Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,374,263 T→C Q50R (CAA→CGA)  sspB ← stringent starvation protein B

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,374,2630TC99.7% 990.6 / ‑5.4 313Q50R (CAA→CGA) sspBstringent starvation protein B
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (171/140);  total (171/142)
Fisher's exact test for biased strand distribution p-value = 4.52e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.00e-01

Only 100 of 329 total aligned reads displayed.

GGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAAC  >  NC_000913/3374173‑3374352
                                                                                          |                                                                                         
ggAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGc                                                                                         >  1:3846632/1‑93 (MQ=255)
ggAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGc                                                                                         >  2:4893941/1‑93 (MQ=255)
       caccaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAc                                                                                  >  1:6546561/1‑93 (MQ=255)
       caccaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAc                                                                                  >  2:1044653/1‑93 (MQ=255)
       caccaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAc                                                                                  >  2:1107015/1‑93 (MQ=255)
        cccaAAGCGCGCGTTAAAGCGCATCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAcg                                                                                 <  2:4295485/92‑1 (MQ=255)
        accaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAcg                                                                                 >  1:3873631/1‑93 (MQ=255)
        accaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAcg                                                                                 <  1:2393413/93‑1 (MQ=255)
         ccaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAcgc                                                                                <  2:6926370/93‑1 (MQ=255)
           aaaGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACgcgc                                                                              >  2:7693769/1‑93 (MQ=255)
           aaaGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACgcgc                                                                              >  2:465298/1‑93 (MQ=255)
           aaaGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACgcgc                                                                              <  2:5519467/93‑1 (MQ=255)
              gcgcgcGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCata                                                                           <  2:1997120/93‑1 (MQ=255)
              gcgcgcGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCata                                                                           <  1:4320598/93‑1 (MQ=255)
               cgcgcgTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCatat                                                                          <  2:1375087/93‑1 (MQ=255)
                 cgcgTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTc                                                                        <  2:6224857/93‑1 (MQ=255)
                 cgcgTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTc                                                                        <  1:109070/93‑1 (MQ=255)
                  gcgTTAGAGCGCACCCCACCTTTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCACTGTTGAGTACGATTCCCCCGTCACGCGCATATTcc                                                                       <  2:6606317/93‑1 (MQ=255)
                  gcgTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTcc                                                                       <  2:2679116/93‑1 (MQ=255)
                    gTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCAt                                                                     <  1:2793433/93‑1 (MQ=255)
                    gTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCAt                                                                     >  2:1552385/1‑93 (MQ=255)
                     ttAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATa                                                                    <  1:7838008/93‑1 (MQ=255)
                          gcgcACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAAc                                                               <  2:5617598/93‑1 (MQ=255)
                          gcccACCTTATCATTCACCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTAGGATTCGCCCGTCACGCGCATATTCCATAGGAAc                                                               <  2:2311826/90‑1 (MQ=255)
                             cACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTg                                                            >  1:6256419/1‑93 (MQ=255)
                               ccTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGACCCTGCa                                                          <  2:4154905/93‑1 (MQ=255)
                                cTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCAc                                                         >  1:5308505/1‑93 (MQ=255)
                                 tcatcaTTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACg                                                        >  1:7897276/1‑93 (MQ=255)
                                   atcatTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGcc                                                      >  1:6178944/1‑93 (MQ=255)
                                   atcatTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGcc                                                      >  2:916058/1‑93 (MQ=255)
                                    tcatTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCa                                                     >  2:7234455/1‑93 (MQ=255)
                                    tcatTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCa                                                     >  2:7216538/1‑93 (MQ=255)
                                    tcatTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCa                                                     >  1:5790603/1‑93 (MQ=255)
                                    tcatTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCa                                                     >  1:4957034/1‑93 (MQ=255)
                                     catTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAg                                                    <  1:6423858/93‑1 (MQ=255)
                                      atTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAgg                                                   >  1:4095892/1‑93 (MQ=255)
                                         cGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAg                                                <  1:1784362/93‑1 (MQ=255)
                                         cGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAg                                                >  2:5203042/1‑93 (MQ=255)
                                         cGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAg                                                <  2:4060884/93‑1 (MQ=255)
                                          gCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGc                                               >  1:2216097/1‑93 (MQ=255)
                                          gCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGc                                               <  1:5993433/93‑1 (MQ=255)
                                           ccAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCATGCCAGGGAGCg                                              >  2:5780960/1‑93 (MQ=255)
                                             atgtCCATATTGCCAACGGCACGCGGAGAATTGTTGAGTACGATTCGACCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTc                                            <  2:4478369/90‑1 (MQ=255)
                                             aGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTc                                            >  1:757234/1‑93 (MQ=255)
