Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,804,546	T→C	E50G (GAG→GGG)	rfaG ←	glucosyltransferase I

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,804,546	0	T	C	99.8%	1410.2 / ‑4.8	437	E50G (GAG→GGG)	rfaG	glucosyltransferase I
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (216/220); minor base G (0/1); total (216/221)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01

Only 100 of 442 total aligned reads displayed.

GGATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATA  >  NC_000913/3804456‑3804635

ggATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCa                                                                                         <  1:4188459/93‑1 (MQ=255)

  aTGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCaaa                                                                                       <  1:6015942/93‑1 (MQ=255)

   tGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAAt                                                                                      >  1:7501648/1‑93 (MQ=255)

   tGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAAt                                                                                      >  2:6447444/1‑93 (MQ=255)

   tGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAAt                                                                                      <  2:278557/93‑1 (MQ=255)

    gCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATg                                                                                     >  2:1280984/1‑93 (MQ=255)

     ctctTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGc                                                                                    <  1:1611347/93‑1 (MQ=255)

     ctctTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGc                                                                                    >  2:4997022/1‑93 (MQ=255)

      tctTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCt                                                                                   >  2:3822025/1‑93 (MQ=255)

      tctTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCt                                                                                   >  1:4527419/1‑93 (MQ=255)

      tctTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCt                                                                                   >  1:93635/1‑93 (MQ=255)

       ctTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCtt                                                                                  <  2:2650592/93‑1 (MQ=255)

        tttGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCttt                                                                                 >  1:3817185/1‑93 (MQ=255)

        tttGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCttt                                                                                 >  2:4201883/1‑93 (MQ=255)

        tttGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCttt                                                                                 >  1:3588111/1‑93 (MQ=255)

        tttGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCttt                                                                                 <  2:7169464/93‑1 (MQ=255)

         ttGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCttta                                                                                <  2:7044830/93‑2 (MQ=255)

         ttGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTc                                                                                <  1:6087745/93‑1 (MQ=255)

         ttGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTc                                                                                <  1:5014218/93‑1 (MQ=255)

         ttGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTAAACTGGCACCTGAATAAGCCCAAATGCTTTc                                                                                >  2:3323622/1‑93 (MQ=255)

          tGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCg                                                                               >  1:2838363/1‑93 (MQ=255)

           gagaTGATTTTGTACCCAGGCATAATATCCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCgg                                                                              <  1:5257471/93‑1 (MQ=255)

            agaTGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCggg                                                                             <  1:5423371/93‑1 (MQ=255)

            agaTGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCagg                                                                             >  1:817332/1‑93 (MQ=255)

               tgatTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCaa                                                                          >  2:2459357/1‑93 (MQ=255)

               tgatTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCaa                                                                          <  2:7239234/93‑1 (MQ=255)

                 atTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATc                                                                        <  1:2724504/93‑1 (MQ=255)

                 atTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATc                                                                        <  1:3746074/93‑1 (MQ=255)

                 atTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATc                                                                        <  2:38533/93‑1 (MQ=255)

                    ttGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGcc                                                                     <  2:6027844/93‑1 (MQ=255)

                    ttGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGcc                                                                     >  2:6306791/1‑93 (MQ=255)

                     tGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCt                                                                    <  2:5466398/93‑1 (MQ=255)

                     tGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCt                                                                    <  1:2054171/93‑1 (MQ=255)

                      gTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCtt                                                                   <  1:5924143/93‑1 (MQ=255)

                      gTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCtt                                                                   >  1:2622905/1‑93 (MQ=255)

                        aCCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTcc                                                                 <  2:618827/93‑1 (MQ=255)

                          ccAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCa                                                               <  1:2359096/93‑1 (MQ=255)

                           cAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCAc                                                              >  1:1479082/1‑93 (MQ=255)

                             ggCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGa                                                            >  2:891887/1‑93 (MQ=255)

                              gCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGAc                                                           <  1:6234087/93‑1 (MQ=255)

                               cATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACt                                                          >  1:7089427/1‑93 (MQ=255)

                                ataataTTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACtg                                                         >  1:6488765/1‑93 (MQ=255)

                                ataataTTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACtg                                                         >  1:5359220/1‑93 (MQ=255)

