Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,572,523 (T)7→6 intergenic (‑12/‑181) asd ← / → yhgN aspartate‑semialdehyde dehydrogenase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,572,5170T.100.0% 1581.4 / NA 348intergenic (‑6/‑187)asd/yhgNaspartate‑semialdehyde dehydrogenase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (194/154);  total (194/154)

Only 100 of 401 total aligned reads displayed.

GGCGTCGAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAA  >  NC_000913/3572425‑3572605
                                                                                            |                                                                                        
ggCGTCGAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGt                                                                                          >  1:5188615/1‑93 (MQ=255)
ggCGTCAAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGt                                                                                          <  2:2870934/93‑1 (MQ=255)
gccGTCGAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCAACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGt                                                                                          <  2:503564/91‑1 (MQ=255)
 gCGTCGAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGtt                                                                                         >  2:2033653/1‑93 (MQ=255)
  gctCGAAGTCGCCCTCTTCAACCGTGCGTTGCATGAGAACGGAGCCGACCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGttt                                                                                        <  2:4284564/91‑1 (MQ=255)
  cgccGAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGttt                                                                                        <  1:5323393/90‑1 (MQ=255)
  cctCGAAGCCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCAGACCATCCCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCGttt                                                                                        <  1:7098212/91‑1 (MQ=255)
  cGTCGAAGTCGCGCTCTTCAACCATGCTTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGttt                                                                                        <  1:3282302/93‑1 (MQ=255)
  cGTCGAAGTCGCGCTCTTCAACCATGAGTTGCATGAGAACGGACCCGACCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGttt                                                                                        <  1:4744849/93‑1 (MQ=255)
    tCGAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGttttt                                                                                      >  2:6734542/1‑93 (MQ=255)
    tCGAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGttttt                                                                                      >  2:4633182/1‑93 (MQ=255)
     cGAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGtttttt                                                                                     >  1:5370189/1‑93 (MQ=255)
      gAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGttttttc                                                                                    >  2:1095456/1‑92 (MQ=255)
         gTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGttttttcctg                                                                                 >  1:4365989/1‑89 (MQ=255)
           cgcgCTCTTCAACAATGGTTTGCATGAGAACGGAGCCGACAATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCa                                                                              <  2:7769310/93‑1 (MQ=255)
            gcgcTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCaa                                                                             >  1:655797/1‑93 (MQ=255)
            gcgcTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCaa                                                                             >  2:3945309/1‑93 (MQ=255)
             cgcTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCaaa                                                                            >  2:294452/1‑93 (MQ=255)
             cgcTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCaaa                                                                            >  2:3273334/1‑93 (MQ=255)
             cgcTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCaaa                                                                            >  1:304633/1‑93 (MQ=255)
               ctctTCACCCATGGGTTGCTTGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGa                                                                          <  1:3821133/93‑1 (MQ=255)
               ctctTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGa                                                                          >  1:6862910/1‑93 (MQ=255)
               ctctACAACCATGCGTGGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGa                                                                          <  2:4746500/93‑1 (MQ=255)
               cctgtCAACCATGAGTGGTTGGAGAAGGGAGCCAACCATCCTGCGCCAGCCGATAAAACCAGCATTTTTCATAAGCG‑TTTTTTCCTGCAAAGa                                                                          <  2:385725/89‑1 (MQ=255)
                 ctTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGAtg                                                                        >  1:257814/1‑93 (MQ=255)
                 ctTCAACCATGCGTTGCATGAAAACGGAGCCGACCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGAtg                                                                        <  1:6264445/93‑1 (MQ=255)
                  ttCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGAtgt                                                                       >  1:5071910/1‑93 (MQ=255)
                   tCAACCATGCGTTGCATGAGACCGGAGCCGACCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGAtgtg                                                                      <  1:4607782/93‑1 (MQ=255)
                   tCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGAtgtg                                                                      >  2:6655044/1‑93 (MQ=255)
                   tCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGAtgtg                                                                      >  2:7157474/1‑93 (MQ=255)
                    taaCCATGCGTTGCAGGAGAAGGGAGCCGACTATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGAtgtgt                                                                     <  2:6273947/92‑1 (MQ=255)
                        cATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTg                                                                 >  2:5273875/1‑93 (MQ=255)
                           gCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGtat                                                              <  1:2178749/93‑1 (MQ=255)
                             gTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATaa                                                            >  2:134414/1‑93 (MQ=255)
                             gTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATaa                                                            >  1:5473336/1‑93 (MQ=255)
