Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,649,511 G→A E197E (GAG→GAA)  yhiS → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,649,5110GA99.8% 1499.0 / ‑6.3 413E197E (GAG→GAA) yhiShypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base A (230/182);  total (231/182)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01

Only 100 of 420 total aligned reads displayed.

TAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAGCACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCGT  >  NC_000913/3649421‑3649600
                                                                                          |                                                                                         
tAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAAca                                                                                         >  1:966712/1‑93 (MQ=255)
  aTTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAAcaca                                                                                       <  2:1233447/93‑1 (MQ=255)
   ttttATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAg                                                                                      >  2:3896207/1‑93 (MQ=255)
   ttttATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTATATCAAAAAATGACGAAGTTATATATTGAACACAg                                                                                      <  2:5354934/93‑1 (MQ=255)
    tttATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGt                                                                                     <  1:6535040/93‑1 (MQ=255)
    tttATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGt                                                                                     <  2:3554880/93‑1 (MQ=255)
      tATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGa                                                                                   >  2:4178474/1‑93 (MQ=255)
      tATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGa                                                                                   <  1:2383896/93‑1 (MQ=255)
      tATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGa                                                                                   >  1:2627033/1‑93 (MQ=255)
       aTTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGaa                                                                                  >  1:4300012/1‑93 (MQ=255)
        ttGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGaaa                                                                                 <  2:6605414/93‑1 (MQ=255)
          gCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAAt                                                                               <  2:4013023/93‑1 (MQ=255)
            tGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATaa                                                                             <  1:3102499/93‑1 (MQ=255)
             gAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATaaa                                                                            >  2:4939706/1‑93 (MQ=255)
             gAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATaaa                                                                            <  2:7115657/93‑1 (MQ=255)
              aacaacGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATaaaa                                                                           <  1:5581024/93‑1 (MQ=255)
               acaacGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATaaaaa                                                                          <  1:3399938/93‑1 (MQ=255)
                 aacGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACa                                                                        >  1:2933447/1‑93 (MQ=255)
                 aacGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACa                                                                        >  1:1939458/1‑93 (MQ=255)
                  acGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAg                                                                       <  1:1735685/93‑1 (MQ=255)
                  acGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAg                                                                       >  2:1843183/1‑93 (MQ=255)
                     aGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGaa                                                                    >  1:2116479/1‑92 (MQ=255)
                     aGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGAt                                                                    <  1:4840494/93‑1 (MQ=255)
                     aGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGAt                                                                    >  2:6307440/1‑93 (MQ=255)
                      gCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATg                                                                   >  1:5819550/1‑93 (MQ=255)
                        tGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGaa                                                                 <  1:7448529/93‑1 (MQ=255)
                        tGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGaa                                                                 <  2:3707004/93‑1 (MQ=255)
                         gACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGaaa                                                                >  2:2603428/1‑93 (MQ=255)
                          aCTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAg                                                               >  1:5008737/1‑93 (MQ=255)
                            ttACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTc                                                             >  2:2273581/1‑93 (MQ=255)
                            ttACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTc                                                             >  1:5202195/1‑93 (MQ=255)
                            ttACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTc                                                             <  1:551039/93‑1 (MQ=255)
                              aCCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGACAACAGTGAAACTAAAAACAGGATGAAAGTCtt                                                           >  2:567621/1‑93 (MQ=255)
                              aCCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCtt                                                           >  2:59811/1‑93 (MQ=255)
                               ccAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCttt                                                          >  2:6075459/1‑93 (MQ=255)
                                cAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAACAACAGGCTGAAAGTCTTTg                                                         >  1:5791910/1‑93 (MQ=255)
                                cAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTg                                                         >  2:4142897/1‑93 (MQ=255)
                                  aCTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGcc                                                       >  2:3793109/1‑93 (MQ=255)
                                  aCTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGcc                                                       <  1:3829762/93‑1 (MQ=255)
                                   cTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCg                                                      >  1:1122989/1‑93 (MQ=255)
                                    tAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCgg                                                     >  1:6675430/1‑93 (MQ=255)
                                    tAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCgg                                                     >  2:1413922/1‑93 (MQ=255)
                                      atatAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGaa                                                   >  2:3347186/1‑93 (MQ=255)
                                       tataAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAAc                                                  >  2:3249279/1‑93 (MQ=255)
                                       tataAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAAc                                                  >  1:6207561/1‑93 (MQ=255)
                                       tataAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAAc                                                  <  1:4614829/93‑1 (MQ=255)
                                       tataAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAAc                                                  >  2:2131698/1‑93 (MQ=255)
                                         taAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCa                                                >  2:2678502/1‑93 (MQ=255)
                                          aaaaGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCaa                                               >  2:7383213/1‑93 (MQ=255)