                                             aGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTc                                            <  1:1940535/93‑1 (MQ=255)
                                              gTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTca                                           >  1:4843714/1‑93 (MQ=255)
                                              gTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTca                                           >  1:2097314/1‑93 (MQ=255)
                                               ttCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTcac                                          >  1:4059881/1‑93 (MQ=255)
                                                   aGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATcc                                      <  1:6481838/93‑1 (MQ=255)
                                                   aGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATcc                                      <  2:7867247/93‑1 (MQ=255)
                                                   aGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATcc                                      >  1:7615277/1‑93 (MQ=255)
                                                    gATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccc                                     >  2:6051063/1‑92 (MQ=255)
                                                    gATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATcca                                     >  2:1219654/1‑93 (MQ=255)
                                                    gATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATcca                                     >  2:3057272/1‑93 (MQ=255)
                                                    gATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATcca                                     >  2:3293637/1‑93 (MQ=255)
                                                    gATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATcca                                     >  2:1731203/1‑93 (MQ=255)
                                                    gATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATcca                                     >  1:7143821/1‑93 (MQ=255)
                                                     aTTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccac                                    >  2:3457280/1‑93 (MQ=255)
                                                     aTTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccac                                    <  2:2244014/93‑1 (MQ=255)
                                                        gCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccaccac                                 <  2:1287829/93‑1 (MQ=255)
                                                         ccGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccaccacc                                <  1:3629856/93‑1 (MQ=255)
                                                         ccGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccaccacc                                <  1:3430716/93‑1 (MQ=255)
                                                          cGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccaccacca                               <  2:6297407/93‑1 (MQ=255)
                                                            aCAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCAGATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAgg                             <  1:4210749/93‑1 (MQ=255)
                                                             cAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGt                            <  2:6589928/93‑1 (MQ=255)
                                                             cAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGt                            <  1:1517199/93‑1 (MQ=255)
                                                             cAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGt                            <  1:3123345/93‑1 (MQ=255)
                                                             cAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGt                            <  1:4578807/93‑1 (MQ=255)
                                                              aGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTg                           >  1:1721515/1‑93 (MQ=255)
                                                               gCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTgc                          >  2:4782508/1‑93 (MQ=255)
                                                               gCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTgc                          <  1:4641689/93‑1 (MQ=255)
                                                                  cgcgCCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTgcggc                       <  1:3949269/93‑1 (MQ=255)
                                                                      gcgcAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGa                   <  1:1162504/93‑1 (MQ=255)
                                                                      gcgcAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGa                   <  2:3830735/93‑1 (MQ=255)
                                                                       cgcAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAg                  <  2:5410487/93‑1 (MQ=255)
                                                                        gcAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGc                 <  2:7455324/93‑1 (MQ=255)
                                                                        gcAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGc                 >  2:933489/1‑93 (MQ=255)
                                                                         cAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCt                >  1:1233899/1‑93 (MQ=255)
                                                                          aaTGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTg               >  2:5745278/1‑93 (MQ=255)
                                                                          aaTGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTg               <  1:7371266/93‑1 (MQ=255)
                                                                           aTGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTgg              >  1:325604/1‑93 (MQ=255)
                                                                           aTGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTgg              >  2:7329315/1‑93 (MQ=255)
                                                                            tGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGt             >  2:6479290/1‑93 (MQ=255)
                                                                            tGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGt             >  1:1027980/1‑93 (MQ=255)
                                                                            tGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGt             <  1:3787443/93‑1 (MQ=255)
                                                                            tGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGt             >  2:5478097/1‑93 (MQ=255)
                                                                            tGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGt             >  1:2912271/1‑93 (MQ=255)
                                                                            tGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGt             <  1:6888732/93‑1 (MQ=255)
                                                                            tGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGt             <  1:5181892/93‑1 (MQ=255)
                                                                              ttGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTa           <  1:742947/93‑1 (MQ=255)
                                                                                gAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATc         <  2:6188625/93‑1 (MQ=255)
                                                                                 aGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATcc        <  1:951619/93‑1 (MQ=255)
                                                                                  gTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCa       <  2:3681228/93‑1 (MQ=255)
