Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,566,875 A→G R29R (CGT→CGC)  glgC ← glucose‑1‑phosphate adenylyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,566,8750AG100.0% 762.1 / NA 246R29R (CGT→CGC) glgCglucose‑1‑phosphate adenylyltransferase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (162/84);  total (162/84)

Only 100 of 338 total aligned reads displayed.

AGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCACGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGAC  >  NC_000913/3566785‑3566964
                                                                                          |                                                                                         
 gACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGt                                                                                        <  2:5207269/93‑1 (MQ=255)
  aCAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGtc                                                                                       <  1:4946850/93‑1 (MQ=255)
  aCAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGtc                                                                                       >  2:3901384/1‑93 (MQ=255)
   cAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGtcc                                                                                      <  1:5210927/93‑1 (MQ=255)
   cAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGtcc                                                                                      <  2:2345897/93‑1 (MQ=255)
    aGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGtcct                                                                                     <  1:3853034/93‑1 (MQ=255)
     gcgcAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGtcctc                                                                                    >  2:602568/1‑93 (MQ=255)
     gcgcAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGtcctc                                                                                    >  2:2562040/1‑93 (MQ=255)
      cgcAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGtcctcc                                                                                   >  2:7478004/1‑93 (MQ=255)
       gcAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTccc                                                                                  >  1:1358101/1‑93 (MQ=255)
        cAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCg                                                                                 <  1:6464686/93‑1 (MQ=255)
          aaGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGcc                                                                               >  1:6806337/1‑93 (MQ=255)
           aGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCa                                                                              <  2:1940105/93‑1 (MQ=255)
           aGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCa                                                                              <  1:7703893/93‑1 (MQ=255)
           aGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCa                                                                              <  2:1428607/93‑1 (MQ=255)
            gTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTCACGCGGCCTCCCGCCac                                                                             >  1:233037/1‑92 (MQ=255)
             tCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGt                                                                            >  1:613228/1‑93 (MQ=255)
              cGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTa                                                                           <  1:1130665/93‑1 (MQ=255)
                aTAATGCGGAACTTCCCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATc                                                                         <  2:5355534/93‑1 (MQ=255)
                 tAATGCGGAACTTCCCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCa                                                                        <  2:5141873/93‑1 (MQ=255)
                  aaTGCGGAACTTCCCGCGGAAGTGTACGGCCGTTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAg                                                                       <  1:2586576/93‑1 (MQ=255)
                   aTGCGGACCTTCCCGCCGAGGTGTACGGCCGTTTTTGCTCGTTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAgg                                                                      <  1:4371395/93‑1 (MQ=255)
                    tGCGTAACTTCCCGCCGAGTTGTACGGCCGGTTTGCCTCGTTTATTGGTTAAATCCTTCGGGCGGGTCCCGCGTCCTCCCGCCAGTATCAggg                                                                     <  2:6235615/93‑1 (MQ=255)
                       ggAACTTACCGCCGAGGTGTCCGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCaa                                                                  <  2:2603983/93‑1 (MQ=255)
                        gAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGTTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAAc                                                                 <  2:5716984/93‑1 (MQ=255)
                        gAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAAc                                                                 >  2:3197360/1‑93 (MQ=255)
                         aaCTTCCCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACa                                                                <  1:7901430/93‑1 (MQ=255)
                          aCTTCCCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAg                                                               <  1:1660388/93‑1 (MQ=255)
                          aCTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAg                                                               >  2:6634084/1‑93 (MQ=255)
                          aCTTACCGCCGAAGTGTACGCCCGGTTTTGCTCGCTTATTGGTTAATTCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAg                                                               <  2:1126688/93‑1 (MQ=255)
                            ttACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGAt                                                             >  2:673160/1‑93 (MQ=255)
                             tACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGAtt                                                            >  1:6285974/1‑93 (MQ=255)
                                 gccgCAGTGTACGGCCGGGTTTGCTCGCTTATTGGTTAAATACTTCAGGCGGGTACCGCGTCCGCCCGCCAGTATCAGGGCAACAGAGTTGaa                                                        >  2:7105023/1‑93 (MQ=255)
                                 gccgAAGTGTAGGGCCGTTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCaa                                                        <  1:2861600/93‑1 (MQ=255)
                                 gccgAAGTGTACGGCCGTTTTTGCTCGCTTATTGGTTAAATCCTGCGGGGGGGTCCCGCGCCCTCCCGCCAGTATCAGGGCAACAGATTTCaa                                                        <  2:1503228/93‑1 (MQ=255)
