Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,393,906 T→C intergenic (‑4243/+57) tldD ← / ← cafA TldD/CafA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,393,9060TC99.7% 1009.0 / ‑5.3 320intergenic (‑4243/+57)tldD/cafATldD/CafA
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (145/173);  total (146/174)
Fisher's exact test for biased strand distribution p-value = 4.58e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01

Only 100 of 324 total aligned reads displayed.

CGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCTTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTT  >  NC_000913/3393816‑3393995
                                                                                          |                                                                                         
cGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTg                                                                                         <  1:691471/93‑1 (MQ=255)
  cAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTc                                                                                       <  1:1167750/93‑1 (MQ=255)
  cAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTc                                                                                       <  1:7061855/93‑1 (MQ=255)
   aGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCt                                                                                      <  1:3971467/93‑1 (MQ=255)
    ggCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTg                                                                                     >  2:2726753/1‑93 (MQ=255)
    ggCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCACCGGCAATCGCCTCACCCGTCACTCCCCGTCtc                                                                                     >  1:2877492/1‑92 (MQ=255)
       cGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTa                                                                                  <  2:5502203/93‑1 (MQ=255)
         cTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTaaa                                                                                >  2:6783113/1‑93 (MQ=255)
         cTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTaaa                                                                                >  2:3726886/1‑93 (MQ=255)
           aaCCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTaaaaa                                                                              <  2:1690162/93‑1 (MQ=255)
           aaCCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTaaaaa                                                                              <  1:1861554/93‑1 (MQ=255)
            aCCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAt                                                                             >  1:5240422/1‑93 (MQ=255)
             ccAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAtg                                                                            <  2:1848975/93‑1 (MQ=255)
             ccAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAtg                                                                            >  1:7720843/1‑93 (MQ=255)
               agcagGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAtgtg                                                                          >  1:2657965/1‑93 (MQ=255)
               agcagGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAtgtg                                                                          <  2:4238881/93‑1 (MQ=255)
               agcagGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAtgtg                                                                          >  1:6117940/1‑93 (MQ=255)
               agcagGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAtgtg                                                                          >  1:4348247/1‑93 (MQ=255)
                gcagGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGa                                                                         >  1:7159841/1‑93 (MQ=255)
                  agGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACt                                                                       <  2:2221400/93‑1 (MQ=255)
                  agGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACt                                                                       >  2:7809174/1‑93 (MQ=255)
                  agGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATACCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACt                                                                       >  1:136666/1‑93 (MQ=255)
                    ggCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCa                                                                     <  1:3495944/93‑1 (MQ=255)
                       aGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAACCCCCGGCAATCGCCTCACCCGGCACTCCCTGTCTGCTAAAAATGTGACTCaaaa                                                                  <  2:1067103/93‑1 (MQ=255)
                        gCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCaaaaa                                                                 <  1:2580509/93‑1 (MQ=255)
                        gCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCaaaaa                                                                 <  1:6277952/93‑1 (MQ=255)
                         cGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAAc                                                                <  2:3438378/93‑1 (MQ=255)
                          gATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAAcc                                                               >  2:4761536/1‑93 (MQ=255)
                           aTCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAAccc                                                              <  1:1433953/93‑1 (MQ=255)
                            tCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCt                                                             <  1:4400200/93‑1 (MQ=255)
                            tCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCt                                                             >  1:2005939/1‑93 (MQ=255)
                             cacaACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCtt                                                            <  2:1966665/93‑1 (MQ=255)
                               caACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTg                                                          <  2:7433524/93‑1 (MQ=255)
                                  cGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCg                                                       <  1:7554382/93‑1 (MQ=255)
                                    aGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGa                                                     >  1:6387111/1‑93 (MQ=255)
                                    aGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGa                                                     <  2:1087397/93‑1 (MQ=255)
                                    aGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGa                                                     <  2:3872924/93‑1 (MQ=255)
                                     gcgcGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGAt                                                    <  1:2422406/93‑1 (MQ=255)
