Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,816,555 (G)5→6 coding (55/618 nt) b3646 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,816,5501.G98.2% 1238.8 / 11.0 399coding (50/618 nt)b3646hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (2/5);  new base G (176/216);  total (178/221)
Fisher's exact test for biased strand distribution p-value = 4.68e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 451 total aligned reads displayed.

CACAAATCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑GGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGT  >  NC_000913/3816458‑3816637
                                                                                             |                                                                                        
 acaAATCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑g                                                                                         >  2:7751962/1‑93 (MQ=255)
  caAATCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑gg                                                                                        <  2:1303944/93‑1 (MQ=255)
  aaaaGCGCTACCCTGCCAGACAGATATTTAGGGAGAAAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACAGCCTAAGCCATGAC‑gg                                                                                        <  2:4602435/92‑1 (MQ=255)
   aaaTCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑ggg                                                                                       >  2:702567/1‑93 (MQ=255)
    aaTCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑ggg‑g                                                                                     >  1:4082618/1‑93 (MQ=255)
    aaTCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑ggg‑g                                                                                     >  2:6417148/1‑93 (MQ=255)
     aTCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑ggg‑gg                                                                                    >  2:5933193/1‑93 (MQ=255)
     aTCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑ggg‑gg                                                                                    <  1:4954094/93‑1 (MQ=255)
      tCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑ggg‑ggg                                                                                   <  1:7358966/93‑2 (MQ=255)
        gCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑ggg‑gggcg                                                                                 >  2:42975/1‑90 (MQ=255)
         cTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑ggg‑gggcgc                                                                                >  2:228716/1‑89 (MQ=255)
         cTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑ggg‑gggcgc                                                                                <  1:5443994/93‑5 (MQ=255)
         cTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑ggg‑gggcgc                                                                                <  1:4323729/93‑5 (MQ=255)
            cccTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTgg                                                                              <  2:7090704/93‑1 (MQ=255)
              cTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTggcg                                                                            >  2:575595/1‑93 (MQ=255)
                 ccAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGcc                                                                         >  2:5255953/1‑93 (MQ=255)
                   agacagaTTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCgg                                                                       >  2:5064486/1‑93 (MQ=255)
                   agacagaTTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCgg                                                                       <  2:7404692/93‑1 (MQ=255)
                    gacagaTTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGga                                                                      <  1:6881796/93‑1 (MQ=255)
                      cagaTTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGgacg                                                                    >  1:6543730/1‑93 (MQ=255)
                        gaTTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGgacgac                                                                  >  1:4479204/1‑93 (MQ=255)
                        gaTTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGgacgac                                                                  <  1:5702180/93‑1 (MQ=255)
                        gaTTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGgacgac                                                                  <  1:886321/93‑1 (MQ=255)
                          tttttAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACgg                                                                >  2:5173097/1‑93 (MQ=255)
                          tttttAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACgg                                                                <  2:5427493/93‑1 (MQ=255)
                           ttttAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGgc                                                               >  1:7818501/1‑93 (MQ=255)
                           ttttAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGgc                                                               <  1:1081506/93‑1 (MQ=255)
                            tttAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGgcg                                                              <  2:1245396/93‑1 (MQ=255)
                            tttAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGgcg                                                              >  1:1611646/1‑93 (MQ=255)
                              tAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTCCTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCa                                                            <  2:6094112/93‑1 (MQ=255)
                              tAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCa                                                            <  1:261825/93‑1 (MQ=255)
                               aGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCag                                                           >  2:4891396/1‑92 (MQ=255)
                               aGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCAt                                                           <  2:1762216/93‑1 (MQ=255)
                                gggAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATg                                                          <  1:3867931/93‑1 (MQ=255)
                                gggAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATg                                                          <  1:3983770/93‑1 (MQ=255)
                                  gagagaACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGa                                                        >  2:1092282/1‑93 (MQ=255)
