 (MQ=255)
                                         tCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAg                                                <  1:6694774/93‑1 (MQ=255)
                                          cAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGc                                               <  1:4443851/93‑1 (MQ=255)
                                           aGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCg                                              <  2:5354071/93‑1 (MQ=255)
                                           aGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCg                                              >  2:4051699/1‑93 (MQ=255)
                                            gCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCgg                                             >  1:7081905/1‑93 (MQ=255)
                                             cTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGc                                            >  1:6171793/1‑93 (MQ=255)
                                              ttGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGcc                                           >  2:5263217/1‑93 (MQ=255)
                                                gcgcGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAGCCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCtt                                         >  1:2048589/1‑93 (MQ=255)
                                                gcgcGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCtt                                         <  2:2532703/93‑1 (MQ=255)
                                                gcgcGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCtt                                         >  2:1407774/1‑93 (MQ=255)
                                                  gcgTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCa                                       <  1:4518971/93‑1 (MQ=255)
                                                   cgTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCaa                                      <  2:5509597/93‑1 (MQ=255)
                                                    gTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAg                                     <  1:3821025/93‑1 (MQ=255)
                                                     ttCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGa                                    >  2:6689967/1‑93 (MQ=255)
                                                     ttCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGa                                    >  1:779296/1‑93 (MQ=255)
                                                       cTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGaaa                                  <  2:3362449/93‑1 (MQ=255)
                                                        tGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAAc                                 <  2:7544909/93‑1 (MQ=255)
                                                        tGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAAc                                 >  1:1199246/1‑93 (MQ=255)
                                                         ggCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACt                                >  2:5725662/1‑93 (MQ=255)
                                                          gCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTc                               >  2:5058634/1‑93 (MQ=255)
                                                          gCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTc                               <  2:6294008/93‑1 (MQ=255)
                                                           cTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTcc                              <  2:4503547/93‑1 (MQ=255)
                                                           cTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTcc                              <  2:4840103/93‑1 (MQ=255)
                                                            tAACGACCAGTTGGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCa                             <  1:1012595/93‑1 (MQ=255)
                                                              aCGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGc                           <  1:2319654/93‑1 (MQ=255)
                                                                gACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTc                         >  1:1046250/1‑93 (MQ=255)
                                                                gACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTc                         <  2:2511695/93‑1 (MQ=255)
                                                                gACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTc                         <  2:2317429/93‑1 (MQ=255)
                                                                gACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTc                         >  2:4579610/1‑93 (MQ=255)
                                                                 aCCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCg                        >  1:2740331/1‑93 (MQ=255)
                                                                    aGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCca                     >  2:3951160/1‑93 (MQ=255)
                                                                    aGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCca                     <  1:4908318/93‑1 (MQ=255)
                                                                     gTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCATATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCcat                    <  2:6497470/93‑1 (MQ=255)
                                                                       ttGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCcatca                  <  2:4243453/93‑1 (MQ=255)
                                                                         gCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCatcatc                >  2:3655381/1‑93 (MQ=255)
                                                                           cATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCATCTCGCCATCATCCa              >  1:4702575/1‑93 (MQ=255)
                                                                            aTTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAg             <  1:689073/93‑1 (MQ=255)
                                                                            aTTCACCACCGAGACAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAg             <  1:877264/93‑1 (MQ=255)
                                                                             ttCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAgc            <  2:2288839/93‑1 (MQ=255)
                                                                              tCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAgcc           >  1:5573056/1‑92 (MQ=255)
                                                                                 ccaccGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCt        <  1:6669806/93‑1 (MQ=255)
                                                                                 ccaccGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCt        <  2:7326592/93‑1 (MQ=255)
                                                                                 ccaccGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCt        >  2:3697927/1‑93 (MQ=255)
                                                                                   accGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTgg      >  2:6848041/1‑93 (MQ=255)
                                                                                   accGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTgg      <  1:5096338/93‑1 (MQ=255)
                                                                                   accGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTgg      >  1:1280018/1‑93 (MQ=255)
                                                                                       aGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGCGGa  >  2:3283391/1‑93 (MQ=255)
                                                                                          |                                                                                         
CAATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGTAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGCGGA  >  NC_000913/3298617‑3298796

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 211 total aligned reads displayed.
CCGCAATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGTAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGCGGAATTG  >  NC_000913/3298614‑3298800
                                                                                             |                                                                                             
CCGCAATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGC                                                                                               >  SRR4302543.3171234/1‑94 (MQ=60)
CCGCAATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGC                                                                                               <  SRR4302543.5661426/94‑1 (MQ=60)
 CGCAATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCA                                                                                              >  SRR4302543.7300015/1‑94 (MQ=60)
 CGCAATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCA                                                                                              <  SRR4302543.7786637/94‑1 (MQ=60)
   CAATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAA                                                                                            <  SRR4302543.5328794/94‑1 (MQ=60)
    AATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAAC                                                                                           <  SRR4302543.4606420/94‑1 (MQ=60)
    AATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAAC                                                                                           <  SRR4302543.3043679/94‑1 (MQ=60)
     ATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACC                                                                                          >  SRR4302543.7357588/1‑94 (MQ=60)
     ATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACC                                                                                          <  SRR4302543.2355000/94‑1 (MQ=60)
     ATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACC                                                                                          >  SRR4302543.6249481/1‑94 (MQ=60)
      TCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCA                                                                                         >  SRR4302543.128674/1‑94 (MQ=60)
       CATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCAT                                                                                        <  SRR4302543.7716219/94‑1 (MQ=60)
       CATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCAT                                                                                        <  SRR4302543.2455083/94‑1 (MQ=60)
       CATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCAT                                                                                        <  SRR4302543.7274576/94‑1 (MQ=60)
        ATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATT                                                                                       <  SRR4302543.7781787/94‑1 (MQ=60)
        ATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATT                                                                                       <  SRR4302543.5592406/94‑1 (MQ=60)
        ATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATT                                                                                       <  SRR4302543.7383169/94‑1 (MQ=60)
        ATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATT                                                                                       >  SRR4302543.17202/1‑94 (MQ=60)
        ATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATT                                                                                       <  SRR4302543.7888331/94‑1 (MQ=60)
        ATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATT                                                                                       >  SRR4302543.6737415/1‑94 (MQ=60)
        ATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACAATT                                                                                       >  SRR4302543.6737414/1‑94 (MQ=60)
         TCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTG                                                                                      <  SRR4302543.2016358/94‑1 (MQ=60)
         TCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTG                                                                                      <  SRR4302543.3061942/94‑1 (MQ=60)
         TCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTG                                                                                      <  SRR4302543.3372219/94‑1 (MQ=60)
         TCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTG                                                                                      <  SRR4302543.6611458/94‑1 (MQ=60)
          CAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGC                                                                                     <  SRR4302543.6541496/94‑1 (MQ=60)
          CAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGC                                                                                     <  SRR4302543.7370839/94‑1 (MQ=60)
           AGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCA                                                                                    <  SRR4302543.7212291/94‑1 (MQ=60)
           AGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCA                                                                                    >  SRR4302543.5446903/1‑94 (MQ=60)
           AGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCA                                                                                    >  SRR4302543.8010628/1‑94 (MQ=60)
           AGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCA                                                                                    >  SRR4302543.7822469/1‑94 (MQ=60)
            GCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAG                                                                                   <  SRR4302543.1188291/94‑1 (MQ=60)
             CAGATCGCTGGCGTCGGCACTAAACCTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCCACACCGAGGCAAACCATTGCAGG                                                                                  <  SRR4302543.1387583/94‑1 (MQ=60)
             CAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGGGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGG                                                                                  <  SRR4302543.5580877/94‑1 (MQ=60)
             CAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGG                                                                                  <  SRR4302543.1133981/94‑1 (MQ=60)
             CAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGG                                                                                  <  SRR4302543.3587025/94‑1 (MQ=60)
             CAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGG                                                                                  <  SRR4302543.5580636/94‑1 (MQ=60)
              ATATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGT                                                                                 <  SRR4302543.7514313/94‑1 (MQ=60)
              AGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGT                                                                                 <  SRR4302543.2506923/94‑1 (MQ=60)
              AGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGT                                                                                 <  SRR4302543.6464159/94‑1 (MQ=60)
              AGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGT                                                                                 >  SRR4302543.1892783/1‑94 (MQ=60)
              AGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGT                                                                                 <  SRR4302543.1081927/94‑1 (MQ=60)
               GATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTC                                                                                <  SRR4302543.5916020/94‑1 (MQ=60)
                ATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCA                                                                               >  SRR4302543.2892514/1‑94 (MQ=60)
                  CGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAAT                                                                             <  SRR4302543.2113339/94‑1 (MQ=60)
                  CGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAAT                                                                             <  SRR4302543.5561597/94‑1 (MQ=60)
                  CGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAAT                                                                             >  SRR4302543.5188225/1‑94 (MQ=60)
                   GCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATA                                                                            >  SRR4302543.771483/1‑94 (MQ=60)
                   GCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATA                                                                            >  SRR4302543.6448042/1‑94 (MQ=60)
                   GCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATA                                                                            >  SRR4302543.1268281/1‑94 (MQ=60)
                    CTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATAT                                                                           <  SRR4302543.4278719/94‑1 (MQ=60)
                    CTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATAT                                                                           <  SRR4302543.4340159/94‑1 (MQ=60)
                    CTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATAT                                                                           >  SRR4302543.3367033/1‑94 (MQ=60)
                    CTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATAT                                                                           <  SRR4302543.2751215/94‑1 (MQ=60)
                    CTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGAAAACCATTGCAGGTCAATAT                                                                           >  SRR4302543.6643097/1‑94 (MQ=60)
                     TGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATC                                                                          >  SRR4302543.545666/1‑94 (MQ=60)
                     TGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATC                                                                          >  SRR4302543.2890959/1‑94 (MQ=60)
                      GGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCA                                                                         <  SRR4302543.6324201/94‑1 (MQ=60)
                      GGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCA                                                                         <  SRR4302543.1870994/94‑1 (MQ=60)
                       GCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCAC                                                                        <  SRR4302543.1043017/94‑1 (MQ=60)
                       GCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCAC                                                                        <  SRR4302543.1436220/94‑1 (MQ=60)
                         GTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGC                                                                      <  SRR4302543.1419010/94‑1 (MQ=60)
                         GTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGC                                                                      >  SRR4302543.5315646/1‑94 (MQ=60)
                         GTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGC                                                                      >  SRR4302543.5315645/1‑94 (MQ=60)
                          TCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCA                                                                     <  SRR4302543.4186063/94‑1 (MQ=60)
                           CGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCAC                                                                    >  SRR4302543.2000348/1‑94 (MQ=60)
                            GGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACA                                                                   >  SRR4302543.3334637/1‑94 (MQ=60)
                             GCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACAT                                                                  <  SRR4302543.249032/94‑1 (MQ=60)
                             GCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACAT                                                                  >  SRR4302543.1534842/1‑94 (MQ=60)
                             GCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACAT                                                                  <  SRR4302543.1641694/94‑1 (MQ=60)
                             GCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACAT                                                                  <  SRR4302543.6317437/94‑1 (MQ=60)
                             GCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACAT                                                                  <  SRR4302543.7061330/94‑1 (MQ=60)
                              CACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATG                                                                 <  SRR4302543.5248704/94‑1 (MQ=60)
                              CACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATG                                                                 <  SRR4302543.5805674/94‑1 (MQ=60)
                              CACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATG                                                                 >  SRR4302543.114330/1‑94 (MQ=60)
                              CACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATG                                                                 >  SRR4302543.4279540/1‑94 (MQ=60)
                               ACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGA                                                                >  SRR4302543.3859433/1‑94 (MQ=60)
                                 TAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAAT                                                              >  SRR4302543.2692791/1‑94 (MQ=60)
                                 TAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAAT                                                              >  SRR4302543.271117/1‑94 (MQ=60)
                                  AAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATA                                                             <  SRR4302543.6747553/94‑1 (MQ=60)
