Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,678,204	G→A	P456L (CCG→CTG)	yhjJ ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,678,204	0	G	A	100.0%	1809.0 / NA	489	P456L (CCG→CTG)	yhjJ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (222/267); total (222/267)

Only 100 of 498 total aligned reads displayed.

TCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTA  >  NC_000913/3678114‑3678293

tCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGc                                                                                         <  2:4231425/93‑1 (MQ=255)

tCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGc                                                                                         >  1:2434586/1‑93 (MQ=255)

tCATCCGTGGCGACAGAGGTGGGCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGc                                                                                         <  1:2656781/93‑1 (MQ=255)

  aTCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTc                                                                                       >  2:3963944/1‑93 (MQ=255)

   tCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCg                                                                                      >  1:4091194/1‑93 (MQ=255)

   tCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCg                                                                                      >  2:4328378/1‑93 (MQ=255)

    ccGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGc                                                                                     <  2:320305/93‑1 (MQ=255)

      gTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCt                                                                                   <  1:5966677/93‑1 (MQ=255)

      gTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCt                                                                                   <  1:3286485/93‑1 (MQ=255)

      gTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCt                                                                                   <  1:6959897/93‑1 (MQ=255)

        ggCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCttt                                                                                 <  1:4268869/93‑1 (MQ=255)

        ggCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCttt                                                                                 <  2:5188498/93‑1 (MQ=255)

            aCAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGc                                                                             <  1:5175101/93‑1 (MQ=255)

            aCAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGc                                                                             <  2:2959195/93‑1 (MQ=255)

            aCAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGc                                                                             >  2:6494704/1‑93 (MQ=255)

             cAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCt                                                                            >  2:6624892/1‑93 (MQ=255)

                 ggtggtCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTgcag                                                                        >  2:1053718/1‑93 (MQ=255)

                 ggtggtCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTgcag                                                                        >  1:6182503/1‑93 (MQ=255)

                   tggtCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTgcagca                                                                      >  2:1116502/1‑93 (MQ=255)

                   gggtCGCAGCGGCGGTGGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTgcagca                                                                      <  2:2811701/92‑1 (MQ=255)

                     gtCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGt                                                                    >  1:1254151/1‑93 (MQ=255)

                      tCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTa                                                                   <  1:6397509/93‑1 (MQ=255)

                        gCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTAtt                                                                 <  1:6318685/93‑1 (MQ=255)

                        gCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTAtt                                                                 >  1:4851056/1‑93 (MQ=255)

                        gCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTAtt                                                                 <  2:2122665/93‑1 (MQ=255)

                         cAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTa                                                                <  1:7124102/93‑1 (MQ=255)

                          aGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTaa                                                               <  2:4867760/93‑1 (MQ=255)

                              gcggTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGcc                                                           >  1:7393477/1‑93 (MQ=255)

                              gcggTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGcc                                                           >  1:2340149/1‑93 (MQ=255)

                              gcggTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGcc                                                           >  1:5840277/1‑93 (MQ=255)

                              gcggTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGcc                                                           >  2:2007722/1‑93 (MQ=255)

                                ggTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCat                                                         >  1:1063968/1‑93 (MQ=255)

                                    gATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCa                                                     >  1:3402375/1‑93 (MQ=255)

                                    gATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCa                                                     <  2:5377899/93‑1 (MQ=255)

                                    gATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCa                                                     >  2:4103661/1‑93 (MQ=255)

                                     aTGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCAt                                                    <  1:3866520/93‑1 (MQ=255)

                                      tGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCAtt                                                   <  2:7155717/93‑1 (MQ=255)

                                       ggggCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTc                                                  <  1:2743575/93‑1 (MQ=255)

                                        gggCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCg                                                 >  2:2407725/1‑93 (MQ=255)

                                         ggCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGa                                                >  1:4966261/1‑93 (MQ=255)

                                          gCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGAc                                               <  1:572328/93‑1 (MQ=255)

                                          gCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGAc                                               <  1:3636977/93‑1 (MQ=255)

                                           ccATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACa                                              >  1:3792307/1‑93 (MQ=255)