                                 gccgAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTAAAATCCTTCAGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCaa                                                        <  2:312434/93‑1 (MQ=255)
                                  ccgAAGTGTACGGCCGGTTTTGCTCGCTTATTTGTTAAATCCTTCAGGCGGGAACCGCGTCCTCCCGCCAGTATCAGGGCAAAAGGTTTCAAt                                                       >  2:5871732/1‑93 (MQ=255)
                                  ccgAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAAt                                                       <  2:166485/93‑1 (MQ=255)
                                  ccgAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAAt                                                       <  1:5020613/93‑1 (MQ=255)
                                  ccgAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGAGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAAt                                                       >  1:4893728/1‑93 (MQ=255)
                                   cgAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATg                                                      <  1:3623205/93‑1 (MQ=255)
                                    gAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATgg                                                     >  2:2083222/1‑93 (MQ=255)
                                     aaGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGc                                                    <  1:6731396/93‑1 (MQ=255)
                                     aaGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGc                                                    >  1:869823/1‑93 (MQ=255)
                                       gtgtACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAg                                                  >  2:4204910/1‑93 (MQ=255)
                                         gtACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCt                                                >  2:7373397/1‑93 (MQ=255)
                                           gcGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTgg                                              <  1:4631431/92‑1 (MQ=255)
                                           aCGGCGGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTgg                                              <  1:6552619/93‑1 (MQ=255)
                                             ggCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGgcg                                            >  2:6053905/1‑93 (MQ=255)
                                              gCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGgcgc                                           >  1:5800201/1‑93 (MQ=255)
                                                cGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGgcgcgc                                         >  2:5569153/1‑93 (MQ=255)
                                                 ggTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGcc                                        >  2:7258865/1‑93 (MQ=255)
                                                 ggTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGGACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAAAGGCAGGTGgcgcggc                                        >  2:2287554/1‑91 (MQ=255)
                                                  gTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCa                                       >  2:4925331/1‑93 (MQ=255)
                                                   ttttGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCaa                                      >  2:239353/1‑93 (MQ=255)
                                                   ttttGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCaa                                      >  2:1801835/1‑93 (MQ=255)
                                                    tttGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAAc                                     >  1:7064028/1‑93 (MQ=255)
                                                     ttGCTCGCTTATTGGTTAAATCCTTCAGGCGGGGACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACa                                    <  1:7651652/93‑1 (MQ=255)
                                                       gCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCCACAGATTTCAATGGCAGCTGGCGCGCCAACAtt                                  >  1:3916259/1‑93 (MQ=255)
                                                         tctcTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTaa                                <  1:1988070/90‑1 (MQ=255)
                                                         ccGCTTATTGTTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTaa                                <  1:5299940/92‑1 (MQ=255)
                                                           ccTTATTGGTTAAATCCTCCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGt                              <  2:7775288/92‑1 (MQ=255)
                                                             ttATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGa                            >  1:4214873/1‑93 (MQ=255)
                                                             ttATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGa                            >  2:3623097/1‑93 (MQ=255)
                                                             ttATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGa                            <  2:3827069/93‑1 (MQ=255)
                                                              tATTGTTTAACTCCTTCAGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGAt                           <  2:6798556/93‑1 (MQ=255)
                                                              tATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGAt                           >  2:5647593/1‑93 (MQ=255)
                                                              tATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGAt                           >  2:3817417/1‑93 (MQ=255)
                                                               tttGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATc                          <  1:2460205/92‑1 (MQ=255)
                                                               aTTGGTTAAACCCTTCAGGCGGGCACCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATc                          <  1:1476266/93‑1 (MQ=255)
                                                                 tGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGt                        <  2:2464983/93‑1 (MQ=255)
                                                                  ggTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGtt                       <  2:4091027/93‑1 (MQ=255)
                                                                   gTTAATTCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGttc                      <  1:837316/93‑1 (MQ=255)
                                                                   gTTAAATCCTTCGGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGttc                      <  1:4771456/93‑1 (MQ=255)