                                      cgcgGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATg                                                   >  2:5882554/1‑93 (MQ=255)
                                        cgGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATggc                                                 <  2:2253051/93‑1 (MQ=255)
                                         ggCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATggcg                                                <  1:3651101/93‑1 (MQ=255)
                                          gCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATggcgg                                               <  1:6861184/93‑1 (MQ=255)
                                          gCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATggcgg                                               >  2:7068179/1‑93 (MQ=255)
                                            tCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGcc                                             <  2:7918824/93‑1 (MQ=255)
                                            tCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGcc                                             >  1:671563/1‑93 (MQ=255)
                                              cAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCa                                           >  1:7366106/1‑93 (MQ=255)
                                              cAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCa                                           <  1:4197793/93‑1 (MQ=255)
                                              cAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCa                                           <  1:6678791/93‑1 (MQ=255)
                                               aGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAg                                          >  1:2325605/1‑93 (MQ=255)
                                                gTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGc                                         >  2:237238/1‑93 (MQ=255)
                                                 tAAGCAGTAAAATCCCCGGCAATCGCCTCACACGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCa                                        <  2:3769363/93‑1 (MQ=255)
                                                   aGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATc                                      <  2:7732338/93‑1 (MQ=255)
                                                   aGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATc                                      <  2:3080238/93‑1 (MQ=255)
                                                     cAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTg                                    <  1:2164994/93‑1 (MQ=255)
                                                       gTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGtt                                  >  1:1747310/1‑93 (MQ=255)
                                                       gTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGtt                                  >  2:5226035/1‑93 (MQ=255)
                                                          aaaTCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAc                               <  2:7596291/93‑1 (MQ=255)
                                                           aaTCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAca                              >  1:1022500/1‑93 (MQ=255)
                                                           aaTCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAca                              <  1:6143481/93‑1 (MQ=255)
                                                            acccccGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAACCCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAcat                             <  2:6385506/91‑1 (MQ=255)
                                                            aTCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAcat                             >  1:581955/1‑93 (MQ=255)
                                                             tCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAcatc                            <  2:7396010/93‑1 (MQ=255)
                                                              ccccGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAcatca                           >  2:885539/1‑93 (MQ=255)
                                                              ccccGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAcatca                           >  2:3512035/1‑93 (MQ=255)
                                                               cccGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAcatcat                          <  2:7246191/93‑1 (MQ=255)
                                                               cccGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAcatcat                          >  1:4987703/1‑93 (MQ=255)
                                                                ccGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCAtt                         <  1:6549891/93‑1 (MQ=255)
                                                                ccGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCAtt                         >  2:6009227/1‑93 (MQ=255)
                                                                 cGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTa                        <  1:7464881/93‑1 (MQ=255)
                                                                 cGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTATTTACATCATTa                        <  2:5127715/93‑1 (MQ=255)
                                                                  ggCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTac                       <  2:1320313/93‑1 (MQ=255)
                                                                  ggCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTac                       >  2:4560442/1‑93 (MQ=255)
                                                                  ggCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTac                       <  2:5628423/93‑1 (MQ=255)
                                                                   gCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTacg                      <  1:820316/93‑1 (MQ=255)
                                                                     aaTCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTacgac                    <  1:4383716/93‑1 (MQ=255)
                                                                     aaTCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTacgac                    <  2:3858680/93‑1 (MQ=255)
                                                                     aaTCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTacgac                    <  2:5717447/93‑1 (MQ=255)
                                                                      aTCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAACCCCTTTGCCGGATGGCGGCCCAGCACCTGTTTACATCATTacgacg                   <  2:434894/93‑1 (MQ=255)
                                                                      aTCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTacgacg                   >  2:3193087/1‑93 (MQ=255)
                                                                      aTCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTacgacg                   >  2:6640820/1‑93 (MQ=255)