                              ttGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCCAAGATGTGTGCTGTATaaa                                                           >  2:4380902/1‑93 (MQ=255)
                               tGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAAt                                                          >  2:4718414/1‑93 (MQ=255)
                               tGCATGAGAACGGACCCGACCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAAt                                                          <  2:7853514/93‑1 (MQ=255)
                                gCATGAGACGGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAAtg                                                         <  1:6139378/93‑1 (MQ=255)
                                 cATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAAtgt                                                        <  2:2731235/93‑1 (MQ=255)
                                 cATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAAtgt                                                        <  1:3557179/93‑1 (MQ=255)
                                 cATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAAtgt                                                        >  1:2899567/1‑93 (MQ=255)
                                 aaTGAGAACGGACCCGACCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAAtgt                                                        <  2:6175690/92‑1 (MQ=255)
                                      gacgggAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCgg                                                   <  2:3806376/89‑1 (MQ=255)
                                      gaACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCgg                                                   >  1:842728/1‑93 (MQ=255)
                                       aaCGGAGCCGCCCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGt                                                  <  2:2798344/93‑1 (MQ=255)
                                                 aCCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTgg                                        >  1:986665/1‑93 (MQ=255)
                                                 aCCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTgg                                        >  1:4669765/1‑93 (MQ=255)
                                                  ccATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGc                                       <  1:4823311/93‑1 (MQ=255)
                                                     tcccGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGcaca                                    <  1:7539351/91‑1 (MQ=255)
                                                     tACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGcaca                                    >  1:1395647/1‑93 (MQ=255)
                                                     tACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGcaca                                    >  1:6409951/1‑93 (MQ=255)
                                                      aCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACAt                                   >  2:3662661/1‑93 (MQ=255)
                                                         ccgcCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCtt                                <  1:5848969/92‑1 (MQ=255)
                                                          cgcCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCttt                               <  1:4094207/93‑1 (MQ=255)
                                                          cgcCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCttt                               <  2:7721817/93‑1 (MQ=255)
                                                           gcCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTc                              <  2:2560149/93‑1 (MQ=255)
                                                           gcCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTc                              >  2:3132033/1‑93 (MQ=255)
                                                           cccAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTc                              <  1:566849/92‑1 (MQ=255)
                                                            ccAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCa                             <  1:6312332/93‑1 (MQ=255)
                                                             cAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCAc                            >  1:3927677/1‑93 (MQ=255)
                                                               gCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCa                          <  1:2314717/93‑1 (MQ=255)
                                                                  gATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATAc                       >  2:2239224/1‑93 (MQ=255)
                                                                  gATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATAc                       >  2:4875470/1‑93 (MQ=255)
                                                                  gATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATAc                       <  1:1778911/93‑1 (MQ=255)
                                                                  gATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATAc                       >  1:124671/1‑93 (MQ=255)
                                                                  gATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATAc                       >  2:5549057/1‑93 (MQ=255)
                                                                   aTAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACa                      <  2:7347320/93‑1 (MQ=255)
                                                                    tAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACaa                     >  2:3459340/1‑93 (MQ=255)
                                                                     aaaaCCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACaaa                    >  2:1916453/1‑93 (MQ=255)
                                                                     aaaaCCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACaaa                    >  1:161255/1‑93 (MQ=255)
                                                                      aaaCCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACaaaa                   >  2:1687270/1‑93 (MQ=255)
                                                                      aaaCCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACaaaa                   >  1:3152751/1‑93 (MQ=255)
                                                                        aCCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAag                 <  1:3724210/93‑1 (MQ=255)
                                                                        aCCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACAACTTTCACCATACAAAAag                 >  1:7686667/1‑93 (MQ=255)
                                                                         ccAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACACAAagc                >  2:4454665/1‑93 (MQ=255)
