Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,471,960 T→C H77R (CAC→CGC)  rpsL ← 30S ribosomal subunit protein S12

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,471,9600TC99.7% 986.2 / ‑4.9 317H77R (CAC→CGC) rpsL30S ribosomal subunit protein S12
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (140/175);  total (141/176)
Fisher's exact test for biased strand distribution p-value = 4.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.34e-01

Only 100 of 329 total aligned reads displayed.

ACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCG  >  NC_000913/3471870‑3472049
                                                                                          |                                                                                         
aCGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAgcgc                                                                                         >  1:1612653/1‑93 (MQ=255)
  gCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTc                                                                                       >  1:633261/1‑93 (MQ=255)
     ggAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTg                                                                                    >  2:4546540/1‑93 (MQ=255)
      gAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGc                                                                                   <  2:1736933/93‑1 (MQ=255)
      gAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGc                                                                                   >  2:7743076/1‑93 (MQ=255)
       aGCAGTCAAGCGCACCCCGTACGGTGTGGTAGCGAACCCCCGGGAGGTCTTCAATACGGCCGCCGCGGATCAGGATCACGGAGCCCTCCTGCa                                                                                  <  2:5179943/93‑1 (MQ=255)
          aGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGTGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGt                                                                               <  2:84211/93‑1 (MQ=255)
          aGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGt                                                                               >  2:3555051/1‑93 (MQ=255)
          aGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGt                                                                               <  1:2207479/93‑1 (MQ=255)
            tCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTtg                                                                             <  2:3962517/93‑1 (MQ=255)
              aaGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTtgtg                                                                           >  1:5663471/1‑93 (MQ=255)
              aaGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTtgtg                                                                           <  2:1893145/93‑1 (MQ=255)
               aGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGa                                                                          <  2:3122754/93‑1 (MQ=255)
                   caccacGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCtt                                                                      >  2:6135678/1‑93 (MQ=255)
                    accacGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTc                                                                     <  1:4774905/93‑1 (MQ=255)
                    accacGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTc                                                                     <  2:2834670/93‑1 (MQ=255)
                     ccacGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTca                                                                    <  2:4429294/93‑1 (MQ=255)
                         gTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTcaccac                                                                >  1:5404159/1‑93 (MQ=255)
                         gTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTcaccac                                                                <  1:2001759/93‑1 (MQ=255)
                          tACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCaccacc                                                               >  1:6405503/1‑93 (MQ=255)
                          tACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCaccacc                                                               >  1:5886525/1‑93 (MQ=255)
                            cGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGa                                                             <  1:7298885/93‑1 (MQ=255)
                             ggTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGAt                                                            >  1:1359258/1‑93 (MQ=255)
                              gtgtGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATg                                                           >  2:3399903/1‑93 (MQ=255)
                              gtgtGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATg                                                           <  2:778679/93‑1 (MQ=255)
                              gtgtGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATg                                                           >  1:1838030/1‑93 (MQ=255)
                               ggtgGTAACGAACCCCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGt                                                          <  1:856437/92‑1 (MQ=255)
                                gtgGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGGGCTCCTGCAGGTTGTGACCTTCACCACCGATGTa                                                         <  1:2066621/93‑1 (MQ=255)
                                gtgGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTa                                                         >  1:1164978/1‑93 (MQ=255)
                                gtgGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTa                                                         >  1:530198/1‑93 (MQ=255)
                                gtgGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTGGTGTCCTTCACCACCGATGTa                                                         <  2:3704440/93‑1 (MQ=255)
                                   gTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGa                                                      <  2:5256165/93‑1 (MQ=255)
                                   gTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGa                                                      <  2:5018528/93‑1 (MQ=255)
                                   gTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGACCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGa                                                      >  1:4820899/1‑93 (MQ=255)
                                    tAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGaa                                                     <  2:4227013/93‑1 (MQ=255)
                                      aCGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGt                                                   <  1:4585641/93‑1 (MQ=255)
                                       cGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTc                                                  <  2:2804923/93‑1 (MQ=255)