                                                                       tCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGt                  <  2:2864034/93‑1 (MQ=255)
                                                                         gCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCa                >  1:5587762/1‑93 (MQ=255)
                                                                          ccTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCaa               <  2:6340629/93‑1 (MQ=255)
                                                                          ccTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCaa               >  2:1273865/1‑93 (MQ=255)
                                                                          ccTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCaa               <  1:1311653/93‑1 (MQ=255)
                                                                           cTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCaaa              >  2:4844602/1‑93 (MQ=255)
                                                                           cTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCaaa              >  2:2451237/1‑93 (MQ=255)
                                                                           cTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCaaa              <  1:3347330/93‑1 (MQ=255)
                                                                           cTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCaaa              <  1:2290328/93‑1 (MQ=255)
                                                                            tCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGTCGTCAAAc             <  2:6235719/93‑1 (MQ=255)
                                                                             cACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACt            <  2:6488395/93‑1 (MQ=255)
                                                                             cACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACt            <  1:1685614/93‑1 (MQ=255)
                                                                               cccGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGc          <  1:5105649/93‑1 (MQ=255)
                                                                               cccGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGc          >  2:4149029/1‑93 (MQ=255)
                                                                                    cACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTg     <  2:6965694/93‑1 (MQ=255)
                                                                                    cACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTg     <  1:591786/93‑1 (MQ=255)
                                                                                    cACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTg     <  1:7687589/93‑1 (MQ=255)
                                                                                     aCTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTgg    >  1:5842610/1‑93 (MQ=255)
                                                                                      cTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGt   <  1:5331705/93‑1 (MQ=255)
                                                                                      cTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGt   >  1:3165256/1‑93 (MQ=255)
                                                                                          |                                                                                         
CGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCTTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTT  >  NC_000913/3393816‑3393995

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATACGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCTTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTATAG  >  NC_000913/3393813‑3393999
                                                                                             |                                                                                             
ATACGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACTAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCC                                                                                               >  SRR4302543.3567123/1‑94 (MQ=60)
ATACGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCC                                                                                               >  SRR4302543.2241445/1‑94 (MQ=60)
ATACGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCC                                                                                               >  SRR4302543.6950142/1‑94 (MQ=60)
ATACGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCC                                                                                               >  SRR4302543.3505804/1‑94 (MQ=60)
 TACGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCT                                                                                              <  SRR4302543.6032188/94‑1 (MQ=60)
   CGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAACTCCCCGGCAATCGCCTCACCCGTCACTCCCTGT                                                                                            >  SRR4302543.7690252/1‑94 (MQ=60)
   CGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGT                                                                                            <  SRR4302543.697813/94‑1 (MQ=60)
   CGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGT                                                                                            >  SRR4302543.5315823/1‑94 (MQ=60)
    GCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTC                                                                                           >  SRR4302543.2329614/1‑94 (MQ=60)
     CAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCT                                                                                          <  SRR4302543.1170798/94‑1 (MQ=60)
     CAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCT                                                                                          <  SRR4302543.1178360/94‑1 (MQ=60)
     CAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCT                                                                                          >  SRR4302543.7686908/1‑94 (MQ=60)
     CAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCT                                                                                          <  SRR4302543.7130399/94‑1 (MQ=60)
      CGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTG                                                                                         <  SRR4302543.1708622/94‑1 (MQ=60)
      AGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTG                                                                                         <  SRR4302543.4006674/94‑1 (MQ=60)
        GCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCT                                                                                       <  SRR4302543.6995922/94‑1 (MQ=60)
            CTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAA                                                                                   >  SRR4302543.5679715/1‑94 (MQ=60)
            CTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAA                                                                                   <  SRR4302543.6646746/94‑1 (MQ=60)
            CTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAA                                                                                   >  SRR4302543.4385534/1‑94 (MQ=60)
              AACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAT                                                                                 <  SRR4302543.3017357/94‑1 (MQ=60)
              AACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAT                                                                                 >  SRR4302543.5287649/1‑94 (MQ=60)
              AACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAT                                                                                 <  SRR4302543.3217925/94‑1 (MQ=60)
              AACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAAT                                                                                 <  SRR4302543.1878277/94‑1 (MQ=60)
               ACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATG                                                                                >  SRR4302543.6384618/1‑94 (MQ=60)
               ACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATG                                                                                >  SRR4302543.5065648/1‑94 (MQ=60)
               ACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATG                                                                                >  SRR4302543.4410884/1‑94 (MQ=60)
               ACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATG                                                                                >  SRR4302543.66474/1‑94 (MQ=60)
               ACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATG                                                                                >  SRR4302543.7793849/1‑94 (MQ=60)
                CCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGT                                                                               <  SRR4302543.4098038/94‑1 (MQ=60)
                CCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGT                                                                               >  SRR4302543.1196267/1‑94 (MQ=60)
                CCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGT                                                                               >  SRR4302543.1704882/1‑94 (MQ=60)
                 CAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTG                                                                              <  SRR4302543.2079841/94‑1 (MQ=60)
                 CAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTG                                                                              >  SRR4302543.776329/1‑94 (MQ=60)
                 CAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTG                                                                              >  SRR4302543.6175891/1‑94 (MQ=60)
                 CAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTG                                                                              >  SRR4302543.4387666/1‑94 (MQ=60)
                 CAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTG                                                                              >  SRR4302543.2682063/1‑94 (MQ=60)
                  AGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGA                                                                             <  SRR4302543.2136976/94‑1 (MQ=60)
                  AGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGA                                                                             <  SRR4302543.7592522/94‑1 (MQ=60)
                  AGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGA                                                                             >  SRR4302543.7229413/1‑94 (MQ=60)
                   GCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGAC                                                                            <  SRR4302543.4120836/94‑1 (MQ=60)
                    CAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACT                                                                           >  SRR4302543.7068648/1‑94 (MQ=60)
                    CAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACT                                                                           <  SRR4302543.5916539/94‑1 (MQ=60)
                    CAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATACCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACT                                                                           >  SRR4302543.2338753/1‑94 (MQ=60)
                    CAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATACCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACT                                                                           >  SRR4302543.137869/1‑94 (MQ=60)
                     AGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTC                                                                          >  SRR4302543.5138910/1‑94 (MQ=60)
                     AGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAACTGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTC                                                                          >  SRR4302543.755366/1‑94 (MQ=60)
                       GGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAA                                                                        <  SRR4302543.2586500/94‑1 (MQ=60)
                       GGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAA                                                                        <  SRR4302543.3527222/94‑1 (MQ=60)
                        GCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAA                                                                       <  SRR4302543.6680428/94‑1 (MQ=60)
                          AGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAA                                                                     >  SRR4302543.6268643/1‑94 (MQ=60)
                          AGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAA                                                                     >  SRR4302543.188482/1‑94 (MQ=60)
                          AGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAA                                                                     >  SRR4302543.6746587/1‑94 (MQ=60)
                           GCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAAC                                                                    <  SRR4302543.2604006/94‑1 (MQ=60)
                           GCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAAC                                                                    <  SRR4302543.6337133/94‑1 (MQ=60)
                           GCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAAC                                                                    <  SRR4302543.3522368/94‑1 (MQ=60)
                            CGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACC                                                                   <  SRR4302543.962517/94‑1 (MQ=60)
                            CGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACC                                                                   <  SRR4302543.1618402/94‑1 (MQ=60)
                            CGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACC                                                                   <  SRR4302543.2355613/94‑1 (MQ=60)