                                 taataTTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACtgt                                                        >  1:6910285/1‑93 (MQ=255)

                                 taataTTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACtgt                                                        <  1:4129645/93‑1 (MQ=255)

                                  aataTTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACtgtg                                                       <  2:1877446/93‑1 (MQ=255)

                                    tatTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGta                                                     >  2:5790214/1‑93 (MQ=255)

                                    tatTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGta                                                     >  2:6817877/1‑93 (MQ=255)

                                    tatTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGta                                                     >  1:7744126/1‑93 (MQ=255)

                                    tatTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGta                                                     <  2:5675618/93‑1 (MQ=255)

                                    tatTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGta                                                     >  1:6999999/1‑93 (MQ=255)

                                     atTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGtat                                                    >  1:3151986/1‑93 (MQ=255)

                                     atTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGtat                                                    >  1:1937601/1‑93 (MQ=255)

                                      ttCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGtata                                                   <  1:4444133/93‑1 (MQ=255)

                                       tCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGtatat                                                  >  2:4002623/1‑93 (MQ=255)

                                         tGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATAc                                                >  2:4450594/1‑93 (MQ=255)

                                          gCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAAt                                                                         <  2:7839175/67‑1 (MQ=255)

                                          gCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAAt                                                                         >  1:7839176/1‑67 (MQ=255)

                                            aTTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCg                                             >  2:7581586/1‑93 (MQ=255)

                                                cGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACa                                         <  1:4339181/93‑1 (MQ=255)

                                                cGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACa                                         <  1:6546639/93‑1 (MQ=255)

                                                cGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACa                                         <  1:2532871/93‑1 (MQ=255)

                                                 gTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACAt                                        <  2:296756/93‑1 (MQ=255)

                                                   ccATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACAtgg                                      >  1:4038438/1‑93 (MQ=255)

                                                   ccATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACAtgg                                      >  2:7302208/1‑93 (MQ=255)

                                                    cATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACAtggt                                     >  1:6333921/1‑93 (MQ=255)

                                                    cATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACAtggt                                     <  1:4515093/93‑1 (MQ=255)

                                                    cATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACAtggt                                     >  2:1052574/1‑93 (MQ=255)

                                                    cATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACAtggt                                     >  1:1013713/1‑93 (MQ=255)

                                                     aTGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACAtggtg                                    <  2:4564998/93‑1 (MQ=255)

                                                     aTGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACAtggtg                                    <  2:1004454/93‑1 (MQ=255)

                                                     aTGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACAtggtg                                    <  2:1746991/93‑1 (MQ=255)

                                                      tggttggtATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACAtggtgg                                   >  2:5338435/1‑93 (MQ=255)

                                                      tggttggtATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACAtggtgg                                   >  1:4889776/1‑93 (MQ=255)

                                                         ttggtATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGccc                                >  1:1174354/1‑93 (MQ=255)

                                                              aTGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGc                           >  1:3334715/1‑93 (MQ=255)

                                                                 ggACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCGACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCgga                        >  1:5732890/1‑92 (MQ=255)

                                                                 ggACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGc                        <  1:7253940/93‑1 (MQ=255)

                                                                 ggACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGc                        >  2:5100480/1‑93 (MQ=255)

                                                                 ggACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGc                        >  1:4720221/1‑93 (MQ=255)

                                                                   aCTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCaa                      <  1:177014/93‑1 (MQ=255)

                                                                   aCTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCaa                      >  2:2261868/1‑93 (MQ=255)

                                                                   aCTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCaa                      >  2:2156966/1‑93 (MQ=255)

                                                                     ttAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACt                    >  2:3614382/1‑93 (MQ=255)

                                                                     ttAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACt                    <  2:3055380/93‑1 (MQ=255)

                                                                      tAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTg                   >  2:4777208/1‑93 (MQ=255)

                                                                       aaCTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGt                  <  2:3173499/93‑1 (MQ=255)

                                                                       aaCTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGt                  <  1:3760568/93‑1 (MQ=255)

                                                                        aCTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGtt                 <  1:1336648/93‑1 (MQ=255)

                                                                        aCTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGtt                 <  2:195599/93‑1 (MQ=255)

