Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,418,840 +G coding (1070/1089 nt) b3269 → putative transport system permease protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,418,8371.G99.4% 988.1 / ‑1.6 314coding (1067/1089 nt)b3269putative transport system permease protein
Reads supporting (aligned to +/- strand):  ref base . (0/2);  new base G (148/164);  total (148/166)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.63e-01

Only 100 of 357 total aligned reads displayed.

GTATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGC  >  NC_000913/3418745‑3418927
                                                                                             |                                                                                           
gTATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAc                                                                                              <  2:5609146/93‑1 (MQ=255)
gTATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAc                                                                                              <  2:3640891/93‑1 (MQ=255)
gTATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAc                                                                                              <  1:2114819/93‑1 (MQ=255)
   tctcAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑ggg                                                                                          <  1:102422/93‑1 (MQ=255)
     tcAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑ggggc                                                                                        >  1:7798289/1‑91 (MQ=255)
     tcAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑ggggc                                                                                        >  1:5483493/1‑91 (MQ=255)
      cAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGCATCAGAC‑ggggca                                                                                       >  2:3429387/1‑90 (MQ=255)
       aaCATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑ggggcaa                                                                                      >  1:857567/1‑89 (MQ=255)
          aTCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGcc                                                                                   >  1:6926179/1‑93 (MQ=255)
          aTCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGcc                                                                                   >  2:3506655/1‑93 (MQ=255)
           tCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCa                                                                                  >  1:3608801/1‑93 (MQ=255)
           tCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCa                                                                                  >  2:7462351/1‑93 (MQ=255)
            cGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCAt                                                                                 >  1:7543078/1‑93 (MQ=255)
               cAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCga                                                                              <  1:6624621/93‑1 (MQ=255)
               cAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCga                                                                              >  2:4641944/1‑93 (MQ=255)
                 aaatCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCgaga                                                                            <  2:4155673/93‑1 (MQ=255)
                 aaatCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCgaga                                                                            <  1:5065246/93‑1 (MQ=255)
                  aacctcctcTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGAc                                                                           <  1:4617534/90‑1 (MQ=255)
                  aaaCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGAc                                                                           >  1:1577626/1‑93 (MQ=255)
                   aaCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACg                                                                          >  2:4051440/1‑93 (MQ=255)
                    aCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGa                                                                         <  2:7757851/93‑1 (MQ=255)
                     ctcctcTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGAt                                                                        >  1:5954043/1‑93 (MQ=255)
                      tcctcTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGGATCAGACGGGG‑CAAGCCATCGAGACGATa                                                                       >  1:228896/1‑93 (MQ=255)
                      tcctcTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATa                                                                       >  1:2953787/1‑93 (MQ=255)
                      tcctcTCTTGACGGGGGTATTGACTATCCCGAAATGGTTTCGCTGAAAGCCGGCACCGTGCTGAATCAGCC‑GGGCCACGCCCTCGCGACGAtg                                                                       >  2:2417841/1‑92 (MQ=255)
                       cctcTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAg                                                                      <  2:2669/93‑1 (MQ=255)
                       cctcTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAg                                                                      >  1:3127729/1‑93 (MQ=255)
                          ctctTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCa                                                                   >  2:661/1‑93 (MQ=255)
                          ctctTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCa                                                                   <  2:227693/93‑1 (MQ=255)
                           tctTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCAt                                                                  >  1:4354908/1‑93 (MQ=255)
                            ctTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATg                                                                 >  1:977855/1‑93 (MQ=255)
                              tGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGAc                                                               <  1:1667240/93‑1 (MQ=255)
                                ccgccgCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCa                                                             <  1:7462352/93‑1 (MQ=255)
                                ccgccgCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCa                                                             <  1:1966413/93‑1 (MQ=255)
                                 cgccgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCAt                                                            <  1:4196304/93‑1 (MQ=255)
                                 cgccgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCAt                                                            <  1:7270472/93‑1 (MQ=255)
                                 cgccgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCAt                                                            <  1:6985021/93‑1 (MQ=255)
                                    cgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTc                                                         >  2:512054/1‑93 (MQ=255)
                                      cTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCgg                                                       <  1:7155318/93‑1 (MQ=255)
                                      cTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCgg                                                       <  2:3045981/93‑1 (MQ=255)