                             GATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCC                                                                  >  SRR4302543.2228201/1‑94 (MQ=60)
                             GATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCC                                                                  <  SRR4302543.211381/94‑1 (MQ=60)
                              ATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCT                                                                 <  SRR4302543.1446917/94‑1 (MQ=60)
                              ATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCT                                                                 >  SRR4302543.2023965/1‑94 (MQ=60)
                               TCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTT                                                                <  SRR4302543.4440085/94‑1 (MQ=60)
                                CACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCTTGTCTGCTAAAAATGTGACTCAAAAACCCTTT                                                               >  SRR4302543.7197070/1‑94 (MQ=60)
                                CACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAACTGTGACTCAAAAACACTTT                                                               >  SRR4302543.588002/1‑94 (MQ=60)
                                 ACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTG                                                              >  SRR4302543.5026146/1‑94 (MQ=60)
                                 ACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTG                                                              <  SRR4302543.614507/94‑1 (MQ=60)
                                 ACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTG                                                              <  SRR4302543.6955434/94‑1 (MQ=60)
                                 ACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTG                                                              <  SRR4302543.1039771/94‑1 (MQ=60)
                                     CGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGG                                                          <  SRR4302543.7626321/94‑1 (MQ=60)
                                      GAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGA                                                         >  SRR4302543.6447230/1‑94 (MQ=60)
                                        GCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATG                                                       <  SRR4302543.2444275/94‑1 (MQ=60)
                                        GCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATG                                                       <  SRR4302543.278233/94‑1 (MQ=60)
                                            GGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGG                                                   <  SRR4302543.3683183/94‑1 (MQ=60)
                                             GCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGC                                                  <  SRR4302543.6925847/94‑1 (MQ=60)
                                              CTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCC                                                 >  SRR4302543.4615244/1‑94 (MQ=60)
                                              CTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCC                                                 >  SRR4302543.677739/1‑94 (MQ=60)
                                               TCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCC                                                <  SRR4302543.5270851/94‑1 (MQ=60)
                                                CCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGCTGGCGCCCCA                                               >  SRR4302543.5677208/1‑94 (MQ=60)
                                                CCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCA                                               >  SRR4302543.7436936/1‑94 (MQ=60)
                                                CCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCA                                               <  SRR4302543.4438544/94‑1 (MQ=60)
                                                CCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCA                                               <  SRR4302543.5900356/94‑1 (MQ=60)
                                                 CAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAG                                              <  SRR4302543.6741843/94‑1 (MQ=60)
                                                 CAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAG                                              >  SRR4302543.2346735/1‑94 (MQ=60)
                                                 CAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAG                                              <  SRR4302543.4235851/94‑1 (MQ=60)
                                                 CAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAG                                              >  SRR4302543.7848273/1‑94 (MQ=60)
                                                  AGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGC                                             >  SRR4302543.6189593/1‑94 (MQ=60)
                                                  AGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGC                                             >  SRR4302543.6189594/1‑94 (MQ=60)
                                                  AGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGC                                             >  SRR4302543.7922183/1‑94 (MQ=60)
                                                  AGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGC                                             >  SRR4302543.1348901/1‑94 (MQ=60)
                                                     AAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATC                                          <  SRR4302543.6797432/94‑1 (MQ=60)
                                                     AAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCCGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATC                                          >  SRR4302543.6777318/1‑94 (MQ=60)
                                                        CAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGT                                       <  SRR4302543.2533203/94‑1 (MQ=60)
                                                        CAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGT                                       >  SRR4302543.1790022/1‑94 (MQ=60)
                                                        CAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGT                                       <  SRR4302543.2184392/94‑1 (MQ=60)
                                                         AGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTT                                      >  SRR4302543.2657491/1‑94 (MQ=60)
                                                         AGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTT                                      >  SRR4302543.1762915/1‑94 (MQ=60)
                                                          GTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATTGCGGCCCAGCATCTGTTT                                     <  SRR4302543.7768163/94‑1 (MQ=60)