                                                                         ccAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagc                >  2:5811528/1‑93 (MQ=255)
                                                                         ccAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagc                <  1:7856460/93‑1 (MQ=255)
                                                                         ccAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagc                <  1:3418459/93‑1 (MQ=255)
                                                                         ccAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagc                >  1:1845629/1‑93 (MQ=255)
                                                                          cAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCCCCATACAAAAagca               <  2:5992422/93‑1 (MQ=255)
                                                                          cAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagca               >  1:425549/1‑93 (MQ=255)
                                                                          cAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagca               <  1:4941378/93‑1 (MQ=255)
                                                                           aaCATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagcag              <  2:1514903/93‑1 (MQ=255)
                                                                            aCATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagcagc             >  2:641027/1‑93 (MQ=255)
                                                                            aCATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagcagc             >  2:5918303/1‑93 (MQ=255)
                                                                              aTTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCa           >  1:1925107/1‑93 (MQ=255)
                                                                              aTTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCa           >  1:3199144/1‑93 (MQ=255)
                                                                              aTTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCa           >  2:4140123/1‑93 (MQ=255)
                                                                               tttttCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCaa          >  1:2805848/1‑93 (MQ=255)
                                                                               tttttCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCaa          >  1:6727668/1‑93 (MQ=255)
                                                                                ttttCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCaaa         <  2:5247907/93‑1 (MQ=255)
                                                                                 tttCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAg        <  2:5706487/93‑1 (MQ=255)
                                                                                  ttCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGt       <  2:744943/93‑1 (MQ=255)
                                                                                  ttCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGCTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGt       <  1:5561103/93‑1 (MQ=255)
                                                                                    cATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCg     >  2:1760893/1‑93 (MQ=255)
                                                                                     aTAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGc    <  1:7379966/93‑1 (MQ=255)
                                                                                      tAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCa   >  1:213169/1‑93 (MQ=255)
                                                                                      tAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCa   >  2:6932243/1‑93 (MQ=255)
                                                                                       aaGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCaa  <  2:2657962/93‑1 (MQ=255)
                                                                                            |                                                                                        
GGCGTCGAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAA  >  NC_000913/3572425‑3572605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 208 total aligned reads displayed.
CGAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTGAAATTAAT  >  NC_000913/3572430‑3572616
                                                                                              |                                                                                             
CGAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTC                                                                                               >  SRR4302543.3001080/1‑94 (MQ=60)
  AAGTCGCGCTCTTCACCCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCT                                                                                            <  SRR4302543.1814316/94‑1 (MQ=60)
  AAGCCGCCCTCTTCAACCAGGCGTTGCATGAGAACGGACCCGA‑CCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCT                                                                                            <  SRR4302543.4419904/94‑1 (MQ=60)
   AGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTG                                                                                           >  SRR4302543.4405537/1‑94 (MQ=60)
      cggcCTCTTCAACCAGGCGTTGCATGAGAACGGA‑CCGACCCATACCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAA                                                                                        <  SRR4302543.6366624/90‑1 (MQ=60)
      CGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAA                                                                                        >  SRR4302543.661806/1‑94 (MQ=60)
      CGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAA                                                                                        >  SRR4302543.5731787/1‑94 (MQ=60)
       GCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAA                                                                                       >  SRR4302543.307385/1‑94 (MQ=60)
       GCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTCCAAA                                                                                       >  SRR4302543.2509742/1‑94 (MQ=60)
        CGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAG                                                                                      >  SRR4302543.4804777/1‑94 (MQ=60)
        CGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAG                                                                                      >  SRR4302543.1447309/1‑94 (MQ=60)
        CGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAG                                                                                      >  SRR4302543.814724/1‑94 (MQ=60)
        CGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAG                                                                                      >  SRR4302543.4761691/1‑94 (MQ=60)
        CGCTCTTCAACCATGCGTTGCATGAAACGGGAGCCGC‑CCATACCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAG                                                                                      <  SRR4302543.7046688/94‑1 (MQ=60)
        CGCTCTTCAACCATGCGTTGAATGAGAACGGAGCCGA‑CCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAG                                                                                      <  SRR4302543.2758031/94‑1 (MQ=60)
         GCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGA                                                                                     >  SRR4302543.3241212/1‑94 (MQ=60)
         GCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGA                                                                                     >  SRR4302543.6927577/1‑94 (MQ=60)
         GCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGA                                                                                     >  SRR4302543.3822029/1‑94 (MQ=60)
          CTCTTCACCCATGGGTTGCTTGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGAT                                                                                    <  SRR4302543.3854827/94‑1 (MQ=60)
          CTCTTCACCCAGGCGTTGCATGAGAACGGAGCGGA‑CGATACCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGAT                                                                                    <  SRR4302543.6450288/94‑1 (MQ=60)
          CTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGAT                                                                                    >  SRR4302543.996353/1‑94 (MQ=60)
          CTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGAT                                                                                    >  SRR4302543.7862388/1‑94 (MQ=60)
          CTCTTCAACCATGCGTTGCATGAGAACGGACCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGAT                                                                                    <  SRR4302543.7544000/94‑1 (MQ=60)
          CTCTCCAACCATGCGTGGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGAT                                                                                    <  SRR4302543.1265814/94‑1 (MQ=60)
           TCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATG                                                                                   >  SRR4302543.260068/1‑94 (MQ=60)
            CTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGT                                                                                  <  SRR4302543.6454899/94‑1 (MQ=60)
            CTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGT                                                                                  >  SRR4302543.6846931/1‑94 (MQ=60)
            CTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGT                                                                                  >  SRR4302543.6852997/1‑94 (MQ=60)
            CTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGT                                                                                  >  SRR4302543.5117941/1‑94 (MQ=60)
            CTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGT                                                                                  >  SRR4302543.5010153/1‑94 (MQ=60)
            CTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGT                                                                                  >  SRR4302543.3911652/1‑94 (MQ=60)
            CTTCAACCAGGCGTTGCATAAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGT                                                                                  <  SRR4302543.1856414/94‑1 (MQ=60)
             TTCAACCATGCGTTGCATGAGAACGGACCCGA‑CCATCCCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTG                                                                                 <  SRR4302543.2152492/94‑1 (MQ=60)
             TTCAACCATGCGTTGCATGAAAACGAACCCGA‑CCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTG                                                                                 <  SRR4302543.2454348/94‑1 (MQ=60)
              TCAACCATGCGTTGCATGAGACCGGAGCCGA‑CCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGT                                                                                <  SRR4302543.4649634/94‑1 (MQ=60)
               tcaccttcacgcagcatgagaacggaccctgcttccCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGT                                                                                <  SRR4302543.4978799/58‑1 (MQ=60)
               CACCCATGCGTTGCATGAGAGCGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTG                                                                               <  SRR4302543.4356626/94‑1 (MQ=60)
               CACCCACGCGTTTCATGAGAACGGAGCCGA‑CCATTCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTG                                                                               <  SRR4302543.2162790/94‑1 (MQ=60)
                AACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGC                                                                              >  SRR4302543.7321869/1‑94 (MQ=60)
                AACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGC                                                                              >  SRR4302543.6635914/1‑94 (MQ=60)
                AACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGC                                                                              >  SRR4302543.7960899/1‑94 (MQ=60)
                 ACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCT                                                                             >  SRR4302543.4283015/1‑94 (MQ=60)
                  CGATGCGTTGCATGAGAACGGAGCCGC‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTG                                                                            <  SRR4302543.3326729/94‑1 (MQ=60)
                  CCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTG                                                                            >  SRR4302543.6326699/1‑94 (MQ=60)
                  CCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGGGTGCTG                                                                            >  SRR4302543.6326698/1‑94 (MQ=60)
                   CATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGT                                                                           >  SRR4302543.6392540/1‑94 (MQ=60)
                   CATGCGTGGCAGGAGAACGAACCCAA‑CCATCCCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGT                                                                           <  SRR4302543.2322443/94‑1 (MQ=59)
                    ATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTA                                                                          >  SRR4302543.339318/1‑94 (MQ=60)
                      GCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATA                                                                        <  SRR4302543.2198278/94‑1 (MQ=60)