                                            cATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACaa                                             <  2:3529126/93‑1 (MQ=255)

                                               gATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTg                                          >  2:930738/1‑93 (MQ=255)

                                                 tttGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGtt                                        >  1:3165195/1‑93 (MQ=255)

                                                   tggtCCCATACCGGCTTTAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGa                                      <  1:1814587/90‑1 (MQ=255)

                                                   tGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGa                                      <  1:5107146/93‑1 (MQ=255)

                                                   tGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGa                                      <  1:5471425/93‑1 (MQ=255)

                                                   tGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGa                                      <  1:848749/93‑1 (MQ=255)

                                                       cccAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCa                                  <  2:7910155/93‑1 (MQ=255)

                                                         cAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGa                                <  2:6780124/93‑1 (MQ=255)

                                                          aGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGAt                               >  1:7585049/1‑93 (MQ=255)

                                                          aGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGAt                               <  2:3767403/93‑1 (MQ=255)

                                                           gACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATc                              >  2:2723634/1‑93 (MQ=255)

                                                           gACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATc                              >  2:6855107/1‑93 (MQ=255)

                                                            aCCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATcc                             <  1:3560564/93‑1 (MQ=255)

                                                            aCCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATcc                             <  2:146937/93‑1 (MQ=255)

                                                             ccGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCt                            <  1:7911701/93‑1 (MQ=255)

                                                               gCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGa                          >  2:5999887/1‑93 (MQ=255)

                                                               gCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGa                          >  2:5093082/1‑93 (MQ=255)

                                                               gCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGa                          >  1:3066893/1‑93 (MQ=255)

                                                               gCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGa                          <  1:6205226/93‑1 (MQ=255)

                                                                 cTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGAtt                        >  2:7682804/1‑93 (MQ=255)

                                                                 cTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGAtt                        <  1:2820242/93‑1 (MQ=255)

                                                                  tGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGAttt                       >  1:1575921/1‑93 (MQ=255)

                                                                  tGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGAttt                       <  2:6355873/93‑1 (MQ=255)

                                                                  tGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGAttt                       <  1:5339483/93‑1 (MQ=255)

                                                                   gCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTa                      >  1:1159405/1‑93 (MQ=255)

                                                                    cAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTaa                     <  2:6165351/93‑1 (MQ=255)

                                                                     aaCGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAAc                    <  2:3724245/93‑1 (MQ=255)

                                                                      aCGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACa                   <  2:3878102/93‑1 (MQ=255)

                                                                        gCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAtc                 >  2:1777739/1‑93 (MQ=255)

                                                                        gCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAtc                 >  1:201025/1‑93 (MQ=255)

                                                                        gCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAtc                 <  2:623872/93‑1 (MQ=255)

                                                                         cTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAtct                >  1:145311/1‑93 (MQ=255)

                                                                         cTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAtct                <  1:2100466/93‑1 (MQ=255)

                                                                         cTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAtct                >  1:7261911/1‑93 (MQ=255)

                                                                         cTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAtct                >  2:2625966/1‑93 (MQ=255)

                                                                          tttCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAtctc               <  1:6435753/93‑1 (MQ=255)

                                                                          tttCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAtctc               <  2:5690472/93‑1 (MQ=255)

                                                                           ttCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATctct              >  1:4492311/1‑93 (MQ=255)

                                                                             cgtGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTAc            <  1:6150368/91‑1 (MQ=255)

                                                                             cATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTAc            >  2:4654956/1‑93 (MQ=255)

                                                                             cATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTAc            <  2:5912104/93‑1 (MQ=255)

                                                                               tGTTATATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCg          >  2:3039811/1‑93 (MQ=255)

                                                                                 ttAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTc        >  1:2598622/1‑93 (MQ=255)

                                                                                  tAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCa       <  2:7387687/93‑1 (MQ=255)

                                                                                  tAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCa       >  2:7748227/1‑93 (MQ=255)

                                                                                  tAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCa       <  2:4450370/93‑1 (MQ=255)

                                                                                   aaaTGCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCGCTACCGTCAg      <  2:1869819/93‑1 (MQ=255)