                                           aaaGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAAc                                              >  1:5288158/1‑93 (MQ=255)
                                            aaGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACt                                             <  2:3623301/93‑1 (MQ=255)
                                             aGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACtt                                            >  2:606107/1‑93 (MQ=255)
                                               atatTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTa                                          <  1:6991785/93‑1 (MQ=255)
                                                tatTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTAt                                         >  1:4481273/1‑93 (MQ=255)
                                                 atTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTAtt                                        >  2:7872654/1‑93 (MQ=255)
                                                 atTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTAtt                                        >  1:2297336/1‑93 (MQ=255)
                                                  ttCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTg                                       <  2:7683386/93‑1 (MQ=255)
                                                  ttCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTg                                       >  1:7599798/1‑93 (MQ=255)
                                                  ttCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTAAAAATAAAAACAGGAAGAAAGTCTTTGCCGCAACCAACTTTAttt                                       >  2:5248340/1‑92 (MQ=255)
                                                   tCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGa                                      <  2:7535335/93‑1 (MQ=255)
                                                    cAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGAt                                     >  2:4585667/1‑93 (MQ=255)
                                                       aGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTc                                  >  2:4417550/1‑93 (MQ=255)
                                                       aGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTc                                  <  1:3988948/93‑1 (MQ=255)
                                                         ccTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCaa                                >  1:1578036/1‑93 (MQ=255)
                                                         ccTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCaa                                >  2:6538705/1‑93 (MQ=255)
                                                         ccTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCaa                                >  1:7420536/1‑93 (MQ=255)
                                                         ccTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCaa                                >  2:3824470/1‑93 (MQ=255)
                                                           tGTATCAAAAAATGACGAAGTTATATATTGAGCACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAata                              >  1:7846638/1‑93 (MQ=255)
                                                           tGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGACCCAACTTTATTGATTTCAata                              <  1:4196687/93‑1 (MQ=255)
                                                            gTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAatat                             >  2:6670254/1‑93 (MQ=255)
                                                            gTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAatat                             >  2:7276885/1‑93 (MQ=255)
                                                             tATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATg                            >  1:2879741/1‑93 (MQ=255)
                                                              aTCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATga                           <  1:7072607/93‑1 (MQ=255)
                                                               tCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATgac                          <  1:1291329/93‑1 (MQ=255)
                                                               tCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATgac                          >  2:3022049/1‑93 (MQ=255)
                                                               tCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATgac                          >  1:7127748/1‑93 (MQ=255)
                                                                 aaaaaaTGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATgacag                        <  1:2731497/93‑1 (MQ=255)
                                                                 aaaaaaTGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATgacag                        <  2:6847397/93‑1 (MQ=255)
                                                                  aaaaaTGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATgacagg                       >  1:5924871/1‑93 (MQ=255)
                                                                   aaaaTGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATgacagga                      >  1:5088211/1‑93 (MQ=255)
                                                                    aaaTGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATgacaggac                     >  1:1173310/1‑93 (MQ=255)
                                                                    aaaTGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATgacaggac                     >  2:2749763/1‑93 (MQ=255)
                                                                       tGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGa                  >  1:3681267/1‑93 (MQ=255)
                                                                       tGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGa                  <  1:3251154/93‑1 (MQ=255)
                                                                        gACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGaa                 >  2:2034860/1‑93 (MQ=255)
                                                                          cGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAAcc               <  1:329686/93‑1 (MQ=255)
                                                                           gAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCt              <  2:476087/93‑1 (MQ=255)
                                                                               ttATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTcc          >  1:3554544/1‑93 (MQ=255)
                                                                               ttATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTcc          <  1:6335394/93‑1 (MQ=255)
                                                                               ttATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTcc          <  2:4499571/93‑1 (MQ=255)
                                                                               ttATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGAcc          >  2:5131437/1‑93 (MQ=255)
                                                                                   atatTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGgt      <  1:1340290/93‑1 (MQ=255)
                                                                                    tatTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGgtt     >  2:4662019/1‑93 (MQ=255)
                                                                                    tatTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGgtt     >  2:5833775/1‑93 (MQ=255)
                                                                                    tatTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGgtt     >  2:244728/1‑93 (MQ=255)
                                                                                     atTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGgttc    >  1:544198/1‑93 (MQ=255)
                                                                                     atTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGgttc    <  2:1573998/93‑1 (MQ=255)
                                                                                       tGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGgttcgt  <  2:5502843/93‑1 (MQ=255)
                                                                                       tGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGgttcgt  >  2:1748075/1‑93 (MQ=255)
                                                                                       tGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGggtcgt  >  1:299873/1‑93 (MQ=255)
                                                                                          |                                                                                         
TAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAGCACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCGT  >  NC_000913/3649421‑3649600

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 220 total aligned reads displayed.
TACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAGCACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCGTTCTA  >  NC_000913/3649418‑3649604
                                                                                             |                                                                                             
TACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAA                                                                                               <  SRR4302543.4323951/94‑1 (MQ=60)
TACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAA                                                                                               <  SRR4302543.7303418/94‑1 (MQ=60)
  CTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACA                                                                                             <  SRR4302543.6740356/94‑1 (MQ=60)
   TAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACAC                                                                                            <  SRR4302543.3186692/94‑1 (MQ=60)
   TAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACAC                                                                                            >  SRR4302543.2756046/1‑94 (MQ=60)
   TAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACAC                                                                                            <  SRR4302543.3224625/94‑1 (MQ=60)
   TAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACAC                                                                                            <  SRR4302543.3224626/94‑1 (MQ=60)
   TAATGTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACAC                                                                                            <  SRR4302543.3051255/94‑1 (MQ=60)
    AATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACA                                                                                           >  SRR4302543.5865832/1‑94 (MQ=60)
     ATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAACAGATATTCAAAGCCTGTATAAAAACATGACGAAGTTATATCTTGCACACAG                                                                                          >  SRR4302543.5182569/1‑94 (MQ=60)
     ATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAG                                                                                          >  SRR4302543.1003121/1‑94 (MQ=60)
     ATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAG                                                                                          >  SRR4302543.3127465/1‑94 (MQ=60)
     ATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAG                                                                                          >  SRR4302543.3431492/1‑94 (MQ=60)
     ATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAG                                                                                          <  SRR4302543.7805246/94‑1 (MQ=60)
      TTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGT                                                                                         >  SRR4302543.2316318/1‑94 (MQ=60)
       TTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTG                                                                                        <  SRR4302543.6596557/94‑1 (MQ=60)
       TTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTG                                                                                        <  SRR4302543.491053/94‑1 (MQ=60)
       TTTATTGCTGAACAACGAGCTGAATTACAAACTGATATAAAAGATATTCAAAGCCTGTATCAAGAAATGACGAAGTTATATATTGAACACAGTG                                                                                        <  SRR4302543.7113704/94‑1 (MQ=60)
        TTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGA                                                                                       >  SRR4302543.2650806/1‑94 (MQ=60)
        TTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGA                                                                                       >  SRR4302543.2650805/1‑94 (MQ=60)
        TTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGA                                                                                       >  SRR4302543.5963266/1‑94 (MQ=60)
         TATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAA                                                                                      <  SRR4302543.2405479/94‑1 (MQ=60)
         TATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAA                                                                                      >  SRR4302543.4339083/1‑94 (MQ=60)
            TGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAAT                                                                                   <  SRR4302543.3306977/94‑1 (MQ=60)
              CTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAA                                                                                 <  SRR4302543.3882135/94‑1 (MQ=60)
               TGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAA                                                                                <  SRR4302543.3130402/94‑1 (MQ=60)
               TGAACAACGAGCTGACATACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAA                                                                                >  SRR4302543.4650814/1‑94 (MQ=60)
                GAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAA                                                                               >  SRR4302543.7397679/1‑94 (MQ=60)
                GAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAA                                                                               <  SRR4302543.4249952/94‑1 (MQ=60)
                 AACAAGGAGCTGACTTACCAAATAATATAAAAGATATTCTAAGACTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAA                                                                              >  SRR4302543.2986122/1‑94 (MQ=60)
                 AACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAA                                                                              <  SRR4302543.5631835/94‑1 (MQ=60)
                 AACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAA                                                                              >  SRR4302543.2986123/1‑94 (MQ=60)
                 AACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAA                                                                              <  SRR4302543.115404/94‑1 (MQ=60)
                  ACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAAC                                                                             <  SRR4302543.4578548/94‑1 (MQ=60)
                  ACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAAC                                                                             <  SRR4302543.7918514/94‑1 (MQ=60)
                  ACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAAC                                                                             <  SRR4302543.2350367/94‑1 (MQ=60)
                  ACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAAC                                                                             <  SRR4302543.4546973/94‑1 (MQ=60)
                  ACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAAC                                                                             <  SRR4302543.3430397/94‑1 (MQ=60)
                   CAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACA                                                                            >  SRR4302543.1956883/1‑94 (MQ=60)