                                                                   gTTAAATCCTTCAGGCGGGTCCCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGttc                      <  1:2235810/93‑1 (MQ=255)
                                                                    ttAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGttct                     >  1:6667870/1‑93 (MQ=255)
                                                                      aaaTCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGttcttc                   >  2:7666594/1‑93 (MQ=255)
                                                                      aaaTCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGttcttc                   <  1:4116705/93‑1 (MQ=255)
                                                                        aTCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTtctc                 <  1:7438894/93‑1 (MQ=255)
                                                                        aTCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGCGATCGTTCTtctc                 >  1:4291155/1‑93 (MQ=255)
                                                                         tCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTctct                >  1:2081639/1‑93 (MQ=255)
                                                                           cTTCGGGCGGGTCCGCCGCCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTaa              <  1:1431857/93‑1 (MQ=255)
                                                                           cTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTaa              >  2:5819989/1‑93 (MQ=255)
                                                                           cTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTaa              >  1:6878521/1‑93 (MQ=255)
                                                                            ttCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTaaa             >  1:3458450/1‑93 (MQ=255)
                                                                             tcgggCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAAc            <  2:458580/90‑1 (MQ=255)
                                                                               aGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTa          >  2:479319/1‑93 (MQ=255)
                                                                               aGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTa          >  1:5631443/1‑93 (MQ=255)
                                                                                ggCGGGTCCCGCGCCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTaa         <  1:5906687/93‑1 (MQ=255)
                                                                                ggCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTaa         >  1:3045455/1‑93 (MQ=255)
                                                                                ggCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTaa         >  1:3342590/1‑93 (MQ=255)
                                                                                 gggggTCCCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAAc        <  2:2853983/91‑1 (MQ=255)
                                                                                 gCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAAc        <  1:5406093/93‑1 (MQ=255)
                                                                                  ggggTACCGCGCCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAAcc       <  2:7915264/92‑1 (MQ=255)
                                                                                   gggTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCa      >  1:5149464/1‑93 (MQ=255)
                                                                                   gggTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCa      >  2:4185416/1‑93 (MQ=255)
                                                                                    gttACCGCGCCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCAt     <  1:4673523/91‑1 (MQ=255)
                                                                                    ggTCCCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCAt     <  1:7246269/93‑1 (MQ=255)
                                                                                    ggTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCAt     <  1:2686348/93‑1 (MQ=255)
                                                                                       aCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGAc  >  1:4468840/1‑93 (MQ=255)
                                                                                          |                                                                                         
AGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCACGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGAC  >  NC_000913/3566785‑3566964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GTTAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCACGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGACTA  >  NC_000913/3566782‑3566966
                                                                                               |                                                                                           
GTTAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCG                                                                                             <  SRR4302543.689620/94‑1 (MQ=60)
GTTAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCG                                                                                             >  SRR4302543.7097062/1‑94 (MQ=60)
GTTAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCG                                                                                             >  SRR4302543.2880023/1‑94 (MQ=60)
GTTAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCG                                                                                             <  SRR4302543.354945/94‑1 (MQ=60)
 TTAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGTCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGC                                                                                            >  SRR4302543.7114575/1‑94 (MQ=60)
  TAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCG                                                                                           <  SRR4302543.1611302/94‑1 (MQ=60)
   CGACAGCCCAAAGCCGATAATGCGGAACTTCCCGCCGAAGTTTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGT                                                                                          <  SRR4302543.2284843/94‑1 (MQ=60)
   AGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGT                                                                                          <  SRR4302543.6862418/94‑1 (MQ=60)
   AGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGT                                                                                          >  SRR4302543.5239449/1‑94 (MQ=60)
    GACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTC                                                                                         <  SRR4302543.6744686/94‑1 (MQ=60)
    GACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTC                                                                                         <  SRR4302543.3632902/94‑1 (MQ=60)
     ACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCC                                                                                        <  SRR4302543.4991901/94‑1 (MQ=60)
     ACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCC                                                                                        >  SRR4302543.1203379/1‑94 (MQ=60)
     ACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCC                                                                                        <  SRR4302543.5813758/94‑1 (MQ=60)
      CAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCT                                                                                       <  SRR4302543.5257879/94‑1 (MQ=60)
      CAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCT                                                                                       <  SRR4302543.2818280/94‑1 (MQ=60)
       AGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTC                                                                                      <  SRR4302543.6859112/94‑1 (MQ=60)
       AGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTC                                                                                      >  SRR4302543.2466679/1‑94 (MQ=60)
       AGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTC                                                                                      <  SRR4302543.3887084/94‑1 (MQ=60)
         CGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAGT‑CCTTCAGGCGGGTACCGCGTCCTCCC                                                                                    <  SRR4302543.6645326/94‑1 (MQ=60)
         CGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCC                                                                                    <  SRR4302543.866763/94‑1 (MQ=60)
         CGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCC                                                                                    >  SRR4302543.1370258/1‑94 (MQ=60)
         CGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCC                                                                                    <  SRR4302543.5679593/94‑1 (MQ=60)
           CAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGC                                                                                  >  SRR4302543.1197554/1‑94 (MQ=60)
           CAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGC                                                                                  <  SRR4302543.6525592/94‑1 (MQ=60)
            AAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCC                                                                                 >  SRR4302543.6870603/1‑94 (MQ=60)
            AAAGTCGATAATGCGGAACTTACCGCCGAAGCGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCC                                                                                 >  SRR4302543.2242931/1‑94 (MQ=60)
              AGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAG                                                                               <  SRR4302543.3114505/94‑1 (MQ=60)
              AGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAG                                                                               <  SRR4302543.7776788/94‑1 (MQ=60)
              AGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAG                                                                               >  SRR4302543.235049/1‑94 (MQ=60)
               GTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGT                                                                              >  SRR4302543.223885/1‑94 (MQ=60)
               GTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGT                                                                              <  SRR4302543.3958921/94‑1 (MQ=60)
               GTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGT                                                                              >  SRR4302543.7726785/1‑94 (MQ=60)
               GTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGT                                                                              >  SRR4302543.618833/1‑94 (MQ=60)
                 CGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTAT                                                                            <  SRR4302543.1140927/94‑1 (MQ=60)
                 CGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTAT                                                                            >  SRR4302543.7353585/1‑94 (MQ=60)
                  GATAATGCGGAACTTCCCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATC                                                                           <  SRR4302543.5019963/94‑1 (MQ=60)
                  GATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATC                                                                           <  SRR4302543.6934418/94‑1 (MQ=60)
                  GATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATC                                                                           <  SRR4302543.5131865/94‑1 (MQ=60)
                   ATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCA                                                                          >  SRR4302543.7638325/1‑94 (MQ=60)
                    TAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAG                                                                         >  SRR4302543.1549515/1‑94 (MQ=60)
                    TAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAG                                                                         >  SRR4302543.2847660/1‑94 (MQ=60)
                    TAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAG                                                                         >  SRR4302543.2047874/1‑94 (MQ=60)
                     AATGCGGAACTTCCCGCGGAAGTGTACGGCCGTTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGG                                                                        <  SRR4302543.2610103/94‑1 (MQ=60)
                     AATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGG                                                                        <  SRR4302543.7871868/94‑1 (MQ=60)
                      ATGCGGACCTTCCCGCCGAGGTGTACGGCCGTTT‑TTGCTCGTTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGG                                                                       <  SRR4302543.4410984/94‑1 (MQ=60)
                      ATGCGGAACTTACCGCCGAAGTGTACGGCGGGTT‑TTGCTCGTTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGG                                                                       <  SRR4302543.7201104/94‑1 (MQ=60)
