Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,743,603 Δ1 bp coding (1171/1275 nt) yiaN → putative membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,743,6030C.100.0% 1865.5 / NA 406coding (1171/1275 nt)yiaNputative membrane protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (173/233);  total (173/233)

Only 100 of 414 total aligned reads displayed.

ATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATCGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTC  >  NC_000913/3743516‑3743690
                                                                                       |                                                                                       
aTCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCa                                                                                   <  2:6240139/93‑1 (MQ=255)
aTCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCa                                                                                   <  2:219536/93‑1 (MQ=255)
aTCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCa                                                                                   <  1:864179/93‑1 (MQ=255)
aTCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCa                                                                                   >  1:7652476/1‑93 (MQ=255)
 tCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAg                                                                                  >  2:6563085/1‑93 (MQ=255)
 tCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAg                                                                                  >  2:4280707/1‑93 (MQ=255)
     tAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCag                                                                              <  1:1064392/93‑1 (MQ=255)
     tAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCag                                                                              >  1:372454/1‑93 (MQ=255)
      aaCTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCaga                                                                             <  2:1797091/93‑1 (MQ=255)
       aCTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCagag                                                                            >  1:26681/1‑93 (MQ=255)
       aCTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCagag                                                                            <  1:3670213/93‑1 (MQ=255)
       aCTGCTCAATCGGCCTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCagag                                                                            <  1:971727/93‑1 (MQ=255)
         tGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGc                                                                          >  2:300496/1‑93 (MQ=255)
         tGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGc                                                                          <  1:4226287/93‑1 (MQ=255)
           cTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGt                                                                        >  2:6386312/1‑93 (MQ=255)
            tCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGtt                                                                       <  2:4427157/93‑1 (MQ=255)
              aaTCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGtttt                                                                     >  2:3758240/1‑93 (MQ=255)
              aaTCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGtttt                                                                     <  2:1920343/93‑1 (MQ=255)
               aTCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTc                                                                    >  1:6436045/1‑93 (MQ=255)
               aTCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTc                                                                    >  2:560462/1‑93 (MQ=255)
                tCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTcc                                                                   >  1:5148190/1‑93 (MQ=255)
                  ggCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCt                                                                 >  2:4611058/1‑93 (MQ=255)
                   gCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCtt                                                                <  1:1607184/93‑1 (MQ=255)
                   gCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCtt                                                                >  1:315605/1‑93 (MQ=255)
                   gCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCtt                                                                >  1:5662749/1‑93 (MQ=255)
                    cTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTa                                                               <  2:3941152/93‑1 (MQ=255)
                    cTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTa                                                               <  1:7176132/93‑1 (MQ=255)
                    cTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTa                                                               <  2:583402/93‑1 (MQ=255)
                    cTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTa                                                               <  2:474127/93‑1 (MQ=255)
                     ttAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTAc                                                              <  2:1086981/93‑1 (MQ=255)
                     ttAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTAc                                                              <  1:3242069/93‑1 (MQ=255)
                      tAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACg                                                             >  1:6984405/1‑93 (MQ=255)
                      tAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACg                                                             <  2:6342979/93‑1 (MQ=255)
                      tAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACg                                                             <  2:762941/93‑1 (MQ=255)
                         ttACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTcc                                                          >  1:6716292/1‑93 (MQ=255)
                          tACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCt                                                         <  2:7072561/93‑1 (MQ=255)
                          tACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCt                                                         <  1:7327577/93‑1 (MQ=255)
                           acacCGCCTATCTGTAATGTACTTAACGTTATTTCAGAGGTGTCAAAACTCAAATTCGAT‑GATGCAGTCCGAGGCGCTTTCCGTTAACTCCTg                                                        >  1:1349309/1‑93 (MQ=255)
                           acacCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTg                                                        >  2:1457117/1‑93 (MQ=255)
                           acacCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTg                                                        <  2:5703104/93‑1 (MQ=255)
                             acCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGt                                                      <  2:232807/93‑1 (MQ=255)
                             acCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGt                                                      >  1:4256981/1‑93 (MQ=255)
                              ccGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGtt                                                     >  1:3608251/1‑93 (MQ=255)
                              ccGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGtt                                                     >  2:5470196/1‑93 (MQ=255)
                               cGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGttt                                                    <  1:1140114/93‑1 (MQ=255)
                               cGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGttt                                                    >  2:2364437/1‑93 (MQ=255)
                               cGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGttt                                                    <  2:6609722/93‑1 (MQ=255)
                               cGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGttt                                                    <  1:5643236/93‑1 (MQ=255)
                                gCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGtttt                                                   <  1:4948750/93‑1 (MQ=255)
                                 ccTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTta                                                  <  2:7164282/93‑1 (MQ=255)