                   CAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACA                                                                            <  SRR4302543.5299754/94‑1 (MQ=60)
                   CAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACA                                                                            >  SRR4302543.6586617/1‑94 (MQ=60)
                   CAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACA                                                                            >  SRR4302543.3911391/1‑94 (MQ=60)
                   CAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACA                                                                            >  SRR4302543.3946355/1‑94 (MQ=60)
                   CAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACA                                                                            >  SRR4302543.2960082/1‑94 (MQ=60)
                    AACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAG                                                                           >  SRR4302543.4343320/1‑94 (MQ=60)
                    AACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAG                                                                           <  SRR4302543.2790046/94‑1 (MQ=60)
                    AACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAG                                                                           <  SRR4302543.4999495/94‑1 (MQ=60)
                    AACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAG                                                                           <  SRR4302543.3851515/94‑1 (MQ=60)
                    AACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAG                                                                           <  SRR4302543.1171508/94‑1 (MQ=60)
                    AACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAG                                                                           <  SRR4302543.6609134/94‑1 (MQ=60)
                     ACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGG                                                                          <  SRR4302543.1751159/94‑1 (MQ=60)
                      CGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGA                                                                         <  SRR4302543.7502663/94‑1 (MQ=60)
                       GAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGAA                                                                        >  SRR4302543.2135422/1‑94 (MQ=60)
                        AGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATG                                                                       >  SRR4302543.5872465/1‑94 (MQ=60)
                          CTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAA                                                                     >  SRR4302543.2363937/1‑94 (MQ=60)
                          CTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAA                                                                     >  SRR4302543.4148083/1‑94 (MQ=60)
                          CTGACTTACCAACTAATATAAAAGATATTCAAAGACTGTATCAAAAACTGACGAAGGTATATATTGCACACAGTGAAAATAAAAACAGGATGCA                                                                     >  SRR4302543.4148084/1‑94 (MQ=60)
                           TGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAA                                                                    <  SRR4302543.7519910/94‑1 (MQ=60)
                           TGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAA                                                                    >  SRR4302543.5327711/1‑94 (MQ=60)
                           TGACTTACCAAATAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAA                                                                    <  SRR4302543.2133708/94‑1 (MQ=60)
                            GACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAG                                                                   <  SRR4302543.3726351/94‑1 (MQ=60)
                            GACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAG                                                                   >  SRR4302543.5054319/1‑94 (MQ=60)
                             ACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGT                                                                  <  SRR4302543.5955178/94‑1 (MQ=60)
                             ACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGT                                                                  <  SRR4302543.5955179/94‑1 (MQ=60)
                              CTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTC                                                                 >  SRR4302543.5249096/1‑94 (MQ=60)
                              CTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTC                                                                 >  SRR4302543.971347/1‑94 (MQ=60)
                              CTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTC                                                                 >  SRR4302543.4676709/1‑94 (MQ=60)
                               TTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCT                                                                <  SRR4302543.556107/94‑1 (MQ=60)
                               TTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCT                                                                <  SRR4302543.1921304/94‑1 (MQ=60)
                                 ACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTT                                                              <  SRR4302543.5306001/94‑1 (MQ=60)
                                  CCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAACAACAGGCTGAAAGTCTTTG                                                             >  SRR4302543.5844602/1‑94 (MQ=60)
                                  CCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTG                                                             <  SRR4302543.5869380/94‑1 (MQ=60)
                                  CCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTG                                                             <  SRR4302543.7601317/94‑1 (MQ=60)
                                  CCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTG                                                             >  SRR4302543.5844603/1‑94 (MQ=60)
                                   CAACTATTATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTGATAGATTCAACACAGTGAAAAGAAATACAGGATGAAAGTCTTTGC                                                            >  SRR4302543.7063450/1‑94 (MQ=60)
                                    AACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCC                                                           >  SRR4302543.2298227/1‑94 (MQ=60)
                                     ACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCG                                                          <  SRR4302543.3863543/94‑1 (MQ=60)
                                     ACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCG                                                          >  SRR4302543.1133178/1‑94 (MQ=60)
                                      CTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGG                                                         >  SRR4302543.5414581/1‑94 (MQ=60)
