Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,454,538	T→C	N175N (AAT→AAC)	b3325 →	YheF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,454,538	0	T	C	100.0%	1051.2 / NA	324	N175N (AAT→AAC)	b3325	YheF
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (176/148); total (176/148)

Only 100 of 338 total aligned reads displayed.

CAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCT  >  NC_000913/3454449‑3454627

cAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACaaa                                                                                        <  1:3544042/93‑1 (MQ=255)

 agttgatgGATGCGGGAAGCGTCGGTAATGTTTTGCATTATAAACCCTCCAACGTTTTTATTCTGCCCGGTCGTGCCTCCACCATTAACaaat                                                                                       >  2:6009848/4‑92 (MQ=255)

 aGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAAc                                                                                       <  1:854914/93‑1 (MQ=255)

 aGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAAc                                                                                       >  2:4074714/1‑93 (MQ=255)

     gatggatgCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGAt                                                                                   <  1:2355385/93‑1 (MQ=255)

         gatgCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAACCTGATTGaa                                                                               >  2:2213244/1‑93 (MQ=255)

         gatgCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGaa                                                                               >  2:4248462/1‑93 (MQ=255)

           tgCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGt                                                                             <  2:5833608/93‑1 (MQ=255)

             cGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCa                                                                           >  2:3717439/1‑93 (MQ=255)

               ggTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATa                                                                         >  2:5423946/1‑93 (MQ=255)

                 gaGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATaaa                                                                       <  2:5879909/92‑1 (MQ=255)

                   gCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAgc                                                                     >  2:7057658/1‑93 (MQ=255)

                   gCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAgc                                                                     <  1:528410/93‑1 (MQ=255)

                    cGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAgcg                                                                    >  2:7731555/1‑93 (MQ=255)

                      tCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGcgcg                                                                  >  2:2898227/1‑93 (MQ=255)

                      tCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGcgcg                                                                  >  2:336594/1‑93 (MQ=255)

                        ggTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGtt                                                                >  1:2918886/1‑93 (MQ=255)

                        ggTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGAACGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGtt                                                                <  1:3336822/93‑1 (MQ=255)

                         gTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTg                                                               >  1:6906864/1‑93 (MQ=255)

                          tAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGa                                                              <  2:4679516/93‑1 (MQ=255)

                          tAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGa                                                              <  1:7015701/93‑1 (MQ=255)

                          tAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGa                                                              <  2:5600963/93‑1 (MQ=255)

                            aTGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATg                                                            >  1:7629238/1‑93 (MQ=255)

                            aTGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATg                                                            >  2:4396269/1‑93 (MQ=255)

                             tgttgtGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGt                                                           >  2:3640863/1‑93 (MQ=255)

                              gttgtGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTc                                                          <  1:1914961/93‑1 (MQ=255)

                                tgtgCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCAt                                                        <  1:4312546/93‑1 (MQ=255)

                                 gtgCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATc                                                       <  2:6149429/93‑1 (MQ=255)

                                 gtgCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATc                                                       >  2:5790798/1‑93 (MQ=255)

                                    cATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGc                                                    >  1:3938559/1‑93 (MQ=255)

                                      ttATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGcac                                                  <  1:2195335/93‑1 (MQ=255)

                                       tATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGcaca                                                 <  2:532859/93‑1 (MQ=255)

                                       tATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGcaca                                                 >  2:5244407/1‑93 (MQ=255)

                                       tATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGcaca                                                 <  2:6631168/93‑1 (MQ=255)

                                        aTGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACag                                                <  2:855585/93‑1 (MQ=255)

                                         tGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACaga                                               <  1:6334619/93‑1 (MQ=255)

                                         tGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACaga                                               <  2:6656827/93‑1 (MQ=255)

                                          gAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACagag                                              >  2:1205389/1‑93 (MQ=255)

                                           aaCCCGCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAgaga                                             <  2:491175/93‑1 (MQ=255)

                                              ccTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagc                                          <  1:7801853/93‑1 (MQ=255)

                                              ccTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagc                                          <  2:3224339/93‑1 (MQ=255)

                                              ccTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagc                                          <  1:2126690/93‑1 (MQ=255)

                                               cTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagca                                         >  1:3480141/1‑93 (MQ=255)

                                               cTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagca                                         <  1:7106765/93‑1 (MQ=255)

                                               cTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagca                                         <  1:1825460/93‑1 (MQ=255)