                                  cTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTtat                                                 >  1:7764099/1‑93 (MQ=255)
                                  cTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTtat                                                 <  1:284810/93‑1 (MQ=255)
                                  cTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTtat                                                 <  1:634290/93‑1 (MQ=255)
                                  cTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTtat                                                 >  1:3411519/1‑93 (MQ=255)
                                   tATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTtata                                                >  1:2184467/1‑93 (MQ=255)
                                   tATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTtata                                                >  2:6012273/1‑93 (MQ=255)
                                   tATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTtata                                                <  1:5901726/93‑1 (MQ=255)
                                    aTCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTatat                                               <  1:4460598/93‑1 (MQ=255)
                                    aTCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTatat                                               <  2:3147779/93‑1 (MQ=255)
                                     tCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATAtt                                              <  2:5810502/93‑1 (MQ=255)
                                     tCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATAtt                                              <  1:787323/93‑1 (MQ=255)
                                       ggTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCa                                            >  1:1452868/1‑93 (MQ=255)
                                          aaggTACTTAACGTTATTTAATGGGTGGCAAGACTCAAAGTCGAT‑GATGCAGTCAGAGGCGTTTTCCATTACGTCCTGGTTTTATATTCatta                                         <  1:7485667/90‑1 (MQ=255)
                                          aaTGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCatta                                         >  2:3588665/1‑93 (MQ=255)
                                           aTGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCattat                                        >  2:1599405/1‑93 (MQ=255)
                                            tGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCattatt                                       >  2:4561695/1‑93 (MQ=255)
                                            tGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGATTTCCCTTACGTCCTGGTTTTATATTCattatt                                       >  1:7620882/1‑93 (MQ=255)
                                                 ttAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCg                                  >  1:1754125/1‑93 (MQ=255)
                                                 ttAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCg                                  >  2:7470260/1‑93 (MQ=255)
                                                 ttAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCg                                  >  1:5260198/1‑93 (MQ=255)
                                                 ttAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCg                                  >  1:4785420/1‑93 (MQ=255)
                                                  tAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGt                                 <  2:2626790/93‑1 (MQ=255)
                                                   aaCGTTATTTCAGTGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTa                                <  2:3394092/93‑1 (MQ=255)
                                                   aaCGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTa                                <  2:1728365/93‑1 (MQ=255)
                                                   aaCGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTa                                <  1:2294422/93‑1 (MQ=255)
                                                   aaCGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTa                                >  2:6860357/1‑93 (MQ=255)
                                                     cGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAtt                              <  2:668208/93‑1 (MQ=255)
                                                     cGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAtt                              <  1:4556905/93‑1 (MQ=255)
                                                      gTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAttt                             <  2:41397/93‑1 (MQ=255)
                                                       ttATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTg                            >  1:4086895/1‑93 (MQ=255)
                                                        tATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGt                           <  2:6167487/93‑1 (MQ=255)
                                                          tttCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGttt                         <  2:2936409/93‑1 (MQ=255)
                                                           ttCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGtttt                        >  1:3056642/1‑93 (MQ=255)
                                                            tCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGttttt                       >  2:5171514/1‑93 (MQ=255)
                                                             cAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTa                      <  2:5921417/93‑1 (MQ=255)
                                                              aGGGGTGTCAAAACTCAAATTCGAT‑GATGCCGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAGTTGTTTTTAt                     <  1:6943861/93‑1 (MQ=255)
                                                              aGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTAt                     <  1:2099880/93‑1 (MQ=255)
                                                                  gTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTccc                 >  2:903219/1‑93 (MQ=255)
                                                                         aaCTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCtca          <  1:1031707/93‑1 (MQ=255)
                                                                           cTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCtcatc        <  1:1851908/93‑1 (MQ=255)
                                                                            ttaaaTTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCtcatca       <  2:27637/91‑1 (MQ=255)
                                                                            tCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCtcatca       <  1:2557009/93‑1 (MQ=255)
                                                                              aaaTTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCatcatc     <  2:692571/93‑1 (MQ=255)
                                                                              aaaTTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCatcatc     <  1:4674392/93‑1 (MQ=255)
                                                                               aaTTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCAtcc    <  1:6601384/93‑1 (MQ=255)
                                                                               aaTTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCAtcc    >  1:5379580/1‑93 (MQ=255)
                                                                               aaTTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCAtcc    <  1:1982431/93‑1 (MQ=255)
                                                                                aTTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCAtcct   <  2:4966425/93‑1 (MQ=255)
                                                                                aTTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCAtcct   <  2:2844300/93‑1 (MQ=255)
                                                                                aTTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCAtcct   >  1:5485186/1‑93 (MQ=255)
                                                                                       |                                                                                       
ATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATCGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTC  >  NC_000913/3743516‑3743690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 241 total aligned reads displayed.
ATGTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATCGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTG  >  NC_000913/3743510‑3743696
                                                                                             |                                                                                             
ATGTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATG                                                                                               <  SRR4302543.7137586/94‑1 (MQ=60)
ATGTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATG                                                                                               >  SRR4302543.7590771/1‑94 (MQ=60)
ATGTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATG                                                                                               >  SRR4302543.3001721/1‑94 (MQ=60)
ATGTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATG                                                                                               >  SRR4302543.1438500/1‑94 (MQ=60)
  TTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GAT                                                                                            <  SRR4302543.2355560/94‑1 (MQ=60)
  GTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GAT                                                                                            <  SRR4302543.5820071/94‑1 (MQ=60)
  GTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GAT                                                                                            <  SRR4302543.4925292/94‑1 (MQ=60)
   TTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATG                                                                                           <  SRR4302543.3328364/94‑1 (MQ=60)
    TTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGC                                                                                          <  SRR4302543.6599632/94‑1 (MQ=60)
     TATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCA                                                                                         >  SRR4302543.7725033/1‑94 (MQ=60)
      ATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAG                                                                                        <  SRR4302543.1414963/94‑1 (MQ=60)
      ATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAG                                                                                        <  SRR4302543.1433237/94‑1 (MQ=60)
      ATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAG                                                                                        <  SRR4302543.3166987/94‑1 (MQ=60)
      ATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAG                                                                                        <  SRR4302543.7977813/94‑1 (MQ=60)
      ATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAG                                                                                        <  SRR4302543.3977921/94‑1 (MQ=60)
      ATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAG                                                                                        <  SRR4302543.6409180/94‑1 (MQ=60)
       TCATTGACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGT                                                                                       >  SRR4302543.7908912/1‑94 (MQ=60)
       TCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGT                                                                                       <  SRR4302543.4266410/94‑1 (MQ=60)
       TCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGT                                                                                       <  SRR4302543.5374761/94‑1 (MQ=60)
       TCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGT                                                                                       >  SRR4302543.552449/1‑94 (MQ=60)
        CATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTC                                                                                      >  SRR4302543.7567575/1‑94 (MQ=60)
        CATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTC                                                                                      <  SRR4302543.1889326/94‑1 (MQ=60)
          TTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAG                                                                                    >  SRR4302543.6612514/1‑94 (MQ=60)
           TAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGA                                                                                   <  SRR4302543.1073952/94‑1 (MQ=60)
           TAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGA                                                                                   >  SRR4302543.1579494/1‑94 (MQ=60)
           TAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGA                                                                                   >  SRR4302543.3263188/1‑94 (MQ=60)
            NANNGNTNANNCNGCNTAATNNCNCNNCCTATCGNTAATGTACTTAACGTTATTTCANGGGTGNCAAAANTCAAATTCGAT‑GATGCAGTCAGAG                                                                                  <  SRR4302543.7423158/94‑1 (MQ=60)
            AACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAG                                                                                  >  SRR4302543.26921/1‑94 (MQ=60)
            AACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAG                                                                                  <  SRR4302543.3792012/94‑1 (MQ=60)
            AACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAG                                                                                  <  SRR4302543.1925016/94‑1 (MQ=60)
            AACTGCTCAATCGGCTTAATTACACCGCCTATCGGCAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAG                                                                                  >  SRR4302543.12248/1‑94 (MQ=60)
             ACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGG                                                                                 <  SRR4302543.3702436/94‑1 (MQ=60)
             ACTGCTCAATCGGCCTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGG                                                                                 <  SRR4302543.980279/94‑1 (MQ=60)
              CTGCTCAATCGGCTTAATTACACCGCCTATCTGTAATGTACTTCACGTTATTTCAGGGGTGTCAAAAATCCAATTCGAT‑GATGCAGTCcacggc                                                                                >  SRR4302543.4180396/1‑88 (MQ=60)
              CTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCCAAACTCAAATTCGAT‑GCTGCAGTCAGCGGC                                                                                >  SRR4302543.6424109/1‑94 (MQ=60)
              CTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGC                                                                                >  SRR4302543.2619851/1‑94 (MQ=60)
              CTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGC                                                                                >  SRR4302543.4180397/1‑94 (MQ=60)
              CTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGC                                                                                >  SRR4302543.6714473/1‑94 (MQ=60)
               TGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCG                                                                               <  SRR4302543.4264617/94‑1 (MQ=60)
               TGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCG                                                                               <  SRR4302543.7727882/94‑1 (MQ=60)
                   CAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTT                                                                           <  SRR4302543.4392514/94‑1 (MQ=60)
                   CAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTT                                                                           >  SRR4302543.1706361/1‑94 (MQ=60)
                   CAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTT                                                                           <  SRR4302543.3532885/94‑1 (MQ=60)
                    AATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTC                                                                          >  SRR4302543.6496686/1‑94 (MQ=60)
                     ATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCC                                                                         >  SRR4302543.684948/1‑94 (MQ=60)
                     ATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCC                                                                         >  SRR4302543.5194727/1‑94 (MQ=60)
                     ATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCC                                                                         >  SRR4302543.5695071/1‑94 (MQ=60)
                       CGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCT                                                                       <  SRR4302543.929285/94‑1 (MQ=60)
                       CGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCT                                                                       >  SRR4302543.7376722/1‑94 (MQ=60)
                        GGCTTAATTACACCGCCTATCGGTAATGTACTTCACGTTATTTCAGGGGTGGCAACACTCAAATTTGCT‑GATGTAGTCAGAGGCGTTTTCCCTT                                                                      >  SRR4302543.318458/1‑94 (MQ=60)
                        GGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTT                                                                      >  SRR4302543.318457/1‑94 (MQ=60)
                        GGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTT                                                                      >  SRR4302543.5714398/1‑94 (MQ=60)
                         GCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTA                                                                     <  SRR4302543.1621519/94‑1 (MQ=60)
                          CTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTAC                                                                    <  SRR4302543.4759246/94‑1 (MQ=60)
                          CTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTAC                                                                    <  SRR4302543.7786718/94‑1 (MQ=60)
                          CTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTAC                                                                    <  SRR4302543.7245797/94‑1 (MQ=60)
                           TTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACG                                                                   <  SRR4302543.914762/94‑1 (MQ=60)
                           TTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACG                                                                   >  SRR4302543.7050138/1‑94 (MQ=60)
                            TAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGT                                                                  >  SRR4302543.340845/1‑94 (MQ=60)
                              ATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCC                                                                >  SRR4302543.6779772/1‑94 (MQ=60)
                               TTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCT                                                               >  SRR4302543.3097676/1‑94 (MQ=60)
                                TACACCGCCTATCTGTAATGTACTTAACGTTATTTCAGAGGTGTCAAAACTCAAATTCGAT‑GATGCAGTCCGAGGCGCTTTCCGTTAACTCCTG                                                              >  SRR4302543.1361379/1‑94 (MQ=57)
                                TACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTG                                                              >  SRR4302543.1361380/1‑94 (MQ=60)
                                TACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTG                                                              <  SRR4302543.7027281/94‑1 (MQ=60)
                                 ACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGG                                                             <  SRR4302543.1586361/94‑1 (MQ=60)
                                 ACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGG                                                             >  SRR4302543.4085496/1‑94 (MQ=60)
                                  CACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGT                                                            <  SRR4302543.5226489/94‑1 (MQ=60)
                                  CACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGT                                                            >  SRR4302543.4295630/1‑94 (MQ=60)
                                  CACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGT                                                            <  SRR4302543.7980429/94‑1 (MQ=60)
                                   ACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTT                                                           >  SRR4302543.156054/1‑94 (MQ=60)
                                   ACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTT                                                           >  SRR4302543.3640088/1‑94 (MQ=60)
                                   ACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTT                                                           >  SRR4302543.4796653/1‑94 (MQ=60)
                                    CCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTT                                                          >  SRR4302543.5509268/1‑94 (MQ=60)
                                     CGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTT                                                         <  SRR4302543.1150498/94‑1 (MQ=60)
                                     CGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTT                                                         <  SRR4302543.1067623/94‑1 (MQ=60)
                                     CGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTT                                                         <  SRR4302543.5694680/94‑1 (MQ=60)
                                      GCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTA                                                        <  SRR4302543.4993811/94‑1 (MQ=60)
                                      GCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTA                                                        <  SRR4302543.4993812/94‑1 (MQ=60)
                                       CCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTAT                                                       <  SRR4302543.3616423/94‑1 (MQ=60)
                                       CCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTAT                                                       >  SRR4302543.7837368/1‑94 (MQ=60)