                                        gAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCa                                                 >  1:7334376/1‑93 (MQ=255)
                                         aaCACCGGGGAGGTCTTAAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGAACTTCACCACCGATGTAGGAAGTCAc                                                <  2:7105780/93‑1 (MQ=255)
                                          acacCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACt                                               <  2:6260169/93‑1 (MQ=255)
                                            acCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTc                                             <  2:5518856/93‑1 (MQ=255)
                                            acCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTc                                             >  2:6065296/1‑93 (MQ=255)
                                                gggAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGaaa                                         <  1:4351711/93‑1 (MQ=255)
                                                 ggAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAAc                                        <  1:1844631/93‑1 (MQ=255)
                                                 ggAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAAc                                        <  2:1161650/93‑1 (MQ=255)
                                                 ggAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAAc                                        <  1:5135295/93‑1 (MQ=255)
                                                 ggAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAAc                                        >  1:23665/1‑93 (MQ=255)
                                                  gAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAAcc                                       >  2:3425351/1‑93 (MQ=255)
                                                    ggTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGt                                     >  2:2274007/1‑93 (MQ=255)
                                                     gTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGtt                                    >  2:3285476/1‑93 (MQ=255)
                                                      tCTTTAACACGACCGCCCCGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTa                                   >  1:4168881/1‑93 (MQ=255)
                                                      tCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTa                                   <  1:2576171/93‑1 (MQ=255)
                                                       cTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAg                                  >  1:2751763/1‑93 (MQ=255)
                                                        tttAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGCAGTCACTTCGAAACCGTTAGt                                 >  2:1368547/1‑93 (MQ=255)
                                                        tttAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGGAACCGTTAGt                                 >  2:5643742/1‑93 (MQ=255)
                                                        tttAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGt                                 >  1:5578551/1‑93 (MQ=255)
                                                        tttAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGt                                 >  1:3261614/1‑93 (MQ=255)
                                                        tttAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGt                                 >  1:4697058/1‑93 (MQ=255)
                                                        tttAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGt                                 >  1:4888224/1‑93 (MQ=255)
                                                        tttAACACAACCGCCACGGATCAGGATCACGGAGCTCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGTAATTCTCTTCGAAACCGTTAGt                                 <  2:4778138/93‑1 (MQ=255)
                                                         ttAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTc                                >  2:1218112/1‑93 (MQ=255)
                                                         ttAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTc                                <  2:5875227/93‑1 (MQ=255)
                                                         ttAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTc                                <  1:7566632/93‑1 (MQ=255)
                                                            acacGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGa                             <  1:768352/93‑1 (MQ=255)
                                                            acacGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGa                             <  1:3045989/93‑1 (MQ=255)
                                                            acacGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGa                             <  2:4915385/93‑1 (MQ=255)
                                                            acacCACCGCCACGGATCAGNNTNCCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGa                             <  1:2516882/93‑1 (MQ=255)
                                                             cgcGACCGCCACGGATCCGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGAc                            <  2:2529805/91‑1 (MQ=255)
                                                             cacGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGAc                            <  1:3928750/93‑1 (MQ=255)
                                                             cacGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGAc                            >  2:7334166/1‑93 (MQ=255)
                                                               cGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGa                          <  1:1031136/93‑1 (MQ=255)
                                                               cGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGa                          >  1:4497891/1‑93 (MQ=255)
                                                                gACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGaa                         >  1:35133/1‑93 (MQ=255)
                                                                 aCCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAac                        <  1:5361734/93‑1 (MQ=255)
                                                                 aCCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAac                        <  2:65043/93‑1 (MQ=255)
                                                                  ccGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAaca                       <  2:5776776/93‑1 (MQ=255)
                                                                    gCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACg                     >  2:6806948/1‑93 (MQ=255)
                                                                        cGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGACTACGGCAt                 >  2:5066788/1‑93 (MQ=255)
                                                                        cGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCAt                 <  1:3394485/93‑1 (MQ=255)