                       TGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGC                                                                      <  SRR4302543.7991946/94‑1 (MQ=60)
                        GCGGAACTTCCCGCCGAGGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCA                                                                     <  SRR4302543.5281079/94‑1 (MQ=60)
                         CGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAA                                                                    >  SRR4302543.7854468/1‑94 (MQ=60)
                         CGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGCACCGCGTCCTCCCGCCAGTATCAGGGCAA                                                                    >  SRR4302543.1374268/1‑94 (MQ=60)
                          GGAACTTACCGCCGAAGTGTGCGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAAC                                                                   >  SRR4302543.7763796/1‑94 (MQ=60)
                           GAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACA                                                                  <  SRR4302543.1447469/94‑1 (MQ=60)
                            AACTTCCCGCGGAGGTGTACGGCCGGTT‑TTGCTCGTTTATTGGTTAAAT‑CCTTCGGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAG                                                                 <  SRR4302543.3741147/94‑1 (MQ=60)
                            AACTTCCCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAG                                                                 <  SRR4302543.7975702/94‑1 (MQ=60)
                             ACTTCCCGCCGAAGTGTACGGCCGTTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGA                                                                <  SRR4302543.6019759/94‑1 (MQ=60)
                             ACTTCCCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGA                                                                <  SRR4302543.1675262/94‑1 (MQ=60)
                             ACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGA                                                                >  SRR4302543.6918600/1‑94 (MQ=60)
                              CTTCCCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTCCCGCGTCCCCCCGCCAGTATCAGGGCAACAGAT                                                               <  SRR4302543.7192512/94‑1 (MQ=60)
                              CTTACCGCCGAAGTGTACGGCGGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGTTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGAT                                                               <  SRR4302543.6408160/94‑1 (MQ=60)
                              CTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGAT                                                               >  SRR4302543.5842926/1‑94 (MQ=60)
                              CTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGAT                                                               >  SRR4302543.1987059/1‑94 (MQ=60)
                              CTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGAT                                                               >  SRR4302543.3017293/1‑94 (MQ=60)
                               TTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATT                                                              >  SRR4302543.6345187/1‑94 (MQ=60)
                               TTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATT                                                              >  SRR4302543.53904/1‑94 (MQ=60)
                                 tgccgccgagttgtatggtctttttagcgtgtTTATTGTTTAAAT‑CCTTCAGGCGGGAACCGGGTCCCCCCGCCAGTATCAGGGCAACAGATTT                                                             <  SRR4302543.6673782/62‑1 (MQ=41)
                                 GCCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCTTCCTCCCGCCAGTATCAGGGCAACAGATTTC                                                            <  SRR4302543.2762870/94‑1 (MQ=60)
                                 CCCGCCGAAGTGTCCGGCCGGTT‑TTGCGCGCTTATTGGTTAAAT‑CCTGCGGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTC                                                            <  SRR4302543.5608168/94‑1 (MQ=60)
                                  ccgaggaggtgtgcgttCGGTT‑TTGCTCGCTTATTGGTAAAAG‑CCTTCAGGCGGGTACCTCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCA                                                           <  SRR4302543.6184092/77‑1 (MQ=60)
                                  CCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCA                                                           >  SRR4302543.4632339/1‑94 (MQ=60)
                                   CGCCGAGGTGGACGGCGGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAA                                                          <  SRR4302543.3473291/94‑1 (MQ=60)
                                    GCCGAGGTGTACGGCCGGTT‑TTGCTCGTTTATTTGTTAAAT‑CCTTCAGGCGGGTACCCCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAAT                                                         <  SRR4302543.5674414/94‑1 (MQ=60)
                                    GCCGAAGTGTAGGGCCGTTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAAT                                                         <  SRR4302543.2887700/94‑1 (MQ=60)
                                    GCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAAT                                                         <  SRR4302543.2585451/94‑1 (MQ=60)
                                    GCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAAT                                                         <  SRR4302543.4973109/94‑1 (MQ=60)
                                    GCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGAGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAAT                                                         >  SRR4302543.4938338/1‑94 (MQ=60)
                                    GACGAAGTGTACGGCCGGTT‑TTGCTCGATTATTGGTAAAAT‑CCTTCGGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAAT                                                         <  SRR4302543.5391372/94‑1 (MQ=60)
                                     cccaaagtgttctcccggttttcccctctttgTGGTTAACT‑CCTTCAGGCGGGCACCGCGCCCCCCCTCCAGTATCAGGGCAACAGATTTCAAT                                                         <  SRR4302543.5674413/62‑1 (MQ=28)
                                     CCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATG                                                        <  SRR4302543.5066305/94‑1 (MQ=60)
                                      cgaggtggacgccggtTT‑TTGCTCGTTTATT‑GTTAAATCCCTCCAGGCGGGTCCCGCGCCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGG                                                       <  SRR4302543.2208735/78‑1 (MQ=24)
                                      CGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGG                                                       <  SRR4302543.3655132/94‑1 (MQ=60)
                                       GAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGC                                                      >  SRR4302543.877584/1‑94 (MQ=60)