                       CGTTGCATGAGAAGGGAGCCGA‑CCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAA                                                                       <  SRR4302543.3893866/94‑1 (MQ=60)
                       CGTTGCATGAGAACGGAGCCGA‑CCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTTTAA                                                                       <  SRR4302543.1754207/94‑1 (MQ=60)
                       CGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAA                                                                       >  SRR4302543.5522926/1‑94 (MQ=60)
                       CGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAA                                                                       >  SRR4302543.6470550/1‑94 (MQ=60)
                       CGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCAGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAA                                                                       <  SRR4302543.4498789/94‑1 (MQ=60)
                       CGTTGCAGGAGAACGGACCCGA‑CCATCCCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAA                                                                       <  SRR4302543.1920495/94‑1 (MQ=60)
                        GTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAA                                                                      >  SRR4302543.7392449/1‑94 (MQ=60)
                        GTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAA                                                                      >  SRR4302543.4039844/1‑94 (MQ=60)
                        GTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAA                                                                      >  SRR4302543.6550780/1‑94 (MQ=60)
                         TTGCATGAGAAGGGGGCCCA‑CCATGCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAAT                                                                     <  SRR4302543.1994307/94‑1 (MQ=60)
                         TTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAAT                                                                     <  SRR4302543.2346596/94‑1 (MQ=60)
                          TGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATG                                                                    >  SRR4302543.3650651/1‑94 (MQ=60)
                           GCATGAGACGGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGT                                                                   <  SRR4302543.6197529/94‑1 (MQ=60)
                           GCATGAGAACGGAGCCGC‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGT                                                                   <  SRR4302543.5384311/94‑1 (MQ=60)
                           GCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGT                                                                   >  SRR4302543.2925929/1‑94 (MQ=60)
                            CATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTG                                                                  <  SRR4302543.3588696/94‑1 (MQ=60)
                            CAAGAAAACGGAACCGA‑CCATACCCCCCCAGGCGATAAAACCCACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTG                                                                  <  SRR4302543.4078874/94‑1 (MQ=60)
                             ATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGC                                                                 >  SRR4302543.4400536/1‑94 (MQ=60)
                             ATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGC                                                                 <  SRR4302543.3150784/94‑1 (MQ=60)
                             ATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGC                                                                 >  SRR4302543.5090473/1‑94 (MQ=60)
                                AGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGG                                                              >  SRR4302543.850180/1‑94 (MQ=60)
                                AGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGG                                                              >  SRR4302543.2010710/1‑94 (MQ=60)
                                  AACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTC                                                            >  SRR4302543.557063/1‑94 (MQ=60)
                                   ACGGAGCCGC‑CCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCT                                                           <  SRR4302543.6623406/94‑1 (MQ=60)
                                   ACGGAGCCGA‑CCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCT                                                           <  SRR4302543.7944143/94‑1 (MQ=60)
                                    CGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTC                                                          >  SRR4302543.4810037/1‑94 (MQ=60)
                                     GGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCC                                                         >  SRR4302543.7881/1‑94 (MQ=60)
                                      GACCCGA‑CCATACCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCT                                                        <  SRR4302543.4660360/94‑1 (MQ=60)
                                       AGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTC                                                       >  SRR4302543.319173/1‑94 (MQ=60)
                                       AGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTC                                                       >  SRR4302543.5160444/1‑94 (MQ=60)
                                         CCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTT                                                     >  SRR4302543.763590/1‑94 (MQ=60)
                                          CGA‑CCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTG                                                    <  SRR4302543.2225795/94‑1 (MQ=60)
                                           GC‑CCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGG                                                   <  SRR4302543.4020337/94‑1 (MQ=60)
                                           GA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGG                                                   >  SRR4302543.7552947/1‑94 (MQ=60)
                                           GA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGG                                                   >  SRR4302543.995371/1‑94 (MQ=60)
                                           GA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGG                                                   >  SRR4302543.4712328/1‑94 (MQ=60)
                                           GA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGG                                                   >  SRR4302543.4878031/1‑94 (MQ=60)
                                            aactatcccgccCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGG                                                   <  SRR4302543.4950235/82‑1 (MQ=60)
