Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,352,410	C→T	I48I (ATC→ATT)	gltB →	glutamate synthase large subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,352,410	0	C	T	99.7%	1147.5 / ‑5.9	317	I48I (ATC→ATT)	gltB	glutamate synthase large subunit
Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (168/146); total (169/148)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.52e-01

Only 100 of 323 total aligned reads displayed.

GAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGC  >  NC_000913/3352321‑3352499

  aGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCca                                                                                      <  1:7438918/93‑1 (MQ=255)

    tGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCcaca                                                                                    >  2:1049781/1‑93 (MQ=255)

    tGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCcaca                                                                                    >  2:2595764/1‑93 (MQ=255)

    tGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCcaca                                                                                    >  1:2535710/1‑93 (MQ=255)

     ggggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACAt                                                                                   <  2:1845095/93‑1 (MQ=255)

     ggggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACAt                                                                                   <  2:3681184/93‑1 (MQ=255)

      gggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATa                                                                                  <  2:3859652/93‑1 (MQ=255)

      gggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATa                                                                                  <  2:3946796/93‑1 (MQ=255)

       ggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAg                                                                                 >  1:5123404/1‑93 (MQ=255)

       ggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAg                                                                                 <  2:4402781/93‑1 (MQ=255)

        gTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGa                                                                                <  1:3307482/93‑1 (MQ=255)

         ttCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGaa                                                                               <  1:7265234/93‑1 (MQ=255)

         ttCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGaa                                                                               >  2:7795704/1‑93 (MQ=255)

         ttCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGaa                                                                               >  2:4944419/1‑93 (MQ=255)

         ttCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGaa                                                                               >  2:587176/1‑93 (MQ=255)

          tCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAg                                                                              <  2:1975805/93‑1 (MQ=255)

           cccGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAgg                                                                             <  2:6186336/93‑1 (MQ=255)

            ccGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGc                                                                            <  1:5666572/93‑1 (MQ=255)

               cAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGaa                                                                         <  2:7266138/93‑1 (MQ=255)

                agagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAc                                                                        <  2:6094894/93‑1 (MQ=255)

                agagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAc                                                                        >  2:2517360/1‑93 (MQ=255)

                agagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAc                                                                        >  1:1729119/1‑93 (MQ=255)

                 gagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAcc                                                                       >  1:3894449/1‑93 (MQ=255)

                 gagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAcc                                                                       >  1:4090391/1‑93 (MQ=255)

                 gagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAcc                                                                       >  2:6430059/1‑93 (MQ=255)

                  agCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGTGATAACTGTGGTTTCGTCCTGATTGCCCACATAGAAGGCGAACCt                                                                      <  2:2780311/93‑1 (MQ=255)

                      tGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGcc                                                                  >  2:3343580/1‑93 (MQ=255)

                      tGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGcc                                                                  >  2:4253251/1‑93 (MQ=255)

                        ggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCcac                                                                >  1:4474570/1‑93 (MQ=255)

                         gggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCcaca                                                               <  2:6615946/93‑1 (MQ=255)

                          ggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACaa                                                              <  2:3208637/93‑1 (MQ=255)

                           gAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAg                                                             <  1:3703849/93‑1 (MQ=255)

                            aGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAgg                                                            <  1:4520724/93‑1 (MQ=255)

                             ggTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTAGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGt                                                           >  1:1099680/1‑93 (MQ=255)

                              gTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTa                                                          <  1:3549084/93‑1 (MQ=255)

                              gTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTa                                                          <  2:447735/93‑1 (MQ=255)

                               ttCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAg                                                         <  1:3356431/93‑1 (MQ=255)

                               ttCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAg                                                         >  2:3161095/1‑93 (MQ=255)

                                 cACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTg                                                       >  2:7488391/1‑93 (MQ=255)

                                  aCGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGc                                                      <  1:3463952/93‑1 (MQ=255)

                                  aCGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGc                                                      >  2:3454963/1‑93 (MQ=255)

                                  aCGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGACTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGc                                                      <  2:2846565/93‑1 (MQ=255)

                                     atatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTa                                                   <  1:6998736/93‑1 (MQ=255)

                                     atatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTa                                                   >  2:3022213/1‑93 (MQ=255)