                                       CCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTAT                                                       <  SRR4302543.2008449/94‑1 (MQ=60)
                                        CTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAGAACTCAAATTCGAT‑GATGCAGTAAGAGGCGTTTTCCCTTACGTCttggtgttctt                                                      >  SRR4302543.3740457/1‑83 (MQ=60)
                                        CTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCTTGGTTTTATA                                                      >  SRR4302543.3740459/1‑94 (MQ=60)
                                        CTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATA                                                      <  SRR4302543.640089/94‑1 (MQ=60)
                                        CTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATA                                                      <  SRR4302543.287345/94‑1 (MQ=60)
                                        CTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATA                                                      >  SRR4302543.2204052/1‑94 (MQ=60)
                                        CTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATA                                                      >  SRR4302543.1061256/1‑94 (MQ=60)
                                        CTATCGGTAATGTACTTAACGTTATTTAAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTT‑TAT                                                     >  SRR4302543.1061255/1‑94 (MQ=60)
                                         TATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATAT                                                     <  SRR4302543.6188817/94‑1 (MQ=60)
                                         TATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATAT                                                     <  SRR4302543.5955568/94‑1 (MQ=60)
                                         TATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATAT                                                     <  SRR4302543.5211905/94‑1 (MQ=60)
                                          ATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATT                                                    >  SRR4302543.4279396/1‑94 (MQ=60)
                                          ATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATT                                                    >  SRR4302543.4279397/1‑94 (MQ=60)
                                          ATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATT                                                    <  SRR4302543.7326315/94‑1 (MQ=60)
                                          ATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATT                                                    <  SRR4302543.4501015/94‑1 (MQ=60)
                                          ATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATT                                                    <  SRR4302543.4501016/94‑1 (MQ=60)
                                          ATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGAAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATT                                                    >  SRR4302543.2449249/1‑94 (MQ=60)
                                           TCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTC                                                   <  SRR4302543.794250/94‑1 (MQ=60)
                                           TCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTC                                                   <  SRR4302543.879610/94‑1 (MQ=60)
                                           TCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTC                                                   <  SRR4302543.3415144/94‑1 (MQ=60)
                                            CGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCA                                                  <  SRR4302543.4662547/94‑1 (MQ=60)
                                            CGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCA                                                  <  SRR4302543.7509000/94‑1 (MQ=60)
                                             GGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCAT                                                 >  SRR4302543.5700278/1‑94 (MQ=60)
                                             GGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCAT                                                 >  SRR4302543.1922034/1‑94 (MQ=60)
                                             GGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTAAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCAT                                                 <  SRR4302543.7611932/94‑1 (MQ=60)
                                              GTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATT                                                <  SRR4302543.4113656/94‑1 (MQ=60)
                                               TAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTT                                               >  SRR4302543.5652986/1‑94 (MQ=60)
                                                AATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTAT                                              >  SRR4302543.5929236/1‑94 (MQ=60)
                                                AATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTAT                                              >  SRR4302543.2098967/1‑94 (MQ=60)
                                                AATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTAT                                              <  SRR4302543.565599/94‑1 (MQ=60)
                                                AATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTAT                                              <  SRR4302543.212521/94‑1 (MQ=60)
                                                AATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTAT                                              <  SRR4302543.7541380/94‑1 (MQ=60)
                                                AATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTAAATTCATTAT                                              <  SRR4302543.7444784/94‑1 (MQ=60)
                                                 ATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATT                                             <  SRR4302543.262192/94‑1 (MQ=60)
                                                 ATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGATTTCCCTTACGTCCTGGTTTTATATTCATTATT                                             >  SRR4302543.7693210/1‑94 (MQ=60)
                                                  TGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTA                                            <  SRR4302543.4966375/94‑1 (MQ=60)
                                                  TGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTA                                            <  SRR4302543.3051252/94‑1 (MQ=60)
                                                  TGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTA                                            >  SRR4302543.6783277/1‑94 (MQ=60)
                                                   GTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAG                                           >  SRR4302543.1679688/1‑94 (MQ=60)
                                                   GTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAG                                           >  SRR4302543.3379744/1‑94 (MQ=60)