                                  gagagaACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGa                                                        >  1:3043705/1‑93 (MQ=255)
                                   agagaACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGAt                                                       <  2:675492/93‑1 (MQ=255)
                                   agagaACCATGCTGTTACACATTGTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGAt                                                       <  1:6830600/93‑1 (MQ=255)
                                      gagccATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑GGGTGGCGCTGGCGGCCGGACGACGGCGCATGGATACa                                                    <  1:1254668/90‑1 (MQ=255)
                                      gaACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACa                                                    <  1:3632757/93‑1 (MQ=255)
                                      gaACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACa                                                    >  2:5887273/1‑93 (MQ=255)
                                      gaACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACa                                                    >  1:7623000/1‑93 (MQ=255)
                                        aCCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACAtt                                                  <  2:6222851/93‑1 (MQ=255)
                                        aCCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACAtt                                                  >  1:5291430/1‑93 (MQ=255)
                                        aCCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACAtt                                                  <  2:2788113/93‑1 (MQ=255)
                                         ccATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACAttt                                                 >  1:6387793/1‑93 (MQ=255)
                                         ccAGGCTGTTCCACATTTTGTATTTGGTTGGCTTTACTGCCGAGGCAATGACGGGG‑GGCGCTGGCCGCCGGACGACGTCGCATGGATACAttt                                                 <  2:7638500/93‑1 (MQ=255)
                                          cATGCTGTTACACATTATGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTg                                                <  1:6198706/93‑1 (MQ=255)
                                            tGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGc                                              <  2:2392693/93‑1 (MQ=255)
                                            tGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGc                                              <  1:3437125/93‑1 (MQ=255)
                                               tGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTa                                           >  2:3511909/1‑93 (MQ=255)
                                               tGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTa                                           >  2:7470827/1‑93 (MQ=255)
                                                  tACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAatt                                        >  1:2260248/1‑93 (MQ=255)
                                                  tACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAatt                                        <  1:6753483/93‑1 (MQ=255)
                                                   acaaATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCGGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAatta                                       <  1:101228/93‑1 (MQ=255)
                                                    cacaTTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAattat                                      <  2:4401872/93‑1 (MQ=255)
                                                     acaTTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGGCGGCGCAGGGATACATTTTGCGTTattatt                                     >  2:3679258/1‑93 (MQ=255)
                                                     acaTTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAattatt                                     >  1:1906099/1‑93 (MQ=255)
                                                      caTTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAattatta                                    <  1:2382505/93‑1 (MQ=255)
                                                      caTTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAattatta                                    >  1:7483713/1‑93 (MQ=255)
                                                       aTTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAattattat                                   >  1:3243835/1‑93 (MQ=255)
                                                       aTTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAattattat                                   <  2:3357780/93‑1 (MQ=255)
                                                       aTTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAattattat                                   >  2:3662675/1‑93 (MQ=255)
                                                        ttttGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAattattatt                                  <  1:2542961/93‑1 (MQ=255)
                                                        ttttGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAattattatt                                  <  1:2818709/93‑1 (MQ=255)
                                                         tttGTATTTGGTTGGCATTACTGCCGAGGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTg                                 <  1:3217985/93‑1 (MQ=255)
                                                          ttGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGc                                >  2:6526317/1‑93 (MQ=255)
                                                           tGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCg                               >  2:1147242/1‑93 (MQ=255)
                                                            gTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGa                              <  1:1457281/93‑1 (MQ=255)
                                                             tATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGAc                             <  1:4596880/93‑1 (MQ=255)
                                                             tATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGAc                             <  2:4100396/93‑1 (MQ=255)
                                                             tATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGAc                             <  2:3559273/93‑1 (MQ=255)
                                                             tATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGAc                             >  2:2128611/1‑93 (MQ=255)
                                                               tttGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTCATTATTATTGCGACCg                           >  1:5630322/1‑93 (MQ=255)
                                                                 tggttggCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGcc                         <  1:135799/93‑1 (MQ=255)