                                                                          gatcaggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATAc               <  1:6918709/93‑1 (MQ=255)
                                                                           atcaggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACt              <  2:5144955/93‑1 (MQ=255)
                                                                           atcaggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACt              <  2:5992753/93‑1 (MQ=255)
                                                                            tcaggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACtt             >  2:6690817/1‑93 (MQ=255)
                                                                            tcaggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACtt             <  1:3674861/93‑1 (MQ=255)
                                                                            tcaggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACtt             >  1:781961/1‑93 (MQ=255)
                                                                             caggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACttt            <  2:2584929/93‑1 (MQ=255)
                                                                              aggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTa           <  1:2863154/93‑1 (MQ=255)
                                                                              aggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTa           <  2:6205616/93‑1 (MQ=255)
                                                                               ggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTAc          <  1:6851306/93‑1 (MQ=255)
                                                                               ggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTAc          <  2:7478853/93‑1 (MQ=255)
                                                                                 atcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACGCGGCATACTTTACGc        >  2:6321990/1‑93 (MQ=255)
                                                                                 atcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGc        <  2:3811164/93‑1 (MQ=255)
                                                                                 atcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGc        <  1:5790654/93‑1 (MQ=255)
                                                                                    aCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAgc     <  2:7400706/93‑1 (MQ=255)
                                                                                    aCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAgc     <  2:4866037/93‑1 (MQ=255)
                                                                                     cGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAgcg    >  1:7188011/1‑93 (MQ=255)
                                                                                     cGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAgcg    <  1:5961669/93‑1 (MQ=255)
                                                                                     cGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACAGTTAGTCAGACGAACACGGCATACTTTACGCAgcg    >  2:5364783/1‑93 (MQ=255)
                                                                                      ggAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACTGCATACTTTACGCAgcgc   >  1:6020851/1‑93 (MQ=255)
                                                                                       gAGCGCGCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGcgcg  <  2:7707541/93‑1 (MQ=255)
                                                                                          |                                                                                         
ACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCG  >  NC_000913/3471870‑3472049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGT  >  NC_000913/3471867‑3472053
                                                                                             |                                                                                             
TTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGC                                                                                               <  SRR4302543.6966084/94‑1 (MQ=60)
TTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGC                                                                                               <  SRR4302543.7675481/94‑1 (MQ=60)
 TAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCG                                                                                              >  SRR4302543.6377205/1‑94 (MQ=60)
 TAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCG                                                                                              >  SRR4302543.674019/1‑94 (MQ=60)
 TAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCG                                                                                              <  SRR4302543.20073/94‑1 (MQ=60)
  AACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGC                                                                                             >  SRR4302543.1627034/1‑94 (MQ=60)
   ACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCT                                                                                            <  SRR4302543.6946881/94‑1 (MQ=60)
    CGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTC                                                                                           >  SRR4302543.639049/1‑94 (MQ=60)
    CGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTC                                                                                           >  SRR4302543.3390509/1‑94 (MQ=60)
     GCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGCCCGCCACGGATCAGGATCACGGAGTGCTCC                                                                                          >  SRR4302543.5048881/1‑94 (MQ=60)
      CCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCT                                                                                         >  SRR4302543.6141729/1‑94 (MQ=60)
       CGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTG                                                                                        >  SRR4302543.6807896/1‑94 (MQ=60)
        GGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGC                                                                                       <  SRR4302543.5447398/94‑1 (MQ=60)
        GGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGC                                                                                       >  SRR4302543.2358904/1‑94 (MQ=60)
          AGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAG                                                                                     >  SRR4302543.7218707/1‑94 (MQ=60)
          AGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAG                                                                                     >  SRR4302543.176988/1‑94 (MQ=60)
          AGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAG                                                                                     >  SRR4302543.3982250/1‑94 (MQ=60)
            CAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGT                                                                                   >  SRR4302543.7197766/1‑94 (MQ=60)
            CAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGT                                                                                   >  SRR4302543.6234872/1‑94 (MQ=60)
             AGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTT                                                                                  >  SRR4302543.2739300/1‑94 (MQ=60)
             AGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTT                                                                                  <  SRR4302543.4742459/94‑1 (MQ=60)
             AGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTT                                                                                  <  SRR4302543.2227366/94‑1 (MQ=60)
             AGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTT                                                                                  >  SRR4302543.4731925/1‑94 (MQ=60)
              NNNAAGCNCNCCACGTACGGNNNNGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTG                                                                                 <  SRR4302543.1471220/94‑1 (MQ=60)
              GTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTG                                                                                 <  SRR4302543.7995237/94‑1 (MQ=60)
              GTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTG                                                                                 >  SRR4302543.463349/1‑94 (MQ=60)
              GTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTG                                                                                 >  SRR4302543.7778309/1‑94 (MQ=60)
               TCAAGGGCCCCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGT                                                                                <  SRR4302543.2653127/94‑1 (MQ=60)
                CAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTG                                                                               >  SRR4302543.5957495/1‑94 (MQ=60)
                CAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTG                                                                               >  SRR4302543.5715131/1‑94 (MQ=60)
                 AAGCGCACCGCGTGCGGTGTGGTAACGAACGCCCGGGAGGTC‑TTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGAT                                                                             <  SRR4302543.6025494/94‑1 (MQ=60)
                 AAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGA                                                                              >  SRR4302543.106312/1‑94 (MQ=60)
                    CGCACCACGTACGGTGTGGTAACGAACACCCGGAAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTTCTGCAGGTTGTGACCT                                                                           >  SRR4302543.157150/1‑94 (MQ=60)
                     GCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTT                                                                          <  SRR4302543.1242855/94‑1 (MQ=60)
                      CACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTC                                                                         >  SRR4302543.3053342/1‑94 (MQ=60)
                      CACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTC                                                                         >  SRR4302543.5323064/1‑94 (MQ=60)
                       CCCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCA                                                                        <  SRR4302543.1879759/94‑1 (MQ=60)
                       ACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCA                                                                        <  SRR4302543.4818549/94‑1 (MQ=60)
                        CCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCAC                                                                       <  SRR4302543.1301867/94‑1 (MQ=60)
                         CACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACC                                                                      >  SRR4302543.5335255/1‑94 (MQ=60)
                         CACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACC                                                                      <  SRR4302543.7285760/94‑1 (MQ=60)
                         CACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACC                                                                      <  SRR4302543.4603285/94‑1 (MQ=60)
                         CACGTACGGTGTGGTAACGAACACCCGGGAGGGCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACC                                                                      >  SRR4302543.5862071/1‑94 (MQ=60)
                          CCGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCA                                                                     <  SRR4302543.7381456/94‑1 (MQ=60)
                          ACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCC                                                                     >  SRR4302543.711689/1‑94 (MQ=60)
                          ACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCA                                                                     >  SRR4302543.5567992/1‑94 (MQ=60)
                           CGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCAC                                                                    >  SRR4302543.5453290/1‑94 (MQ=60)
                            GTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACC                                                                   <  SRR4302543.2037789/94‑1 (MQ=60)
                            GTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACC                                                                   >  SRR4302543.6465829/1‑94 (MQ=60)
                            GTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACC                                                                   >  SRR4302543.5940183/1‑94 (MQ=60)
                            GTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACC                                                                   <  SRR4302543.2019733/94‑1 (MQ=60)
                             TACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCG                                                                  <  SRR4302543.3576052/94‑1 (MQ=60)
                               CGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGAT                                                                <  SRR4302543.7369295/94‑1 (MQ=60)
                               CGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGAT                                                                <  SRR4302543.5726209/94‑1 (MQ=60)
                               CGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGAT                                                                >  SRR4302543.1371429/1‑94 (MQ=60)
                               CGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGAT                                                                >  SRR4302543.4919053/1‑94 (MQ=60)