                                  AAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATA                                                             <  SRR4302543.3634548/94‑1 (MQ=60)
                                   AAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATAC                                                            <  SRR4302543.6652384/94‑1 (MQ=60)
                                   AAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATAC                                                            <  SRR4302543.2136544/94‑1 (MQ=60)
                                   AAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATAC                                                            <  SRR4302543.2060105/94‑1 (MQ=60)
                                   AAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATAC                                                            >  SRR4302543.367604/1‑94 (MQ=60)
                                    AACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACT                                                           >  SRR4302543.4116361/1‑94 (MQ=60)
                                    AACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACT                                                           <  SRR4302543.2226868/94‑1 (MQ=60)
                                    AACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACT                                                           <  SRR4302543.6064427/94‑1 (MQ=60)
                                    AACTCACAACGGCTTGCACGTTCTGGCTAACGACCAGTTTGCAATTCACCAACGAGGAAAAACATTGCAGGTCAATATCACGCACATGAATACT                                                           <  SRR4302543.7089406/94‑1 (MQ=60)
                                     ACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTT                                                          <  SRR4302543.715504/94‑1 (MQ=60)
                                     ACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTT                                                          <  SRR4302543.5830409/94‑1 (MQ=60)
                                      CTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTA                                                         >  SRR4302543.3749224/1‑94 (MQ=60)
                                      CTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTA                                                         <  SRR4302543.2389950/94‑1 (MQ=60)
                                      CTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTA                                                         >  SRR4302543.6476665/1‑94 (MQ=60)
                                      CTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTA                                                         >  SRR4302543.754936/1‑94 (MQ=60)
                                      CTCACATCAGCTTGCGCGTTCTGGCTAACAACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTA                                                         <  SRR4302543.6359056/94‑1 (MQ=60)
                                       TCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAA                                                        >  SRR4302543.4378773/1‑94 (MQ=60)
                                       TCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAA                                                        >  SRR4302543.1163207/1‑94 (MQ=60)
                                       TCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAA                                                        >  SRR4302543.2309549/1‑94 (MQ=60)
                                        CACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAAC                                                       <  SRR4302543.7516752/94‑1 (MQ=60)
                                        CACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAAC                                                       <  SRR4302543.2410098/94‑1 (MQ=60)
                                          CATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCA                                                     <  SRR4302543.4340476/94‑1 (MQ=60)
                                          CATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCA                                                     >  SRR4302543.4066036/1‑94 (MQ=60)
                                          CATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCA                                                     <  SRR4302543.3860244/94‑1 (MQ=60)
                                           ATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAG                                                    <  SRR4302543.1142817/94‑1 (MQ=60)
                                           ATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAG                                                    >  SRR4302543.2071100/1‑94 (MQ=60)
                                           ATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAG                                                    <  SRR4302543.5903582/94‑1 (MQ=60)
                                           ATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAG                                                    >  SRR4302543.5832712/1‑94 (MQ=60)
                                            TCAGCTTGCGCGTTCTGGCTAACGTCCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGC                                                   <  SRR4302543.6984590/94‑1 (MQ=60)
                                            TCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCGCGCACATGAATACTTAACCAGC                                                   <  SRR4302543.7837673/94‑1 (MQ=60)
                                            TCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGC                                                   <  SRR4302543.6757963/94‑1 (MQ=60)
                                            TCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGC                                                   <  SRR4302543.7837672/94‑1 (MQ=60)
                                             CAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCGCCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCG                                                  <  SRR4302543.6715162/94‑1 (MQ=60)
                                             CAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCG                                                  >  SRR4302543.5590858/1‑94 (MQ=60)
                                             CAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCG                                                  <  SRR4302543.976701/94‑1 (MQ=60)
                                             CAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCG                                                  <  SRR4302543.4484090/94‑1 (MQ=60)
                                              AGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGG                                                 >  SRR4302543.7150682/1‑94 (MQ=60)
                                              AGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGG                                                 <  SRR4302543.2797148/94‑1 (MQ=60)
                                              AGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGG                                                 >  SRR4302543.5973979/1‑94 (MQ=60)
                                               GCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGC                                                >  SRR4302543.6230170/1‑94 (MQ=60)
                                                 TTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCT                                              >  SRR4302543.2860506/1‑94 (MQ=60)