                                               cTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagca                                         <  2:5970613/93‑1 (MQ=255)

                                               cTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagca                                         >  1:2497138/1‑93 (MQ=255)

                                               cTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagca                                         >  2:5682411/1‑93 (MQ=255)

                                                tCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagcag                                        >  2:7190466/1‑93 (MQ=255)

                                                tCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagcag                                        <  2:6262980/93‑1 (MQ=255)

                                                 ccAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagcagc                                       >  1:2737401/1‑93 (MQ=255)

                                                   aaCGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCaa                                     >  1:4480896/1‑93 (MQ=255)

                                                   aaCGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCaa                                     <  2:3684924/93‑1 (MQ=255)

                                                    aCGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCaaa                                    <  1:5917226/93‑1 (MQ=255)

                                                     cGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAat                                   <  1:3068165/93‑1 (MQ=255)

                                                      gTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAatt                                  >  2:1889246/1‑93 (MQ=255)

                                                       ttCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAatta                                 >  2:4461710/1‑93 (MQ=255)

                                                       ttCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAatta                                 >  2:2103146/1‑93 (MQ=255)

                                                       ttCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAatta                                 >  1:6789683/1‑93 (MQ=255)

                                                        tCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAattat                                <  1:5182634/93‑1 (MQ=255)

                                                         cTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAattatt                               >  2:3930277/1‑93 (MQ=255)

                                                          ttATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTc                              >  1:6893282/1‑93 (MQ=255)

                                                           tATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTGATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCa                             >  1:5040321/1‑93 (MQ=255)

                                                           tATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCa                             <  1:5585624/93‑1 (MQ=255)

                                                             ttCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATc                           >  2:1528946/1‑93 (MQ=255)

                                                             ttCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATc                           >  2:6335345/1‑93 (MQ=255)

                                                              tCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCt                          >  1:6060321/1‑93 (MQ=255)

                                                              tCTGACAGGTCGTGCCGCCACCATTAACAAACTGATTGAAGTCAAAAAGAGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCt                          <  2:179018/93‑1 (MQ=255)

                                                               cTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTg                         <  2:1360045/93‑1 (MQ=255)

                                                               cTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTg                         <  1:65810/93‑1 (MQ=255)

                                                                tGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCtag                        >  1:1192757/1‑91 (MQ=255)

                                                                  aCCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGaa                      <  2:1119863/93‑1 (MQ=255)

                                                                  aCCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGaa                      >  1:7380562/1‑93 (MQ=255)

                                                                   ccGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAat                     >  1:5755027/1‑93 (MQ=255)

                                                                    cGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAata                    <  1:1426840/93‑1 (MQ=255)

                                                                    cGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAata                    <  2:1927477/93‑1 (MQ=255)

                                                                    cGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAata                    >  1:1666026/1‑93 (MQ=255)

                                                                    cGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAata                    >  1:7920657/1‑93 (MQ=255)

                                                                     ggTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAatat                   >  1:1545176/1‑93 (MQ=255)

                                                                     ggTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAatat                   >  2:3128729/1‑93 (MQ=255)

                                                                        cGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATgag                <  2:6558643/93‑3 (MQ=255)

                                                                        cGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCg                <  2:1972643/93‑1 (MQ=255)

                                                                        cGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCg                <  1:4846698/93‑1 (MQ=255)

                                                                          tGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTc              >  1:5658431/1‑93 (MQ=255)

                                                                            ccTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAg            <  1:617009/93‑1 (MQ=255)

                                                                            ccTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAg            >  2:1686916/1‑93 (MQ=255)

                                                                            ccTCCACCATTAACAAACTGATGGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAg            >  2:4980282/1‑93 (MQ=255)

                                                                             cTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGc           >  1:3771753/1‑93 (MQ=255)

                                                                              tCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCg          >  2:6870984/1‑93 (MQ=255)

                                                                              tCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCg          >  2:2607006/1‑93 (MQ=255)

                                                                               ccaccaTTACCAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCgg         <  2:3048589/93‑1 (MQ=255)

                                                                                caccaTTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGa        >  1:4711030/1‑93 (MQ=255)

                                                                                caccaTTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGa        <  1:3997232/93‑1 (MQ=255)

                                                                                caccaTTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGa        >  2:2425477/1‑93 (MQ=255)

                                                                                   caTTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGa     >  1:1943250/1‑93 (MQ=255)

                                                                                    aTTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGAt    >  2:7361456/1‑93 (MQ=255)

