Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,841,014 A→G Y161H (TAC→CAC)  yicO ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,841,0140AG99.5% 1333.6 / ‑3.9 421Y161H (TAC→CAC) yicOhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (2/0);  new base G (210/209);  total (212/209)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.01e-01

Only 100 of 428 total aligned reads displayed.

TATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCCC  >  NC_000913/3840924‑3841103
                                                                                          |                                                                                         
tATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGcc                                                                                         >  1:7845740/1‑93 (MQ=255)
   tttttAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGa                                                                                      <  1:5254586/93‑1 (MQ=255)
    ttttAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGAt                                                                                     >  2:5105580/1‑93 (MQ=255)
     tttAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATa                                                                                    <  1:6383414/93‑1 (MQ=255)
       tAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATACAGTGCCGGATACg                                                                                  >  1:5353820/1‑93 (MQ=255)
         aTCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGaa                                                                                >  2:870779/1‑93 (MQ=255)
          tCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGaaa                                                                               <  1:6789808/93‑1 (MQ=255)
          tCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGaaa                                                                               <  1:3883646/93‑1 (MQ=255)
          tCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGaaa                                                                               <  2:5544440/93‑1 (MQ=255)
           cccATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAAc                                                                              >  1:457457/1‑93 (MQ=255)
           cccATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAAc                                                                              <  1:6911805/93‑1 (MQ=255)
           cccATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAAc                                                                              <  1:2935869/93‑1 (MQ=255)
            ccATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACa                                                                             <  2:5881117/93‑1 (MQ=255)
            ccATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACa                                                                             <  2:4543949/93‑1 (MQ=255)
            ccATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACa                                                                             <  1:4260783/93‑1 (MQ=255)
            ccATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACa                                                                             <  1:1653428/93‑1 (MQ=255)
            ccATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACa                                                                             <  1:5058006/93‑1 (MQ=255)
              aTTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGc                                                                           >  1:1015796/1‑93 (MQ=255)
              aTTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGc                                                                           >  1:6211276/1‑93 (MQ=255)
              aTTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGc                                                                           >  1:555935/1‑93 (MQ=255)
              aTTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGc                                                                           >  1:2084861/1‑93 (MQ=255)
              aTTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGc                                                                           <  2:6759998/93‑1 (MQ=255)
              aTTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGc                                                                           <  2:6830881/93‑1 (MQ=255)
               ttAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCg                                                                          <  2:4054613/93‑1 (MQ=255)
               ttAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCg                                                                          <  2:6579600/93‑1 (MQ=255)
               ttAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCg                                                                          >  2:6641680/1‑93 (MQ=255)
               ttAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCg                                                                          >  2:7128810/1‑93 (MQ=255)
                tAAGGCGATAAATAATCTAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGt                                                                         <  2:2383882/93‑1 (MQ=255)
                tAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGt                                                                         >  1:6716792/1‑93 (MQ=255)
                tAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGt                                                                         <  1:1145568/93‑1 (MQ=255)
                 aaGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTg                                                                        >  2:5253512/1‑93 (MQ=255)
                  aGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGa                                                                       >  2:4868692/1‑93 (MQ=255)
                   ggCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAg                                                                      >  2:6386081/1‑93 (MQ=255)
                      gATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaa                                                                   >  2:2905673/1‑93 (MQ=255)
                      gATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaa                                                                   >  2:5352213/1‑93 (MQ=255)
                       ataaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaa                                                                  >  1:7226202/1‑93 (MQ=255)
                       ataaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaa                                                                  <  1:3793875/93‑1 (MQ=255)
                        taaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaaa                                                                 >  1:17803/1‑93 (MQ=255)
                          aataatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAAt                                                               <  2:3943644/93‑1 (MQ=255)
                          aataatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAAt                                                               >  1:7098070/1‑93 (MQ=255)
                           ataatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATa                                                              <  2:3124571/93‑1 (MQ=255)
                           ataatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATa                                                              >  2:2132993/1‑93 (MQ=255)
                            taatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAg                                                             >  1:5867948/1‑93 (MQ=255)
                            taatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAg                                                             <  2:5933661/93‑1 (MQ=255)
                            taatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAg                                                             >  2:7589404/1‑93 (MQ=255)
                             aatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGt                                                            <  1:6496144/93‑1 (MQ=255)
                               tCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTcc                                                          <  1:1271445/93‑1 (MQ=255)
                                ccAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCa                                                         >  2:358945/1‑93 (MQ=255)
                                 cAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCaa                                                        >  1:7156946/1‑93 (MQ=255)
                                 cAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCaa                                                        <  2:5775524/93‑1 (MQ=255)
                                  aaTTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAAc                                                       <  2:1245072/93‑1 (MQ=255)
                                  aaTTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAAc                                                       >  2:543176/1‑93 (MQ=255)
                                   aTTGCGCTGGTGATACCAATACGTAAACGTAAGGGAATGTTGGAGATCATCCAGTGCTGGATACGAAACAGCGTGAGCAAAAATAGTCCAACt                                                      <  1:1363391/93‑1 (MQ=255)
                                   aTTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACt                                                      <  2:7866745/93‑1 (MQ=255)
                                   aTTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACt                                                      <  1:1575030/93‑1 (MQ=255)
                                    ttCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTg                                                     >  2:3840555/1‑93 (MQ=255)
                                    ttCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTg                                                     >  1:5759341/1‑93 (MQ=255)