                                GGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATG                                                               >  SRR4302543.7550948/1‑94 (MQ=60)
                                GGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATG                                                               >  SRR4302543.1854562/1‑94 (MQ=60)
                                  TGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTA                                                             >  SRR4302543.535106/1‑94 (MQ=60)
                                  TGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTA                                                             <  SRR4302543.4826560/94‑1 (MQ=60)
                                  TGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTA                                                             >  SRR4302543.1175574/1‑94 (MQ=60)
                                  GGTGGTAACGAACCCCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTA                                                             <  SRR4302543.864063/94‑1 (MQ=60)
                                   GTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGGGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAG                                                            <  SRR4302543.2085098/94‑1 (MQ=60)
                                   GTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAG                                                            <  SRR4302543.3418611/94‑1 (MQ=60)
                                   GTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAG                                                            <  SRR4302543.878038/94‑1 (MQ=60)
                                   GTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAG                                                            <  SRR4302543.4888522/94‑1 (MQ=60)
                                    TGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGG                                                           <  SRR4302543.3040621/94‑1 (MQ=60)
                                    TGGTAACGAACACCCGGGAGGGCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGG                                                           >  SRR4302543.5522668/1‑94 (MQ=60)
                                     GGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGA                                                          >  SRR4302543.5875972/1‑94 (MQ=60)
                                     GGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGACCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGA                                                          >  SRR4302543.4864906/1‑94 (MQ=60)
                                       TAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAG                                                        >  SRR4302543.7842692/1‑94 (MQ=60)
                                       GAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAG                                                        <  SRR4302543.2032781/94‑1 (MQ=60)
                                         ACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTC                                                      <  SRR4302543.4627298/94‑1 (MQ=60)
                                         ACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTC                                                      <  SRR4302543.5647321/94‑1 (MQ=60)
                                          CGAACCCCCGGGAGGTCTTTAACGCGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCA                                                     <  SRR4302543.2378037/94‑1 (MQ=60)
                                          CGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCA                                                     <  SRR4302543.7318509/94‑1 (MQ=60)
                                          CGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCA                                                     >  SRR4302543.7404946/1‑94 (MQ=60)
                                           GAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCAC                                                    <  SRR4302543.2501934/94‑1 (MQ=60)
                                            AACACCCGGGAGTTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACT                                                   <  SRR4302543.984302/94‑1 (MQ=60)
                                              CACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTC                                                 <  SRR4302543.3882639/94‑1 (MQ=60)
                                              CACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTC                                                 <  SRR4302543.2468952/94‑1 (MQ=60)
                                                   GGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAAC                                            <  SRR4302543.4391153/94‑1 (MQ=60)
                                                   GGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAAC                                            >  SRR4302543.7493304/1‑94 (MQ=60)
                                                   GGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAAC                                            >  SRR4302543.23881/1‑94 (MQ=60)
                                                    GGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACC                                           <  SRR4302543.5181713/94‑1 (MQ=60)
                                                    GGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACC                                           <  SRR4302543.1861219/94‑1 (MQ=60)
                                                      AGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGT                                         >  SRR4302543.427976/1‑94 (MQ=60)
                                                      AGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGT                                         >  SRR4302543.164780/1‑94 (MQ=60)
                                                       GGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTT                                        >  SRR4302543.5152307/1‑94 (MQ=60)
                                                       GGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTT                                        >  SRR4302543.6821909/1‑94 (MQ=60)
                                                       GGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTT                                        >  SRR4302543.3523379/1‑94 (MQ=60)
                                                       GGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTT                                        >  SRR4302543.2142051/1‑94 (MQ=60)
                                                        GTCTTTAACACGACCGCCCCGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTA                                       >  SRR4302543.4206635/1‑94 (MQ=60)
                                                        GTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTA                                       >  SRR4302543.4206636/1‑94 (MQ=60)
                                                         TCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAG                                      <  SRR4302543.2599649/94‑1 (MQ=60)