                                                                                  gTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCa       >  2:1929175/1‑93 (MQ=255)
                                                                                  gTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCa       >  2:187226/1‑93 (MQ=255)
                                                                                   tACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACACCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAg      >  2:3870711/1‑93 (MQ=255)
                                                                                     cGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCa    >  1:7282157/1‑93 (MQ=255)
                                                                                     cGATTCGCCCGTCACGCGCATAGTCCATAGGAACCTGCACGCCAGGGAGCGTCACATTCACCACCAGGTGCGGCGTGAGCTGGGTATCCATCa    >  2:7037393/1‑93 (MQ=255)
                                                                                      gATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCaa   >  1:56794/1‑93 (MQ=255)
                                                                                       aTTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAAc  >  1:3527457/1‑93 (MQ=255)
                                                                                          |                                                                                         
GGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAAC  >  NC_000913/3374173‑3374352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAACCACT  >  NC_000913/3374170‑3374356
                                                                                             |                                                                                             
CGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTC                                                                                               <  SRR4302543.6716138/94‑1 (MQ=60)
 GCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCG                                                                                              <  SRR4302543.7822951/94‑1 (MQ=60)
 GCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCG                                                                                              <  SRR4302543.7867829/94‑1 (MQ=60)
  CGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGC                                                                                             >  SRR4302543.3880610/1‑94 (MQ=60)
   GGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCC                                                                                            >  SRR4302543.5483965/1‑94 (MQ=60)
    GAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTAGAGAACGATTCGCCC                                                                                           >  SRR4302543.6090927/1‑94 (MQ=60)
     AATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCG                                                                                          <  SRR4302543.6292394/94‑1 (MQ=60)
      ATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGT                                                                                         >  SRR4302543.1078340/1‑94 (MQ=60)
      ATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTAGCCCGT                                                                                         <  SRR4302543.5909936/94‑1 (MQ=60)
        GCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCA                                                                                       >  SRR4302543.6584825/1‑94 (MQ=60)
         CCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAC                                                                                      <  SRR4302543.982198/94‑1 (MQ=60)
         CCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAC                                                                                      >  SRR4302543.3508410/1‑94 (MQ=60)
         CCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAC                                                                                      >  SRR4302543.6608178/1‑94 (MQ=60)
          CACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACG                                                                                     >  SRR4302543.3907831/1‑94 (MQ=60)
          CACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACC                                                                                     >  SRR4302543.299940/1‑94 (MQ=60)
           ACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGC                                                                                    >  SRR4302543.6318902/1‑94 (MQ=60)
           ACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGC                                                                                    <  SRR4302543.2415068/94‑1 (MQ=60)
            CCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCG                                                                                   >  SRR4302543.7300020/1‑94 (MQ=60)
            CCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCG                                                                                   <  SRR4302543.6612973/94‑1 (MQ=60)
               AAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCAT                                                                                >  SRR4302543.4096296/1‑94 (MQ=60)
               AAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCAAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCcagt                                                                                >  SRR4302543.7613112/1‑90 (MQ=60)
                 GCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATAT                                                                              <  SRR4302543.4359829/94‑1 (MQ=60)
                 GCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATAT                                                                              <  SRR4302543.1749395/94‑1 (MQ=60)
                 GCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATAT                                                                              >  SRR4302543.1043236/1‑94 (MQ=60)
                  CGCGCGTTAAAGCGCACCTCATCATTCGCCAGTGCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATT                                                                             <  SRR4302543.7677056/94‑1 (MQ=60)
                   GCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTC                                                                            <  SRR4302543.294061/94‑1 (MQ=60)
                    CGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCC                                                                           <  SRR4302543.110067/94‑1 (MQ=60)
                    CGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCC                                                                           >  SRR4302543.6592708/1‑94 (MQ=60)
                    CGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCC                                                                           >  SRR4302543.5236753/1‑94 (MQ=60)
                     GCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCA                                                                          <  SRR4302543.7471909/94‑1 (MQ=60)
                      CGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCAT                                                                         <  SRR4302543.2246223/94‑1 (MQ=60)
                      CGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCAT                                                                         >  SRR4302543.2167448/1‑94 (MQ=60)
                       GTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATA                                                                        <  SRR4302543.2415422/94‑1 (MQ=60)
                       GTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATA                                                                        <  SRR4302543.7936198/94‑1 (MQ=60)
                       GTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATA                                                                        <  SRR4302543.2818956/94‑1 (MQ=60)
                       GTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATA                                                                        <  SRR4302543.3855995/94‑1 (MQ=60)