                                                                                    aaTTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAgc     >  1:1389101/1‑92 (MQ=255)

                                                                                     aTTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGc    <  1:920395/93‑1 (MQ=255)

                                                                                     aTTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGc    <  1:1703864/93‑1 (MQ=255)

                                                                                     aTTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGc    >  2:2213220/1‑93 (MQ=255)

                                                                                      ttCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCt   >  1:7825684/1‑93 (MQ=255)

                                                                                      ttCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCt   >  1:4668500/1‑93 (MQ=255)

                                                                                       tCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTa  <  2:1660799/93‑1 (MQ=255)

                                                                                       tCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTa  >  2:133881/1‑93 (MQ=255)

                                                                                       tCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTa  <  1:6627561/93‑1 (MQ=255)

TCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTA  >  NC_000913/3678114‑3678293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 284 total aligned reads displayed.

ACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAA  >  NC_000913/3678111‑3678297

ACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCA                                                                                               <  SRR4302543.3209436/94‑1 (MQ=60)

 CGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAG                                                                                              <  SRR4302543.4084459/94‑1 (MQ=60)

 CGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAG                                                                                              <  SRR4302543.6709958/94‑1 (MQ=60)

 CGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAG                                                                                              <  SRR4302543.7824319/94‑1 (MQ=60)

 CGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAG                                                                                              <  SRR4302543.7643840/94‑1 (MQ=60)

 CGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAG                                                                                              >  SRR4302543.7222532/1‑94 (MQ=60)

  GTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGC                                                                                             >  SRR4302543.769999/1‑94 (MQ=60)

  GTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGC                                                                                             <  SRR4302543.1959391/94‑1 (MQ=60)

  GTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGC                                                                                             >  SRR4302543.430926/1‑94 (MQ=60)

  GTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGC                                                                                             >  SRR4302543.7233221/1‑94 (MQ=60)

  GTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGC                                                                                             >  SRR4302543.2456553/1‑94 (MQ=60)

  GTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGC                                                                                             >  SRR4302543.2092670/1‑94 (MQ=60)

   TCATCCGTGGCGACAGAGGTGGGCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCT                                                                                            <  SRR4302543.2680866/94‑1 (MQ=60)

    CATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTC                                                                                           <  SRR4302543.7666281/94‑1 (MQ=60)

     ATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCG                                                                                          >  SRR4302543.4127887/1‑94 (MQ=60)

     ATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCG                                                                                          >  SRR4302543.824144/1‑94 (MQ=60)

     ATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCG                                                                                          >  SRR4302543.1517062/1‑94 (MQ=60)

     ATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCG                                                                                          >  SRR4302543.3324782/1‑94 (MQ=60)

     ATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCG                                                                                          <  SRR4302543.2771593/94‑1 (MQ=60)

     ATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCG                                                                                          >  SRR4302543.3892085/1‑94 (MQ=60)

        CGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCT                                                                                       <  SRR4302543.4952834/94‑1 (MQ=60)

         GTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTT                                                                                      <  SRR4302543.6021307/94‑1 (MQ=60)

         GTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTT                                                                                      <  SRR4302543.1701193/94‑1 (MQ=60)

         GTGGCGACAGAGGTGGGCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTT                                                                                      <  SRR4302543.3316146/94‑1 (MQ=60)

           GGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTC                                                                                    <  SRR4302543.6235460/94‑1 (MQ=60)

             CGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGG                                                                                  >  SRR4302543.2750831/1‑94 (MQ=60)

             CGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGG                                                                                  <  SRR4302543.4274778/94‑1 (MQ=60)

               ACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCT                                                                                <  SRR4302543.1263495/94‑1 (MQ=60)

               ACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCT                                                                                <  SRR4302543.5221827/94‑1 (MQ=60)

               ACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCT                                                                                <  SRR4302543.6245532/94‑1 (MQ=60)

               ACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCT                                                                                >  SRR4302543.7466518/1‑94 (MQ=60)

               ACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCT                                                                                <  SRR4302543.5496767/94‑1 (MQ=60)

                CAGAGGTGGTCGCAGCGCCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTG                                                                               <  SRR4302543.4851410/94‑1 (MQ=60)