                                                                          tGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGa               <  1:3062298/93‑1 (MQ=255)

                                                                          tGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGa               <  2:1400505/93‑1 (MQ=255)

                                                                          tGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGa               >  2:6538888/1‑93 (MQ=255)

                                                                          tGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGa               <  2:1116272/93‑1 (MQ=255)

                                                                           ggCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGAt              <  1:669544/93‑1 (MQ=255)

                                                                             cACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGc            <  1:5635709/93‑1 (MQ=255)

                                                                                cTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAAt         >  2:5582966/1‑93 (MQ=255)

                                                                                cTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAAt         <  2:4847439/93‑1 (MQ=255)

                                                                                cTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAAt         <  2:81854/93‑1 (MQ=255)

                                                                                    aTAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGGAATgcgc     >  1:4773847/1‑93 (MQ=255)

GGATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATA  >  NC_000913/3804456‑3804635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 247 total aligned reads displayed.

GCGGGATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGT  >  NC_000913/3804453‑3804639

GCGGGATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCC                                                                                               <  SRR4302543.2426339/94‑1 (MQ=60)

GCGGGATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCC                                                                                               >  SRR4302543.2784312/1‑94 (MQ=60)

GCGGGATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCC                                                                                               <  SRR4302543.1346414/94‑1 (MQ=60)

 CGGGATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCC                                                                                              >  SRR4302543.197250/1‑94 (MQ=60)

  GGGATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCA                                                                                             >  SRR4302543.837331/1‑94 (MQ=60)

  GGGATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCA                                                                                             >  SRR4302543.987591/1‑94 (MQ=60)

   GGATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAA                                                                                            <  SRR4302543.5032844/94‑1 (MQ=60)

   GGATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAA                                                                                            <  SRR4302543.4226431/94‑1 (MQ=60)

   GGATGCTCTTTGAGATGATGTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAA                                                                                            <  SRR4302543.4949650/94‑1 (MQ=60)

     ATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAAT                                                                                          >  SRR4302543.6304222/1‑94 (MQ=60)

     ATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAAT                                                                                          >  SRR4302543.7573375/1‑94 (MQ=60)

     ATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAAT                                                                                          >  SRR4302543.2924175/1‑94 (MQ=60)

     ATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAAT                                                                                          <  SRR4302543.6347378/94‑1 (MQ=60)

     ATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAAT                                                                                          <  SRR4302543.4501048/94‑1 (MQ=60)

     ATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAAT                                                                                          <  SRR4302543.1373476/94‑1 (MQ=60)

     ATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAAT                                                                                          <  SRR4302543.6071573/94‑1 (MQ=60)

      TGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATG                                                                                         >  SRR4302543.5368300/1‑94 (MQ=60)

      TGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATG                                                                                         <  SRR4302543.1077920/94‑1 (MQ=60)

       GCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGC                                                                                        >  SRR4302543.3802349/1‑94 (MQ=60)

       GCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGC                                                                                        >  SRR4302543.4777625/1‑94 (MQ=60)

        CTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCT                                                                                       >  SRR4302543.6723391/1‑94 (MQ=60)

        CTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCT                                                                                       <  SRR4302543.2624253/94‑1 (MQ=60)

        CTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCT                                                                                       >  SRR4302543.4568620/1‑94 (MQ=60)

        CTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCT                                                                                       <  SRR4302543.1625722/94‑1 (MQ=60)

        CTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCT                                                                                       >  SRR4302543.94505/1‑94 (MQ=60)

        CTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCT                                                                                       <  SRR4302543.1584242/94‑1 (MQ=60)

         TCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATTGGACTTAACTGGCACCTGAATAAGCCCAAATGCTT                                                                                      <  SRR4302543.1857003/94‑1 (MQ=60)

         TCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTT                                                                                      >  SRR4302543.3486367/1‑94 (MQ=60)

          CTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTT                                                                                     >  SRR4302543.4872188/1‑94 (MQ=60)

          CTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTT                                                                                     >  SRR4302543.3619797/1‑94 (MQ=60)

          CTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTT                                                                                     >  SRR4302543.3850842/1‑94 (MQ=60)

          CTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTT                                                                                     <  SRR4302543.90189/94‑1 (MQ=60)

          CTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTT                                                                                     >  SRR4302543.2570175/1‑94 (MQ=60)

           TTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTC                                                                                    >  SRR4302543.323157/1‑94 (MQ=60)

           TTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTC                                                                                    <  SRR4302543.249070/94‑1 (MQ=60)

            TTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCG                                                                                   <  SRR4302543.1349737/94‑1 (MQ=60)

            TTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCG                                                                                   <  SRR4302543.3889009/94‑1 (MQ=60)

            TTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCG                                                                                   <  SRR4302543.2743767/94‑1 (MQ=60)

            TTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCG                                                                                   >  SRR4302543.2864311/1‑94 (MQ=60)

             TGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACGTGAATAAGCCAAAATGCTTTCGG                                                                                  >  SRR4302543.2670001/1‑94 (MQ=60)

             TGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGG                                                                                  <  SRR4302543.7867777/94‑1 (MQ=60)

             TGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGG                                                                                  <  SRR4302543.2056975/94‑1 (MQ=60)

              GAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGG                                                                                 >  SRR4302543.3740979/1‑94 (MQ=60)

              GAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCAGG                                                                                 >  SRR4302543.824524/1‑94 (MQ=60)

              GAGATGATTTTGTACCCAGGCATAATATCCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGG                                                                                 <  SRR4302543.5304884/94‑1 (MQ=60)

               AGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGC                                                                                >  SRR4302543.5338465/1‑94 (MQ=60)

               AGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGC                                                                                >  SRR4302543.3242140/1‑94 (MQ=60)

               AGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGC                                                                                >  SRR4302543.1007080/1‑94 (MQ=60)

               AGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGC                                                                                <  SRR4302543.5472672/94‑1 (MQ=60)

                  TGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAAT                                                                             >  SRR4302543.4427972/1‑94 (MQ=60)

                   GATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATC                                                                            <  SRR4302543.6597581/94‑1 (MQ=60)

                    ATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCG                                                                           <  SRR4302543.3779026/94‑1 (MQ=60)

                    ATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCG                                                                           <  SRR4302543.6252168/94‑1 (MQ=60)

                    ATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCG                                                                           <  SRR4302543.2749286/94‑1 (MQ=60)

                     TTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGC                                                                          <  SRR4302543.7442655/94‑1 (MQ=60)

                      TTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCC                                                                         >  SRR4302543.66199/1‑94 (MQ=60)

                       TTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCT                                                                        <  SRR4302543.990967/94‑1 (MQ=60)

                        TGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTT                                                                       <  SRR4302543.2072560/94‑1 (MQ=60)

                        TGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTT                                                                       >  SRR4302543.2646658/1‑94 (MQ=60)

                         GTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTC                                                                      <  SRR4302543.5978275/94‑1 (MQ=60)

                         GTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTC                                                                      <  SRR4302543.6556917/94‑1 (MQ=60)

                          TACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCC                                                                     >  SRR4302543.6193475/1‑94 (MQ=60)

                           ACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCC                                                                    >  SRR4302543.2827791/1‑94 (MQ=60)

                             CCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCAC                                                                  <  SRR4302543.2380490/94‑1 (MQ=60)

                             CCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCAC                                                                  >  SRR4302543.4310378/1‑94 (MQ=60)

                                GGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGAC                                                               <  SRR4302543.1781132/94‑1 (MQ=60)

                                 GCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACT                                                              >  SRR4302543.7158270/1‑94 (MQ=60)

                                 GCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACT                                                              >  SRR4302543.7158269/1‑94 (MQ=60)

                                 GCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACT                                                              <  SRR4302543.338451/94‑1 (MQ=60)

                                  CATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTG                                                             >  SRR4302543.5407721/1‑94 (MQ=60)

                                  CATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTG                                                             >  SRR4302543.4471799/1‑94 (MQ=60)

                                  CATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTG                                                             <  SRR4302543.2442897/94‑1 (MQ=60)

                                  CATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTG                                                             >  SRR4302543.6549893/1‑94 (MQ=60)

                                   ATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGT                                                            >  SRR4302543.4562894/1‑94 (MQ=60)

                                   ATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGT                                                            >  SRR4302543.6975233/1‑94 (MQ=60)

