Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,490,327	T→C	P41P (CCT→CCC)	yhfC →	putative transport

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,490,327	0	T	C	99.7%	1072.7 / ‑5.3	341	P41P (CCT→CCC)	yhfC	putative transport
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (169/171); total (170/171)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.65e-01

Only 100 of 352 total aligned reads displayed.

GATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCC  >  NC_000913/3490237‑3490416

 aTTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGtt                                                                                        >  2:3750428/1‑93 (MQ=255)

 aTTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGtt                                                                                        <  1:2271059/93‑1 (MQ=255)

  ttAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGttt                                                                                       <  1:1305596/93‑1 (MQ=255)

   tAGCTTTCTCTGCTACGCACTGACTGGTTCGTTGGTTATTGTCACCGGGATGGTCATGGGCAATATCGCCGATTATTTCAATCTGCCCGTTTc                                                                                      >  2:2809253/1‑93 (MQ=255)

     gCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCa                                                                                    >  1:3506687/1‑93 (MQ=255)

     gCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGACGATTATTTCAATCTGCCCGTTTCCa                                                                                    >  1:299305/1‑93 (MQ=255)

        ttCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTa                                                                                 <  2:6364872/93‑1 (MQ=255)

         tctctcCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTAt                                                                                <  2:192390/93‑1 (MQ=255)

          ctctcCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATg                                                                               <  2:2002721/93‑1 (MQ=255)

           tctcCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGa                                                                              <  1:7698736/93‑1 (MQ=255)

            ctcCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAg                                                                             <  2:7452875/93‑1 (MQ=255)

             tcCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGt                                                                            <  1:5142713/93‑1 (MQ=255)

             tcCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGt                                                                            >  1:6695350/1‑93 (MQ=255)

             tcCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGt                                                                            >  2:475100/1‑93 (MQ=255)

              ccTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTa                                                                           <  2:7139791/93‑1 (MQ=255)

               cTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTaa                                                                          <  1:1245091/93‑1 (MQ=255)

               cTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTaa                                                                          <  1:2736309/93‑1 (MQ=255)

               cTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTaa                                                                          >  2:5386586/1‑93 (MQ=255)

               cTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTaa                                                                          <  2:5859939/93‑1 (MQ=255)

                tACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAAt                                                                         >  1:7137851/1‑93 (MQ=255)

                tACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAAt                                                                         <  1:3202940/93‑1 (MQ=255)

                 aCGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATa                                                                        <  1:6251017/93‑1 (MQ=255)

                 aCGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATa                                                                        >  2:7501591/1‑93 (MQ=255)

                 aCGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATa                                                                        <  2:680235/93‑1 (MQ=255)

                  cGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATac                                                                       >  1:2942561/1‑93 (MQ=255)

                   gctctgactgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGCTTCCAGTATGAGTAATacc                                                                      >  2:7021696/4‑93 (MQ=255)

                    cACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATacct                                                                     >  1:2183005/1‑93 (MQ=255)

                     actgactgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGTGTAATacctt                                                                    >  2:1282465/1‑93 (MQ=255)

                     actgactgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATacctt                                                                    <  1:6706757/93‑1 (MQ=255)

                      ctgactgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTGTGAGTAATaccttc                                                                   <  2:1171199/93‑1 (MQ=255)

                      ctgactgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttc                                                                   <  2:4101521/93‑1 (MQ=255)

                      ctgactgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttc                                                                   <  1:6186275/93‑1 (MQ=255)

                      ctgactgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttc                                                                   >  2:6030298/1‑93 (MQ=255)

                       tgactgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttca                                                                  >  2:4621320/1‑93 (MQ=255)

                        gactgGTGCGTTGGTGATTGTCGCCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcac                                                                 <  1:2037304/93‑1 (MQ=255)

                         actgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcacc                                                                <  1:1759220/93‑1 (MQ=255)

                           tgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcacctt                                                              <  1:1175186/93‑1 (MQ=255)

                            ggTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcaccttc                                                             <  1:145467/93‑1 (MQ=255)

                             gTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTcc                                                            >  1:7212728/1‑93 (MQ=255)

                              tGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCt                                                           >  2:3516261/1‑93 (MQ=255)