                                        AAGTGTACGGCTGTTT‑TTGCTCGTTTATTGGTTAAAT‑CCTTCGGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCA                                                     <  SRR4302543.7154306/94‑1 (MQ=60)
                                        AAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCA                                                     <  SRR4302543.6794986/94‑1 (MQ=60)
                                        AAGTGTA‑GGCCTGTTGTTGCTCTCTTATTGTTTAAAT‑CTTTCAGGCGGGTACCGCTCCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCA                                                     <  SRR4302543.1924013/94‑1 (MQ=50)
                                         AGTGTACGGCCGTTT‑TTGCTCGCTTATTGGTAAAAT‑CTTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAG                                                    <  SRR4302543.3547381/94‑1 (MQ=60)
                                         AGTGTACGGCCGGTT‑TTGCTCTCTTATTGGTTAAAT‑CCTTCGGGCGGGTGCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAG                                                    <  SRR4302543.2608083/94‑1 (MQ=60)
                                           TGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCT                                                  >  SRR4302543.3891689/1‑94 (MQ=60)
                                            GTACGGCCGTTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTG                                                 <  SRR4302543.6811137/94‑1 (MQ=60)
                                            GTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTG                                                 >  SRR4302543.4377999/1‑94 (MQ=60)
                                              GCGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGC                                               <  SRR4302543.4673526/94‑1 (MQ=60)
                                              AGGGCCGTTT‑TTGCTCGTTTATTGGTAAAAC‑CCTTCAGGCGGGTACCGCGCCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGC                                               <  SRR4302543.6991428/94‑1 (MQ=60)
                                              ACGGCGGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGC                                               <  SRR4302543.6614292/94‑1 (MQ=60)
                                               CGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCG                                              >  SRR4302543.2258908/1‑94 (MQ=60)
                                                GGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGC                                             >  SRR4302543.2009329/1‑94 (MQ=60)
                                                GGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGC                                             >  SRR4302543.5852964/1‑94 (MQ=60)
                                                 GCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCG                                            >  SRR4302543.1662288/1‑94 (MQ=60)
                                                    GGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCA                                         >  SRR4302543.4748011/1‑94 (MQ=60)
                                                    GGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCA                                         >  SRR4302543.5327161/1‑94 (MQ=60)
                                                    GGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCA                                         >  SRR4302543.4748012/1‑94 (MQ=60)
                                                      TT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAAC                                       >  SRR4302543.7132610/1‑94 (MQ=60)
                                                       T‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACA                                      >  SRR4302543.169862/1‑94 (MQ=60)
                                                         TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACAT                                     >  SRR4302543.598559/1‑94 (MQ=60)
                                                         TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGGACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACAT                                     <  SRR4302543.7724203/94‑1 (MQ=60)
                                                          TGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCCACAGATTTCAATGGCAGCTGGCGCGCCAACATT                                    >  SRR4302543.3950825/1‑94 (MQ=60)
                                                           TCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTA                                   <  SRR4302543.504475/94‑1 (MQ=60)
                                                           GCTCGTTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTA                                   <  SRR4302543.7129246/94‑1 (MQ=60)
                                                            ctggttttTTGGTTAATT‑CCTTCAGGCGGGTACCGCCTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAA                                  <  SRR4302543.5071410/86‑1 (MQ=60)
                                                            CTCGCTTATTGGTTAAAT‑GCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGGGGGGCAACATTAA                                  >  SRR4302543.3896293/1‑94 (MQ=60)
                                                            CTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAA                                  >  SRR4302543.4450793/1‑94 (MQ=60)
                                                            CTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGAATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAA                                  >  SRR4302543.966046/1‑94 (MQ=60)
                                                             TCTCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAG                                 <  SRR4302543.2005889/94‑1 (MQ=60)
                                                             TCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAG                                 <  SRR4302543.5330588/94‑1 (MQ=60)
                                                             CCGCTTATTGTTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAG                                 <  SRR4302543.5347786/94‑1 (MQ=60)
                                                              CGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCTCGCCAACATTAAGT                                >  SRR4302543.3789911/1‑94 (MQ=60)
                                                              CGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGT                                >  SRR4302543.2708706/1‑94 (MQ=60)
                                                              CGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGT                                >  SRR4302543.6605076/1‑94 (MQ=60)
                                                              CGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGT                                <  SRR4302543.3990129/94‑1 (MQ=60)