                                      cTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCgg                                                       <  2:6936406/93‑1 (MQ=255)
                                          tGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTa                                                   <  2:7545551/93‑1 (MQ=255)
                                            gCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATc                                                 <  2:380907/93‑1 (MQ=255)
                                             cTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCt                                                >  1:2527382/1‑93 (MQ=255)
                                             cTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCt                                                <  1:4647423/93‑1 (MQ=255)
                                               aTCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTGTATCTGa                                              <  1:1393463/93‑1 (MQ=255)
                                               aTCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGa                                              <  2:5387350/93‑1 (MQ=255)
                                               aTCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGa                                              <  2:3267130/93‑1 (MQ=255)
                                                tCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGAt                                             >  2:2536294/1‑93 (MQ=255)
                                                  ccGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTa                                           <  2:6175949/93‑1 (MQ=255)
                                                  ccGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTa                                           >  1:6388569/1‑93 (MQ=255)
                                                   cGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTAt                                          <  1:1337046/93‑1 (MQ=255)
                                                    gATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATc                                         >  1:1172546/1‑93 (MQ=255)
                                                     atatGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATcc                                        >  2:1735758/1‑92 (MQ=255)
                                                     atatGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCa                                        >  1:6000413/1‑93 (MQ=255)
                                                      tatGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAg                                       >  1:7722720/1‑93 (MQ=255)
                                                      tatGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAg                                       >  2:1358466/1‑93 (MQ=255)
                                                       ttgttttGGCTGTTTGCCGGCCCCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGc                                      <  2:3218082/89‑1 (MQ=255)
                                                        tGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGcc                                     >  2:4100853/1‑93 (MQ=255)
                                                        tGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGcc                                     <  2:1537472/93‑1 (MQ=255)
                                                        tGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGcc                                     <  1:4100854/93‑1 (MQ=255)
                                                        tGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCAGGTCGGTCTATCTGATTATCAGcc                                     >  2:4279435/1‑93 (MQ=255)
                                                         ggTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCt                                    <  2:868741/93‑1 (MQ=255)
                                                         ggTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCt                                    <  1:3959823/93‑1 (MQ=255)
                                                          gTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCta                                   >  1:803576/1‑92 (MQ=255)
                                                          gTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTg                                   <  1:563204/93‑1 (MQ=255)
                                                           tttCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGa                                  >  2:5908470/1‑93 (MQ=255)
                                                            ttCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGAc                                 <  2:4806851/93‑1 (MQ=255)
                                                            ttCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGAc                                 <  2:3754277/93‑1 (MQ=255)
                                                            ttCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGAc                                 <  2:7273192/93‑1 (MQ=255)
                                                              cGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTa                               <  2:1064807/93‑1 (MQ=255)
                                                              cGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTa                               <  2:444667/93‑1 (MQ=255)
                                                               gCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAt                              >  1:4256545/1‑93 (MQ=255)
                                                                cTGTTTGCCGGCCCCCTGCTGAATCAGAC‑GGGCCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAtc                             <  2:788502/93‑1 (MQ=255)
                                                                 tGTTTGCCGGCACCGTGCTGAAACAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAtct                            <  2:3358849/93‑1 (MQ=255)
                                                                  gTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAtctc                           <  1:886173/93‑1 (MQ=255)
                                                                  gTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAtctc                           <  1:495292/93‑1 (MQ=255)
                                                                   tttGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACAATCTCg                          >  2:1627933/1‑93 (MQ=255)
                                                                      gCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCgctg                       >  2:7130005/1‑93 (MQ=255)
                                                                          gCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCtga                   <  1:5226011/93‑1 (MQ=255)
                                                                            aCCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCtgatg                 >  2:4528660/1‑93 (MQ=255)
                                                                             ccGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCtgatga                <  1:3290000/93‑1 (MQ=255)
                                                                             ccGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCtgatga                <  1:4432874/93‑1 (MQ=255)
                                                                              cGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGaa               <  1:6099612/93‑1 (MQ=255)