                               gCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTc                                                          >  1:5905616/1‑93 (MQ=255)

                               gCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTc                                                          >  1:6077373/1‑93 (MQ=255)

                                 gTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCaa                                                        <  2:5283918/93‑1 (MQ=255)

                                   tGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACg                                                      <  2:6085467/93‑1 (MQ=255)

                                   tGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACg                                                      >  2:888655/1‑93 (MQ=255)

                                     gTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGcc                                                    >  2:2202898/1‑93 (MQ=255)

                                        aTTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGc                                                 >  1:4236591/1‑93 (MQ=255)

                                             cACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCAtttt                                            <  2:5554629/93‑1 (MQ=255)

                                             cACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCAtttt                                            <  2:3152544/93‑1 (MQ=255)

                                              aCCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTa                                           <  2:1051141/93‑1 (MQ=255)

                                               ccGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTaa                                          >  2:551174/1‑93 (MQ=255)

                                                  ggATGGTGATGGGAAATATCGCCTATTATTTCAATCTGCCCGTTTCCAGGATGATGAATACGTGCACATTCCTCACCGCCGCCATTTTAAtcc                                       >  1:6479037/1‑92 (MQ=255)

                                                    aTGGGGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGCCATTTTAATctct                                     >  2:848899/1‑93 (MQ=255)

                                                      ggTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTAt                                   >  2:5040409/1‑93 (MQ=255)

                                                       gTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATc                                  <  1:1118678/93‑1 (MQ=255)

                                                       gTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATc                                  <  2:4340226/93‑1 (MQ=255)

                                                           tGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTcc                              >  2:3057232/1‑93 (MQ=255)

                                                           tGGGAAATATCGCCGATTATTTCAATATGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTct                              >  2:2725553/1‑92 (MQ=255)

                                                              gAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCa                           >  2:6842683/1‑93 (MQ=255)

                                                               aaaTATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCaa                          <  2:4536225/93‑1 (MQ=255)

                                                                aaTATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAAc                         >  2:2580580/1‑93 (MQ=255)

                                                                aaTATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAAc                         >  1:6888424/1‑93 (MQ=255)

                                                                aaTATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAAc                         <  1:7776819/93‑1 (MQ=255)

                                                                 atatCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACg                        >  1:7322359/1‑93 (MQ=255)

                                                                  tatCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGc                       >  1:2435692/1‑93 (MQ=255)

                                                                  tatCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGc                       <  1:4969882/93‑1 (MQ=255)

                                                                  tatCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGc                       >  2:3856486/1‑93 (MQ=255)

                                                                  tatCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGc                       >  1:3064781/1‑93 (MQ=255)

                                                                   atCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGcc                      <  1:3574928/93‑1 (MQ=255)

                                                                   atCGCCGATTAGTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCCTCCTCAACGcc                      <  2:7704081/93‑1 (MQ=255)

                                                                    tCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCCACGCCt                     >  2:2475019/1‑93 (MQ=255)

                                                                    tCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCt                     <  1:1841120/93‑1 (MQ=255)

                                                                    tCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCt                     >  2:4420602/1‑93 (MQ=255)

                                                                    tCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCt                     >  2:6210754/1‑93 (MQ=255)

                                                                     cGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATATTAATCTCTATCTTCCTCAACGCCTg                    >  1:265130/1‑93 (MQ=255)

                                                                       ccGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGc                  >  1:6608433/1‑93 (MQ=255)

                                                                       ccGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGc                  <  1:255485/93‑1 (MQ=255)

                                                                       ccGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGc                  <  1:1909977/93‑1 (MQ=255)

                                                                         gATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTg                >  1:1067632/1‑93 (MQ=255)

                                                                         gATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTg                >  2:2304374/1‑93 (MQ=255)

                                                                          attattTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGa               >  1:3934630/1‑93 (MQ=255)

                                                                          attattTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGa               <  1:4734627/93‑1 (MQ=255)

                                                                          attattTCAATCTGCCCGTTTCCAGCATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGa               <  2:1392401/93‑1 (MQ=255)

                                                                           ttattTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGAt              <  1:4054877/93‑1 (MQ=255)

                                                                           ttattTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGAt              <  1:3293502/93‑1 (MQ=255)