                 AGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGC                                                                              >  SRR4302543.925423/1‑94 (MQ=60)

                 AGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGC                                                                              >  SRR4302543.7984474/1‑94 (MQ=60)

                 AGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGC                                                                              >  SRR4302543.3530667/1‑94 (MQ=60)

                 AGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGC                                                                              >  SRR4302543.5329900/1‑94 (MQ=60)

                  GAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGACTGCA                                                                             >  SRR4302543.6485395/1‑94 (MQ=60)

                   AGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAG                                                                            <  SRR4302543.3928016/94‑1 (MQ=60)

                   AGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAG                                                                            >  SRR4302543.6240934/1‑94 (MQ=60)

                   AGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAG                                                                            <  SRR4302543.3650156/94‑1 (MQ=60)

                    GGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGC                                                                           <  SRR4302543.149164/94‑1 (MQ=60)

                     GTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCA                                                                          <  SRR4302543.4029787/94‑1 (MQ=60)

                      TGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAG                                                                         <  SRR4302543.3502346/94‑1 (MQ=60)

                      TGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAG                                                                         >  SRR4302543.323243/1‑94 (MQ=60)

                       GGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGT                                                                        <  SRR4302543.282716/94‑1 (MQ=60)

                       GGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGT                                                                        >  SRR4302543.4906919/1‑94 (MQ=60)

                       GGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGT                                                                        >  SRR4302543.1265390/1‑94 (MQ=60)

                       GGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGT                                                                        >  SRR4302543.1265389/1‑94 (MQ=60)

                       GGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGT                                                                        >  SRR4302543.4906920/1‑94 (MQ=60)

                         TCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTAT                                                                      <  SRR4302543.6457732/94‑1 (MQ=60)

                          CGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATT                                                                     >  SRR4302543.3138741/1‑94 (MQ=60)

                          CGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATT                                                                     <  SRR4302543.7299408/94‑1 (MQ=60)

                          CGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATT                                                                     <  SRR4302543.1245745/94‑1 (MQ=60)

                           GCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTA                                                                    <  SRR4302543.6378109/94‑1 (MQ=60)

                           GCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTA                                                                    <  SRR4302543.1575276/94‑1 (MQ=60)

                            CAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAA                                                                   <  SRR4302543.7193313/94‑1 (MQ=60)

                            CAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAA                                                                   <  SRR4302543.6018799/94‑1 (MQ=60)

                             AGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAAC                                                                  >  SRR4302543.3381499/1‑94 (MQ=60)

                             AGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAAC                                                                  >  SRR4302543.4721287/1‑94 (MQ=60)

                             AGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAAC                                                                  <  SRR4302543.7594575/94‑1 (MQ=60)

                             AGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAAC                                                                  <  SRR4302543.2309478/94‑1 (MQ=60)

                             AGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAAC                                                                  <  SRR4302543.912424/94‑1 (MQ=60)

                             AGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAAC                                                                  >  SRR4302543.7129730/1‑94 (MQ=60)

                             AGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCAAGCTCGCCTTTCGGATGCAGCTGTATTTAC                                                                  >  SRR4302543.5617137/1‑94 (MQ=60)

                                GGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCC                                                               <  SRR4302543.192373/94‑1 (MQ=60)

                                GGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCC                                                               >  SRR4302543.5893405/1‑94 (MQ=60)

                                GGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCC                                                               >  SRR4302543.2361377/1‑94 (MQ=60)

                                GGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCC                                                               >  SRR4302543.7464488/1‑94 (MQ=60)

                                  CGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCAT                                                             >  SRR4302543.1073526/1‑94 (MQ=60)

                                  CGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCAT                                                             <  SRR4302543.615482/94‑1 (MQ=60)

                                   GGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATA                                                            >  SRR4302543.6749966/1‑94 (MQ=60)

                                   GGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATA                                                            >  SRR4302543.6528387/1‑94 (MQ=60)

                                   GGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATA                                                            <  SRR4302543.2877703/94‑1 (MQ=60)

                                    GTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATAT                                                           >  SRR4302543.6923815/1‑94 (MQ=60)