                                                                              cGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGaa               >  1:675564/1‑93 (MQ=255)
                                                                              cGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGaa               >  1:4537709/1‑93 (MQ=255)
                                                                               gTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAat              >  1:4886671/1‑93 (MQ=255)
                                                                                tGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAata             <  2:1862732/93‑1 (MQ=255)
                                                                                tGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAata             <  1:4798455/93‑1 (MQ=255)
                                                                                tGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAata             <  2:5020745/93‑1 (MQ=255)
                                                                                 gCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAatat            >  2:3906/1‑93 (MQ=255)
                                                                                  cTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATc           <  2:6384108/93‑1 (MQ=255)
                                                                                   tGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCt          >  1:766781/1‑93 (MQ=255)
                                                                                   tGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCt          >  2:2779620/1‑93 (MQ=255)
                                                                                      aTCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCtata       >  2:6740684/1‑93 (MQ=255)
                                                                                      aTCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCtata       >  1:3668384/1‑93 (MQ=255)
                                                                                       tCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATaa      <  1:5430840/93‑1 (MQ=255)
                                                                                       tCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCCATaa      >  2:5145636/1‑93 (MQ=255)
                                                                                        cAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAAc     <  2:6100327/93‑1 (MQ=255)
                                                                                        cAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAAc     <  1:199778/93‑1 (MQ=255)
                                                                                             |                                                                                           
GTATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGC  >  NC_000913/3418745‑3418927

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑C‑GGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCAT  >  NC_000913/3418747‑3418932
                                                                                               |                                                                                            
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑C‑GGG                                                                                              <  SRR4302543.3867884/94‑1 (MQ=60)
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑C‑GGG                                                                                              <  SRR4302543.5769785/94‑1 (MQ=60)
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑C‑GGG                                                                                              >  SRR4302543.831613/1‑94 (MQ=60)
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑C‑GGG                                                                                              >  SRR4302543.5125855/1‑94 (MQ=60)
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑C‑GGG                                                                                              <  SRR4302543.5194835/94‑1 (MQ=60)
ATCTAAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑C‑GGG                                                                                              >  SRR4302543.1494731/1‑94 (MQ=60)
 TCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑C‑GGGG                                                                                             <  SRR4302543.103369/94‑1 (MQ=60)
 TCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑C‑GGGG                                                                                             >  SRR4302543.7618893/1‑94 (MQ=60)
 TCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAAGCAGA‑C‑GGGG                                                                                             >  SRR4302543.4668469/1‑94 (MQ=60)
  CTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑C‑GGGgc                                                                                            >  SRR4302543.1134239/1‑92 (MQ=60)
  CTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑C‑GGGgc                                                                                            >  SRR4302543.7871777/1‑92 (MQ=60)
  CTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑C‑GGGgc                                                                                            >  SRR4302543.5533196/1‑92 (MQ=60)
   TCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑C‑GGGgca                                                                                           >  SRR4302543.2306132/1‑91 (MQ=60)
    CAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAA                                                                                           >  SRR4302543.1988424/1‑94 (MQ=60)
    CAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAA                                                                                           >  SRR4302543.865205/1‑94 (MQ=60)
     AACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAG                                                                                          <  SRR4302543.5022149/94‑1 (MQ=60)
     AACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAG                                                                                          >  SRR4302543.7767877/1‑94 (MQ=60)
     AACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAG                                                                                          >  SRR4302543.3329745/1‑94 (MQ=60)
     AACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAG                                                                                          >  SRR4302543.6171144/1‑94 (MQ=60)
      ACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGC                                                                                         >  SRR4302543.1049113/1‑94 (MQ=60)
       CATCGTCAAAGACTCCTCTCTTGCCGCCGCTATTGGCTATGCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCC                                                                                        <  SRR4302543.7751027/94‑1 (MQ=60)
       CATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCC                                                                                        <  SRR4302543.7751167/94‑1 (MQ=60)
       CATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCC                                                                                        >  SRR4302543.6991305/1‑94 (MQ=60)
       CATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCC                                                                                        >  SRR4302543.6675496/1‑94 (MQ=60)
        ATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCA                                                                                       >  SRR4302543.3640639/1‑94 (MQ=60)
         TCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCAT                                                                                      >  SRR4302543.3138441/1‑94 (MQ=60)
         TCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCAT                                                                                      >  SRR4302543.7614960/1‑94 (MQ=60)
         TCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCAT                                                                                      <  SRR4302543.96565/94‑1 (MQ=60)
          CGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATC                                                                                     >  SRR4302543.3478509/1‑94 (MQ=60)
             CAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAG                                                                                  >  SRR4302543.3644174/1‑94 (MQ=60)
             CAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAG                                                                                  <  SRR4302543.6687098/94‑1 (MQ=60)
              AAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGA                                                                                 >  SRR4302543.7529216/1‑94 (MQ=60)
              AAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGA                                                                                 >  SRR4302543.6576363/1‑94 (MQ=60)
               AAATCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGAC                                                                                <  SRR4302543.5111239/94‑1 (MQ=60)
               AAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGAC                                                                                >  SRR4302543.1591705/1‑94 (MQ=60)
               AAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGAC                                                                                <  SRR4302543.3690304/94‑1 (MQ=60)
               AAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCAGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGGAAGCCATCGAGAC                                                                                >  SRR4302543.3996013/1‑94 (MQ=60)
               AAAACCCCTCTCTTGCCGCCGCTATTGCCTATCCCGATGTGGTTTCGCTGTTTGCCGCCGCCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGAC                                                                                <  SRR4302543.4270526/94‑1 (MQ=60)
                AACCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACG                                                                               <  SRR4302543.4659489/94‑1 (MQ=60)
                AACCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACG                                                                               <  SRR4302543.7274241/94‑1 (MQ=60)
                AAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACG                                                                               >  SRR4302543.4880626/1‑94 (MQ=60)
                 AACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGA                                                                              >  SRR4302543.6244815/1‑94 (MQ=60)
                  ACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGAT                                                                             >  SRR4302543.6008538/1‑94 (MQ=60)
                  ACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGAT                                                                             >  SRR4302543.3237971/1‑94 (MQ=60)
                   CTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGGATCAGA‑CGGGGCAAGCCATCGAGACGATA                                                                            >  SRR4302543.230874/1‑94 (MQ=60)
                   CTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATA                                                                            >  SRR4302543.4087655/1‑94 (MQ=60)
                   CTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATA                                                                            <  SRR4302543.8006799/94‑1 (MQ=60)
                   CTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATA                                                                            >  SRR4302543.2980606/1‑94 (MQ=60)
                   CTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATA                                                                            <  SRR4302543.54351/94‑1 (MQ=60)
                   CTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATA                                                                            >  SRR4302543.6828929/1‑94 (MQ=60)
                    TCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAG                                                                           >  SRR4302543.3155862/1‑94 (MQ=60)
                     CCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGC                                                                          <  SRR4302543.685379/94‑1 (MQ=60)
                      CTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCC                                                                         >  SRR4302543.4309877/1‑94 (MQ=60)
                      CTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCC                                                                         >  SRR4302543.4309876/1‑94 (MQ=60)
                      CTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCC                                                                         >  SRR4302543.2482302/1‑94 (MQ=60)
                       TCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCA                                                                        >  SRR4302543.4667089/1‑94 (MQ=60)
                        CTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGTCATCGAGACGATAGCCAT                                                                       >  SRR4302543.4775628/1‑94 (MQ=60)
                        CTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCAT                                                                       <  SRR4302543.3205937/94‑1 (MQ=60)
                        CTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCAT                                                                       <  SRR4302543.7766642/94‑1 (MQ=60)
                        CTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCAT                                                                       >  SRR4302543.4394373/1‑94 (MQ=60)
                         TCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATG                                                                      >  SRR4302543.986488/1‑94 (MQ=60)
                         TCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATG                                                                      <  SRR4302543.3814293/94‑1 (MQ=60)
                           TTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGAC                                                                    <  SRR4302543.4517401/94‑1 (MQ=60)
                            TGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACC                                                                   <  SRR4302543.1682172/94‑1 (MQ=60)
                              CCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCAT                                                                 <  SRR4302543.1984042/94‑1 (MQ=60)
                              CCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCAT                                                                 <  SRR4302543.7533829/94‑1 (MQ=60)