                                   ATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGT                                                            >  SRR4302543.6975231/1‑94 (MQ=60)

                                   ATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGT                                                            >  SRR4302543.3772641/1‑94 (MQ=60)

                                   ATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAAGCGCCTTCCCACGACTGT                                                            >  SRR4302543.7102755/1‑94 (MQ=60)

                                    TAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTG                                                           <  SRR4302543.4166894/94‑1 (MQ=60)

                                    TAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTG                                                           <  SRR4302543.128835/94‑1 (MQ=60)

                                     AATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGT                                                          >  SRR4302543.7433491/1‑94 (MQ=60)

                                      ATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTA                                                         >  SRR4302543.7817273/1‑94 (MQ=60)

                                      ATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTA                                                         >  SRR4302543.7066271/1‑94 (MQ=60)

                                      ATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTA                                                         <  SRR4302543.4463243/94‑1 (MQ=60)

                                       TATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTAT                                                        >  SRR4302543.1955012/1‑94 (MQ=60)

                                        ATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTACCACGACTGTGTATA                                                       >  SRR4302543.7397563/1‑94 (MQ=60)

                                         TTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATAT                                                      <  SRR4302543.3698966/94‑1 (MQ=60)

                                         TTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATAT                                                      >  SRR4302543.5788046/1‑94 (MQ=60)

                                         TTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATAT                                                      <  SRR4302543.4976060/94‑1 (MQ=60)

                                           CTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATAC                                                    >  SRR4302543.7680703/1‑94 (MQ=60)

                                           CTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATAC                                                    >  SRR4302543.7127315/1‑94 (MQ=60)

                                           CTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATAC                                                    >  SRR4302543.6989504/1‑94 (MQ=60)

                                           CTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATAC                                                    >  SRR4302543.6011884/1‑94 (MQ=60)

                                           CTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATAC                                                    <  SRR4302543.409389/94‑1 (MQ=60)

                                            TGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCagagtggagatcggaagagcggttc                                                   >  SRR4302543.7912992/1‑69 (MQ=60)

                                            TGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACC                                                   <  SRR4302543.3601530/94‑1 (MQ=60)

                                             GCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCC                                                  <  SRR4302543.5994692/94‑1 (MQ=60)

                                              CATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCG                                                 >  SRR4302543.439296/1‑94 (MQ=60)

                                                TTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAA                                               >  SRR4302543.2343323/1‑94 (MQ=60)

                                                  GCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACA                                             <  SRR4302543.6141371/94‑1 (MQ=60)

                                                  GCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACA                                             <  SRR4302543.627862/94‑1 (MQ=60)

                                                   CGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACAT                                            <  SRR4302543.2555934/94‑1 (MQ=60)

                                                   CGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACAT                                            <  SRR4302543.6478039/94‑1 (MQ=60)

                                                   CGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACAT                                            <  SRR4302543.6608258/94‑1 (MQ=60)

                                                   CGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACAT                                            >  SRR4302543.312595/1‑94 (MQ=60)

                                                    GTCCATGGTTGGTATGGGGCTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACCACTGAGTATATACGCGAACATG                                           >  SRR4302543.4266359/1‑94 (MQ=60)

                                                    GTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATG                                           <  SRR4302543.2595452/94‑1 (MQ=60)

                                                    CTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATG                                           <  SRR4302543.4217600/94‑1 (MQ=60)

                                                     TCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGG                                          >  SRR4302543.5547001/1‑94 (MQ=60)

                                                     TCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGG                                          >  SRR4302543.4074577/1‑94 (MQ=60)

                                                      CCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGT                                         <  SRR4302543.787011/94‑1 (MQ=60)

                                                      CCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGT                                         >  SRR4302543.6393491/1‑94 (MQ=60)

                                                      CCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGT                                         >  SRR4302543.1022683/1‑94 (MQ=60)

                                                      CCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGT                                         >  SRR4302543.2319258/1‑94 (MQ=60)

                                                      CCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGT                                         <  SRR4302543.485734/94‑1 (MQ=60)

                                                       CATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTG                                        <  SRR4302543.4556159/94‑1 (MQ=60)

                                                       CATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTG                                        <  SRR4302543.5226980/94‑1 (MQ=60)