                                     atatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTa                                                   <  1:7681396/93‑1 (MQ=255)

                                      tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc                                                  >  1:5222608/1‑93 (MQ=255)

                                      tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc                                                  >  1:395756/1‑93 (MQ=255)

                                      tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc                                                  <  1:419285/93‑1 (MQ=255)

                                      tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATAGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGAGCGTAc                                                  <  2:4183067/93‑1 (MQ=255)

                                        tgttgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTg                                                >  1:4290404/1‑93 (MQ=255)

                                        tgttgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTg                                                <  2:3611960/93‑1 (MQ=255)

                                        tgttgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTg                                                >  1:3691765/1‑93 (MQ=255)

                                         gttgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGc                                               >  1:6661156/1‑93 (MQ=255)

                                            gtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAt                                            <  2:128596/93‑1 (MQ=255)

                                            gtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAt                                            >  1:1366060/1‑93 (MQ=255)

                                              aCGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATac                                          <  2:5776158/93‑1 (MQ=255)

                                              aCGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATac                                          >  1:6317138/1‑93 (MQ=255)

                                               cGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATaca                                         <  1:5345851/93‑1 (MQ=255)

                                               cGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATaca                                         >  1:5774314/1‑93 (MQ=255)

                                                gATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATacac                                        >  1:1015753/1‑93 (MQ=255)

                                                gATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATacac                                        >  1:2573026/1‑93 (MQ=255)

                                                gATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATacac                                        <  1:7508429/93‑1 (MQ=255)

                                                gATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATacac                                        >  1:5486047/1‑93 (MQ=255)

                                                 aTAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACg                                       <  1:7562696/93‑1 (MQ=255)

                                                  tAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGc                                      >  2:7849387/1‑93 (MQ=255)

                                                   aaaTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATGGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCa                                     >  2:7354947/1‑93 (MQ=255)

                                                   aaaTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCa                                     >  1:1904875/1‑93 (MQ=255)

                                                   aaaTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCa                                     >  1:6398687/1‑93 (MQ=255)

                                                    aaTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAc                                    >  1:3781013/1‑93 (MQ=255)

                                                    aaTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAc                                    <  1:4075136/93‑1 (MQ=255)

                                                    aaTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAc                                    >  1:4591709/1‑93 (MQ=255)

                                                     aTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACt                                   >  1:6254065/1‑93 (MQ=255)

                                                      tCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTg                                  <  2:5200005/93‑1 (MQ=255)

                                                      tCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTg                                  >  2:2098192/1‑93 (MQ=255)

                                                       cccTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTgg                                 <  2:789004/93‑1 (MQ=255)

                                                       cccTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTgg                                 >  2:2418735/1‑93 (MQ=255)

                                                       cccTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTgg                                 >  2:5644696/1‑93 (MQ=255)

                                                        ccTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGACCCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGc                                <  2:5116148/93‑1 (MQ=255)

                                                        ccTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGc                                >  2:855735/1‑93 (MQ=255)

                                                            gagaGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGc                            >  2:1808833/1‑93 (MQ=255)

                                                              gagGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCAt                          >  2:1449585/1‑93 (MQ=255)

                                                               agGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATg                         >  1:2124322/1‑93 (MQ=255)

                                                                 ggATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgca                       <  2:533045/93‑1 (MQ=255)

                                                                        tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGt                <  1:5926857/93‑1 (MQ=255)

                                                                        tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGt                <  2:6830451/93‑1 (MQ=255)

                                                                        tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGt                >  2:476034/1‑93 (MQ=255)

                                                                        tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGt                >  1:894732/1‑93 (MQ=255)

                                                                        tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACCGCAATACACGCACTGGCCCGCATGCAGCACCGt                >  1:7650384/1‑93 (MQ=255)

                                                                          tgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTgg              <  1:2296106/93‑1 (MQ=255)

                                                                             tttCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGgcgc           <  2:3908062/93‑1 (MQ=255)

                                                                                cGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAt        <  2:6850050/93‑1 (MQ=255)

                                                                                cGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAt        <  1:7176059/93‑1 (MQ=255)

                                                                                  gCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAGTACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtc      >  1:7759299/1‑93 (MQ=255)

                                                                                  gCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtc      <  2:7628471/93‑1 (MQ=255)