                       GTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATA                                                                        >  SRR4302543.7465412/1‑94 (MQ=60)
                        TTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAG                                                                       <  SRR4302543.7911776/94‑1 (MQ=60)
                        TTAAAGCGCACCTCATCATTCGCCAGTTCCAGAGTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAG                                                                       <  SRR4302543.7679188/94‑1 (MQ=60)
                        GTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAG                                                                       <  SRR4302543.3719946/94‑1 (MQ=60)
                           AAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAA                                                                    >  SRR4302543.1138946/1‑94 (MQ=60)
                            AGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAAC                                                                   >  SRR4302543.7301721/1‑94 (MQ=60)
                              CGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCT                                                                 <  SRR4302543.7870315/94‑1 (MQ=60)
                              CGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCT                                                                 >  SRR4302543.3903712/1‑94 (MQ=60)
                               GCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTG                                                                <  SRR4302543.1893291/94‑1 (MQ=60)
                               GCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTG                                                                >  SRR4302543.6315434/1‑94 (MQ=60)
                               GCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTG                                                                >  SRR4302543.404277/1‑94 (MQ=60)
                               GCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTG                                                                <  SRR4302543.470467/94‑1 (MQ=60)
                                CACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGC                                                               <  SRR4302543.856614/94‑1 (MQ=60)
                                 ACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCA                                                              <  SRR4302543.3905453/94‑1 (MQ=60)
                                  CCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCAC                                                             <  SRR4302543.7313354/94‑1 (MQ=60)
                                  CCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCAC                                                             >  SRR4302543.5356450/1‑94 (MQ=60)
                                  CCTCATCATTCGCCAGTGCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCAC                                                             <  SRR4302543.4887726/94‑1 (MQ=60)
                                   CTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACG                                                            >  SRR4302543.5875571/1‑94 (MQ=60)
                                   CTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACG                                                            >  SRR4302543.5449829/1‑94 (MQ=60)
                                   CTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACG                                                            >  SRR4302543.2015735/1‑94 (MQ=60)
                                   CTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACG                                                            >  SRR4302543.5734287/1‑94 (MQ=60)
                                   CTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACG                                                            >  SRR4302543.7971523/1‑94 (MQ=60)
                                   CTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACG                                                            >  SRR4302543.4693860/1‑94 (MQ=60)
                                     CATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCC                                                          >  SRR4302543.6237356/1‑94 (MQ=60)
                                      ATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCA                                                         >  SRR4302543.5843288/1‑94 (MQ=60)
                                      ATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCA                                                         >  SRR4302543.621322/1‑94 (MQ=60)
                                      ATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCA                                                         >  SRR4302543.6266751/1‑94 (MQ=60)
                                      ATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCA                                                         >  SRR4302543.5002164/1‑94 (MQ=60)
                                      ATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCA                                                         >  SRR4302543.1889452/1‑94 (MQ=60)
                                        CATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCCCGCCAGG                                                       >  SRR4302543.2215547/1‑94 (MQ=60)
                                        CATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGG                                                       <  SRR4302543.1740064/94‑1 (MQ=60)
                                        CATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGG                                                       >  SRR4302543.4245439/1‑94 (MQ=60)
                                        CATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGG                                                       >  SRR4302543.4132661/1‑94 (MQ=60)
                                        CATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGG                                                       >  SRR4302543.1524224/1‑94 (MQ=60)
                                        CATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGG                                                       >  SRR4302543.5823158/1‑94 (MQ=60)
                                        CATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGG                                                       <  SRR4302543.6484387/94‑1 (MQ=60)
                                        CATTCGCCAGCTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGG                                                       <  SRR4302543.6484391/94‑1 (MQ=60)
                                         ATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGG                                                      >  SRR4302543.7997649/1‑94 (MQ=60)
                                         ATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGG                                                      <  SRR4302543.4107673/94‑1 (MQ=60)
                                         ATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCAATAGGAACCTGCACGCCAGGG                                                      >  SRR4302543.1734101/1‑94 (MQ=60)
                                          TTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGA                                                     >  SRR4302543.2829076/1‑94 (MQ=60)
                                           TCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAG                                                    >  SRR4302543.3916587/1‑94 (MQ=60)
                                           TCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAG                                                    <  SRR4302543.6508713/94‑1 (MQ=60)
                                           TCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAG                                                    <  SRR4302543.6508711/94‑1 (MQ=60)
                                            CGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGC                                                   >  SRR4302543.4377892/1‑94 (MQ=60)
                                            CGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGC                                                   >  SRR4302543.2236075/1‑94 (MQ=60)