                                    GTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATAT                                                           <  SRR4302543.3518142/94‑1 (MQ=60)

                                    GTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATAT                                                           <  SRR4302543.6249507/94‑1 (MQ=60)

                                      AGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCA                                                         <  SRR4302543.6020100/94‑1 (MQ=60)

                                      AGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCA                                                         >  SRR4302543.3432852/1‑94 (MQ=60)

                                      AGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCA                                                         <  SRR4302543.5465984/94‑1 (MQ=60)

                                       GATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCAT                                                        <  SRR4302543.5821361/94‑1 (MQ=60)

                                       GATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCAT                                                        <  SRR4302543.5221216/94‑1 (MQ=60)

                                        ATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATT                                                       >  SRR4302543.5796760/1‑94 (MQ=60)

                                        ATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATT                                                       <  SRR4302543.3900674/94‑1 (MQ=60)

                                        ATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATT                                                       >  SRR4302543.1078891/1‑94 (MQ=60)

                                         TGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTC                                                      <  SRR4302543.3078838/94‑1 (MQ=60)

                                         TGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTC                                                      >  SRR4302543.636084/1‑94 (MQ=60)

                                          GGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCG                                                     <  SRR4302543.2768521/94‑1 (MQ=60)

                                          GGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCG                                                     <  SRR4302543.5145190/94‑1 (MQ=60)

                                          GGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCG                                                     <  SRR4302543.3622730/94‑1 (MQ=60)

                                           GGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGA                                                    >  SRR4302543.5011467/1‑94 (MQ=60)

                                             GCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA                                                  >  SRR4302543.3361317/1‑94 (MQ=60)

                                             GCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA                                                  <  SRR4302543.3309537/94‑1 (MQ=60)

                                             GCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA                                                  >  SRR4302543.3825717/1‑94 (MQ=60)

                                             GCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA                                                  <  SRR4302543.3668986/94‑1 (MQ=60)

                                                ATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACT                                               >  SRR4302543.1458912/1‑94 (MQ=60)

                                                ATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACT                                               <  SRR4302543.5806904/94‑1 (MQ=60)

                                                ATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACT                                               >  SRR4302543.4726747/1‑94 (MQ=60)

                                                 TGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTG                                              <  SRR4302543.4418710/94‑1 (MQ=60)

                                                  GATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGT                                             <  SRR4302543.1729331/94‑1 (MQ=60)

                                                  GATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGT                                             >  SRR4302543.6464540/1‑94 (MQ=60)

                                                  GATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGCATTAACGCCATATCATTCAAAAACTGT                                             >  SRR4302543.6464541/1‑94 (MQ=60)

                                                   ATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT                                            >  SRR4302543.5746296/1‑94 (MQ=60)

                                                   ATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT                                            <  SRR4302543.1692415/94‑1 (MQ=60)

                                                   ATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT                                            >  SRR4302543.3193691/1‑94 (MQ=60)

                                                   ATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT                                            <  SRR4302543.7335572/94‑1 (MQ=60)

                                                    TTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTG                                           <  SRR4302543.1846743/94‑1 (MQ=60)

                                                    ATTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTG                                           <  SRR4302543.5898313/94‑1 (MQ=60)

                                                      tggtcccataccggctttAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGAC                                         <  SRR4302543.1830865/76‑1 (MQ=60)

                                                      TGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGAC                                         >  SRR4302543.4266341/1‑94 (MQ=60)

                                                      TGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGAC                                         <  SRR4302543.5153362/94‑1 (MQ=60)

                                                      TGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGAC                                         <  SRR4302543.6229418/94‑1 (MQ=60)

                                                      TGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCCCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGAC                                         <  SRR4302543.7966676/94‑1 (MQ=60)

                                                        ATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGC                                       >  SRR4302543.2371567/1‑94 (MQ=60)

                                                         TCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCA                                      <  SRR4302543.2049136/94‑1 (MQ=60)

                                                         TCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCA                                      >  SRR4302543.7056972/1‑94 (MQ=60)

                                                          CCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAG                                     >  SRR4302543.1624631/1‑94 (MQ=60)

                                                          CCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAG                                     >  SRR4302543.6384819/1‑94 (MQ=60)