                               CGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATG                                                                <  SRR4302543.7340709/94‑1 (MQ=60)
                               CGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATG                                                                <  SRR4302543.7050763/94‑1 (MQ=60)
                               CGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATG                                                                <  SRR4302543.4234349/94‑1 (MQ=60)
                               CGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATG                                                                >  SRR4302543.3865846/1‑94 (MQ=60)
                                  CGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCG                                                             >  SRR4302543.7538204/1‑94 (MQ=60)
                                   GCTATTGTCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAGG‑GGGCAAGCCATCGAGACGATAGCCATGACCATGTCGG                                                            <  SRR4302543.2124757/94‑1 (MQ=60)
                                    CTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGT                                                           >  SRR4302543.199016/1‑94 (MQ=60)
                                    CTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGT                                                           >  SRR4302543.1470227/1‑94 (MQ=60)
                                    CTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGT                                                           <  SRR4302543.7224863/94‑1 (MQ=60)
                                       TTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTA                                                        <  SRR4302543.7972024/94‑1 (MQ=60)
                                        TGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTAT                                                       <  SRR4302543.4309560/94‑1 (MQ=60)
                                         GGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATC                                                      >  SRR4302543.6213930/1‑94 (MQ=60)
                                          GCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCT                                                     <  SRR4302543.881274/94‑1 (MQ=60)
                                          GCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCT                                                     <  SRR4302543.3528431/94‑1 (MQ=60)
                                          GCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCT                                                     >  SRR4302543.2550373/1‑94 (MQ=60)
                                          GCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCT                                                     >  SRR4302543.7080935/1‑94 (MQ=60)
                                           CTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTTAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTG                                                    <  SRR4302543.4890822/94‑1 (MQ=60)
                                           CTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTG                                                    <  SRR4302543.4689710/94‑1 (MQ=60)
                                           CTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTG                                                    <  SRR4302543.2883925/94‑1 (MQ=60)
                                            TATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGA                                                   >  SRR4302543.7849057/1‑94 (MQ=60)
                                            TATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGA                                                   >  SRR4302543.3222012/1‑94 (MQ=60)
                                             ATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTGTATCTGAT                                                  <  SRR4302543.1406015/94‑1 (MQ=60)
                                             ATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGAT                                                  >  SRR4302543.6824688/1‑94 (MQ=60)
                                             ATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGAT                                                  <  SRR4302543.610688/94‑1 (MQ=60)
                                             ATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGAT                                                  >  SRR4302543.2201021/1‑94 (MQ=60)
                                             ATCCCGATATGGTTTCGCTGTTTGCCGACACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGAT                                                  <  SRR4302543.7326791/94‑1 (MQ=60)
                                              TCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATT                                                 <  SRR4302543.1561719/94‑1 (MQ=60)
                                               CCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTA                                                <  SRR4302543.893574/94‑1 (MQ=60)
                                               CCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTA                                                <  SRR4302543.6360464/94‑1 (MQ=60)
                                               CCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTA                                                >  SRR4302543.6448702/1‑94 (MQ=60)
                                               CCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTA                                                >  SRR4302543.7410535/1‑94 (MQ=60)
                                                CCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTAT                                               <  SRR4302543.7032037/94‑1 (MQ=60)
                                                CCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTAT                                               >  SRR4302543.7073198/1‑94 (MQ=60)
                                                CCGATATGGTGTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGTCGATAGCCATGACCATGTCGGTCTATCTGATTAT                                               <  SRR4302543.7032036/94‑1 (MQ=60)
                                                 CGATTTGGTTTCGCTGTTTGCCGGCCCCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGGCGATAGCCATGACCATGTCGGTCTATCTGATTATC                                              <  SRR4302543.1672369/94‑1 (MQ=60)
                                                 CGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATC                                              <  SRR4302543.4805490/94‑1 (MQ=60)
                                                 CGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATC                                              <  SRR4302543.4805489/94‑1 (MQ=60)
                                                 CGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATC                                              >  SRR4302543.1183181/1‑94 (MQ=60)
                                                 CGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATC                                              <  SRR4302543.1348970/94‑1 (MQ=60)
                                                 CGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATC                                              >  SRR4302543.5326767/1‑94 (MQ=60)
                                                 CGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATC                                              <  SRR4302543.1348971/94‑1 (MQ=60)