                                                       CATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTG                                        >  SRR4302543.3924195/1‑94 (MQ=60)

                                                       CATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCCTCCCACGACTGTGTATATACCCGAACATGGTG                                        <  SRR4302543.3917268/94‑1 (MQ=60)

                                                        ATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGG                                       <  SRR4302543.4194761/94‑1 (MQ=60)

                                                        ATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGG                                       >  SRR4302543.2050219/1‑94 (MQ=60)

                                                        ATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGG                                       >  SRR4302543.7888957/1‑94 (MQ=60)

                                                        ATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGG                                       >  SRR4302543.6373966/1‑94 (MQ=60)

                                                        ATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGG                                       >  SRR4302543.3791418/1‑94 (MQ=60)

                                                        ATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGG                                       >  SRR4302543.4934352/1‑94 (MQ=60)

                                                         TGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGC                                      <  SRR4302543.2910240/94‑1 (MQ=60)

                                                           GTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATTGTGGCCC                                    >  SRR4302543.11729/1‑94 (MQ=60)

                                                           GTTGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCC                                    >  SRR4302543.3205207/1‑94 (MQ=60)

                                                             TGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCG                                  <  SRR4302543.7575138/94‑1 (MQ=60)

                                                             TGGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCG                                  <  SRR4302543.3109213/94‑1 (MQ=60)

                                                              GGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGT                                 <  SRR4302543.1763598/94‑1 (MQ=60)

                                                              GGTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGT                                 <  SRR4302543.2922478/94‑1 (MQ=60)

                                                               GTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTG                                <  SRR4302543.6538143/94‑1 (MQ=60)

                                                               GTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTG                                >  SRR4302543.4187121/1‑94 (MQ=60)

                                                               GTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTG                                >  SRR4302543.5472071/1‑94 (MQ=60)

                                                               GTATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGCCCCCGTG                                >  SRR4302543.4683804/1‑94 (MQ=60)

                                                                 ATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCG                              >  SRR4302543.7177330/1‑94 (MQ=60)

                                                                 ATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCG                              >  SRR4302543.6273821/1‑94 (MQ=60)

                                                                 ATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCG                              >  SRR4302543.5963475/1‑94 (MQ=60)

                                                                 ATGGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCG                              >  SRR4302543.1651005/1‑94 (MQ=60)

                                                                   GGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCGACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGA                            >  SRR4302543.5785200/1‑94 (MQ=60)

                                                                   GGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGC                            >  SRR4302543.4654997/1‑94 (MQ=60)

                                                                   GGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGC                            >  SRR4302543.4763352/1‑94 (MQ=60)

                                                                   GGGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGC                            >  SRR4302543.4868273/1‑94 (MQ=60)

                                                                    GGACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCA                           <  SRR4302543.7324075/94‑1 (MQ=60)

                                                                      ACTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAAC                         <  SRR4302543.178528/94‑1 (MQ=60)

                                                                       CTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACT                        <  SRR4302543.6775436/94‑1 (MQ=60)

                                                                       CTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACT                        >  SRR4302543.813086/1‑94 (MQ=60)

                                                                       CTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACT                        >  SRR4302543.813087/1‑94 (MQ=60)

                                                                       CTTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGCGGCCCCGCGCGGCAACT                        >  SRR4302543.5754289/1‑94 (MQ=60)

                                                                        TTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTG                       <  SRR4302543.5846684/94‑1 (MQ=60)

                                                                        TTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTG                       <  SRR4302543.183007/94‑1 (MQ=60)

                                                                        TTAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTG                       <  SRR4302543.6419880/94‑1 (MQ=60)

                                                                         TAACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGT                      >  SRR4302543.3279395/1‑94 (MQ=60)

                                                                          AACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTT                     <  SRR4302543.3793661/94‑1 (MQ=60)

                                                                          AACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTT                     <  SRR4302543.1309601/94‑1 (MQ=60)

                                                                          AACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTT                     <  SRR4302543.6136682/94‑1 (MQ=60)

                                                                          AACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTT                     <  SRR4302543.6111799/94‑1 (MQ=60)

                                                                           ACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTG                    <  SRR4302543.77746/94‑1 (MQ=60)

                                                                           ACTGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTG                    >  SRR4302543.45572/1‑94 (MQ=60)