                                                                                     ttAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGAtc   >  1:1044668/1‑93 (MQ=255)

                                                                                     ttAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGAtc   >  1:460477/1‑93 (MQ=255)

                                                                                     ttAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGAtc   <  1:3103557/93‑1 (MQ=255)

                                                                                      taacaaACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGAtct  >  2:7429770/1‑93 (MQ=255)

CAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCT  >  NC_000913/3454449‑3454627

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTCGCC  >  NC_000913/3454445‑3454631

CCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAAC                                                                                               <  SRR4302543.5091065/94‑1 (MQ=60)

CCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAAC                                                                                               <  SRR4302543.4409267/94‑1 (MQ=60)

CCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAAC                                                                                               <  SRR4302543.7473588/94‑1 (MQ=60)

CCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAAC                                                                                               <  SRR4302543.155097/94‑1 (MQ=60)

CCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAAC                                                                                               <  SRR4302543.4409266/94‑1 (MQ=60)

  cccacggagtggatgcggggagcggcggtaaggtttttgcataataaaccctCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAA                                                                                             <  SRR4302543.2108898/42‑1 (MQ=60)

    CAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAAC                                                                                           <  SRR4302543.3575521/94‑1 (MQ=60)

    CAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAAC                                                                                           >  SRR4302543.4959997/1‑94 (MQ=60)

    CAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAAC                                                                                           >  SRR4302543.4181741/1‑94 (MQ=60)

    CAGATGATGGATGCGGGTAGCGGCGGTAATGCTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAAC                                                                                           >  SRR4302543.863537/1‑94 (MQ=60)

     AGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACT                                                                                          >  SRR4302543.1927031/1‑94 (MQ=60)

     AGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACT                                                                                          >  SRR4302543.2607549/1‑94 (MQ=60)

     AGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACT                                                                                          >  SRR4302543.4076950/1‑94 (MQ=60)

     AGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACT                                                                                          <  SRR4302543.862519/94‑1 (MQ=60)

     AGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACT                                                                                          >  SRR4302543.3289664/1‑94 (MQ=60)

         GATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATT                                                                                      <  SRR4302543.2376746/94‑1 (MQ=60)

         GATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATT                                                                                      <  SRR4302543.2376745/94‑1 (MQ=60)

           TGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGA                                                                                    <  SRR4302543.6969654/94‑1 (MQ=60)

            GGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAA                                                                                   <  SRR4302543.390018/94‑1 (MQ=60)

            GGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAA                                                                                   <  SRR4302543.931911/94‑1 (MQ=60)

              ATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGT                                                                                 <  SRR4302543.3372101/94‑1 (MQ=60)

              ATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGT                                                                                 >  SRR4302543.7707017/1‑94 (MQ=60)

              ATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACCGATTGAAGT                                                                                 >  SRR4302543.41255/1‑94 (MQ=60)

                  GGGTAGCGTCGGTAATGTTGTGTATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATA                                                                             >  SRR4302543.1514866/1‑94 (MQ=60)

                  GGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATA                                                                             >  SRR4302543.3677553/1‑94 (MQ=60)

                  GGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATA                                                                             >  SRR4302543.1184786/1‑94 (MQ=60)

                    GTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAA                                                                           >  SRR4302543.5213495/1‑94 (MQ=60)

                     TAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAG                                                                          >  SRR4302543.2803019/1‑94 (MQ=60)

                      AGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGC                                                                         <  SRR4302543.633403/94‑1 (MQ=60)

                      AGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGC                                                                         >  SRR4302543.7010883/1‑94 (MQ=60)

                       GCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCG                                                                        <  SRR4302543.7722777/94‑1 (MQ=60)

                       GCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCG                                                                        <  SRR4302543.533298/94‑1 (MQ=60)

                        CGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGC                                                                       >  SRR4302543.6970403/1‑94 (MQ=60)

                        CGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGC                                                                       >  SRR4302543.7523739/1‑94 (MQ=60)

                        CGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGC                                                                       >  SRR4302543.6970402/1‑94 (MQ=60)

                         GTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCG                                                                      >  SRR4302543.2108210/1‑94 (MQ=60)

                         GTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCG                                                                      >  SRR4302543.6957797/1‑94 (MQ=60)

                           CGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTT                                                                    >  SRR4302543.2945414/1‑94 (MQ=60)

                            GGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTG                                                                   >  SRR4302543.7194654/1‑94 (MQ=60)