                                                                             ttttCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATgg            <  2:1600520/92‑1 (MQ=255)

                                                                             attTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATgg            <  2:2927430/93‑1 (MQ=255)

                                                                             attTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATgg            >  1:5519933/1‑93 (MQ=255)

                                                                             attTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATgg            <  1:3662270/93‑1 (MQ=255)

                                                                              tttCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGa           <  1:5217672/93‑1 (MQ=255)

                                                                                tCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGaaa         <  1:4609957/93‑1 (MQ=255)

                                                                                 cAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAAt        <  2:1674852/93‑1 (MQ=255)

                                                                                 cAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAAt        <  2:2107675/93‑1 (MQ=255)

                                                                                 cAATCGGCCCGTTGCCAGTATGAGTAATACCTTCCCCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAAt        <  1:4621322/93‑1 (MQ=255)

                                                                                  aaTCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATc       >  1:5840753/1‑93 (MQ=255)

                                                                                   aTCTGCCCGTTGCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCg      <  1:6967437/93‑1 (MQ=255)

                                                                                    tCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGt     >  1:3335020/1‑93 (MQ=255)

                                                                                     cTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTc    <  2:655590/93‑1 (MQ=255)

                                                                                      tGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTcc   >  2:2454369/1‑93 (MQ=255)

                                                                                       gCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTccc  >  1:432926/1‑93 (MQ=255)

GATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCC  >  NC_000913/3490237‑3490416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTG  >  NC_000913/3490234‑3490420

ATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCC                                                                                               >  SRR4302543.6419581/1‑94 (MQ=60)

ATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCC                                                                                               <  SRR4302543.1931027/94‑1 (MQ=60)

ATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCC                                                                                               <  SRR4302543.3428321/94‑1 (MQ=60)

ATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCC                                                                                               >  SRR4302543.697782/1‑94 (MQ=60)

ATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCC                                                                                               >  SRR4302543.2794490/1‑94 (MQ=60)

 TGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCG                                                                                              <  SRR4302543.1706480/94‑1 (MQ=60)

  GGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGT                                                                                             >  SRR4302543.1105217/1‑94 (MQ=60)

   GATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTT                                                                                            >  SRR4302543.7414118/1‑94 (MQ=60)

   GATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTT                                                                                            >  SRR4302543.1799951/1‑94 (MQ=60)

   GATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTT                                                                                            >  SRR4302543.2424295/1‑94 (MQ=60)

    ATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTT                                                                                           >  SRR4302543.224456/1‑94 (MQ=60)

    ATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTT                                                                                           <  SRR4302543.2291812/94‑1 (MQ=60)

     TTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTC                                                                                          <  SRR4302543.1317193/94‑1 (MQ=60)

      TAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCC                                                                                         >  SRR4302543.6842909/1‑94 (MQ=60)

      TAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCC                                                                                         >  SRR4302543.3591628/1‑94 (MQ=60)

       AGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCA                                                                                        >  SRR4302543.3538035/1‑94 (MQ=60)

       AGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCA                                                                                        >  SRR4302543.255266/1‑94 (MQ=60)

       AGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGACGATTATTTCAATCTGCCCGTTTCCA                                                                                        >  SRR4302543.301991/1‑94 (MQ=60)

        GCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAG                                                                                       <  SRR4302543.3128020/94‑1 (MQ=60)

        GCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAG                                                                                       <  SRR4302543.679031/94‑1 (MQ=60)

           TTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTAT                                                                                    >  SRR4302543.1429551/1‑94 (MQ=60)

           TTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTAT                                                                                    >  SRR4302543.191918/1‑94 (MQ=60)

           TTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTAT                                                                                    <  SRR4302543.1139324/94‑1 (MQ=60)

             CTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTCTGA                                                                                  >  SRR4302543.2132268/1‑94 (MQ=60)

             CTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGA                                                                                  <  SRR4302543.4257991/94‑1 (MQ=60)

              TCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAG                                                                                 <  SRR4302543.7771604/94‑1 (MQ=60)

               CTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGT                                                                                >  SRR4302543.6758543/1‑94 (MQ=60)

               CTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGT                                                                                >  SRR4302543.6758544/1‑94 (MQ=60)

               CTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGT                                                                                >  SRR4302543.1223824/1‑94 (MQ=60)

                TCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTA                                                                               <  SRR4302543.5189211/94‑1 (MQ=60)

                TCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTA                                                                               >  SRR4302543.2725523/1‑94 (MQ=60)

                 CCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAA                                                                              <  SRR4302543.3310674/94‑1 (MQ=60)

                  CTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAAT                                                                             <  SRR4302543.2761206/94‑1 (MQ=60)

                  CTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAAT                                                                             >  SRR4302543.7207209/1‑94 (MQ=60)

                  CTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAAT                                                                             <  SRR4302543.1256268/94‑1 (MQ=60)

                  CTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAAT                                                                             >  SRR4302543.218793/1‑94 (MQ=60)

                  CTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAAT                                                                             >  SRR4302543.5357334/1‑94 (MQ=60)

                   TACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATA                                                                            <  SRR4302543.4008211/94‑1 (MQ=60)

                   TACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATA                                                                            <  SRR4302543.3231828/94‑1 (MQ=60)

                    ACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATAC                                                                           >  SRR4302543.1956437/1‑94 (MQ=60)

                    ACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATAC                                                                           >  SRR4302543.2969278/1‑94 (MQ=60)

                    ACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATAC                                                                           <  SRR4302543.6309984/94‑1 (MQ=60)

                    ACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATAC                                                                           <  SRR4302543.6267402/94‑1 (MQ=60)

                      GCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCT                                                                         <  SRR4302543.3714098/94‑1 (MQ=60)

                      GCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCT                                                                         >  SRR4302543.6340069/1‑94 (MQ=60)

                      GCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCT                                                                         >  SRR4302543.2202574/1‑94 (MQ=60)

                        ACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTC                                                                       <  SRR4302543.6770074/94‑1 (MQ=60)

                         CTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCA                                                                      <  SRR4302543.6244730/94‑1 (MQ=60)

                         CTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCA                                                                      >  SRR4302543.6213774/1‑94 (MQ=60)

                         CTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCA                                                                      >  SRR4302543.525364/1‑94 (MQ=60)

                         CTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCA                                                                      >  SRR4302543.5187288/1‑94 (MQ=60)

                          TGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCAC                                                                     <  SRR4302543.6283958/94‑1 (MQ=60)

                          TGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCAC                                                                     <  SRR4302543.2360014/94‑1 (MQ=60)

                          TGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCAC                                                                     >  SRR4302543.476401/1‑94 (MQ=60)

                           GACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACC                                                                    >  SRR4302543.935535/1‑94 (MQ=60)

                           GACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACC                                                                    >  SRR4302543.1307284/1‑94 (MQ=60)

                           GACTGGTGCGTTGGTGATTGTCGCCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACC                                                                    <  SRR4302543.2055588/94‑1 (MQ=60)

                            ACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCT                                                                   >  SRR4302543.6986644/1‑94 (MQ=60)

                            ACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCT                                                                   <  SRR4302543.1774937/94‑1 (MQ=60)

                            ACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCT                                                                   >  SRR4302543.6745486/1‑94 (MQ=60)

                            ACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCT                                                                   >  SRR4302543.5488987/1‑94 (MQ=60)

                             CTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTT                                                                  >  SRR4302543.6763527/1‑94 (MQ=60)

                              TGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTC                                                                 <  SRR4302543.1185832/94‑1 (MQ=60)

                              TGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTC                                                                 >  SRR4302543.3571519/1‑94 (MQ=60)

                              TGGTGCGTTGGTTATTGTCACCGGGATGGGGATGGGAAATATCGCCCGTTATTTCAATCTGCCCGTTTCCACTATGAGTGTTACCTTCGCCTTC                                                                 >  SRR4302543.1574470/1‑94 (MQ=60)

                               GGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCC                                                                <  SRR4302543.146732/94‑1 (MQ=60)

                               GGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCC                                                                >  SRR4302543.7282646/1‑94 (MQ=60)

                                GTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCT                                                               <  SRR4302543.7292588/94‑1 (MQ=60)

                                GTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCT                                                               <  SRR4302543.3346759/94‑1 (MQ=60)

                                 TGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTC                                                              <  SRR4302543.7385157/94‑1 (MQ=60)