                                                          GTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTT                                     >  SRR4302543.1412877/1‑94 (MQ=60)
                                                          GTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTT                                     >  SRR4302543.757518/1‑94 (MQ=60)
                                                          GTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTT                                     <  SRR4302543.7018426/94‑1 (MQ=60)
                                                          GTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTT                                     <  SRR4302543.3614549/94‑1 (MQ=60)
                                                           TAAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTA                                    >  SRR4302543.1280481/1‑94 (MQ=60)
                                                            AAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAC                                   <  SRR4302543.7543505/94‑1 (MQ=60)
                                                            AAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAC                                   >  SRR4302543.6470513/1‑94 (MQ=60)
                                                            AAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTAC                                   >  SRR4302543.7516993/1‑94 (MQ=60)
                                                            AAAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGCCGGCCCAGCATCTGTTTAC                                   >  SRR4302543.7516994/1‑94 (MQ=60)
                                                             AAATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACA                                  >  SRR4302543.1031551/1‑94 (MQ=60)
                                                              AATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAACCCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACAT                                 <  SRR4302543.5444847/94‑1 (MQ=60)
                                                              AATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACAT                                 >  SRR4302543.587276/1‑94 (MQ=60)
                                                              AATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACAT                                 <  SRR4302543.7418230/94‑1 (MQ=60)
                                                              AATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACAT                                 <  SRR4302543.6201665/94‑1 (MQ=60)
                                                               ATCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATC                                >  SRR4302543.6404789/1‑94 (MQ=60)
                                                                TCCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCA                               >  SRR4302543.5491121/1‑94 (MQ=60)
                                                                ACCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCA                               <  SRR4302543.2294035/94‑1 (MQ=60)
                                                                ACCCCGGCAATCGCCCCCCCCCTCCCTCCCTGTCTGCTAAAAATGTTGCTCAAAAACCCTTTGGCGGGTGGCCGCCCAGCATCTGTTTACATCA                               <  SRR4302543.6559921/94‑1 (MQ=40)
                                                                 CCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCAT                              >  SRR4302543.5033103/1‑94 (MQ=60)
                                                                 CCCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCAT                              <  SRR4302543.1327637/94‑1 (MQ=60)
                                                                  CCCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATT                             <  SRR4302543.7143518/94‑1 (MQ=60)
                                                                  CCCGGCAATCGCCTCACCCGTCACGCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATT                             <  SRR4302543.301563/94‑1 (MQ=60)
                                                                   CCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTA                            <  SRR4302543.6177909/94‑1 (MQ=60)
                                                                   CCGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTA                            <  SRR4302543.6611540/94‑1 (MQ=60)
                                                                    CGTCAATCGCCTCACCCGTCACTCCGTGTCTGCTAAAAATGTGACTCAAAATCCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTAC                           <  SRR4302543.3222378/94‑1 (MQ=60)
                                                                    CGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTAC                           >  SRR4302543.6324702/1‑94 (MQ=60)
                                                                    CGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTAC                           <  SRR4302543.7536390/94‑1 (MQ=60)
                                                                    CGGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTAC                           <  SRR4302543.3646733/94‑1 (MQ=60)
                                                                     GGCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACG                          <  SRR4302543.5324212/94‑1 (MQ=60)
                                                                      GCAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGA                         <  SRR4302543.827539/94‑1 (MQ=60)
                                                                       CAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGAC                        <  SRR4302543.1385710/94‑1 (MQ=60)
                                                                       CAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGAC                        <  SRR4302543.3446919/94‑1 (MQ=60)
                                                                       CAATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGAC                        <  SRR4302543.6804880/94‑1 (MQ=60)
                                                                        AATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACG                       >  SRR4302543.6518795/1‑94 (MQ=60)
                                                                        AATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACG                       <  SRR4302543.4423457/94‑1 (MQ=60)
                                                                        AATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACG                       <  SRR4302543.4423458/94‑1 (MQ=60)
                                                                        AATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACG                       <  SRR4302543.4387425/94‑1 (MQ=60)
                                                                        AATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGAGACTCAAAAACCCTTTGCCGGATGGGCGCCCAGAATCTGCTTACATCATTACGACG                       >  SRR4302543.2559212/1‑94 (MQ=60)
                                                                        AACCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACG                       <  SRR4302543.400548/94‑1 (MQ=60)