                                                         TCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAG                                      <  SRR4302543.160371/94‑1 (MQ=60)
                                                         TCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAG                                      >  SRR4302543.2776793/1‑94 (MQ=60)
                                                         TCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAG                                      >  SRR4302543.2776792/1‑94 (MQ=60)
                                                          CTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGT                                     >  SRR4302543.4932776/1‑94 (MQ=60)
                                                          CTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGT                                     >  SRR4302543.4843857/1‑94 (MQ=60)
                                                          CTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGT                                     >  SRR4302543.5629337/1‑94 (MQ=60)
                                                          CTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGT                                     <  SRR4302543.4779586/94‑1 (MQ=60)
                                                          CTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGT                                     >  SRR4302543.4739955/1‑94 (MQ=60)
                                                          CTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGT                                     >  SRR4302543.3681230/1‑94 (MQ=60)
                                                          CTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGT                                     <  SRR4302543.2158610/94‑1 (MQ=60)
                                                          CTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGT                                     >  SRR4302543.3291093/1‑94 (MQ=60)
                                                           TTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTA                                    >  SRR4302543.4759829/1‑94 (MQ=60)
                                                            TTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCA                                   <  SRR4302543.7638634/94‑1 (MQ=60)
                                                             TAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAG                                  <  SRR4302543.3611006/94‑1 (MQ=60)
                                                              AACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGA                                 >  SRR4302543.7743645/1‑94 (MQ=60)
                                                               ACACGCCCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAACCCGTTAGTCAGAC                                <  SRR4302543.3863339/94‑1 (MQ=60)
                                                               ACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGAC                                <  SRR4302543.3073448/94‑1 (MQ=60)
                                                               ACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGAC                                <  SRR4302543.434561/94‑1 (MQ=60)
                                                               ACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGAC                                <  SRR4302543.775103/94‑1 (MQ=60)
                                                               ACACCACCGCCACGGATCAGNNTNCCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGAC                                <  SRR4302543.2539744/94‑1 (MQ=60)
                                                                CACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACG                               <  SRR4302543.3963428/94‑1 (MQ=60)
                                                                CACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACG                               >  SRR4302543.4171589/1‑94 (MQ=60)
                                                                CACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACG                               <  SRR4302543.2575214/94‑1 (MQ=60)
                                                                 ACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGA                              >  SRR4302543.4538773/1‑94 (MQ=60)
                                                                 ACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGA                              <  SRR4302543.6289162/94‑1 (MQ=60)
                                                                  CGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAA                             <  SRR4302543.1040284/94‑1 (MQ=60)
                                                                  CGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAA                             >  SRR4302543.35455/1‑94 (MQ=60)
                                                                  CGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAA                             <  SRR4302543.1798848/94‑1 (MQ=60)
                                                                   GACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAAC                            >  SRR4302543.1858361/1‑94 (MQ=60)
                                                                   GACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAAC                            >  SRR4302543.1857556/1‑94 (MQ=60)
                                                                    ACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACA                           <  SRR4302543.5410258/94‑1 (MQ=60)
                                                                     CCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACAC                          >  SRR4302543.254870/1‑94 (MQ=60)
                                                                      CGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACG                         <  SRR4302543.3110815/94‑1 (MQ=60)
                                                                      CGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACG                         <  SRR4302543.7921979/94‑1 (MQ=60)
                                                                      CGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACG                         <  SRR4302543.5397913/94‑1 (MQ=60)
                                                                      CGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACG                         <  SRR4302543.5397914/94‑1 (MQ=60)
                                                                       GCCATGGAACAGGAGCACGGAGCGCTCCAGCAGGTTGTGACCTTCTCCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGG                        <  SRR4302543.1045532/94‑1 (MQ=60)
                                                                       GCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGG                        <  SRR4302543.440787/94‑1 (MQ=60)
                                                                       GCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGG                        <  SRR4302543.5412133/94‑1 (MQ=60)