                                 TGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTC                                                              >  SRR4302543.5959516/1‑94 (MQ=60)

                                 TGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTC                                                              >  SRR4302543.6134975/1‑94 (MQ=60)

                                  GCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCA                                                             <  SRR4302543.6211269/94‑1 (MQ=60)

                                   CGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAA                                                            >  SRR4302543.486574/1‑94 (MQ=60)

                                    GTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAC                                                           >  SRR4302543.6896905/1‑94 (MQ=60)

                                    GTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAC                                                           <  SRR4302543.704368/94‑1 (MQ=60)

                                    GTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAC                                                           <  SRR4302543.4395502/94‑1 (MQ=60)

                                    GTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAC                                                           <  SRR4302543.3028875/94‑1 (MQ=60)

                                    GTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAC                                                           <  SRR4302543.7913289/94‑1 (MQ=60)

                                    GTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAC                                                           <  SRR4302543.310987/94‑1 (MQ=60)

                                    GTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAC                                                           >  SRR4302543.2608259/1‑94 (MQ=60)

                                     TTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACG                                                          <  SRR4302543.18692/94‑1 (MQ=60)

                                     TTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACG                                                          <  SRR4302543.7952419/94‑1 (MQ=60)

                                     TTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACG                                                          <  SRR4302543.4655680/94‑1 (MQ=60)

                                     TTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACG                                                          >  SRR4302543.3298897/1‑94 (MQ=60)

                                      TGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGC                                                         <  SRR4302543.1937607/94‑1 (MQ=60)

                                       TGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCC                                                        <  SRR4302543.5666944/94‑1 (MQ=60)

                                       GGTTATTGTCGCCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCC                                                        <  SRR4302543.3435476/94‑1 (MQ=60)

                                       GGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCC                                                        <  SRR4302543.2387739/94‑1 (MQ=60)

                                        GTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCG                                                       <  SRR4302543.7775701/94‑1 (MQ=60)

                                         GTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGG                                                      <  SRR4302543.5931903/94‑1 (MQ=60)

                                          TATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGC                                                     >  SRR4302543.6379450/1‑94 (MQ=60)

                                          TATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGC                                                     >  SRR4302543.3304791/1‑94 (MQ=60)

                                          TATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGC                                                     >  SRR4302543.4275025/1‑94 (MQ=60)

                                           ATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCA                                                    >  SRR4302543.2853860/1‑94 (MQ=60)

                                            TTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCAT                                                   <  SRR4302543.3345798/94‑1 (MQ=60)

                                            TTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCAT                                                   <  SRR4302543.4023506/94‑1 (MQ=60)

                                            TTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCAT                                                   <  SRR4302543.3066071/94‑1 (MQ=60)

                                            TTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCAT                                                   <  SRR4302543.1889057/94‑1 (MQ=60)

                                            TTGTCACCGGGATGGGGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGGAT                                                   >  SRR4302543.1725722/1‑94 (MQ=60)

                                             TGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATT                                                  >  SRR4302543.5123086/1‑94 (MQ=60)

                                             TGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATT                                                  <  SRR4302543.4219846/94‑1 (MQ=60)

                                                 ACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAA                                              >  SRR4302543.3951431/1‑94 (MQ=60)

                                                 ACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAA                                              >  SRR4302543.674230/1‑94 (MQ=60)

                                                 ACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAA                                              >  SRR4302543.6720970/1‑94 (MQ=60)

                                                 ACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAA                                              >  SRR4302543.7026940/1‑94 (MQ=60)

                                                   CGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATC                                            <  SRR4302543.469236/94‑1 (MQ=60)

                                                   CGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATC                                            >  SRR4302543.3465401/1‑94 (MQ=60)

                                                    GGGATGGTGATGGGAAATATCGCCTATTATTTCAATCTGCCCGTTTCCAGGATGATGAATACGTGCACATTCCTCACCGCCGCCATTTTAATCC                                           >  SRR4302543.6540084/1‑94 (MQ=40)

                                                      GATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCT                                         >  SRR4302543.595439/1‑94 (MQ=60)

                                                      GATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCT                                         <  SRR4302543.7253265/94‑1 (MQ=60)

                                                      GATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCT                                         <  SRR4302543.7826199/94‑1 (MQ=60)