                                                                             cggccCCTGAATAAGCCCAAATGCTTTCGGGGCATCGCCTTCCCACGACTGTGTATATTCCCGAACATTGTGGCCCCGTGCGGCAACTGTTGAT                  <  SRR4302543.5480516/89‑1 (MQ=60)

                                                                             TGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATCCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGAT                  <  SRR4302543.3784579/94‑1 (MQ=60)

                                                                             TGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGAT                  <  SRR4302543.1491021/94‑1 (MQ=60)

                                                                             TGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGAT                  <  SRR4302543.3131958/94‑1 (MQ=60)

                                                                             TGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGAT                  <  SRR4302543.3089841/94‑1 (MQ=60)

                                                                             TGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGAT                  <  SRR4302543.4526646/94‑1 (MQ=60)

                                                                             TGGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGAT                  <  SRR4302543.477149/94‑1 (MQ=60)

                                                                              GGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATG                 <  SRR4302543.4270507/94‑1 (MQ=60)

                                                                              GGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATG                 <  SRR4302543.5253683/94‑1 (MQ=60)

                                                                              GGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATG                 <  SRR4302543.675712/94‑1 (MQ=60)

                                                                              GGCACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATA                 <  SRR4302543.141478/94‑1 (MQ=60)

                                                                                CCCCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCA               <  SRR4302543.5431488/94‑1 (MQ=60)

                                                                                CACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCA               <  SRR4302543.5687077/94‑1 (MQ=60)

                                                                                 ACCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAA              >  SRR4302543.4668780/1‑94 (MQ=60)

                                                                                  CCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAAT             >  SRR4302543.7205269/1‑94 (MQ=60)

                                                                                  CCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAAT             <  SRR4302543.5176510/94‑1 (MQ=60)

                                                                                  CCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAAT             <  SRR4302543.1567106/94‑1 (MQ=60)

                                                                                  CCTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAAT             <  SRR4302543.4152977/94‑1 (MQ=60)

                                                                                   CTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATG            <  SRR4302543.1566528/94‑1 (MQ=60)

                                                                                   CTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATG            >  SRR4302543.1148967/1‑94 (MQ=60)

                                                                                   CTGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATG            <  SRR4302543.2077643/94‑1 (MQ=60)

                                                                                    TGAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCACTGC           >  SRR4302543.1308089/1‑94 (MQ=60)

                                                                                     GAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCG          <  SRR4302543.5673131/94‑1 (MQ=60)

                                                                                     GAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCG          >  SRR4302543.5219560/1‑94 (MQ=60)

                                                                                     GAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCG          <  SRR4302543.6634413/94‑1 (MQ=60)

                                                                                     GAATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCG          >  SRR4302543.7010640/1‑94 (MQ=60)

                                                                                      AATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGC         >  SRR4302543.3841360/1‑94 (MQ=60)

                                                                                       ATAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCA        >  SRR4302543.5658345/1‑94 (MQ=60)

                                                                                        TAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCAT       <  SRR4302543.2775068/94‑1 (MQ=60)

                                                                                        TAAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCAT       >  SRR4302543.5759902/1‑94 (MQ=60)

                                                                                         AAGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATA      >  SRR4302543.2749838/1‑94 (MQ=60)

                                                                                          AGCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAA     <  SRR4302543.4803473/94‑1 (MQ=60)

                                                                                           GCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAA    <  SRR4302543.3712034/94‑1 (MQ=60)

                                                                                           GCCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAA    <  SRR4302543.3846143/94‑1 (MQ=60)

                                                                                            CCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAG   >  SRR4302543.699552/1‑94 (MQ=60)

                                                                                            CCCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAG   >  SRR4302543.6978576/1‑94 (MQ=60)

                                                                                             CCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGT  <  SRR4302543.1757196/94‑1 (MQ=60)

                                                                                             CCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGT  <  SRR4302543.6747840/94‑1 (MQ=60)

                                                                                             CCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGT  <  SRR4302543.5634255/94‑1 (MQ=60)

                                                                                             CCAAATGCGTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGT  <  SRR4302543.4863140/94‑1 (MQ=60)

GCGGGATGCTCTTTGAGATGATTTTGTACCCAGGCATAATATTCTGCATTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGT  >  NC_000913/3804453‑3804639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`