                                                  TGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAGCCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTT                                             >  SRR4302543.2066939/1‑94 (MQ=60)
                                                  TGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTT                                             <  SRR4302543.5004908/94‑1 (MQ=60)
                                                  TGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTT                                             <  SRR4302543.3598487/94‑1 (MQ=60)
                                                    CGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCA                                           >  SRR4302543.2982880/1‑94 (MQ=60)
                                                     GCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAA                                          <  SRR4302543.4560071/94‑1 (MQ=60)
                                                      CGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAG                                         <  SRR4302543.2560356/94‑1 (MQ=60)
                                                      CGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAG                                         <  SRR4302543.898333/94‑1 (MQ=60)
                                                      CGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAG                                         >  SRR4302543.7052921/1‑94 (MQ=60)
                                                       GTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGA                                        <  SRR4302543.3854719/94‑1 (MQ=60)
                                                       GTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGA                                        >  SRR4302543.3477706/1‑94 (MQ=60)
                                                       GTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGA                                        >  SRR4302543.786141/1‑94 (MQ=60)
                                                       GTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGA                                        >  SRR4302543.7189623/1‑94 (MQ=60)
                                                          CTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAAC                                     >  SRR4302543.1210044/1‑94 (MQ=60)
                                                          CTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAAC                                     <  SRR4302543.3121700/94‑1 (MQ=60)
                                                          CTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAAC                                     <  SRR4302543.3856121/94‑1 (MQ=60)
                                                           TGTCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACT                                    <  SRR4302543.2707370/94‑1 (MQ=60)
                                                           TGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACT                                    >  SRR4302543.7882049/1‑94 (MQ=60)
                                                            GGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTC                                   >  SRR4302543.4434917/1‑94 (MQ=60)
                                                             GCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCC                                  <  SRR4302543.1805460/94‑1 (MQ=60)
                                                              CTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCA                                 <  SRR4302543.538711/94‑1 (MQ=60)
                                                              CTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCA                                 <  SRR4302543.5620084/94‑1 (MQ=60)
                                                              CTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCA                                 <  SRR4302543.4337041/94‑1 (MQ=60)
                                                               TAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAG                                <  SRR4302543.1021551/94‑1 (MQ=60)
                                                               TAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAG                                >  SRR4302543.3397383/1‑94 (MQ=60)
                                                               TAACGACCAGTTGGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAG                                <  SRR4302543.1021550/94‑1 (MQ=60)
                                                                AACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGC                               >  SRR4302543.4546178/1‑94 (MQ=60)
                                                                 ACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCT                              <  SRR4302543.1645868/94‑1 (MQ=60)
                                                                 ACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCT                              <  SRR4302543.2340741/94‑1 (MQ=60)
                                                                 ACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCT                              >  SRR4302543.667212/1‑94 (MQ=60)
                                                                  CGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTC                             >  SRR4302543.1055616/1‑94 (MQ=60)
                                                                  CGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTC                             <  SRR4302543.7486403/94‑1 (MQ=60)
                                                                  CGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTC                             <  SRR4302543.4725918/94‑1 (MQ=60)
                                                                   GACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCG                            >  SRR4302543.1235679/1‑94 (MQ=60)
                                                                   GACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCG                            >  SRR4302543.2765258/1‑94 (MQ=60)
                                                                     CCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCC                          >  SRR4302543.6218810/1‑94 (MQ=60)
                                                                     CCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCC                          >  SRR4302543.6781909/1‑94 (MQ=60)
                                                                     CCAGTTTACCATTCACCACCGAGGCAAACCATGGCAGGTCAATATCACGCACATGAATACTAAACCAGCGGCCTTCAAGAAACTCCAGCTCGCC                          <  SRR4302543.117564/94‑1 (MQ=60)
                                                                      CAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCA                         >  SRR4302543.4509700/1‑94 (MQ=60)
                                                                       AGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCAT                        <  SRR4302543.4953052/94‑1 (MQ=60)
                                                                       AGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCAT                        >  SRR4302543.6766124/1‑94 (MQ=60)
                                                                       AGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCAT                        <  SRR4302543.4953053/94‑1 (MQ=60)