                                            CGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGC                                                   <  SRR4302543.1800317/94‑1 (MQ=60)
                                             GCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCG                                                  <  SRR4302543.6048370/94‑1 (MQ=60)
                                             GCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCG                                                  >  SRR4302543.6899539/1‑94 (MQ=60)
                                             GCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCG                                                  <  SRR4302543.4630860/94‑1 (MQ=60)
                                              CCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCTAGGGAGCGT                                                 >  SRR4302543.3834336/1‑94 (MQ=60)
                                               CAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTC                                                >  SRR4302543.763924/1‑94 (MQ=60)
                                                AGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCA                                               >  SRR4302543.2116063/1‑94 (MQ=60)
                                                AGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCA                                               <  SRR4302543.1957967/94‑1 (MQ=60)
                                                AGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCA                                               >  SRR4302543.4887878/1‑94 (MQ=60)
                                                 GTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCAC                                              >  SRR4302543.4096237/1‑94 (MQ=60)
                                                 GTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCAC                                              >  SRR4302543.5150454/1‑94 (MQ=60)
                                                  TTCCAGATTGCAGACAGCAAGCAGCGCAATGTTGAGCACGATACGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGAAGCGTCACA                                             <  SRR4302543.4255853/94‑1 (MQ=60)
                                                    CCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATC                                           <  SRR4302543.1164979/94‑1 (MQ=60)
                                                     CAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCC                                          <  SRR4302543.3969425/94‑1 (MQ=60)
                                                     CAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCC                                          >  SRR4302543.7687574/1‑94 (MQ=60)
                                                      AGATTGCCGACAGCACGCGGCGTAATGTGGAGGACGATTCGCCCGTCACGCGCATATTCCATATGAACCTGCACGCCAGGGAGAGTCACATCCA                                         >  SRR4302543.4970333/1‑94 (MQ=60)
                                                      AGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCATGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCA                                         >  SRR4302543.3817083/1‑94 (MQ=60)
                                                      AGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCA                                         >  SRR4302543.4970334/1‑94 (MQ=60)
                                                      AGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCA                                         >  SRR4302543.7213239/1‑94 (MQ=60)
                                                      AGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCA                                         <  SRR4302543.6542910/94‑1 (MQ=60)
                                                        ATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACC                                       >  SRR4302543.3475915/1‑94 (MQ=60)
                                                        ATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACC                                       <  SRR4302543.3278122/94‑1 (MQ=60)
                                                           GCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACC                                    >  SRR4302543.7531782/1‑94 (MQ=60)
                                                            CCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCA                                   <  SRR4302543.3461414/94‑1 (MQ=60)
                                                            CCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCA                                   <  SRR4302543.3461413/94‑1 (MQ=60)
                                                            CCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCA                                   <  SRR4302543.3661816/94‑1 (MQ=60)
                                                             CGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAG                                  <  SRR4302543.4906469/94‑1 (MQ=60)
                                                             CGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAG                                  >  SRR4302543.262339/1‑94 (MQ=60)
                                                              GACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGG                                 <  SRR4302543.5276225/94‑1 (MQ=60)
                                                               ACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGT                                <  SRR4302543.1003215/94‑1 (MQ=60)
                                                               ACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGT                                <  SRR4302543.6984682/94‑1 (MQ=60)
                                                               ACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCAGATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGT                                <  SRR4302543.4248925/94‑1 (MQ=60)
                                                                CAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTG                               <  SRR4302543.1584348/94‑1 (MQ=60)
                                                                CAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTG                               <  SRR4302543.1530824/94‑1 (MQ=60)
                                                                CAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTG                               >  SRR4302543.1736872/1‑94 (MQ=60)
                                                                CAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTG                               <  SRR4302543.3151436/94‑1 (MQ=60)
                                                                CAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTG                               <  SRR4302543.4620425/94‑1 (MQ=60)
                                                                  GCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCG                             <  SRR4302543.7556584/94‑1 (MQ=60)
                                                                  GCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCG                             <  SRR4302543.4683914/94‑1 (MQ=60)
                                                                    CCGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGC                           <  SRR4302543.3191844/94‑1 (MQ=60)
                                                                    ACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGC                           >  SRR4302543.4034816/1‑94 (MQ=60)
                                                                    ACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGC                           <  SRR4302543.3191845/94‑1 (MQ=60)
                                                                     CGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCG                          <  SRR4302543.3812934/94‑1 (MQ=60)
                                                                     CGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCG                          <  SRR4302543.4233851/94‑1 (MQ=60)
                                                                     CGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCG                          >  SRR4302543.7980632/1‑94 (MQ=60)
                                                                     CGCGCCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCG                          <  SRR4302543.3984195/94‑1 (MQ=60)