                                                                                  gCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACCGGCCCGCATGAAGCACCGTGGCGCGATtc      >  1:4838574/1‑93 (MQ=255)

                                                                                   ccTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGATAGTGCGTACTGCAATACACGCCCTGGCCCGCATGCAGCACCGTGGGGCGATtct     >  1:6031988/1‑93 (MQ=255)

                                                                                    cTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtctc    >  2:1215067/1‑93 (MQ=255)

                                                                                    cTGATTGCCCACATAGAAGGCAAACTTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtctc    <  2:458396/93‑1 (MQ=255)

                                                                                      gATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGc  >  2:1656824/1‑93 (MQ=255)

                                                                                      gATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGc  <  1:320769/93‑1 (MQ=255)

GAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGC  >  NC_000913/3352321‑3352499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTCGGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCGAT  >  NC_000913/3352317‑3352503

TTCGGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATT                                                                                               <  SRR4302543.3839729/94‑1 (MQ=60)

GTCGGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATT                                                                                               <  SRR4302543.5037361/94‑1 (MQ=60)

   GGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCC                                                                                            >  SRR4302543.6688181/1‑94 (MQ=60)

    GAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCC                                                                                           <  SRR4302543.4190528/94‑1 (MQ=60)

     AAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCA                                                                                          >  SRR4302543.4261500/1‑94 (MQ=60)

      AGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCAC                                                                                         <  SRR4302543.7510220/94‑1 (MQ=60)

       GTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACA                                                                                        >  SRR4302543.2558812/1‑94 (MQ=60)

         GGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATA                                                                                      >  SRR4302543.3975329/1‑94 (MQ=60)

         GGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATA                                                                                      >  SRR4302543.3724825/1‑94 (MQ=60)

         GGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATA                                                                                      >  SRR4302543.6328997/1‑94 (MQ=60)

         GGGGTTCCCGCAGAGCATGGGGGAGGTTAACGATATGTTGTACGATAAATCCCTTTAGAGGGATAACTGTGGGTTCGGCCTGATTGCCCACATA                                                                                      >  SRR4302543.3975330/1‑94 (MQ=60)

          GGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAG                                                                                     <  SRR4302543.7271916/94‑1 (MQ=60)

          GGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAG                                                                                     >  SRR4302543.5169729/1‑94 (MQ=60)

          GGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAG                                                                                     >  SRR4302543.430019/1‑94 (MQ=60)

          GGGTTACCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAG                                                                                     >  SRR4302543.6012268/1‑94 (MQ=60)

           GGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGA                                                                                    <  SRR4302543.4601250/94‑1 (MQ=60)

            GTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAA                                                                                   <  SRR4302543.3337332/94‑1 (MQ=60)

            GTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAA                                                                                   >  SRR4302543.5642677/1‑94 (MQ=60)

             TTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAG                                                                                  <  SRR4302543.6528385/94‑1 (MQ=60)

             TTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAG                                                                                  >  SRR4302543.2187505/1‑94 (MQ=60)

             TTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAG                                                                                  <  SRR4302543.762446/94‑1 (MQ=60)

             TTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAG                                                                                  <  SRR4302543.7335429/94‑1 (MQ=60)

              TCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGG                                                                                 <  SRR4302543.4119522/94‑1 (MQ=60)

               CCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGC                                                                                <  SRR4302543.6404407/94‑1 (MQ=60)

                CCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCG                                                                               <  SRR4302543.7046271/94‑1 (MQ=60)

                CCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCG                                                                               <  SRR4302543.5718275/94‑1 (MQ=60)

                 CGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGA                                                                              >  SRR4302543.7724548/1‑94 (MQ=60)

                  GCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAA                                                                             >  SRR4302543.3788006/1‑94 (MQ=60)

                  GCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAA                                                                             <  SRR4302543.3732336/94‑1 (MQ=60)

                  GCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGACAGGGCTAACTGTGGGTTCGGCCTGGTTGCCCACATACAAGGCGAC                                                                             >  SRR4302543.97375/1‑94 (MQ=60)

                   CAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAC                                                                            >  SRR4302543.1744536/1‑94 (MQ=60)

                    AGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACC                                                                           >  SRR4302543.2347325/1‑94 (MQ=60)

                    AGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACC                                                                           >  SRR4302543.5279720/1‑94 (MQ=60)