                                                              CGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGT                                >  SRR4302543.4400901/1‑94 (MQ=60)
                                                               GCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGGTGGCGCGCCAACATTAAGTG                               >  SRR4302543.1393142/1‑94 (MQ=60)
                                                               GCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTG                               >  SRR4302543.4684918/1‑94 (MQ=60)
                                                                CTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTTGCGCGCCAACATTAAGTGT                              >  SRR4302543.4736915/1‑94 (MQ=60)
                                                                CTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGA                              >  SRR4302543.770836/1‑94 (MQ=60)
                                                                CTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGA                              >  SRR4302543.4253093/1‑94 (MQ=60)
                                                                CTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGA                              <  SRR4302543.655214/94‑1 (MQ=60)
                                                                CTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGA                              >  SRR4302543.6302112/1‑94 (MQ=60)
                                                                CTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGA                              >  SRR4302543.7656406/1‑94 (MQ=60)
                                                                CTTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGA                              >  SRR4302543.7962130/1‑94 (MQ=60)
                                                                 TTATTGTTTAAAT‑CCTTCAGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGAT                             <  SRR4302543.83334/94‑1 (MQ=60)
                                                                 TTATTGGTTAAAT‑CCTTCGGGCGGTTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGAT                             <  SRR4302543.849348/94‑1 (MQ=60)
                                                                 TTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGAT                             >  SRR4302543.954502/1‑94 (MQ=60)
                                                                 TTATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGAT                             >  SRR4302543.5772508/1‑94 (MQ=60)
                                                                  TATTGTTTAAAT‑CTTTCGGGAGGGTACCGCTTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATC                            <  SRR4302543.5954432/94‑1 (MQ=60)
                                                                  TATTGGTTAAAT‑CCTTCGGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATC                            <  SRR4302543.4295623/94‑1 (MQ=60)
                                                                   TTTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCG                           <  SRR4302543.2482383/94‑1 (MQ=60)
                                                                   ATTGGTTNAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCG                           >  SRR4302543.4576592/1‑94 (MQ=60)
                                                                   ATTGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCG                           <  SRR4302543.2291634/94‑1 (MQ=60)
                                                                   ATTGGTTAAAC‑CCTTCAGGCGGGCACCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCG                           <  SRR4302543.1489570/94‑1 (MQ=60)
                                                                     TGGTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTT                         >  SRR4302543.4188431/1‑94 (MQ=60)
                                                                       GTTAATT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCT                       <  SRR4302543.844704/94‑1 (MQ=60)
                                                                       GTTAAAT‑CCTTCGGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCT                       <  SRR4302543.4815064/94‑1 (MQ=60)
                                                                       GTTAAAT‑CCTTCAGGCGGGTCCCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCT                       <  SRR4302543.2256035/94‑1 (MQ=60)
                                                                       GTTAAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCT                       >  SRR4302543.6730822/1‑94 (MQ=60)
                                                                         TAAAT‑CCTTCGGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTC                     <  SRR4302543.6451020/94‑1 (MQ=60)
                                                                          AAAT‑CTTTCAGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCT                    <  SRR4302543.4190287/94‑1 (MQ=60)
                                                                          AAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCT                    <  SRR4302543.4153783/94‑1 (MQ=60)
                                                                          AAAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCT                    >  SRR4302543.2636201/1‑94 (MQ=60)
                                                                           AAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTC                   >  SRR4302543.549451/1‑94 (MQ=60)
                                                                           AAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTC                   >  SRR4302543.4398797/1‑94 (MQ=60)
                                                                           AAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTC                   >  SRR4302543.4330170/1‑94 (MQ=60)
                                                                           AAT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGCGATCGTTCTTCTC                   >  SRR4302543.4330171/1‑94 (MQ=60)
                                                                            AT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCT                  >  SRR4302543.2646198/1‑94 (MQ=60)
                                                                            AT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCT                  <  SRR4302543.7510196/94‑1 (MQ=60)
                                                                            AT‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCT                  >  SRR4302543.2100232/1‑94 (MQ=60)
                                                                             T‑CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTA                 >  SRR4302543.7005127/1‑94 (MQ=60)