                                                                        cATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCaa                  <  2:2568962/93‑1 (MQ=255)
                                                                         aTTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAAt                 >  2:2467485/1‑93 (MQ=255)
                                                                          ttACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAAtt                <  2:2968753/93‑1 (MQ=255)
                                                                          ttACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAAtt                >  2:2728737/1‑93 (MQ=255)
                                                                          ttACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAAtt                >  1:7699774/1‑93 (MQ=255)
                                                                            aCTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTgg              >  1:3148984/1‑93 (MQ=255)
                                                                             cTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGc             <  1:3466818/93‑1 (MQ=255)
                                                                              tGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCCCCACCGCAATTGGCg            >  2:3249421/1‑93 (MQ=255)
                                                                               gCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCgg           <  2:5619974/93‑1 (MQ=255)
                                                                                ccGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCggg          >  1:6129638/1‑92 (MQ=255)
                                                                                ccGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGa          <  1:2049017/93‑1 (MQ=255)
                                                                                 cGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAg         <  1:921108/93‑1 (MQ=255)
                                                                                 cGAAGCAATGACGGGG‑GGAGCTGGCCGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAg         <  1:4838713/93‑1 (MQ=255)
                                                                                  gAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAgg        >  1:2192976/1‑93 (MQ=255)
                                                                                  gAAGCCATGACGGGG‑GGCGCGGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATGATTGCGACCGCCACCGCAATTGGCGGAgg        <  2:3871166/93‑1 (MQ=255)
                                                                                  gAAGCCATGAC‑GGGAGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAgg        <  2:1012333/93‑1 (MQ=255)
                                                                                   aaGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAggg       <  2:1641571/93‑1 (MQ=255)
                                                                                    aGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGt      <  1:702288/93‑1 (MQ=255)
                                                                                      ccATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCa    >  2:7290717/1‑93 (MQ=255)
                                                                                       cATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAg   <  1:6315365/93‑1 (MQ=255)
                                                                                       cATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAg   <  2:7896659/93‑1 (MQ=255)
                                                                                        aTGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGt  >  2:1378293/1‑93 (MQ=255)
                                                                                        aTGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGt  <  1:5969720/93‑1 (MQ=255)
                                                                                        aTGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGt  <  1:3710847/93‑1 (MQ=255)
                                                                                             |                                                                                        
CACAAATCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑GGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGT  >  NC_000913/3816458‑3816637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 246 total aligned reads displayed.
AATCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑GGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTGCGCGATATTC  >  NC_000913/3816462‑3816648
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AATCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑GGG‑GG                                                                                               <  SRR4302543.1061725/94‑1 (MQ=60)
 ATCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑GGG‑GGG                                                                                              <  SRR4302543.4999207/94‑1 (MQ=60)
  TCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑GGG‑GGgc                                                                                             <  SRR4302543.7429744/94‑3 (MQ=60)
  TCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑GGG‑GGgc                                                                                             <  SRR4302543.3748035/94‑3 (MQ=60)
  TCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑GGG‑GGgc                                                                                             <  SRR4302543.3923177/94‑3 (MQ=60)
   CGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑GGG‑GGgcg                                                                                            <  SRR4302543.2758632/94‑4 (MQ=60)
     CTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCT                                                                                           >  SRR4302543.3146403/1‑94 (MQ=60)
     CTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCT                                                                                           >  SRR4302543.7236418/1‑94 (MQ=60)
     CTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCT                                                                                           >  SRR4302543.1385019/1‑94 (MQ=60)
     CTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCT                                                                                           <  SRR4302543.5493404/94‑1 (MQ=60)
      TACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTG                                                                                          >  SRR4302543.6811426/1‑94 (MQ=60)
       ACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGG                                                                                         <  SRR4302543.3145814/94‑1 (MQ=60)
         CCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCG                                                                                       <  SRR4302543.1049264/94‑1 (MQ=60)
          CTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGG                                                                                      >  SRR4302543.7819662/1‑94 (MQ=60)
          CTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGG                                                                                      <  SRR4302543.5562852/94‑1 (MQ=60)
            GCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCC                                                                                    <  SRR4302543.2436853/94‑1 (MQ=60)
             CCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCG                                                                                   <  SRR4302543.2611580/94‑1 (MQ=60)
              CAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGG                                                                                  <  SRR4302543.5524704/94‑1 (MQ=60)
              CAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGG                                                                                  >  SRR4302543.3202344/1‑94 (MQ=60)
              CAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGG                                                                                  >  SRR4302543.2249814/1‑94 (MQ=60)
               AGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGA                                                                                 >  SRR4302543.5871094/1‑94 (MQ=60)
               AGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGA                                                                                 <  SRR4302543.2787665/94‑1 (MQ=60)
                GACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGCAGCCATGACGGGG‑GGCGCTGGCGGCCGGAC                                                                                >  SRR4302543.7438861/1‑94 (MQ=60)
                GACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGAC                                                                                >  SRR4302543.1704155/1‑94 (MQ=60)
                GACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGAC                                                                                <  SRR4302543.5242942/94‑1 (MQ=60)
                GACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGAC                                                                                <  SRR4302543.6946547/94‑1 (MQ=60)
                GACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGAC                                                                                >  SRR4302543.7438862/1‑94 (MQ=60)
                GACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGAC                                                                                <  SRR4302543.7220914/94‑1 (MQ=60)
                GACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGAC                                                                                >  SRR4302543.1331009/1‑94 (MQ=60)
                GACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGAC                                                                                <  SRR4302543.3104793/94‑1 (MQ=60)
                 ACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACG                                                                               <  SRR4302543.6388294/94‑1 (MQ=60)
                 ACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACG                                                                               <  SRR4302543.2085238/94‑1 (MQ=60)
                 ACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACG                                                                               <  SRR4302543.708227/94‑1 (MQ=60)
                 ACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACG                                                                               >  SRR4302543.6605318/1‑94 (MQ=60)
                   AGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGAC                                                                             >  SRR4302543.4519876/1‑94 (MQ=60)
                   AGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGAC                                                                             >  SRR4302543.4393016/1‑94 (MQ=60)
                    GATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACG                                                                            <  SRR4302543.6984731/94‑1 (MQ=60)
                    GATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACG                                                                            <  SRR4302543.5754190/94‑1 (MQ=60)
                    GATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACG                                                                            <  SRR4302543.894173/94‑1 (MQ=60)
                     ATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGG                                                                           >  SRR4302543.1505926/1‑94 (MQ=60)
                     ATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGG                                                                           >  SRR4302543.5766488/1‑94 (MQ=60)
                      TTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGC                                                                          >  SRR4302543.950531/1‑94 (MQ=60)
                      TTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGC                                                                          <  SRR4302543.6276267/94‑1 (MQ=60)
                      TTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGC                                                                          <  SRR4302543.3905442/94‑1 (MQ=60)
                      TTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGC                                                                          >  SRR4302543.7892164/1‑94 (MQ=60)
                       TTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCG                                                                         >  SRR4302543.5414728/1‑94 (MQ=60)
                       TTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCG                                                                         <  SRR4302543.1091228/94‑1 (MQ=60)
                       TTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCG                                                                         >  SRR4302543.1626021/1‑94 (MQ=60)
                          TAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCAT                                                                      <  SRR4302543.264114/94‑1 (MQ=60)
                          TAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCAT                                                                      <  SRR4302543.327166/94‑1 (MQ=60)
                           AGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATG                                                                     >  SRR4302543.288782/1‑94 (MQ=60)