                                      CTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGG                                                         >  SRR4302543.3322938/1‑94 (MQ=60)
                                      CTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGG                                                         >  SRR4302543.6738455/1‑94 (MQ=60)
                                      CTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGG                                                         >  SRR4302543.346033/1‑94 (MQ=60)
                                        AATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAA                                                       <  SRR4302543.1167275/94‑1 (MQ=60)
                                         ATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGCAC                                                      >  SRR4302543.4308922/1‑94 (MQ=60)
                                         ATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAAC                                                      >  SRR4302543.6266171/1‑94 (MQ=60)
                                         ATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAAC                                                      >  SRR4302543.6214323/1‑94 (MQ=60)
                                         ATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAAC                                                      <  SRR4302543.7484098/94‑1 (MQ=60)
                                         ATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAAC                                                      >  SRR4302543.805905/1‑94 (MQ=60)
                                         ATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAAC                                                      >  SRR4302543.1231603/1‑94 (MQ=60)
                                          TATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACC                                                     <  SRR4302543.4656745/94‑1 (MQ=60)
                                          TATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACC                                                     >  SRR4302543.6622724/1‑94 (MQ=60)
                                           ATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCA                                                    <  SRR4302543.5344224/94‑1 (MQ=60)
                                            TAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAA                                                   >  SRR4302543.1391793/1‑94 (MQ=60)
                                            TAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAA                                                   <  SRR4302543.4670091/94‑1 (MQ=60)
                                            TAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAA                                                   >  SRR4302543.309802/1‑94 (MQ=60)
                                             AAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAAC                                                  <  SRR4302543.3601217/94‑1 (MQ=60)
                                             AAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAAC                                                  >  SRR4302543.5335896/1‑94 (MQ=60)
                                             AAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAAC                                                  >  SRR4302543.2766550/1‑94 (MQ=60)
                                                AGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTT                                               >  SRR4302543.5551996/1‑94 (MQ=60)
                                                AGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTT                                               >  SRR4302543.5551995/1‑94 (MQ=60)
                                                AGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTT                                               >  SRR4302543.6365806/1‑94 (MQ=60)
                                                  ATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTAT                                             >  SRR4302543.4521970/1‑94 (MQ=60)
                                                  ATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTAT                                             <  SRR4302543.2688722/94‑1 (MQ=60)
                                                  ATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTAT                                             >  SRR4302543.132966/1‑94 (MQ=60)
                                                  ATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTAT                                             <  SRR4302543.7057586/94‑1 (MQ=60)
                                                   TATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATT                                            >  SRR4302543.2318286/1‑94 (MQ=60)
                                                   TATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATT                                            <  SRR4302543.5730344/94‑1 (MQ=60)
                                                   TATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATT                                            <  SRR4302543.2932947/94‑1 (MQ=60)
                                                    ATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTG                                           <  SRR4302543.5347049/94‑1 (MQ=60)
                                                    ATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTG                                           >  SRR4302543.7185845/1‑94 (MQ=60)
                                                    ATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTG                                           >  SRR4302543.7671972/1‑94 (MQ=60)
                                                     TTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGA                                          >  SRR4302543.6550903/1‑94 (MQ=60)
                                                     TTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGA                                          >  SRR4302543.5175020/1‑94 (MQ=60)
                                                     TTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGA                                          <  SRR4302543.3384815/94‑1 (MQ=60)
                                                      TCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGAT                                         >  SRR4302543.5582560/1‑94 (MQ=60)
                                                       CAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATT                                        >  SRR4302543.341748/1‑94 (MQ=60)
                                                       CAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATT                                        <  SRR4302543.7885950/94‑1 (MQ=60)
                                                       CAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATT                                        >  SRR4302543.2478769/1‑94 (MQ=60)
                                                        AAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTT                                       <  SRR4302543.1226125/94‑1 (MQ=60)
                                                        AAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTT                                       >  SRR4302543.200345/1‑94 (MQ=60)
                                                         AAGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTC                                      <  SRR4302543.1627000/94‑1 (MQ=60)