                                                   GTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAG                                           <  SRR4302543.3194299/94‑1 (MQ=60)
                                                   GTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAG                                           <  SRR4302543.7129368/94‑1 (MQ=60)
                                                   GTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAG                                           <  SRR4302543.7129366/94‑1 (MQ=60)
                                                   GTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATGCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAG                                           <  SRR4302543.1132818/94‑1 (MQ=60)
                                                    TACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGT                                          >  SRR4302543.6579456/1‑94 (MQ=60)
                                                     TCTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTC                                         <  SRR4302543.6357341/94‑1 (MQ=60)
                                                      CTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCG                                        >  SRR4302543.5307642/1‑94 (MQ=60)
                                                      CTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCG                                        >  SRR4302543.1769794/1‑94 (MQ=60)
                                                      CTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCG                                        >  SRR4302543.4829162/1‑94 (MQ=60)
                                                      CTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCG                                        <  SRR4302543.5860654/94‑1 (MQ=60)
                                                       TTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGT                                       <  SRR4302543.721764/94‑1 (MQ=60)
                                                        TAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTA                                      >  SRR4302543.3735836/1‑94 (MQ=60)
                                                         AACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAT                                     <  SRR4302543.2315351/94‑1 (MQ=60)
                                                         AACATTATTTCAGGGGTGGCAAAACTCAAGTTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAT                                     <  SRR4302543.244558/94‑1 (MQ=60)
                                                          ACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATT                                    <  SRR4302543.5108081/94‑1 (MQ=60)
                                                           CGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTCCGTCCTGGTTTTATATTCATTATTAGTCGTATTT                                   <  SRR4302543.3700773/94‑1 (MQ=60)
                                                           CGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTT                                   <  SRR4302543.3065590/94‑1 (MQ=60)
                                                           CGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTT                                   <  SRR4302543.4598397/94‑1 (MQ=60)
                                                           CGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTT                                   <  SRR4302543.4390571/94‑1 (MQ=60)
                                                            GTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTG                                  >  SRR4302543.4123538/1‑94 (MQ=60)
                                                            GTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTG                                  <  SRR4302543.4875796/94‑1 (MQ=60)
                                                              TATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTT                                <  SRR4302543.7395771/94‑1 (MQ=60)
                                                              TATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTT                                <  SRR4302543.51278/94‑1 (MQ=60)
                                                              TATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTT                                <  SRR4302543.4640989/94‑1 (MQ=60)
                                                               ATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTT                               <  SRR4302543.2005997/94‑1 (MQ=60)
                                                               ATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTT                               >  SRR4302543.4160318/1‑94 (MQ=60)
                                                               ATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTT                               <  SRR4302543.2204161/94‑1 (MQ=60)
                                                               ATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTT                               <  SRR4302543.2204162/94‑1 (MQ=60)
                                                                TTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTT                              >  SRR4302543.3084159/1‑94 (MQ=60)
                                                                 TTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTT                             >  SRR4302543.1931773/1‑94 (MQ=60)
                                                                 TTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTT                             >  SRR4302543.6127011/1‑94 (MQ=60)
                                                                 TTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTT                             <  SRR4302543.5827614/94‑1 (MQ=60)
                                                                  TCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTA                            <  SRR4302543.6760493/94‑1 (MQ=60)
                                                                  TCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTA                            <  SRR4302543.2133302/94‑1 (MQ=60)
                                                                   CAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTAT                           >  SRR4302543.530072/1‑94 (MQ=60)
                                                                   CAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTAT                           <  SRR4302543.5388829/94‑1 (MQ=60)
                                                                    AGGGGTGTCAAAACTCAAATTCGAT‑GATGCCGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAGTTGTTTTTATT                          <  SRR4302543.7009194/94‑1 (MQ=60)
                                                                    AGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATT                          <  SRR4302543.7009195/94‑1 (MQ=60)
                                                                    AGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATT                          >  SRR4302543.3452907/1‑94 (MQ=60)
                                                                    AGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATT                          <  SRR4302543.2118668/94‑1 (MQ=60)
                                                                     GGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTC                         <  SRR4302543.6966415/94‑1 (MQ=60)