                                                                         ATCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGT                      >  SRR4302543.4025652/1‑94 (MQ=60)
                                                                          TCGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTC                     <  SRR4302543.7402261/94‑1 (MQ=60)
                                                                           CGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCA                    <  SRR4302543.3879361/94‑1 (MQ=60)
                                                                           CGCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCA                    >  SRR4302543.5638664/1‑94 (MQ=60)
                                                                            GCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAA                   >  SRR4302543.1949523/1‑94 (MQ=60)
                                                                            GCCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAA                   >  SRR4302543.613466/1‑94 (MQ=60)
                                                                             CCTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAA                  <  SRR4302543.1323311/94‑1 (MQ=60)
                                                                              CTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAAC                 >  SRR4302543.6968392/1‑94 (MQ=60)
                                                                              CTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAAC                 <  SRR4302543.2311234/94‑1 (MQ=60)
                                                                              CTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAAC                 >  SRR4302543.4426710/1‑94 (MQ=60)
                                                                              CTCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAAC                 <  SRR4302543.3377469/94‑1 (MQ=60)
                                                                               TCACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACT                >  SRR4302543.2889468/1‑94 (MQ=60)
                                                                               TCACCCGTCACTCCCTGTCGGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACT                >  SRR4302543.2388319/1‑94 (MQ=60)
                                                                                CACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTG               <  SRR4302543.1700754/94‑1 (MQ=60)
                                                                                CACCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTC               >  SRR4302543.5778353/1‑94 (MQ=60)
                                                                                  CCCGTCCCTCCCTGTCTGCTAAAAATGTTACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCT             <  SRR4302543.5878633/94‑1 (MQ=60)
                                                                                  CCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCT             <  SRR4302543.5151852/94‑1 (MQ=60)
                                                                                  CCCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCT             <  SRR4302543.5151851/94‑1 (MQ=60)
                                                                                   CCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCCGCATCTGTTTACATCCTTACGACGTCAAACTGCTC            >  SRR4302543.4881394/1‑94 (MQ=60)
                                                                                   CCGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTC            >  SRR4302543.327486/1‑94 (MQ=60)
                                                                                    CGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCC           <  SRR4302543.1855827/94‑1 (MQ=60)
                                                                                    CGTCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCC           >  SRR4302543.148382/1‑94 (MQ=60)
                                                                                      TCACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTG         <  SRR4302543.267844/94‑1 (MQ=60)
                                                                                       CACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGG        <  SRR4302543.597218/94‑1 (MQ=60)
                                                                                       CACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGG        >  SRR4302543.5895764/1‑94 (MQ=60)
                                                                                       CACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGG        >  SRR4302543.2504177/1‑94 (MQ=60)
                                                                                       CACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGG        <  SRR4302543.7760387/94‑1 (MQ=60)
                                                                                        ACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGT       >  SRR4302543.1683294/1‑94 (MQ=60)
                                                                                        ACTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGT       >  SRR4302543.3193753/1‑94 (MQ=60)
                                                                                         CTCCCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTT      <  SRR4302543.5379919/94‑1 (MQ=60)
                                                                                          TCCCTGTGTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTA     >  SRR4302543.4035220/1‑94 (MQ=60)
                                                                                            CCTGTCTGCTAAAAATGTGACTCAAAAGCCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTATA   <  SRR4302543.17045/94‑1 (MQ=60)
                                                                                            CCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTATA   <  SRR4302543.4455828/94‑1 (MQ=60)
                                                                                            CCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTATA   <  SRR4302543.7874911/94‑1 (MQ=60)
                                                                                            CCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTATA   >  SRR4302543.6279050/1‑94 (MQ=60)
                                                                                            CCTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTATA   >  SRR4302543.859306/1‑94 (MQ=60)
                                                                                             CTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTATAG  <  SRR4302543.5809361/94‑1 (MQ=60)
                                                                                             |                                                                                             
ATACGCAGGCCGCTAACCAGCAGGGCAGCGATCACAACGAGCGCGGCTCCAGTAAGCAGTAAAATCCCCGGCAATCGCCTCACCCGTCACTCCTTGTCTGCTAAAAATGTGACTCAAAAACCCTTTGCCGGATGGCGGCCCAGCATCTGTTTACATCATTACGACGTCAAACTGCTCCTGGTTATAG  >  NC_000913/3393813‑3393999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