                                                          AGCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCA                                     <  SRR4302543.4024394/94‑1 (MQ=60)
                                                          AGCCTGTATAAAAAAATGAAGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCA                                     <  SRR4302543.2330754/94‑1 (MQ=60)
                                                           GCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAA                                    >  SRR4302543.4269063/1‑94 (MQ=60)
                                                           GCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAA                                    >  SRR4302543.1592120/1‑94 (MQ=60)
                                                           GCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAA                                    >  SRR4302543.7491712/1‑94 (MQ=60)
                                                           GCCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAA                                    >  SRR4302543.7491713/1‑94 (MQ=60)
                                                            CCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAAT                                   >  SRR4302543.7033608/1‑94 (MQ=60)
                                                            CCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAAT                                   <  SRR4302543.2948048/94‑1 (MQ=60)
                                                            CCTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAAT                                   >  SRR4302543.7172187/1‑94 (MQ=60)
                                                             CTGTATCAAAAAATGACGAAGTTATATATTGAGCACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATA                                  >  SRR4302543.7920592/1‑94 (MQ=60)
                                                             CTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATA                                  >  SRR4302543.1945085/1‑94 (MQ=60)
                                                             CTGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATA                                  >  SRR4302543.6877149/1‑94 (MQ=60)
                                                              TGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGACCCAACTTTATTGATTTCAATAT                                 <  SRR4302543.4234734/94‑1 (MQ=60)
                                                              TGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATAT                                 <  SRR4302543.6161598/94‑1 (MQ=60)
                                                              TGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATAT                                 <  SRR4302543.1923736/94‑1 (MQ=60)
                                                              TGTATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATAT                                 <  SRR4302543.6548957/94‑1 (MQ=60)
                                                                 ATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGAC                              <  SRR4302543.4952683/94‑1 (MQ=60)
                                                                 ATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGAC                              <  SRR4302543.7141277/94‑1 (MQ=60)
                                                                 ATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGAC                              >  SRR4302543.7197005/1‑94 (MQ=60)
                                                                 ATCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGAC                              <  SRR4302543.4461405/94‑1 (MQ=60)
                                                                  TCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACA                             <  SRR4302543.1302826/94‑1 (MQ=60)
                                                                  TCAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACA                             <  SRR4302543.3537215/94‑1 (MQ=60)
                                                                   CAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAG                            >  SRR4302543.7236344/1‑94 (MQ=60)
                                                                   CAAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAG                            >  SRR4302543.4500919/1‑94 (MQ=60)
                                                                    AAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGG                           <  SRR4302543.2756356/94‑1 (MQ=60)
                                                                    AAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGG                           <  SRR4302543.2550376/94‑1 (MQ=60)
                                                                    AAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGG                           <  SRR4302543.5558164/94‑1 (MQ=60)
                                                                    AAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGG                           >  SRR4302543.5979017/1‑94 (MQ=60)
                                                                    AAAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGA                           >  SRR4302543.7526557/1‑94 (MQ=60)
                                                                     AAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGA                          >  SRR4302543.2069413/1‑94 (MQ=60)
                                                                     AAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGA                          >  SRR4302543.6332542/1‑94 (MQ=60)
                                                                     AAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGA                          >  SRR4302543.5134329/1‑94 (MQ=60)
                                                                     AAAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGA                          >  SRR4302543.5724161/1‑94 (MQ=60)
                                                                      AAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTTAATATtaaaaaaa                         >  SRR4302543.5481638/1‑86 (MQ=60)
                                                                      AAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGAC                         >  SRR4302543.3787193/1‑94 (MQ=60)
                                                                      AAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGAC                         <  SRR4302543.1663417/94‑1 (MQ=60)
                                                                      AAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGAC                         >  SRR4302543.1183947/1‑94 (MQ=60)
                                                                      AAAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGAC                         <  SRR4302543.5605404/94‑1 (MQ=60)
                                                                       AAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACG                        >  SRR4302543.3627282/1‑94 (MQ=60)
                                                                       AAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACA                        <  SRR4302543.4108050/94‑1 (MQ=60)