                    AGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACC                                                                           >  SRR4302543.3928833/1‑94 (MQ=60)

                    AGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACC                                                                           >  SRR4302543.4127078/1‑94 (MQ=60)

                    AGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACC                                                                           <  SRR4302543.199207/94‑1 (MQ=60)

                     GAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCT                                                                          <  SRR4302543.6333282/94‑1 (MQ=60)

                      AGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTA                                                                         <  SRR4302543.1296810/94‑1 (MQ=60)

                        CCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGC                                                                       >  SRR4302543.4538237/1‑94 (MQ=60)

                        CCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTAGGCCTGATTGCCCACATAGAAGGCGAACCTAGC                                                                       >  SRR4302543.1405064/1‑94 (MQ=60)

                         CTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCC                                                                      >  SRR4302543.4290432/1‑94 (MQ=60)

                           GGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGGGAACCTAGCCAC                                                                    >  SRR4302543.3544054/1‑94 (MQ=60)

                           GGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCAC                                                                    >  SRR4302543.4515181/1‑94 (MQ=60)

                            GGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACA                                                                   >  SRR4302543.5068153/1‑94 (MQ=60)

                            GGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACA                                                                   >  SRR4302543.2944306/1‑94 (MQ=60)

                            GGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACA                                                                   >  SRR4302543.7594426/1‑94 (MQ=60)

                             GGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAA                                                                  <  SRR4302543.7540607/94‑1 (MQ=60)

                              GGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAG                                                                 <  SRR4302543.4155891/94‑1 (MQ=60)

                              GGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAG                                                                 <  SRR4302543.3873713/94‑1 (MQ=60)

                              GGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAG                                                                 <  SRR4302543.6280007/94‑1 (MQ=60)

                               GAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGG                                                                <  SRR4302543.3736411/94‑1 (MQ=60)

                                AGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGT                                                               <  SRR4302543.4561845/94‑1 (MQ=60)

                                AGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTAGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGT                                                               >  SRR4302543.1109587/1‑94 (MQ=60)

                                 GGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTA                                                              >  SRR4302543.5178956/1‑94 (MQ=60)

                                  GTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAG                                                             >  SRR4302543.3648437/1‑94 (MQ=60)

                                  GTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAG                                                             <  SRR4302543.3580578/94‑1 (MQ=60)

                                  GTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAG                                                             >  SRR4302543.4951101/1‑94 (MQ=60)

                                   TTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGT                                                            <  SRR4302543.3386636/94‑1 (MQ=60)

                                      ACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCG                                                         <  SRR4302543.3494976/94‑1 (MQ=60)

                                       CGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGT                                                        >  SRR4302543.128958/1‑94 (MQ=60)

                                        GATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTA                                                       >  SRR4302543.6132200/1‑94 (MQ=60)

                                         ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC                                                      >  SRR4302543.1043370/1‑94 (MQ=60)

                                         ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC                                                      >  SRR4302543.5269636/1‑94 (MQ=60)

                                         ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC                                                      >  SRR4302543.399411/1‑94 (MQ=60)

                                         ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC                                                      >  SRR4302543.5269637/1‑94 (MQ=60)

                                         ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC                                                      <  SRR4302543.7970992/94‑1 (MQ=60)

                                         ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC                                                      <  SRR4302543.7754158/94‑1 (MQ=60)

                                         ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC                                                      >  SRR4302543.3609995/1‑94 (MQ=60)

                                         ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC                                                      <  SRR4302543.3576969/94‑1 (MQ=60)

                                         ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC                                                      >  SRR4302543.3436448/1‑94 (MQ=60)

                                         ATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAC                                                      <  SRR4302543.7064929/94‑1 (MQ=60)

                                          TATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACT                                                     <  SRR4302543.423198/94‑1 (MQ=60)

                                          TATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACT                                                     <  SRR4302543.2567907/94‑1 (MQ=60)

                                           ATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTG                                                    <  SRR4302543.479809/94‑1 (MQ=60)

                                           ATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTG                                                    >  SRR4302543.4329411/1‑94 (MQ=60)

                                           ATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTG                                                    >  SRR4302543.3724209/1‑94 (MQ=60)

                                           ATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTG                                                    <  SRR4302543.3836449/94‑1 (MQ=60)

                                            TGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGC                                                   >  SRR4302543.6724046/1‑94 (MQ=60)