                                                                       GCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGG                        >  SRR4302543.6973752/1‑94 (MQ=60)
                                                                         CACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCA                      >  SRR4302543.6023382/1‑94 (MQ=60)
                                                                         CACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCA                      >  SRR4302543.5656144/1‑94 (MQ=60)
                                                                         CACGGATCAGGATCACGGAGCGCTCCTGCAGGTGGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCA                      <  SRR4302543.7700702/94‑1 (MQ=60)
                                                                          CCGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCAT                     <  SRR4302543.590955/94‑1 (MQ=60)
                                                                          ACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCAT                     <  SRR4302543.3248825/94‑1 (MQ=60)
                                                                           CGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATA                    <  SRR4302543.6405085/94‑1 (MQ=60)
                                                                           CGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATA                    <  SRR4302543.3424919/94‑1 (MQ=60)
                                                                           CGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATA                    <  SRR4302543.26880/94‑1 (MQ=60)
                                                                             GATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACT                  <  SRR4302543.6983752/94‑1 (MQ=60)
                                                                              ATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTT                 >  SRR4302543.788839/1‑94 (MQ=60)
                                                                               TCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTT                <  SRR4302543.3707130/94‑1 (MQ=60)
                                                                                CAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTA               >  SRR4302543.2813000/1‑94 (MQ=60)
                                                                                CAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTA               <  SRR4302543.2063399/94‑1 (MQ=60)
                                                                                 AGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTAC              <  SRR4302543.2889257/94‑1 (MQ=60)
                                                                                  GGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACG             <  SRR4302543.6402312/94‑1 (MQ=60)
                                                                                  GGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACG             <  SRR4302543.3541571/94‑1 (MQ=60)
                                                                                  GGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACG             <  SRR4302543.6915928/94‑1 (MQ=60)
                                                                                   GATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGC            <  SRR4302543.2556224/94‑1 (MQ=60)
                                                                                    ATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCA           <  SRR4302543.5843341/94‑1 (MQ=60)
                                                                                     TCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAG          <  SRR4302543.7397421/94‑1 (MQ=60)
                                                                                     TCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAG          >  SRR4302543.1866423/1‑94 (MQ=60)
                                                                                     TCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAG          >  SRR4302543.5814820/1‑94 (MQ=60)
                                                                                     TCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAG          <  SRR4302543.4562373/94‑1 (MQ=60)
                                                                                       ACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCG        <  SRR4302543.449099/94‑1 (MQ=60)
                                                                                       ACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCG        <  SRR4302543.753940/94‑1 (MQ=60)
                                                                                       ACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCG        <  SRR4302543.5510833/94‑1 (MQ=60)
                                                                                       ACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCG        <  SRR4302543.5962233/94‑1 (MQ=60)
                                                                                       ACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCG        >  SRR4302543.7257739/1‑94 (MQ=60)
                                                                                        CGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACTGCATACTTTACGCAGCGC       >  SRR4302543.6076690/1‑94 (MQ=60)
                                                                                        CGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGC       <  SRR4302543.6016254/94‑1 (MQ=60)
                                                                                        CGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGC       <  SRR4302543.5107559/94‑1 (MQ=60)
                                                                                         GGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCG      >  SRR4302543.3017517/1‑94 (MQ=60)
                                                                                           AGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGA    <  SRR4302543.5007153/94‑1 (MQ=60)
                                                                                           AGCGCTCCTGCAGGTTGTGACCTTCACAACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACTGCATACTTTCCGCAGCGCGGG    >  SRR4302543.1512301/1‑94 (MQ=60)
                                                                                            GCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAG   >  SRR4302543.3241956/1‑94 (MQ=60)
                                                                                             CGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGT  >  SRR4302543.6281786/1‑94 (MQ=60)
                                                                                             CGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGAAGAACACGGCATACTTTACGCAGCGCGGAGT  <  SRR4302543.1732559/94‑1 (MQ=60)
                                                                                             |                                                                                             
TTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGT  >  NC_000913/3471867‑3472053

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