                                                                       AAATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACA                        <  SRR4302543.267463/94‑1 (MQ=60)
                                                                        AATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAG                       <  SRR4302543.6651453/94‑1 (MQ=60)
                                                                        AATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAG                       <  SRR4302543.5615368/94‑1 (MQ=60)
                                                                         ATGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGA                      >  SRR4302543.3713618/1‑94 (MQ=60)
                                                                          TGACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAA                     <  SRR4302543.3280545/94‑1 (MQ=60)
                                                                           GACGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAAC                    <  SRR4302543.1594260/94‑1 (MQ=60)
                                                                             CGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCT                  >  SRR4302543.5102087/1‑94 (MQ=60)
                                                                             CGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCT                  <  SRR4302543.332700/94‑1 (MQ=60)
                                                                             CGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCT                  <  SRR4302543.512068/94‑1 (MQ=60)
                                                                             CGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCT                  <  SRR4302543.3001320/94‑1 (MQ=60)
                                                                             CGAAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCT                  >  SRR4302543.5144862/1‑94 (MQ=60)
                                                                               AAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGT                <  SRR4302543.656371/94‑1 (MQ=60)
                                                                               AAGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGT                <  SRR4302543.7155503/94‑1 (MQ=60)
                                                                                AGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTC               <  SRR4302543.3289086/94‑1 (MQ=60)
                                                                                AGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTC               <  SRR4302543.7496929/94‑1 (MQ=60)
                                                                                AGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTC               <  SRR4302543.4879620/94‑1 (MQ=60)
                                                                                AGTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTC               >  SRR4302543.6347986/1‑94 (MQ=60)
                                                                                 GTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCC              <  SRR4302543.5084197/94‑1 (MQ=60)
                                                                                 GTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCC              >  SRR4302543.3586055/1‑94 (MQ=60)
                                                                                 GTTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCC              >  SRR4302543.5795465/1‑94 (MQ=60)
                                                                                  TTATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCG             <  SRR4302543.6394975/94‑1 (MQ=60)
                                                                                   TATATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGG            <  SRR4302543.1189541/94‑1 (MQ=60)
                                                                                   TAGATATTGAATACAGTGAATATAAAAACAGGAAGAAAGTCTTTGCCGTAACCAACTTTATTGATCTCAATATGTCAGGACAGAACCTGTCCGG            >  SRR4302543.7083052/1‑94 (MQ=60)
                                                                                      ATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTT         <  SRR4302543.2774370/94‑1 (MQ=60)
                                                                                      ATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTT         >  SRR4302543.3606773/1‑94 (MQ=60)
                                                                                      ATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTT         <  SRR4302543.1352259/94‑1 (MQ=60)
                                                                                      ATATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTT         <  SRR4302543.1352260/94‑1 (MQ=60)
                                                                                        ATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCG       >  SRR4302543.1324234/1‑94 (MQ=60)
                                                                                        ATTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCG       >  SRR4302543.149175/1‑94 (MQ=60)
                                                                                         TTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCGT      <  SRR4302543.800849/94‑1 (MQ=60)
                                                                                         TTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCGT      >  SRR4302543.2929533/1‑94 (MQ=60)
                                                                                         TTGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGGTCGT      >  SRR4302543.302567/1‑94 (MQ=60)
                                                                                          TGAACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCGTT     >  SRR4302543.280013/1‑94 (MQ=60)
                                                                                            AACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCGTTCT   <  SRR4302543.4709631/94‑1 (MQ=60)
                                                                                            AACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCGTTCT   >  SRR4302543.8000689/1‑94 (MQ=60)
                                                                                            AACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCGTTCT   <  SRR4302543.6640862/94‑1 (MQ=60)
                                                                                            AACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCGTTCT   <  SRR4302543.6640861/94‑1 (MQ=60)
                                                                                             ACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCGTTCTA  >  SRR4302543.2544010/1‑94 (MQ=60)
                                                                                             ACACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCGTTCTA  <  SRR4302543.146023/94‑1 (MQ=60)
                                                                                             |                                                                                             
TACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAGCACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCGTTCTA  >  NC_000913/3649418‑3649604

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