                                            TGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGC                                                   <  SRR4302543.7728284/94‑1 (MQ=60)

                                             GTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCA                                                  >  SRR4302543.7490194/1‑94 (MQ=60)

                                             GTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCA                                                  <  SRR4302543.2112883/94‑1 (MQ=60)

                                               TGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAT                                                <  SRR4302543.6003318/94‑1 (MQ=60)

                                               TGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAT                                                >  SRR4302543.4588195/1‑94 (MQ=60)

                                               TGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAT                                                >  SRR4302543.1378301/1‑94 (MQ=60)

                                               TGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAT                                                <  SRR4302543.3028813/94‑1 (MQ=60)

                                                GTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATA                                               <  SRR4302543.6926783/94‑1 (MQ=60)

                                                 TACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATAC                                              >  SRR4302543.6376548/1‑94 (MQ=60)

                                                  ACTATAAATCTCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCAAACCTAGCCACAAGGTAGTGCGTACTGCAATACA                                             <  SRR4302543.3344767/94‑1 (MQ=60)

                                                  ACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACA                                             >  SRR4302543.5826874/1‑94 (MQ=60)

                                                   CGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACAC                                            <  SRR4302543.5738991/94‑1 (MQ=60)

                                                   CGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACAC                                            >  SRR4302543.3764216/1‑94 (MQ=60)

                                                   CGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACAC                                            >  SRR4302543.5535785/1‑94 (MQ=60)

                                                   CGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACAC                                            <  SRR4302543.5394220/94‑1 (MQ=60)

                                                   CGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACAC                                            >  SRR4302543.2596487/1‑94 (MQ=60)

                                                   CGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACAC                                            >  SRR4302543.1024737/1‑94 (MQ=60)

                                                    GATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACG                                           <  SRR4302543.715814/94‑1 (MQ=60)

                                                    GATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACG                                           <  SRR4302543.7580179/94‑1 (MQ=60)

                                                     ATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGC                                          <  SRR4302543.7634676/94‑1 (MQ=60)

                                                     ATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGC                                          <  SRR4302543.7634677/94‑1 (MQ=60)

                                                      TAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCA                                         >  SRR4302543.6458926/1‑94 (MQ=60)

                                                      TAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCA                                         >  SRR4302543.1922021/1‑94 (MQ=60)

                                                      TAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCA                                         <  SRR4302543.803223/94‑1 (MQ=60)

                                                       AAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAC                                        >  SRR4302543.2164410/1‑94 (MQ=60)

                                                       AAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAC                                        >  SRR4302543.5780165/1‑94 (MQ=60)

                                                       AAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAC                                        >  SRR4302543.4633415/1‑94 (MQ=60)

                                                       AAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAC                                        >  SRR4302543.3814315/1‑94 (MQ=60)

                                                        AATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACT                                       >  SRR4302543.59304/1‑94 (MQ=60)

                                                        AATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACT                                       <  SRR4302543.4111658/94‑1 (MQ=60)

                                                        AATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACT                                       <  SRR4302543.3634827/94‑1 (MQ=60)

                                                        AATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACT                                       >  SRR4302543.6313060/1‑94 (MQ=60)

                                                        AATCCCTTGAGAGGGATAACTGTGGTTTCGGCCCGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACT                                       <  SRR4302543.2448195/94‑1 (MQ=60)

                                                         ATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGACGGCGAACCTAGCCACAAGGTCGTGCGTACTACAATACACGCCCTG                                      >  SRR4302543.4047381/1‑94 (MQ=60)

                                                         ATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTG                                      >  SRR4302543.182743/1‑94 (MQ=60)

                                                         ATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTG                                      >  SRR4302543.4047384/1‑94 (MQ=60)

                                                         ATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTG                                      >  SRR4302543.336765/1‑94 (MQ=60)

                                                         ATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTG                                      >  SRR4302543.5216036/1‑94 (MQ=60)

                                                          TCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGG                                     <  SRR4302543.4386182/94‑1 (MQ=60)

                                                          TCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGG                                     >  SRR4302543.1069746/1‑94 (MQ=60)

                                                           CCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGC                                    <  SRR4302543.4339622/94‑1 (MQ=60)

                                                            CCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAGCCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCC                                   <  SRR4302543.7764613/94‑1 (MQ=60)