                                                      GATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCT                                         >  SRR4302543.6655003/1‑94 (MQ=60)

                                                       ATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTA                                        >  SRR4302543.284907/1‑94 (MQ=60)

                                                        TGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTAT                                       >  SRR4302543.3480751/1‑94 (MQ=60)

                                                          GTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCT                                     <  SRR4302543.6383184/94‑1 (MQ=60)

                                                          GTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCT                                     <  SRR4302543.1128815/94‑1 (MQ=60)

                                                          GTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCT                                     <  SRR4302543.1128816/94‑1 (MQ=60)

                                                           TGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTT                                    <  SRR4302543.506642/94‑1 (MQ=60)

                                                             ATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCC                                  >  SRR4302543.3038/1‑94 (MQ=60)

                                                             ATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCC                                  <  SRR4302543.1421596/94‑1 (MQ=60)

                                                             ATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCC                                  <  SRR4302543.5273078/94‑1 (MQ=60)

                                                                GGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCA                               >  SRR4302543.3000623/1‑94 (MQ=60)

                                                                GGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCA                               >  SRR4302543.2656153/1‑94 (MQ=60)

                                                                GGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCA                               >  SRR4302543.2656152/1‑94 (MQ=60)

                                                                  AAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCGCCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAAC                             <  SRR4302543.433938/94‑1 (MQ=60)

                                                                  AAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAAC                             >  SRR4302543.6953208/1‑94 (MQ=60)

                                                                  AAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAAC                             <  SRR4302543.5251090/94‑1 (MQ=60)

                                                                   AATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACG                            >  SRR4302543.3610198/1‑94 (MQ=60)

                                                                   AATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACG                            <  SRR4302543.7850162/94‑1 (MQ=60)

                                                                   AATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACG                            >  SRR4302543.3610199/1‑94 (MQ=60)

                                                                   AATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACG                            >  SRR4302543.7392877/1‑94 (MQ=60)

                                                                   AATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACG                            <  SRR4302543.1116093/94‑1 (MQ=60)

                                                                    ATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGC                           >  SRR4302543.2457665/1‑94 (MQ=60)

                                                                    ATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGC                           >  SRR4302543.3092345/1‑94 (MQ=60)

                                                                    ATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGC                           >  SRR4302543.2970661/1‑94 (MQ=60)

                                                                    ATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGC                           >  SRR4302543.4129350/1‑94 (MQ=60)

                                                                     TATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCC                          <  SRR4302543.3798895/94‑1 (MQ=60)

                                                                     TATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCC                          <  SRR4302543.5015111/94‑1 (MQ=60)

                                                                      ATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCT                         <  SRR4302543.3606523/94‑1 (MQ=60)

                                                                       TCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATTCCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTG                        <  SRR4302543.4600455/94‑1 (MQ=60)

                                                                       TCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTCTCTTCCTCAACGCCTG                        >  SRR4302543.4649929/1‑94 (MQ=60)

                                                                       TCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTG                        <  SRR4302543.288376/94‑1 (MQ=60)

                                                                       TCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTG                        <  SRR4302543.1857682/94‑1 (MQ=60)

                                                                       TCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTG                        >  SRR4302543.1262005/1‑94 (MQ=60)

                                                                       TCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTG                        >  SRR4302543.1253691/1‑94 (MQ=60)

                                                                       TCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATATTAATCTCTATCTTCCTCAACGCCTG                        >  SRR4302543.267458/1‑94 (MQ=60)

                                                                       TCGCCGATTATTTCAATCTGCCCGTTTCCAGTATCACTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTCTCTTCCTCAccctctc                        >  SRR4302543.4649930/1‑87 (MQ=60)

                                                                        CGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGG                       >  SRR4302543.4277276/1‑94 (MQ=60)

                                                                        CGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGG                       <  SRR4302543.5765259/94‑1 (MQ=60)

                                                                        CGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGG                       >  SRR4302543.6635374/1‑94 (MQ=60)

                                                                         GCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGC                      >  SRR4302543.6670716/1‑94 (MQ=60)

                                                                         GCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGC                      <  SRR4302543.7547779/94‑1 (MQ=60)

                                                                          CCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCT                     <  SRR4302543.1927191/94‑1 (MQ=60)