                                                                      GCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGT                         <  SRR4302543.4651784/94‑1 (MQ=60)
                                                                        GGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGA                       <  SRR4302543.3655720/94‑1 (MQ=60)
                                                                         GCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAG                      <  SRR4302543.2381062/94‑1 (MQ=60)
                                                                         GCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAG                      <  SRR4302543.1173088/94‑1 (MQ=60)
                                                                         GCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAG                      >  SRR4302543.3595304/1‑94 (MQ=60)
                                                                          CGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGC                     >  SRR4302543.2832739/1‑94 (MQ=60)
                                                                          CGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGC                     >  SRR4302543.128415/1‑94 (MQ=60)
                                                                          CGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGC                     >  SRR4302543.3916632/1‑94 (MQ=60)
                                                                          CGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGCGAGC                     >  SRR4302543.1226126/1‑94 (MQ=60)
                                                                           GCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCT                    <  SRR4302543.5170373/94‑1 (MQ=60)
                                                                           GCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCT                    >  SRR4302543.1245012/1‑94 (MQ=60)
                                                                            CAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTG                   >  SRR4302543.2477207/1‑94 (MQ=60)
                                                                            CAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTG                   >  SRR4302543.6954191/1‑94 (MQ=60)
                                                                            CAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTG                   >  SRR4302543.1920592/1‑94 (MQ=60)
                                                                             AATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGG                  <  SRR4302543.2006701/94‑1 (MQ=60)
                                                                             AATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGG                  >  SRR4302543.328552/1‑94 (MQ=60)
                                                                             AATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGG                  >  SRR4302543.446458/1‑94 (MQ=60)
                                                                             AATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGG                  <  SRR4302543.7442138/94‑1 (MQ=60)
                                                                              ATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGT                 <  SRR4302543.7861163/94‑1 (MQ=60)
                                                                              ATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGT                 <  SRR4302543.1203876/94‑1 (MQ=60)
                                                                              ATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGT                 <  SRR4302543.7941178/94‑1 (MQ=60)
                                                                              ATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGT                 >  SRR4302543.1037088/1‑94 (MQ=60)
                                                                              ATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGT                 >  SRR4302543.2938738/1‑94 (MQ=60)
                                                                               TGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTT                <  SRR4302543.5228656/94‑1 (MQ=60)
                                                                               TGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTT                <  SRR4302543.6953516/94‑1 (MQ=60)
                                                                               TGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTT                >  SRR4302543.542144/1‑94 (MQ=60)
                                                                               TGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTT                <  SRR4302543.3820810/94‑1 (MQ=60)
                                                                                 TTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTAT              <  SRR4302543.749568/94‑1 (MQ=60)
                                                                                   GAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCC            <  SRR4302543.3391920/94‑1 (MQ=60)
                                                                                    AGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCA           <  SRR4302543.4307381/94‑1 (MQ=60)
                                                                                    AGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCA           >  SRR4302543.434964/1‑94 (MQ=60)
                                                                                    AGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCA           <  SRR4302543.959933/94‑1 (MQ=60)
                                                                                    AGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCA           >  SRR4302543.6437263/1‑94 (MQ=60)
                                                                                     GTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAG          <  SRR4302543.1258269/94‑1 (MQ=60)
                                                                                      TACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGC         <  SRR4302543.6195272/94‑1 (MQ=60)
                                                                                       ACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCA        >  SRR4302543.7352480/1‑94 (MQ=60)
                                                                                       ACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCA        >  SRR4302543.7352481/1‑94 (MQ=60)
                                                                                        CGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAA       >  SRR4302543.7394010/1‑94 (MQ=60)
                                                                                        CGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAA       >  SRR4302543.57294/1‑94 (MQ=60)
                                                                                         GATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAAC      >  SRR4302543.3558896/1‑94 (MQ=60)
                                                                                          ATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAACC     >  SRR4302543.7739852/1‑94 (MQ=60)
                                                                                          ATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAACC     >  SRR4302543.7739851/1‑94 (MQ=60)
                                                                                           TTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAACCC    >  SRR4302543.1801349/1‑94 (MQ=60)
                                                                                             CGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGATCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAACCACT  <  SRR4302543.3080130/94‑1 (MQ=60)
                                                                                             |                                                                                             
CGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAACCACT  >  NC_000913/3374170‑3374356

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