                                                  GATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCA                                             <  SRR4302543.7372711/94‑1 (MQ=60)
                                                  GATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCA                                             >  SRR4302543.4564271/1‑94 (MQ=60)
                                                  GATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCA                                             >  SRR4302543.6055534/1‑94 (MQ=60)
                                                  GATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCA                                             <  SRR4302543.4529473/94‑1 (MQ=60)
                                                   ATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAG                                            >  SRR4302543.7795735/1‑94 (MQ=60)
                                                   ATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAG                                            >  SRR4302543.424880/1‑94 (MQ=60)
                                                   ATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAG                                            >  SRR4302543.7958805/1‑94 (MQ=60)
                                                   ATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAC                                            >  SRR4302543.1911577/1‑94 (MQ=60)
                                                    TATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGC                                           <  SRR4302543.6766976/94‑1 (MQ=60)
                                                     ATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCC                                          <  SRR4302543.6092444/94‑1 (MQ=60)
                                                      TGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCT                                         <  SRR4302543.4137715/94‑1 (MQ=60)
                                                      TGGTTTCGCGGTTTGCCGCCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCT                                         <  SRR4302543.5407606/94‑1 (MQ=60)
                                                      GGGTTTGGCTGTTGGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCT                                         <  SRR4302543.4937480/94‑1 (MQ=60)
                                                       GGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTG                                        <  SRR4302543.1250412/94‑1 (MQ=60)
                                                       GGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTG                                        <  SRR4302543.3994886/94‑1 (MQ=60)
                                                       GGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTA                                        >  SRR4302543.810645/1‑94 (MQ=60)
                                                        GTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGA                                       <  SRR4302543.568363/94‑1 (MQ=60)
                                                        GTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGA                                       >  SRR4302543.949255/1‑94 (MQ=60)
                                                          TTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACT                                     >  SRR4302543.2317729/1‑94 (MQ=60)
                                                           TCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTA                                    <  SRR4302543.3640801/94‑1 (MQ=60)
                                                            CGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAT                                   <  SRR4302543.3090590/94‑1 (MQ=60)
                                                            CGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAT                                   >  SRR4302543.2980399/1‑94 (MQ=60)
                                                            CGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAT                                   <  SRR4302543.4637473/94‑1 (MQ=60)
                                                            CGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAT                                   >  SRR4302543.7773094/1‑94 (MQ=60)
                                                            CGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAT                                   >  SRR4302543.4295189/1‑94 (MQ=60)
                                                            CGCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAT                                   <  SRR4302543.1295385/94‑1 (MQ=60)
                                                            CGCTGTTTGCCGCCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAT                                   <  SRR4302543.4637474/94‑1 (MQ=60)
                                                             GCTGTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATC                                  <  SRR4302543.7841371/94‑1 (MQ=60)
                                                              CTTTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCT                                 <  SRR4302543.7580054/94‑1 (MQ=60)
                                                                GTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCG                               <  SRR4302543.499872/94‑1 (MQ=60)
                                                                GTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCG                               <  SRR4302543.894025/94‑1 (MQ=60)
                                                                GTTTGCCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCG                               <  SRR4302543.5513869/94‑1 (MQ=60)
                                                                     CCGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCT                          <  SRR4302543.1354804/94‑1 (MQ=60)
                                                                      CGGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTG                         <  SRR4302543.5554612/94‑1 (MQ=60)
                                                                       GGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGA                        >  SRR4302543.6747934/1‑94 (MQ=60)
                                                                       GGCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGA                        >  SRR4302543.4460400/1‑94 (MQ=60)
                                                                        GCACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGAT                       <  SRR4302543.5273066/94‑1 (MQ=60)
                                                                         CACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATG                      >  SRR4302543.1291480/1‑94 (MQ=60)
                                                                         CACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATG                      >  SRR4302543.5097091/1‑94 (MQ=60)
                                                                          ACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGA                     >  SRR4302543.4580450/1‑94 (MQ=60)
                                                                          ACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGA                     >  SRR4302543.6023970/1‑94 (MQ=60)
                                                                          ACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGA                     >  SRR4302543.7587273/1‑94 (MQ=60)
                                                                          ACCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGA                     >  SRR4302543.7173231/1‑94 (MQ=60)