                                            A‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGCCTCCTCTTGGC                                                  >  SRR4302543.5323069/1‑94 (MQ=60)
                                              acatcCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCA                                                 <  SRR4302543.4199970/89‑1 (MQ=60)
                                              CCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCA                                                 <  SRR4302543.4867332/94‑1 (MQ=60)
                                              CCATACCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCA                                                 <  SRR4302543.3677162/94‑1 (MQ=60)
                                              CCATACCCCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCA                                                 <  SRR4302543.6590290/94‑1 (MQ=60)
                                                ATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACA                                               >  SRR4302543.1408226/1‑94 (MQ=60)
                                                ATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACA                                               >  SRR4302543.599194/1‑94 (MQ=60)
                                                ATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACA                                               >  SRR4302543.6470315/1‑94 (MQ=60)
                                                 cacccccCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACAT                                              <  SRR4302543.7611217/87‑1 (MQ=60)
                                                 TCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACAT                                              <  SRR4302543.1382014/94‑1 (MQ=60)
                                                 TCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACAT                                              <  SRR4302543.7611216/94‑1 (MQ=60)
                                                 TACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTTTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACAT                                              >  SRR4302543.5570937/1‑94 (MQ=60)
                                                  CCCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATC                                             <  SRR4302543.222397/94‑1 (MQ=60)
                                                  ACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATC                                             >  SRR4302543.4637452/1‑94 (MQ=60)
                                                  ACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATC                                             <  SRR4302543.4833109/94‑1 (MQ=60)
                                                  ACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATC                                             >  SRR4302543.7712028/1‑94 (MQ=60)
                                                  ACCCCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATC                                             <  SRR4302543.5414584/94‑1 (MQ=60)
                                                   CCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCTAAGTTGTGTGCTGTATAAATGTGCGGGTCTACTCTTGGCACATCT                                            <  SRR4302543.2720412/94‑1 (MQ=60)
                                                    CGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTT                                           >  SRR4302543.1806699/1‑94 (MQ=60)
                                                    CGCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTT                                           >  SRR4302543.1920776/1‑94 (MQ=60)
                                                     GCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTT                                          <  SRR4302543.92177/94‑1 (MQ=60)
                                                     CCGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTT                                          <  SRR4302543.5902193/94‑1 (MQ=60)
                                                      CGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTC                                         <  SRR4302543.4130943/94‑1 (MQ=60)
                                                      CGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTC                                         >  SRR4302543.3832718/1‑94 (MQ=60)
                                                      CGCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTC                                         >  SRR4302543.871105/1‑94 (MQ=60)
                                                      CCCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTC                                         <  SRR4302543.7681730/94‑1 (MQ=60)
                                                       GCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCA                                        >  SRR4302543.6001196/1‑94 (MQ=60)
                                                       CCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCA                                        <  SRR4302543.572037/94‑1 (MQ=60)
                                                       CCCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCA                                        <  SRR4302543.513679/94‑1 (MQ=60)
                                                        CCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCAC                                       <  SRR4302543.6371699/94‑1 (MQ=60)
                                                        CCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCAC                                       >  SRR4302543.4372894/1‑94 (MQ=60)
                                                        CCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCAC                                       >  SRR4302543.3962346/1‑94 (MQ=60)
                                                        CCAGCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCAC                                       >  SRR4302543.6255552/1‑94 (MQ=60)
                                                           GCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCAT                                    <  SRR4302543.2335769/94‑1 (MQ=60)
                                                           GCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCAT                                    <  SRR4302543.491115/94‑1 (MQ=60)
                                                           GCCGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCAT                                    <  SRR4302543.3131673/94‑1 (MQ=60)
                                                             CGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATAC                                  >  SRR4302543.6212489/1‑94 (MQ=60)
                                                             CGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATAC                                  <  SRR4302543.5879473/94‑1 (MQ=60)
                                                             CGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATAC                                  >  SRR4302543.125798/1‑94 (MQ=60)