                                                          CCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAG                                     >  SRR4302543.6384818/1‑94 (MQ=60)

                                                          CCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAG                                     <  SRR4302543.1438139/94‑1 (MQ=60)

                                                          CCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAG                                     <  SRR4302543.463125/94‑1 (MQ=60)

                                                           CCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGA                                    >  SRR4302543.547830/1‑94 (MQ=60)

                                                            CAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGAT                                   >  SRR4302543.2116533/1‑94 (MQ=60)

                                                             AGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATC                                  >  SRR4302543.5170887/1‑94 (MQ=60)

                                                             AGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATC                                  >  SRR4302543.2956950/1‑94 (MQ=60)

                                                               ACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCT                                >  SRR4302543.833813/1‑94 (MQ=60)

                                                                CCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTG                               <  SRR4302543.7986032/94‑1 (MQ=60)

                                                                  GCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGAT                             <  SRR4302543.6263820/94‑1 (MQ=60)

                                                                   CCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATT                            <  SRR4302543.2252013/94‑1 (MQ=60)

                                                                    CTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACACCTGTTGACGCAGATCCTGATTT                           >  SRR4302543.4624481/1‑94 (MQ=60)

                                                                    CTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTT                           >  SRR4302543.5536899/1‑94 (MQ=60)

                                                                    CTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTT                           >  SRR4302543.7867624/1‑94 (MQ=60)

                                                                    CTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTT                           >  SRR4302543.1589984/1‑94 (MQ=60)

                                                                    CTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTT                           <  SRR4302543.7597979/94‑1 (MQ=60)

                                                                    CTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTT                           <  SRR4302543.2642232/94‑1 (MQ=60)

                                                                    CTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTT                           >  SRR4302543.4057704/1‑94 (MQ=60)

                                                                     TGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTA                          >  SRR4302543.6921804/1‑94 (MQ=60)

                                                                     TGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTA                          >  SRR4302543.1169963/1‑94 (MQ=60)

                                                                     TGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTA                          <  SRR4302543.5387780/94‑1 (MQ=60)

                                                                        AACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACA                       >  SRR4302543.2412235/1‑94 (MQ=60)

                                                                        AACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACA                       >  SRR4302543.2488303/1‑94 (MQ=60)

                                                                         ACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAT                      <  SRR4302543.6288835/94‑1 (MQ=60)

                                                                          CGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATC                     >  SRR4302543.202718/1‑94 (MQ=60)

                                                                           GCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACGACTGTTGACGCAGATCCTGATTTAACATCT                    <  SRR4302543.3734013/94‑1 (MQ=60)

                                                                           GCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCT                    <  SRR4302543.2657508/94‑1 (MQ=60)

                                                                           GCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCT                    >  SRR4302543.288950/1‑94 (MQ=60)

                                                                           GCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCT                    <  SRR4302543.3734009/94‑1 (MQ=60)

                                                                           GCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCT                    <  SRR4302543.3734011/94‑1 (MQ=60)

                                                                           GCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCT                    >  SRR4302543.3868029/1‑94 (MQ=60)

                                                                           GCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCT                    >  SRR4302543.7332081/1‑94 (MQ=60)

                                                                            CTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTC                   <  SRR4302543.2119257/94‑1 (MQ=60)

                                                                            CTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTC                   >  SRR4302543.2643824/1‑94 (MQ=60)

                                                                             TTTTATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCT                  <  SRR4302543.1292402/94‑1 (MQ=60)

                                                                             TTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCT                  >  SRR4302543.4533132/1‑94 (MQ=60)

                                                                             TTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCT                  >  SRR4302543.4533133/1‑94 (MQ=60)

                                                                             TTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCT                  >  SRR4302543.3109978/1‑94 (MQ=60)

                                                                             TTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCT                  >  SRR4302543.884461/1‑94 (MQ=60)

                                                                             TTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCT                  <  SRR4302543.6496393/94‑1 (MQ=60)

                                                                             TTTCATGTTAAATTCCAGCTCGCCTGTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCT                  <  SRR4302543.5214981/94‑1 (MQ=60)

                                                                              TTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTA                 >  SRR4302543.258038/1‑94 (MQ=60)