                                                                             C‑CCTTCAGGCGTGTCCCCCGCCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTA                 <  SRR4302543.6084394/94‑1 (MQ=60)
                                                                               CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAA                >  SRR4302543.747021/1‑94 (MQ=60)
                                                                               CCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAA                >  SRR4302543.6943258/1‑94 (MQ=60)
                                                                                CTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAA               >  SRR4302543.3489430/1‑94 (MQ=60)
                                                                                CTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAA               >  SRR4302543.3489428/1‑94 (MQ=60)
                                                                                CTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAA               >  SRR4302543.3204902/1‑94 (MQ=60)
                                                                                CTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTACAATGGCAGCTGGCGCGCCAACATTAAGTGATTGTTCTTCTCTAAA               >  SRR4302543.7169475/1‑94 (MQ=60)
                                                                                   CAGGCGGGTCCCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTA            <  SRR4302543.2982442/94‑1 (MQ=60)
                                                                                   CAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTA            >  SRR4302543.5682756/1‑94 (MQ=60)
                                                                                   CAGGCGGGTACCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTA            <  SRR4302543.6590259/94‑1 (MQ=60)
                                                                                    AGGCGGGTCCCGCCTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAA           <  SRR4302543.5881756/94‑1 (MQ=60)
                                                                                    AGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAA           >  SRR4302543.3372690/1‑94 (MQ=60)
                                                                                    AGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAA           >  SRR4302543.3072912/1‑94 (MQ=60)
                                                                                    AGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAA           >  SRR4302543.20559/1‑94 (MQ=60)
                                                                                     GGCGGGTCCCGCGCCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAAC          <  SRR4302543.5960595/94‑1 (MQ=60)
                                                                                     GGCGGGTACCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAAC          <  SRR4302543.3127944/94‑1 (MQ=60)
                                                                                      GCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACC         <  SRR4302543.5455234/94‑1 (MQ=60)
                                                                                      GCGGGTACCCCGCCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACC         <  SRR4302543.4443663/94‑1 (MQ=60)
                                                                                       CGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCA        >  SRR4302543.5196008/1‑94 (MQ=60)
                                                                                       CGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCA        >  SRR4302543.5233266/1‑94 (MQ=60)
                                                                                        GGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCAT       >  SRR4302543.6268116/1‑94 (MQ=60)
                                                                                        GGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCAT       >  SRR4302543.1457890/1‑94 (MQ=60)
                                                                                        GGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCAT       >  SRR4302543.4118538/1‑94 (MQ=60)
                                                                                         GGTCCCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATG      <  SRR4302543.7316372/94‑1 (MQ=60)
                                                                                         GGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATG      <  SRR4302543.2710702/94‑1 (MQ=60)
                                                                                          GTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGA     >  SRR4302543.3514852/1‑94 (MQ=60)
                                                                                           TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATTGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGAC    <  SRR4302543.4664875/94‑1 (MQ=60)
                                                                                           TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGAC    <  SRR4302543.6626725/94‑1 (MQ=60)
                                                                                           TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGAC    >  SRR4302543.4509363/1‑94 (MQ=60)
                                                                                           TACCCCGCCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGAC    <  SRR4302543.6732822/94‑1 (MQ=60)
                                                                                           TACCCCGCCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGAC    <  SRR4302543.3854121/94‑1 (MQ=60)
                                                                                            ACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGACT   >  SRR4302543.256421/1‑94 (MQ=60)
                                                                                            ACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGACT   <  SRR4302543.481943/94‑1 (MQ=60)
                                                                                            ACCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGACT   <  SRR4302543.4975594/94‑1 (MQ=60)
                                                                                             CCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGACTA  >  SRR4302543.1038598/1‑94 (MQ=60)
                                                                                               |                                                                                           
GTTAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTT‑TTGCTCGCTTATTGGTTAAAT‑CCTTCAGGCGGGTACCACGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGACTA  >  NC_000913/3566782‑3566966

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