                            GGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGG                                                                    <  SRR4302543.3902092/94‑1 (MQ=60)
                            GGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGG                                                                    <  SRR4302543.4019110/94‑1 (MQ=60)
                            GGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGG                                                                    >  SRR4302543.6386756/1‑94 (MQ=60)
                            GGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGG                                                                    <  SRR4302543.3241781/94‑1 (MQ=60)
                             GGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGA                                                                   <  SRR4302543.6227702/94‑1 (MQ=60)
                              GAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGAT                                                                  <  SRR4302543.3713174/94‑1 (MQ=60)
                              GAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGAT                                                                  <  SRR4302543.6788386/94‑1 (MQ=60)
                              GAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGAT                                                                  <  SRR4302543.6818807/94‑1 (MQ=60)
                              GAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGAT                                                                  <  SRR4302543.2392234/94‑1 (MQ=60)
                              GAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGAT                                                                  <  SRR4302543.7771375/94‑1 (MQ=60)
                               AGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATA                                                                 <  SRR4302543.1376816/94‑1 (MQ=60)
                               AGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATA                                                                 <  SRR4302543.6895087/94‑1 (MQ=60)
                               AGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑GGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATAC                                                                <  SRR4302543.3852271/94‑1 (MQ=60)
                               AGAGAACCATGCTGTTACACATTGTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATA                                                                 <  SRR4302543.6895086/94‑1 (MQ=60)
                                GAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATAC                                                                >  SRR4302543.4597573/1‑94 (MQ=60)
                                GAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATAC                                                                >  SRR4302543.2298870/1‑94 (MQ=60)
                                 AGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACA                                                               >  SRR4302543.7695345/1‑94 (MQ=60)
                                  GAGCCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑GGGTGGCGCTGGCGGCCGGACGACGGCGCATGGATACAT                                                              <  SRR4302543.1265914/94‑1 (MQ=60)
                                  GAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACAT                                                              <  SRR4302543.3664738/94‑1 (MQ=60)
                                  GAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACAT                                                              >  SRR4302543.830570/1‑94 (MQ=60)
                                  GAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACAT                                                              <  SRR4302543.488986/94‑1 (MQ=60)
                                   AACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATT                                                             >  SRR4302543.5339207/1‑94 (MQ=60)
                                   AACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATT                                                             <  SRR4302543.4945076/94‑1 (MQ=60)
                                   AACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATT                                                             >  SRR4302543.2045034/1‑94 (MQ=60)
                                   AACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATT                                                             >  SRR4302543.3241321/1‑94 (MQ=60)
                                    ACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTT                                                            <  SRR4302543.5228324/94‑1 (MQ=60)
                                    ACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTT                                                            >  SRR4302543.2475114/1‑94 (MQ=60)
                                      CATGCTGTTACACATTTTGTATTTGGTTGGCATTCCTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGG                                                          <  SRR4302543.3097854/94‑1 (MQ=60)
                                      CATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGG                                                          <  SRR4302543.4023790/94‑1 (MQ=60)
                                      CATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGG                                                          <  SRR4302543.4023789/94‑1 (MQ=60)
                                      CATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGG                                                          <  SRR4302543.133980/94‑1 (MQ=60)
                                      CATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGG                                                          >  SRR4302543.3302090/1‑94 (MQ=60)
                                      CATGCTGTTACACATTATGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGG                                                          <  SRR4302543.6257254/94‑1 (MQ=60)
                                       ATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGC                                                         >  SRR4302543.6980081/1‑94 (MQ=60)
                                       ATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGC                                                         <  SRR4302543.3790009/94‑1 (MQ=60)
                                       ATGCTGTTACACATTTTGTAGTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGC                                                         <  SRR4302543.908034/94‑1 (MQ=60)
                                        TGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCG                                                        <  SRR4302543.3467889/94‑1 (MQ=60)
                                         GCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGA                                                       >  SRR4302543.4146168/1‑94 (MQ=60)