                                                                       AGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCAT                        >  SRR4302543.2256303/1‑94 (MQ=60)
                                                                       AGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCAT                        <  SRR4302543.7769761/94‑1 (MQ=60)
                                                                        GTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATC                       >  SRR4302543.7319246/1‑94 (MQ=60)
                                                                         TTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCA                      <  SRR4302543.77230/94‑1 (MQ=60)
                                                                         TTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCA                      <  SRR4302543.7131488/94‑1 (MQ=60)
                                                                         TTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCA                      <  SRR4302543.7158396/94‑1 (MQ=60)
                                                                         TTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCA                      >  SRR4302543.3089889/1‑94 (MQ=60)
                                                                           TGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATC                    >  SRR4302543.4648030/1‑94 (MQ=60)
                                                                             CCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCATCTCGCCATCATCCA                  >  SRR4302543.4745535/1‑94 (MQ=60)
                                                                             CCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCA                  <  SRR4302543.2265435/94‑1 (MQ=60)
                                                                             CCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCA                  >  SRR4302543.217889/1‑94 (MQ=60)
                                                                              CATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAG                 >  SRR4302543.623411/1‑94 (MQ=60)
                                                                              CATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAG                 >  SRR4302543.494457/1‑94 (MQ=60)
                                                                               ATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGC                <  SRR4302543.695409/94‑1 (MQ=60)
                                                                               ATTCACCACCGAGACAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGC                <  SRR4302543.885060/94‑1 (MQ=60)
                                                                                TTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCG               <  SRR4302543.5905908/94‑1 (MQ=60)
                                                                                TTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCG               <  SRR4302543.4809754/94‑1 (MQ=60)
                                                                                TTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCC               >  SRR4302543.5623778/1‑94 (MQ=60)
                                                                                  CACCACTGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCC             >  SRR4302543.4385785/1‑94 (MQ=60)
                                                                                  CACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCC             >  SRR4302543.4481532/1‑94 (MQ=60)
                                                                                   ACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCT            >  SRR4302543.5105176/1‑94 (MQ=60)
                                                                                    CCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTG           >  SRR4302543.1736578/1‑94 (MQ=60)
                                                                                    CCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTG           <  SRR4302543.3806961/94‑1 (MQ=60)
                                                                                    CCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTG           <  SRR4302543.6732780/94‑1 (MQ=60)
                                                                                     CACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGG          <  SRR4302543.2106624/94‑1 (MQ=60)
                                                                                     CACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGG          >  SRR4302543.1291429/1‑94 (MQ=60)
                                                                                     CACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGG          >  SRR4302543.6946128/1‑94 (MQ=60)
                                                                                      ACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGC         <  SRR4302543.5142492/94‑1 (MQ=60)
                                                                                      ACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGC         >  SRR4302543.451869/1‑94 (MQ=60)
                                                                                         GAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGCGGA      >  SRR4302543.5704082/1‑94 (MQ=60)
                                                                                          AGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGCGGAA     >  SRR4302543.2018016/1‑94 (MQ=60)
                                                                                           GGCAACCCATTGCAGGGCAATATCACGCACATGAATACTTAACCAGGGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGCGGAAT    <  SRR4302543.5601190/94‑1 (MQ=60)
                                                                                           GGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGCGGAAT    <  SRR4302543.5601183/94‑1 (MQ=60)
                                                                                            GCAAACCATTGCGGGTCATTATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATTATCCAGCGCCTGGCGGAATT   <  SRR4302543.3248408/94‑1 (MQ=60)
                                                                                            GCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGCGGAATT   <  SRR4302543.5412497/94‑1 (MQ=60)
                                                                                            GCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGCGGAATT   <  SRR4302543.5908817/94‑1 (MQ=60)
                                                                                             CAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGCGGAATTG  >  SRR4302543.8005087/1‑94 (MQ=60)
                                                                                             CAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGCGGAATTG  >  SRR4302543.2993070/1‑94 (MQ=60)
                                                                                             |                                                                                             
CCGCAATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGTAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGCGGAATTG  >  NC_000913/3298614‑3298800

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