                            GGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTG                                                                   >  SRR4302543.7428769/1‑94 (MQ=60)

                            GGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTG                                                                   >  SRR4302543.6971771/1‑94 (MQ=60)

                            GGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGAACGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTG                                                                   <  SRR4302543.3366886/94‑1 (MQ=60)

                              TAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGAT                                                                 <  SRR4302543.7082714/94‑1 (MQ=60)

                              TAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGAT                                                                 <  SRR4302543.826067/94‑1 (MQ=60)

                               AATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATG                                                                >  SRR4302543.7701635/1‑94 (MQ=60)

                               AATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATG                                                                >  SRR4302543.2455659/1‑94 (MQ=60)

                               AATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATG                                                                <  SRR4302543.7954871/94‑1 (MQ=60)

                                ATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGT                                                               <  SRR4302543.6206730/94‑1 (MQ=60)

                                 TGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTC                                                              >  SRR4302543.4399823/1‑94 (MQ=60)

                                  GTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCA                                                             <  SRR4302543.1932222/94‑1 (MQ=60)

                                  GTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCA                                                             >  SRR4302543.2428509/1‑94 (MQ=60)

                                   TTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCAT                                                            <  SRR4302543.6268420/94‑1 (MQ=60)

                                   TTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCAT                                                            >  SRR4302543.1089756/1‑94 (MQ=60)

                                   TTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCAT                                                            <  SRR4302543.959421/94‑1 (MQ=60)

                                    TGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATC                                                           <  SRR4302543.7332787/94‑1 (MQ=60)

                                    TGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATC                                                           <  SRR4302543.4351719/94‑1 (MQ=60)

                                       GCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGC                                                        <  SRR4302543.2340937/94‑1 (MQ=60)

                                       GCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGC                                                        >  SRR4302543.3973374/1‑94 (MQ=60)

                                        CATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCA                                                       >  SRR4302543.577842/1‑94 (MQ=60)

                                         ATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCAC                                                      <  SRR4302543.1716192/94‑1 (MQ=60)

                                          TTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACA                                                     <  SRR4302543.2215061/94‑1 (MQ=60)

                                          TTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACA                                                     <  SRR4302543.5427007/94‑1 (MQ=60)

                                           TATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAG                                                    <  SRR4302543.5271358/94‑1 (MQ=60)

                                           TATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAG                                                    <  SRR4302543.5271357/94‑1 (MQ=60)

                                           TATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAG                                                    <  SRR4302543.4823359/94‑1 (MQ=60)

                                           TATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAG                                                    >  SRR4302543.226849/1‑94 (MQ=60)

                                            ctcacCCCTCCAACGTTCTTATTCTGACCGGTCCGGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGA                                                   <  SRR4302543.432203/89‑1 (MQ=60)

                                             TGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAG                                                  <  SRR4302543.6394193/94‑1 (MQ=60)

                                             TGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAG                                                  <  SRR4302543.460786/94‑1 (MQ=60)

                                               AACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGCTTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAA                                                >  SRR4302543.7542617/1‑94 (MQ=60)

                                               AACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAA                                                <  SRR4302543.2540803/94‑1 (MQ=60)

                                               AACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAA                                                <  SRR4302543.546583/94‑1 (MQ=60)

                                               AACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAA                                                >  SRR4302543.60367/1‑94 (MQ=60)

                                                 CCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGC                                              >  SRR4302543.2952754/1‑94 (MQ=60)

                                                 CCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGC                                              <  SRR4302543.7835131/94‑1 (MQ=60)

                                                 CCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGC                                              >  SRR4302543.4562888/1‑94 (MQ=60)

                                                 CCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGC                                              <  SRR4302543.7095987/94‑1 (MQ=60)

                                                  CCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCA                                             <  SRR4302543.7875392/94‑1 (MQ=60)

                                                  CCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCA                                             >  SRR4302543.2519791/1‑94 (MQ=60)

                                                  CCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCA                                             <  SRR4302543.2145726/94‑1 (MQ=60)

                                                  CCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCA                                             >  SRR4302543.3511313/1‑94 (MQ=60)

                                                   CTCCAGCGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAG                                            <  SRR4302543.71376/94‑1 (MQ=60)

                                                   CTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAG                                            <  SRR4302543.1841848/94‑1 (MQ=60)

                                                   CTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAG                                            >  SRR4302543.1481080/1‑94 (MQ=60)

                                                   CTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAG                                            <  SRR4302543.7175801/94‑1 (MQ=60)