                                          CTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTA                                                      >  SRR4302543.7827654/1‑94 (MQ=60)
                                          CTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTA                                                      >  SRR4302543.3502757/1‑94 (MQ=60)
                                          CTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTA                                                      >  SRR4302543.3658805/1‑94 (MQ=60)
                                           TGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAA                                                     <  SRR4302543.7625897/94‑1 (MQ=60)
                                            GTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAAT                                                    >  SRR4302543.6540270/1‑94 (MQ=60)
                                             TTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATT                                                   <  SRR4302543.4102535/94‑1 (MQ=60)
                                             TTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATT                                                   >  SRR4302543.3325943/1‑94 (MQ=60)
                                             TTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATT                                                   >  SRR4302543.2280853/1‑94 (MQ=60)
                                             TTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATT                                                   >  SRR4302543.7651678/1‑94 (MQ=60)
                                              TACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTA                                                  <  SRR4302543.6817263/94‑1 (MQ=60)
                                               ACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTAT                                                 >  SRR4302543.6068371/1‑94 (MQ=60)
                                               ACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTAT                                                 <  SRR4302543.5753882/94‑1 (MQ=60)
                                               ACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTAT                                                 <  SRR4302543.7381480/94‑1 (MQ=60)
                                               ACAAATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCGGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTAT                                                 <  SRR4302543.102166/94‑1 (MQ=60)
                                                CACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATT                                                >  SRR4302543.1923265/1‑94 (MQ=60)
                                                 ACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTA                                               >  SRR4302543.7555335/1‑94 (MQ=60)
                                                  GATTTTGTATTTGGTTGGAATTACTGCCGAAGCCATTACTGGG‑CGCGGTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTAT                                              <  SRR4302543.2404077/94‑1 (MQ=60)
                                                  CATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTAT                                              <  SRR4302543.961531/94‑1 (MQ=60)
                                                  CATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTAT                                              >  SRR4302543.6112242/1‑94 (MQ=60)
                                                  CATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTAT                                              <  SRR4302543.2929710/94‑1 (MQ=60)
                                                  CATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTAT                                              >  SRR4302543.3273170/1‑94 (MQ=60)
                                                  CATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTAT                                              <  SRR4302543.2404078/94‑1 (MQ=60)
                                                   ATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATT                                             <  SRR4302543.4870936/94‑1 (MQ=60)
                                                   ATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATT                                             <  SRR4302543.5720396/94‑1 (MQ=60)
                                                   ATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATT                                             >  SRR4302543.193333/1‑94 (MQ=60)
                                                   ATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATT                                             <  SRR4302543.7399025/94‑1 (MQ=60)
                                                    TTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTG                                            <  SRR4302543.3480047/94‑1 (MQ=60)
                                                    TTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTG                                            <  SRR4302543.3480046/94‑1 (MQ=60)
                                                    TTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTG                                            <  SRR4302543.897306/94‑1 (MQ=60)
                                                    TTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTG                                            <  SRR4302543.2844511/94‑1 (MQ=60)
                                                    TTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTG                                            <  SRR4302543.2566149/94‑1 (MQ=60)
                                                     TTTGTATTTGGTTGGCATTACTGCCGAGGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGC                                           <  SRR4302543.3247062/94‑1 (MQ=60)
                                                     TTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGC                                           >  SRR4302543.1396682/1‑94 (MQ=60)
                                                     TTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGC                                           <  SRR4302543.2154512/94‑1 (MQ=60)
                                                     TTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGC                                           <  SRR4302543.5598530/94‑1 (MQ=60)
                                                      TTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCG                                          >  SRR4302543.7877574/1‑94 (MQ=60)
                                                      TTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCG                                          >  SRR4302543.1555779/1‑94 (MQ=60)
                                                        GTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGAC                                        <  SRR4302543.1470432/94‑1 (MQ=60)