                                                             CGATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATAC                                  >  SRR4302543.3764223/1‑94 (MQ=60)
                                                             CGATAAAACCAACATTTTTCATAAGCG‑TTTTGTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATAC                                  <  SRR4302543.5879472/94‑1 (MQ=60)
                                                              GATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACA                                 >  SRR4302543.56179/1‑94 (MQ=60)
                                                              GATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACA                                 <  SRR4302543.1794808/94‑1 (MQ=60)
                                                               ATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAA                                >  SRR4302543.7081827/1‑94 (MQ=60)
                                                               ATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAA                                >  SRR4302543.3581250/1‑94 (MQ=60)
                                                               ATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAA                                >  SRR4302543.4153872/1‑94 (MQ=60)
                                                               ATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAA                                >  SRR4302543.2881443/1‑94 (MQ=60)
                                                               ATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAA                                >  SRR4302543.7590428/1‑94 (MQ=60)
                                                               ATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAA                                >  SRR4302543.4881766/1‑94 (MQ=60)
                                                               ATAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAA                                >  SRR4302543.2792914/1‑94 (MQ=60)
                                                                TAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAA                               >  SRR4302543.4041845/1‑94 (MQ=60)
                                                                TAAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAA                               >  SRR4302543.162646/1‑94 (MQ=60)
                                                                 AAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAA                              >  SRR4302543.1389394/1‑94 (MQ=60)
                                                                 AAAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAA                              >  SRR4302543.3181123/1‑94 (MQ=60)
                                                                  AAACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCTCATCTTTCACCATACAAAAA                             <  SRR4302543.877834/94‑1 (MQ=60)
                                                                   AACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAG                            >  SRR4302543.7759460/1‑94 (MQ=60)
                                                                   AACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAG                            <  SRR4302543.3436740/94‑1 (MQ=60)
                                                                   AACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACAACTTTCACCATACAAAAAG                            >  SRR4302543.7759459/1‑94 (MQ=60)
                                                                    ACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGC                           >  SRR4302543.1862225/1‑94 (MQ=60)
                                                                    ACCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGC                           <  SRR4302543.3756959/94‑1 (MQ=60)
                                                                     CCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCA                          <  SRR4302543.4771441/94‑1 (MQ=60)
                                                                     CCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCA                          <  SRR4302543.7930472/94‑1 (MQ=60)
                                                                     CCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCA                          >  SRR4302543.429535/1‑94 (MQ=60)
                                                                     CCAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCA                          <  SRR4302543.3449055/94‑1 (MQ=60)
                                                                      CAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTTCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAG                         >  SRR4302543.7111944/1‑94 (MQ=60)
                                                                      CAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAG                         <  SRR4302543.5710789/94‑1 (MQ=60)
                                                                      CAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAG                         <  SRR4302543.4986374/94‑1 (MQ=60)
                                                                      CAACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAG                         <  SRR4302543.5458814/94‑1 (MQ=60)
                                                                       AACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGC                        >  SRR4302543.3206894/1‑94 (MQ=60)
                                                                       AACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGC                        >  SRR4302543.1561606/1‑94 (MQ=60)
                                                                        ACATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCC                       >  SRR4302543.6845767/1‑94 (MQ=60)
                                                                         CATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCA                      >  SRR4302543.1942455/1‑94 (MQ=60)
                                                                         CATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCA                      >  SRR4302543.3227989/1‑94 (MQ=60)
                                                                         CATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCA                      <  SRR4302543.1491813/94‑1 (MQ=60)
                                                                          ATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAA                     >  SRR4302543.2831519/1‑94 (MQ=60)
                                                                          ATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAA                     <  SRR4302543.5660010/94‑1 (MQ=60)
                                                                          ATTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAA                     >  SRR4302543.6791231/1‑94 (MQ=60)