                                                   CTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAG                                            <  SRR4302543.1841849/94‑1 (MQ=60)

                                                    TCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGC                                           >  SRR4302543.1246190/1‑94 (MQ=60)

                                                    TCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGC                                           >  SRR4302543.2762305/1‑94 (MQ=60)

                                                    TCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGC                                           >  SRR4302543.3098449/1‑94 (MQ=60)

                                                     CCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCA                                          <  SRR4302543.4670651/94‑1 (MQ=60)

                                                      CAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAA                                         >  SRR4302543.4521584/1‑94 (MQ=60)

                                                      CAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAA                                         >  SRR4302543.1993652/1‑94 (MQ=60)

                                                       AACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAA                                        >  SRR4302543.576268/1‑94 (MQ=60)

                                                       AACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAA                                        >  SRR4302543.1945091/1‑94 (MQ=60)

                                                       AACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAA                                        <  SRR4302543.381641/94‑1 (MQ=60)

                                                        ACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAAT                                       <  SRR4302543.5971270/94‑1 (MQ=60)

                                                        ACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAAT                                       <  SRR4302543.5803894/94‑1 (MQ=60)

                                                         CGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATT                                      >  SRR4302543.5852786/1‑94 (MQ=60)

                                                         CGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATT                                      <  SRR4302543.3095758/94‑1 (MQ=60)

                                                          GTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTA                                     >  SRR4302543.1642990/1‑94 (MQ=60)

                                                          GTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTA                                     <  SRR4302543.5089270/94‑1 (MQ=60)

                                                          GTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTA                                     >  SRR4302543.6853800/1‑94 (MQ=60)

                                                          GTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTA                                     <  SRR4302543.6622627/94‑1 (MQ=60)

                                                            TCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATT                                   <  SRR4302543.5229402/94‑1 (MQ=60)

                                                             CTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTC                                  >  SRR4302543.6958082/1‑94 (MQ=60)

                                                              TTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTGATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCA                                 >  SRR4302543.5086165/1‑94 (MQ=60)

                                                              TTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCA                                 >  SRR4302543.5086164/1‑94 (MQ=60)

                                                              TTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCA                                 >  SRR4302543.1828147/1‑94 (MQ=60)

                                                               TATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCAT                                >  SRR4302543.4961657/1‑94 (MQ=60)

                                                               TATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCAT                                <  SRR4302543.5636503/94‑1 (MQ=60)

                                                               TATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCAT                                <  SRR4302543.5636504/94‑1 (MQ=60)

                                                                ATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAACGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATC                               >  SRR4302543.6016590/1‑94 (MQ=60)

                                                                ATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATC                               >  SRR4302543.1320768/1‑94 (MQ=60)

                                                                 TTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCT                              >  SRR4302543.6117695/1‑94 (MQ=60)

                                                                  TCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTG                             <  SRR4302543.6810922/94‑1 (MQ=60)

                                                                   CTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGG                            >  SRR4302543.5852916/1‑94 (MQ=60)

                                                                   CTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGG                            <  SRR4302543.66392/94‑1 (MQ=60)

                                                                   CTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTAG                            >  SRR4302543.1203514/1‑94 (MQ=60)

                                                                    TGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGA                           <  SRR4302543.3417152/94‑1 (MQ=60)

                                                                     GACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAA                          >  SRR4302543.7451502/1‑94 (MQ=60)

                                                                      ACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAAT                         >  SRR4302543.5807473/1‑94 (MQ=60)

                                                                      ACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAAT                         >  SRR4302543.82377/1‑94 (MQ=60)

                                                                      ACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAAT                         <  SRR4302543.3511356/94‑1 (MQ=60)

                                                                       CCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATA                        >  SRR4302543.7995058/1‑94 (MQ=60)

                                                                       CCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATA                        >  SRR4302543.1680946/1‑94 (MQ=60)

                                                                       CCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATA                        >  SRR4302543.4729098/1‑94 (MQ=60)

                                                                        CGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATAT                       <  SRR4302543.2210651/94‑1 (MQ=60)

                                                                        CGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATAT                       <  SRR4302543.1439748/94‑1 (MQ=60)

                                                                        CGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATAT                       <  SRR4302543.3780711/94‑1 (MQ=60)

                                                                        CGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATAT                       >  SRR4302543.1559010/1‑94 (MQ=60)

                                                                        CGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATAT                       <  SRR4302543.4630403/94‑1 (MQ=60)

                                                                        CGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATAT                       <  SRR4302543.6811394/94‑1 (MQ=60)