                                                         TATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACC                                       <  SRR4302543.1989733/94‑1 (MQ=60)
                                                         TATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACC                                       <  SRR4302543.432933/94‑1 (MQ=60)
                                                         TATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACC                                       <  SRR4302543.3261664/94‑1 (MQ=60)
                                                         TATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACC                                       <  SRR4302543.4638622/94‑1 (MQ=60)
                                                          ATTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTCATTATTATTGCGACCG                                      >  SRR4302543.5681628/1‑94 (MQ=60)
                                                           TTTGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGC                                     >  SRR4302543.2640855/1‑94 (MQ=60)
                                                             TGGTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCA                                   <  SRR4302543.136998/94‑1 (MQ=60)
                                                               GTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACC                                 >  SRR4302543.30163/1‑94 (MQ=60)
                                                               GTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACC                                 <  SRR4302543.4407375/94‑1 (MQ=60)
                                                               GTTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACC                                 <  SRR4302543.4407376/94‑1 (MQ=60)
                                                                TTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCG                                >  SRR4302543.4834832/1‑94 (MQ=60)
                                                                TTGGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGCAATTATTATTGCGACCGCCACCG                                <  SRR4302543.1387736/94‑1 (MQ=60)
                                                                TTGGCATTACTGCCGAAGCCATGAC‑GGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGC                               >  SRR4302543.7669297/1‑94 (MQ=60)
                                                                  GGCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCA                              <  SRR4302543.1185999/94‑1 (MQ=60)
                                                                   GCATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTCGCGTAATTATTATTGCGACCGCTACCGCAT                             >  SRR4302543.338321/1‑94 (MQ=60)
                                                                    CGTTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAAT                            <  SRR4302543.1882337/94‑1 (MQ=60)
                                                                    CATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAAT                            >  SRR4302543.4686437/1‑94 (MQ=60)
                                                                    CATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAAT                            <  SRR4302543.6842218/94‑1 (MQ=60)
                                                                    CATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAAT                            >  SRR4302543.1216571/1‑94 (MQ=60)
                                                                    CATTACTGCCGAAGCCATGACGGGG‑GGCGCGGGCGGCCGGACGACGGCGCATGGATACATTTTGCGCAATTATTAGTGCGACCGCCACCGCAAT                            >  SRR4302543.883387/1‑94 (MQ=60)
                                                                     ATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATT                           >  SRR4302543.5795101/1‑94 (MQ=60)
                                                                     ATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATT                           <  SRR4302543.6910573/94‑1 (MQ=60)
                                                                     ATTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATT                           <  SRR4302543.6910572/94‑1 (MQ=60)
                                                                      TTACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTG                          >  SRR4302543.3501987/1‑94 (MQ=60)
                                                                       TACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGG                         >  SRR4302543.7726018/1‑94 (MQ=60)
                                                                       TACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGG                         <  SRR4302543.461170/94‑1 (MQ=60)
                                                                       TACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGG                         >  SRR4302543.6248062/1‑94 (MQ=60)
                                                                        ACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGC                        <  SRR4302543.2113592/94‑1 (MQ=60)
                                                                        ACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGC                        <  SRR4302543.3243834/94‑1 (MQ=60)
                                                                        ACTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGC                        >  SRR4302543.3318254/1‑94 (MQ=60)
                                                                         CTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCG                       >  SRR4302543.5467307/1‑94 (MQ=60)
                                                                         CTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCG                       <  SRR4302543.7868775/94‑1 (MQ=60)
                                                                         CTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCG                       <  SRR4302543.3497870/94‑1 (MQ=60)
                                                                         CTGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCG                       >  SRR4302543.2641344/1‑94 (MQ=60)
                                                                          TGCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGG                      <  SRR4302543.1814453/94‑1 (MQ=60)
                                                                           GCCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGG                     >  SRR4302543.6187697/1‑94 (MQ=60)
                                                                            CCGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAG                    >  SRR4302543.4489881/1‑94 (MQ=60)
                                                                             CGAAGCCATGACGGGG‑GGCGCTGGCGGCCTGACGATGGGGCATGGTTACATTTGGGGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGG                   >  SRR4302543.5979286/1‑94 (MQ=60)