                                                                              TTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTA                 >  SRR4302543.7124156/1‑94 (MQ=60)

                                                                              TTCATGTTAAATTCCAGCTCGCCTCTCGGCTGAAGCAGCATTACCGCCATATCCTTCGGCAACTGTTGACGCAGATCCTGATTTAATATCTCTA                 >  SRR4302543.258037/1‑94 (MQ=60)

                                                                                CGTGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACC               <  SRR4302543.6208603/94‑1 (MQ=60)

                                                                                CATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACC               <  SRR4302543.2809600/94‑1 (MQ=60)

                                                                                CATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACC               <  SRR4302543.6530946/94‑1 (MQ=60)

                                                                                CATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACC               <  SRR4302543.6234939/94‑1 (MQ=60)

                                                                                CATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACC               <  SRR4302543.5056082/94‑1 (MQ=60)

                                                                                 ATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCG              >  SRR4302543.179177/1‑94 (MQ=60)

                                                                                  TGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGT             >  SRR4302543.1351461/1‑94 (MQ=60)

                                                                                  TGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGT             >  SRR4302543.4680237/1‑94 (MQ=60)

                                                                                   GTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTC            <  SRR4302543.6264269/94‑1 (MQ=60)

                                                                                   GTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTC            <  SRR4302543.6107381/94‑1 (MQ=60)

                                                                                   GTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTC            <  SRR4302543.1103047/94‑1 (MQ=60)

                                                                                   GTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTC            >  SRR4302543.2622225/1‑94 (MQ=60)

                                                                                    TTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCA           >  SRR4302543.1740063/1‑94 (MQ=60)

                                                                                      AAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGG         <  SRR4302543.3142067/94‑1 (MQ=60)

                                                                                      AAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGG         <  SRR4302543.4256677/94‑1 (MQ=60)

                                                                                      AAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGC         >  SRR4302543.1401600/1‑94 (MQ=60)

                                                                                      AAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCCACCGTCAGG         >  SRR4302543.1401601/1‑94 (MQ=60)

                                                                                       AATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGC        <  SRR4302543.23855/94‑1 (MQ=60)

                                                                                       AATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGC        >  SRR4302543.5714775/1‑94 (MQ=60)

                                                                                        ATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCT       >  SRR4302543.7899393/1‑94 (MQ=60)

                                                                                        ATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCT       <  SRR4302543.928450/94‑1 (MQ=60)

                                                                                        ATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCT       <  SRR4302543.3639016/94‑1 (MQ=60)

                                                                                        ATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCT       <  SRR4302543.5135906/94‑1 (MQ=60)

                                                                                         TTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTA      >  SRR4302543.7378275/1‑94 (MQ=60)

                                                                                          TCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTAT     >  SRR4302543.7360793/1‑94 (MQ=60)

                                                                                          TCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTAT     <  SRR4302543.2835453/94‑1 (MQ=60)

                                                                                          TCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTAT     <  SRR4302543.6690067/94‑1 (MQ=60)

                                                                                          TCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTAT     <  SRR4302543.5376939/94‑1 (MQ=60)

                                                                                           CCCGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGGTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATT    <  SRR4302543.2705114/94‑1 (MQ=60)

                                                                                           CCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATT    <  SRR4302543.7974938/94‑1 (MQ=60)

                                                                                           CCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATT    <  SRR4302543.2705113/94‑1 (MQ=60)

                                                                                           CCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATT    >  SRR4302543.4841167/1‑94 (MQ=60)

                                                                                           CCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATA    >  SRR4302543.4791804/1‑94 (MQ=60)

                                                                                            CAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGTCTATTA   >  SRR4302543.145921/1‑94 (MQ=60)

                                                                                            CAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTA   >  SRR4302543.7193063/1‑94 (MQ=60)

                                                                                            CAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTA   <  SRR4302543.5319612/94‑1 (MQ=60)

                                                                                             AGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAA  <  SRR4302543.806766/94‑1 (MQ=60)

                                                                                             AGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAA  >  SRR4302543.2538509/1‑94 (MQ=60)

ACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAA  >  NC_000913/3678111‑3678297

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`