                                                                     GGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTATATATTCATTATTAGTCGTATTTGTTTTTATTC                         >  SRR4302543.7694753/1‑94 (MQ=60)
                                                                      GGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCC                        <  SRR4302543.2691502/94‑1 (MQ=60)
                                                                      GGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCC                        <  SRR4302543.7698351/94‑1 (MQ=60)
                                                                       GGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCC                       >  SRR4302543.118602/1‑94 (MQ=60)
                                                                        GTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCG                      >  SRR4302543.7919074/1‑94 (MQ=60)
                                                                         TGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGA                     >  SRR4302543.5440493/1‑94 (MQ=60)
                                                                          GGCAAAACTCAAATTCGAT‑GTTGCATTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGAT                    <  SRR4302543.2748836/94‑1 (MQ=60)
                                                                          GGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGAT                    >  SRR4302543.853159/1‑94 (MQ=60)
                                                                          GGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGAT                    <  SRR4302543.2748835/94‑1 (MQ=60)
                                                                           GCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATC                   <  SRR4302543.4663975/94‑1 (MQ=60)
                                                                             AAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTC                 >  SRR4302543.7952779/1‑94 (MQ=60)
                                                                             AAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTC                 >  SRR4302543.1813362/1‑94 (MQ=60)
                                                                             AAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTC                 >  SRR4302543.2946665/1‑94 (MQ=60)
                                                                             AAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTC                 >  SRR4302543.4537671/1‑94 (MQ=60)
                                                                               AACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCAT               <  SRR4302543.1040867/94‑1 (MQ=60)
                                                                                ACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATC              >  SRR4302543.2139979/1‑94 (MQ=60)
                                                                                 CTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCA             <  SRR4302543.1868564/94‑1 (MQ=60)
                                                                                  TCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCAT            <  SRR4302543.1772724/94‑1 (MQ=60)
                                                                                  TCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCAT            <  SRR4302543.2580385/94‑1 (MQ=60)
                                                                                   CAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATC           <  SRR4302543.4798193/94‑1 (MQ=60)
                                                                                   CAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATC           <  SRR4302543.7672209/94‑1 (MQ=60)
                                                                                    AAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCC          >  SRR4302543.5428363/1‑94 (MQ=60)
                                                                                     AATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCT         <  SRR4302543.6663591/94‑1 (MQ=60)
                                                                                     AATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCT         <  SRR4302543.3661733/94‑1 (MQ=60)
                                                                                     AATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCT         >  SRR4302543.5534910/1‑94 (MQ=60)
                                                                                      ATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTC        <  SRR4302543.1130233/94‑1 (MQ=60)
                                                                                       TTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCC       >  SRR4302543.1611367/1‑94 (MQ=60)
                                                                                        TCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCC      >  SRR4302543.4896874/1‑94 (MQ=60)
                                                                                        TCGAT‑GATGCAGTCAGAGGCGTGTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCC      <  SRR4302543.6990699/94‑1 (MQ=60)
                                                                                         CGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCT     >  SRR4302543.7935183/1‑94 (MQ=60)
                                                                                         CGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCT     <  SRR4302543.4523123/94‑1 (MQ=60)
                                                                                         CGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCT     <  SRR4302543.2784057/94‑1 (MQ=60)
                                                                                          GAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTT    <  SRR4302543.6357940/94‑1 (MQ=60)
                                                                                          GAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTT    >  SRR4302543.7903407/1‑94 (MQ=60)
                                                                                          GAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTT    >  SRR4302543.3395476/1‑94 (MQ=60)
                                                                                          GAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTT    <  SRR4302543.7512621/94‑1 (MQ=60)
                                                                                          GAT‑GATGCAGCCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTT    >  SRR4302543.6553764/1‑94 (MQ=60)
                                                                                             TGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTG  <  SRR4302543.6618924/94‑1 (MQ=60)
                                                                                             TGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTG  <  SRR4302543.385008/94‑1 (MQ=60)
                                                                                             |                                                                                             
ATGTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATCGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTG  >  NC_000913/3743510‑3743696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