                                                                             CGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCCTGGGTGCATTTGGCGTAATTATTATTGAGACAGCCACCGCAATTAGCGGAGG                   >  SRR4302543.3739226/1‑94 (MQ=60)
                                                                             CGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGG                   >  SRR4302543.2212674/1‑94 (MQ=60)
                                                                             CGAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGG                   <  SRR4302543.929168/94‑1 (MQ=60)
                                                                             CGAAGCAATGACGGGG‑GGAGCTGGCCGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGG                   <  SRR4302543.4882841/94‑1 (MQ=60)
                                                                              GAAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGG                  <  SRR4302543.6418964/94‑1 (MQ=60)
                                                                               AAGCCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGT                 <  SRR4302543.6412008/94‑1 (MQ=60)
                                                                                 GCCATGAC‑GGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAG              <  SRR4302543.6499080/94‑1 (MQ=60)
                                                                                  NCNTGACNGGG‑GGCGCTGGCGNCNGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAG              <  SRR4302543.5928237/94‑1 (MQ=60)
                                                                                  CCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAG              <  SRR4302543.6193794/94‑1 (MQ=60)
                                                                                  CCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAG              <  SRR4302543.5175298/94‑1 (MQ=60)
                                                                                  CCATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACAATTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAG              >  SRR4302543.4149631/1‑94 (MQ=60)
                                                                                   CATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCTTGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGT             <  SRR4302543.2265775/94‑1 (MQ=60)
                                                                                   CATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGT             >  SRR4302543.7752200/1‑94 (MQ=60)
                                                                                   CATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGT             <  SRR4302543.6374763/94‑1 (MQ=60)
                                                                                   CATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGT             <  SRR4302543.6479092/94‑1 (MQ=60)
                                                                                    ctggggGGG‑GGCGCTGGCGGCGGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTG            <  SRR4302543.2251923/88‑1 (MQ=60)
                                                                                    ATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTG            <  SRR4302543.2396230/94‑1 (MQ=60)
                                                                                    ATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTG            >  SRR4302543.3646776/1‑94 (MQ=60)
                                                                                    ATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTG            <  SRR4302543.3743478/94‑1 (MQ=60)
                                                                                    ATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTG            <  SRR4302543.6024384/94‑1 (MQ=60)
                                                                                    ATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTG            >  SRR4302543.1526971/1‑94 (MQ=60)
                                                                                    ATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTG            >  SRR4302543.5252047/1‑94 (MQ=60)
                                                                                    ATGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTG            >  SRR4302543.4211323/1‑94 (MQ=60)
                                                                                     TGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTGC           >  SRR4302543.7462947/1‑94 (MQ=60)
                                                                                     TGACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTGC           <  SRR4302543.5066626/94‑1 (MQ=60)
                                                                                      GACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTGCG          <  SRR4302543.2664473/94‑1 (MQ=60)
                                                                                      GACGGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTGCG          >  SRR4302543.5854732/1‑94 (MQ=60)
                                                                                       acgGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTGCGC         >  SRR4302543.2931753/4‑94 (MQ=60)
                                                                                       acgGGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTGCGC         <  SRR4302543.2048299/91‑1 (MQ=60)
                                                                                        G‑GGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTGCGCGG       >  SRR4302543.3064104/1‑94 (MQ=60)
                                                                                        G‑GGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTGCGCGA       >  SRR4302543.479353/1‑94 (MQ=60)
                                                                                        G‑GGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCCTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGGCAGTGCGCGA       >  SRR4302543.7372824/1‑94 (MQ=60)
                                                                                            G‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTGCGCGATAT    <  SRR4302543.5239541/94‑1 (MQ=60)
                                                                                              GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTGCGCGATATT   <  SRR4302543.3962900/94‑1 (MQ=60)
                                                                                               GCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTGCGCGATATTC  <  SRR4302543.2848195/94‑1 (MQ=60)
                                                                                               |                                                                                             
AATCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGAC‑GGG‑GGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTGCGCGATATTC  >  NC_000913/3816462‑3816648

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