                                                                           CCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAA                    <  SRR4302543.1896486/94‑1 (MQ=60)
                                                                           CCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAA                    >  SRR4302543.4579020/1‑94 (MQ=60)
                                                                           CCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAA                    <  SRR4302543.3319694/94‑1 (MQ=60)
                                                                           CCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAA                    <  SRR4302543.4473027/94‑1 (MQ=60)
                                                                           CCGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAA                    >  SRR4302543.681779/1‑94 (MQ=60)
                                                                            CGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAAT                   <  SRR4302543.4192370/94‑1 (MQ=60)
                                                                            CGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAAT                   >  SRR4302543.4931211/1‑94 (MQ=60)
                                                                            CGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAAT                   >  SRR4302543.5607594/1‑94 (MQ=60)
                                                                            CGTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAAT                   <  SRR4302543.6157404/94‑1 (MQ=60)
                                                                             GTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATA                  >  SRR4302543.5572475/1‑94 (MQ=60)
                                                                             GTGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATA                  >  SRR4302543.848511/1‑94 (MQ=60)
                                                                              TGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATAT                 <  SRR4302543.953310/94‑1 (MQ=60)
                                                                              TGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATAT                 >  SRR4302543.2669351/1‑94 (MQ=60)
                                                                              TGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATAT                 <  SRR4302543.4842310/94‑1 (MQ=60)
                                                                              TGCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATAT                 >  SRR4302543.866419/1‑94 (MQ=60)
                                                                               GCTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATC                <  SRR4302543.4995845/94‑1 (MQ=60)
                                                                                GTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCGATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCT               <  SRR4302543.5243147/94‑1 (MQ=60)
                                                                                CTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCT               >  SRR4302543.4157625/1‑94 (MQ=60)
                                                                                CTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCT               <  SRR4302543.6616842/94‑1 (MQ=60)
                                                                                CTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCT               <  SRR4302543.6050120/94‑1 (MQ=60)
                                                                                CTGAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCT               >  SRR4302543.773522/1‑94 (MQ=60)
                                                                                  GAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTAT             >  SRR4302543.4211639/1‑94 (MQ=60)
                                                                                  GAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTAT             <  SRR4302543.1861763/94‑1 (MQ=60)
                                                                                  GAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTAT             >  SRR4302543.6034478/1‑94 (MQ=60)
                                                                                  GAATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTAT             <  SRR4302543.4940521/94‑1 (MQ=60)
                                                                                   AATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATA            >  SRR4302543.3700597/1‑94 (MQ=60)
                                                                                   AATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATA            <  SRR4302543.5528912/94‑1 (MQ=60)
                                                                                    ATCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAA           <  SRR4302543.2132841/94‑1 (MQ=60)
                                                                                     TCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAAC          <  SRR4302543.7620451/94‑1 (MQ=60)
                                                                                     TCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAAC          >  SRR4302543.1660369/1‑94 (MQ=60)
                                                                                     TCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAAC          <  SRR4302543.4395019/94‑1 (MQ=60)
                                                                                     TCAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAAC          <  SRR4302543.5480180/94‑1 (MQ=60)
                                                                                      CAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACC         <  SRR4302543.5856275/94‑1 (MQ=60)
                                                                                      CAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACC         <  SRR4302543.2215638/94‑1 (MQ=60)
                                                                                      CAGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACC         <  SRR4302543.201461/94‑1 (MQ=60)
                                                                                       AGA‑CGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCG        >  SRR4302543.1133544/1‑94 (MQ=60)
                                                                                           cgGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCG     >  SRR4302543.7930362/3‑94 (MQ=60)
                                                                                           G‑GGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATGTATAAGCCCCGC    >  SRR4302543.345199/1‑94 (MQ=60)
                                                                                           G‑GGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGC    >  SRR4302543.4807300/1‑94 (MQ=60)
                                                                                              GGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCAT  <  SRR4302543.7503868/94‑1 (MQ=60)
                                                                                               |                                                                                            
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGA‑C‑GGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCAT  >  NC_000913/3418747‑3418932

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