                                                                         GGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATG                      >  SRR4302543.6448137/1‑94 (MQ=60)

                                                                         GGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATG                      <  SRR4302543.1844302/94‑1 (MQ=60)

                                                                         GGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATG                      <  SRR4302543.3093509/94‑1 (MQ=60)

                                                                         GGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATG                      <  SRR4302543.1946510/94‑1 (MQ=60)

                                                                           TCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCG                    <  SRR4302543.3049177/94‑1 (MQ=60)

                                                                            CGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGT                   <  SRR4302543.4890895/94‑1 (MQ=60)

                                                                             GTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTC                  >  SRR4302543.5710039/1‑94 (MQ=60)

                                                                             GTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTC                  <  SRR4302543.4007304/94‑1 (MQ=60)

                                                                              TGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCA                 <  SRR4302543.7942259/94‑1 (MQ=60)

                                                                              TGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCA                 >  SRR4302543.6190440/1‑94 (MQ=60)

                                                                              GGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAAATATTCATCTGGAATATGCGTCA                 <  SRR4302543.6873541/94‑1 (MQ=60)

                                                                               GCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAG                >  SRR4302543.3200595/1‑94 (MQ=60)

                                                                                CCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGC               <  SRR4302543.622650/94‑1 (MQ=60)

                                                                                CCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGC               >  SRR4302543.3804961/1‑94 (MQ=60)

                                                                                CCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGC               >  SRR4302543.2213925/1‑94 (MQ=60)

                                                                                CCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGC               <  SRR4302543.2768057/94‑1 (MQ=60)

                                                                                 CTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCG              >  SRR4302543.156191/1‑94 (MQ=60)

                                                                                  TCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGG             >  SRR4302543.6995551/1‑94 (MQ=60)

                                                                                   CCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGA            >  SRR4302543.4754083/1‑94 (MQ=60)

                                                                                    CACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAA           <  SRR4302543.6423985/94‑1 (MQ=60)

                                                                                    CACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAA           >  SRR4302543.3096719/1‑94 (MQ=60)

                                                                                    CACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAA           >  SRR4302543.2063661/1‑94 (MQ=60)

                                                                                    CACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAA           >  SRR4302543.351826/1‑94 (MQ=60)

                                                                                    CACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAA           <  SRR4302543.4032863/94‑1 (MQ=60)

                                                                                     ACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAG          <  SRR4302543.530820/94‑1 (MQ=60)

                                                                                      CCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGA         >  SRR4302543.1960704/1‑94 (MQ=60)

                                                                                       CATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGAT        >  SRR4302543.436500/1‑94 (MQ=60)

                                                                                       CATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGAT        >  SRR4302543.3733005/1‑94 (MQ=60)

                                                                                       CATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGAT        >  SRR4302543.5683725/1‑94 (MQ=60)

                                                                                        ATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATC       >  SRR4302543.1053989/1‑94 (MQ=60)

                                                                                        ATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATC       >  SRR4302543.3299602/1‑94 (MQ=60)

                                                                                        ATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATC       >  SRR4302543.6190821/1‑94 (MQ=60)

                                                                                        ATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATC       >  SRR4302543.464762/1‑94 (MQ=60)

                                                                                         TTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCT      <  SRR4302543.3131473/94‑1 (MQ=60)

                                                                                         TTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCT      <  SRR4302543.1467742/94‑1 (MQ=60)

                                                                                          TAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTC     >  SRR4302543.5305668/1‑94 (MQ=60)

                                                                                          TAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTC     <  SRR4302543.4008353/94‑1 (MQ=60)

                                                                                          TAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTC     >  SRR4302543.5305667/1‑94 (MQ=60)

                                                                                          TAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTC     <  SRR4302543.4798091/94‑1 (MQ=60)

                                                                                           AACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTCG    <  SRR4302543.3705065/94‑1 (MQ=60)

                                                                                           AACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTCG    >  SRR4302543.6346816/1‑94 (MQ=60)

                                                                                           AACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTCG    <  SRR4302543.2561308/94‑1 (MQ=60)

                                                                                             CAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTCGCC  <  SRR4302543.5072782/94‑1 (MQ=60)

                                                                                             CAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTCGCC  >  SRR4302543.1380600/1‑94 (MQ=60)

                                                                                             CAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTCGCC  <  SRR4302543.4257300/94‑1 (MQ=60)

CCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTCGCC  >  NC_000913/3454445‑3454631

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`