                                                                          ATTTTTCATAAGCG‑CTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAA                     >  SRR4302543.3661462/1‑94 (MQ=60)
                                                                           TTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAA                    <  SRR4302543.5320302/94‑1 (MQ=60)
                                                                           TTTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAA                    >  SRR4302543.3535632/1‑94 (MQ=60)
                                                                            TTTTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAG                   >  SRR4302543.3488137/1‑94 (MQ=60)
                                                                              TTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACGTCTTTCACCATACAAAAAGCAGCCAAAGTC                 >  SRR4302543.3042310/1‑94 (MQ=60)
                                                                              TTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTC                 >  SRR4302543.5224391/1‑94 (MQ=60)
                                                                              TTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTC                 >  SRR4302543.4657607/1‑94 (MQ=60)
                                                                              TTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTC                 <  SRR4302543.2075158/94‑1 (MQ=60)
                                                                              TTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTC                 >  SRR4302543.6276025/1‑94 (MQ=60)
                                                                              TTCATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGCTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTC                 <  SRR4302543.5611677/94‑1 (MQ=60)
                                                                                CATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGC               >  SRR4302543.3220136/1‑94 (MQ=60)
                                                                                CATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGC               >  SRR4302543.5999561/1‑94 (MQ=60)
                                                                                CATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGC               >  SRR4302543.2840995/1‑94 (MQ=60)
                                                                                 ATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCA              >  SRR4302543.214991/1‑94 (MQ=60)
                                                                                 ATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCA              >  SRR4302543.1907391/1‑94 (MQ=60)
                                                                                 ATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCA              >  SRR4302543.3051518/1‑94 (MQ=60)
                                                                                 ATAAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCA              <  SRR4302543.7450898/94‑1 (MQ=60)
                                                                                   AAGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAG            >  SRR4302543.2613832/1‑94 (MQ=60)
                                                                                    AGCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGT           <  SRR4302543.4341607/94‑1 (MQ=60)
                                                                                     GCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTG          <  SRR4302543.4237649/94‑1 (MQ=60)
                                                                                     GCG‑TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTG          <  SRR4302543.33816/94‑1 (MQ=60)
                                                                                       cgTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAACGCAGCCAAAGTCGCAAGTGA         >  SRR4302543.4215302/3‑94 (MQ=60)
                                                                                       cgTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTGA         >  SRR4302543.6698658/3‑94 (MQ=60)
                                                                                       cgTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTGA         <  SRR4302543.4248250/92‑1 (MQ=60)
                                                                                        GTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTGAA        >  SRR4302543.6391100/1‑94 (MQ=60)
                                                                                         TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTGAAA       >  SRR4302543.4616825/1‑94 (MQ=60)
                                                                                         TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTGAAA       >  SRR4302543.529703/1‑94 (MQ=60)
                                                                                         TTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTGAAA       >  SRR4302543.4696889/1‑94 (MQ=60)
                                                                                         GTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAGGCCGC‑AGTGAAAT      >  SRR4302543.5412420/1‑94 (MQ=60)
                                                                                          TTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTGAAAT      >  SRR4302543.6221130/1‑94 (MQ=60)
                                                                                          TTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTGAAAT      <  SRR4302543.5444902/94‑1 (MQ=60)
                                                                                            TTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTGAAATTA    >  SRR4302543.1397683/1‑94 (MQ=60)
                                                                                             TTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTGAAATTAA   >  SRR4302543.711730/1‑94 (MQ=60)
                                                                                             TTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTGAAATTAA   <  SRR4302543.2878244/94‑1 (MQ=60)
                                                                                              TCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTGAAATTAAT  <  SRR4302543.1331208/94‑1 (MQ=60)
                                                                                              TCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTGAAATTAAT  <  SRR4302543.1000272/94‑1 (MQ=60)
                                                                                              |                                                                                             
CGAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGA‑CCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAAGTGAAATTAAT  >  NC_000913/3572430‑3572616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