                                                                          CCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCT                     <  SRR4302543.257713/94‑1 (MQ=60)

                                                                          CCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCT                     <  SRR4302543.4936813/94‑1 (MQ=60)

                                                                           CGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTG                    >  SRR4302543.1077227/1‑94 (MQ=60)

                                                                           CGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTG                    >  SRR4302543.1292214/1‑94 (MQ=60)

                                                                            GATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGA                   >  SRR4302543.3969393/1‑94 (MQ=60)

                                                                            GATTATTTCAATCTGCCCGTCTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGA                   >  SRR4302543.7096997/1‑94 (MQ=60)

                                                                             ATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGAT                  <  SRR4302543.750020/94‑1 (MQ=60)

                                                                             ATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGAT                  <  SRR4302543.4777898/94‑1 (MQ=60)

                                                                             ATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGAT                  <  SRR4302543.4777636/94‑1 (MQ=60)

                                                                              TTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATG                 <  SRR4302543.3323216/94‑1 (MQ=60)

                                                                              TTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATG                 <  SRR4302543.4091174/94‑1 (MQ=60)

                                                                               TATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGG                >  SRR4302543.5570068/1‑94 (MQ=60)

                                                                                ATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGA               <  SRR4302543.3694434/94‑1 (MQ=60)

                                                                                 TTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAA              <  SRR4302543.5264670/94‑1 (MQ=60)

                                                                                 TTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAA              >  SRR4302543.2078700/1‑94 (MQ=60)

                                                                                   TCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAAT            <  SRR4302543.4651832/94‑1 (MQ=60)

                                                                                   TCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAAT            <  SRR4302543.1827962/94‑1 (MQ=60)

                                                                                    TAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATC           <  SRR4302543.1184330/94‑1 (MQ=60)

                                                                                    CAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATC           <  SRR4302543.4663306/94‑1 (MQ=60)

                                                                                    CAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATC           >  SRR4302543.5893887/1‑94 (MQ=60)

                                                                                    CAATCGGCCCGTTGCCAGTATGAGTAATACCTTCCCCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATC           <  SRR4302543.4663307/94‑1 (MQ=60)

                                                                                     AATCTGCCCGTTTCCAGTATGAGTAATGCCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCG          <  SRR4302543.2217920/94‑1 (MQ=60)

                                                                                     AATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCG          <  SRR4302543.1493990/94‑1 (MQ=60)

                                                                                     AATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCG          >  SRR4302543.7260149/1‑94 (MQ=60)

                                                                                      ATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGT         >  SRR4302543.3365074/1‑94 (MQ=60)

                                                                                      ATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGT         >  SRR4302543.3687209/1‑94 (MQ=60)

                                                                                      ATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGC         >  SRR4302543.5894749/1‑94 (MQ=60)

                                                                                      ATCTGCCCGTTGCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGT         <  SRR4302543.7033004/94‑1 (MQ=60)

                                                                                        CTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCC       >  SRR4302543.6160701/1‑94 (MQ=60)

                                                                                         TGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGACATCGTCCC      >  SRR4302543.712147/1‑94 (MQ=60)

                                                                                         TGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCC      >  SRR4302543.2536809/1‑94 (MQ=60)

                                                                                         TGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCC      <  SRR4302543.7301651/94‑1 (MQ=60)

                                                                                         TGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCC      <  SRR4302543.6034219/94‑1 (MQ=60)

                                                                                         TGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCC      >  SRR4302543.275065/1‑94 (MQ=60)

                                                                                         TGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCC      >  SRR4302543.436985/1‑94 (MQ=60)

                                                                                           CCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGT    >  SRR4302543.5113840/1‑94 (MQ=60)

                                                                                           CCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGT    >  SRR4302543.4995548/1‑94 (MQ=60)

                                                                                             CGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTG  <  SRR4302543.3768966/94‑1 (MQ=60)

                                                                                             CGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTG  <  SRR4302543.4147706/94‑1 (MQ=60)

                                                                                             CGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTG  <  SRR4302543.3089061/94‑1 (MQ=60)

                                                                                             CGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTG  <  SRR4302543.624784/94‑1 (MQ=60)

ATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTG  >  NC_000913/3490234‑3490420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`