                                                            CCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCC                                   <  SRR4302543.7764612/94‑1 (MQ=60)

                                                              TTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCG                                 <  SRR4302543.3013601/94‑1 (MQ=60)

                                                              TTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCG                                 <  SRR4302543.3936106/94‑1 (MQ=60)

                                                                GAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCA                               >  SRR4302543.3462581/1‑94 (MQ=60)

                                                                  GAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATG                             >  SRR4302543.2143340/1‑94 (MQ=60)

                                                                   AGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGC                            >  SRR4302543.7318981/1‑94 (MQ=60)

                                                                      GATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGC                         >  SRR4302543.4123837/1‑94 (MQ=60)

                                                                       ATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCA                        >  SRR4302543.1714164/1‑94 (MQ=60)

                                                                       ATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCA                        >  SRR4302543.2585240/1‑94 (MQ=60)

                                                                        TAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCAC                       <  SRR4302543.612132/94‑1 (MQ=60)

                                                                         AACTGTGGTTTCGGCCTGATGGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACC                      <  SRR4302543.7717253/94‑1 (MQ=60)

                                                                           CTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGT                    >  SRR4302543.902638/1‑94 (MQ=60)

                                                                           CTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGT                    >  SRR4302543.1976830/1‑94 (MQ=60)

                                                                           CTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGT                    >  SRR4302543.6435263/1‑94 (MQ=60)

                                                                           CTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACCGCAATACACGCACTGGCCCGCATGCAGCACCGT                    >  SRR4302543.7722926/1‑94 (MQ=60)

                                                                            TGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTG                   <  SRR4302543.1819790/94‑1 (MQ=60)

                                                                            TGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTG                   <  SRR4302543.3251783/94‑1 (MQ=60)

                                                                            TGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTG                   <  SRR4302543.5981036/94‑1 (MQ=60)

                                                                            TGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTG                   <  SRR4302543.4526675/94‑1 (MQ=60)

                                                                            TGTGGTTCCGGCCTGATTGCCCACATAGAAGGCTAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTG                   <  SRR4302543.3251782/94‑1 (MQ=60)

                                                                              TGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGC                 <  SRR4302543.5582891/94‑1 (MQ=60)

                                                                              TGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGC                 <  SRR4302543.2317046/94‑1 (MQ=60)

                                                                              TGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGC                 <  SRR4302543.7509151/94‑1 (MQ=60)

                                                                                GTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGC               >  SRR4302543.7174233/1‑94 (MQ=60)

                                                                                 TTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCG              <  SRR4302543.5463871/94‑1 (MQ=60)

                                                                                   TCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAT            <  SRR4302543.5695463/94‑1 (MQ=60)

                                                                                    CGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATT           <  SRR4302543.7245724/94‑1 (MQ=60)

                                                                                    CGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATT           <  SRR4302543.7133790/94‑1 (MQ=60)

                                                                                     GGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAGTACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTC          >  SRR4302543.7832527/1‑94 (MQ=60)

                                                                                     GGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTC          >  SRR4302543.7708734/1‑94 (MQ=60)

                                                                                     GGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTC          >  SRR4302543.4882702/1‑94 (MQ=60)

                                                                                     GGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTC          >  SRR4302543.7566784/1‑94 (MQ=60)

                                                                                     GGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACCGGCCCGCATGAAGCACCGTGGCGCGATTC          >  SRR4302543.4882701/1‑94 (MQ=60)

                                                                                      GCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCT         <  SRR4302543.798033/94‑1 (MQ=60)

                                                                                      GCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGATAGTGCGTACTGCAATACACGCCCTGGCCCGCATGCAGCACCGTGGGGCGATTCT         >  SRR4302543.6088517/1‑94 (MQ=60)

                                                                                       CCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTC        <  SRR4302543.5402050/94‑1 (MQ=60)

                                                                                       CCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTC        >  SRR4302543.591134/1‑94 (MQ=60)

                                                                                        CTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCG       >  SRR4302543.4738189/1‑94 (MQ=60)

                                                                                        CTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCG       <  SRR4302543.975088/94‑1 (MQ=60)

                                                                                          GATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCC     <  SRR4302543.323673/94‑1 (MQ=60)

                                                                                             TGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCGAT  <  SRR4302543.2896995/94‑1 (MQ=60)

TTCGGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCGAT  >  NC_000913/3352317‑3352503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`