                                          tGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGcccc                                               <  2:1426790/93‑1 (MQ=255)
                                          tGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGcccc                                               >  1:6618987/1‑93 (MQ=255)
                                          tGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGcccc                                               >  1:3541887/1‑93 (MQ=255)
                                           ggTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCa                                              <  1:3106137/93‑1 (MQ=255)
                                              gATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGaa                                           <  2:3495077/93‑1 (MQ=255)
                                                tACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAata                                         <  1:2695627/93‑1 (MQ=255)
                                                tACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAata                                         >  1:4003267/1‑93 (MQ=255)
                                                tACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAata                                         >  1:3030432/1‑93 (MQ=255)
                                                 aCCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAatat                                        <  1:2515512/93‑1 (MQ=255)
                                                 aCCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAatat                                        <  1:3712581/93‑1 (MQ=255)
                                                  ccAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATAtt                                       >  1:7700551/1‑93 (MQ=255)
                                                   cAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTg                                      <  2:4466680/93‑1 (MQ=255)
                                                      tACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTgcgc                                   <  1:896157/93‑1 (MQ=255)
                                                      tACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTgcgc                                   <  2:1722287/93‑1 (MQ=255)
                                                       aCGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGcc                                  >  2:5027605/1‑93 (MQ=255)
                                                              cTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCg                           >  2:6482386/1‑93 (MQ=255)
                                                              cTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCg                           <  1:441287/93‑1 (MQ=255)
                                                              cTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCg                           <  1:3296095/93‑1 (MQ=255)
                                                               ttAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCgg                          >  2:1106484/1‑93 (MQ=255)
                                                                  aGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCt                       >  2:6281628/1‑93 (MQ=255)
                                                                   gggAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTg                      >  2:2823723/1‑93 (MQ=255)
                                                                    ggAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGc                     <  1:2271201/93‑1 (MQ=255)
                                                                       aTGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAg                  <  1:988269/93‑1 (MQ=255)
                                                                           tGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGgaga              <  1:6027911/93‑1 (MQ=255)
                                                                           tGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGgaga              <  2:2604165/93‑1 (MQ=255)
                                                                           tGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGgaga              <  2:3660815/93‑1 (MQ=255)
                                                                           tGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGgaga              <  1:4481934/93‑1 (MQ=255)
                                                                           tGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGgaga              <  1:5450796/93‑1 (MQ=255)
                                                                            ggAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGgagag             >  2:1874911/1‑92 (MQ=255)
                                                                            ggAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAt             >  2:2692446/1‑93 (MQ=255)
                                                                             gagaTCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATg            <  2:2725936/93‑1 (MQ=255)
                                                                              agaTCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGc           >  1:1523345/1‑93 (MQ=255)
                                                                                 tcatcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCa        <  2:1526691/93‑1 (MQ=255)
                                                                                 tcatcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCa        <  2:4662090/93‑1 (MQ=255)
                                                                                 tcatcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCa        <  1:4135740/93‑1 (MQ=255)
                                                                                 acatcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCa        <  1:7490494/92‑1 (MQ=255)
                                                                                  catcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCAt       >  1:4702847/1‑93 (MQ=255)
                                                                                  catcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCAt       <  1:3364123/93‑1 (MQ=255)
                                                                                   atcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATc      >  1:1978457/1‑93 (MQ=255)
                                                                                   atcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATc      <  2:6184264/93‑1 (MQ=255)
                                                                                    tcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCTGTCTGCCAGGAGATGCCCATCg     >  2:7681216/1‑93 (MQ=255)
                                                                                     ccAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGc    >  2:4318544/1‑93 (MQ=255)
                                                                                       aGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGccc  <  2:729239/93‑1 (MQ=255)
                                                                                          |                                                                                         
TATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCCC  >  NC_000913/3840924‑3841103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 233 total aligned reads displayed.
CAGTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCCCCCAC  >  NC_000913/3840921‑3841107
                                                                                             |                                                                                             
CAGTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTG                                                                                               >  SRR4302543.39548/1‑94 (MQ=60)
CAGTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTG                                                                                               <  SRR4302543.7749647/94‑1 (MQ=60)
CAGTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTG                                                                                               <  SRR4302543.7749648/94‑1 (MQ=60)
CAGTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTG                                                                                               >  SRR4302543.7874725/1‑94 (MQ=60)
 AGTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGC                                                                                              <  SRR4302543.7213886/94‑1 (MQ=60)
 AGTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGC                                                                                              <  SRR4302543.2653754/94‑1 (MQ=60)
 AGTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGC                                                                                              >  SRR4302543.6235682/1‑94 (MQ=60)
  GTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCC                                                                                             >  SRR4302543.3879899/1‑94 (MQ=60)
  GTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCC                                                                                             <  SRR4302543.2131718/94‑1 (MQ=60)
  GTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCC                                                                                             >  SRR4302543.2504736/1‑94 (MQ=60)
  GTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCC                                                                                             >  SRR4302543.7919686/1‑94 (MQ=60)
   TATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCG                                                                                            >  SRR4302543.6924129/1‑94 (MQ=60)
      TTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGAT                                                                                         <  SRR4302543.7863812/94‑1 (MQ=60)
      TTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGAT                                                                                         <  SRR4302543.5580426/94‑1 (MQ=60)
      TTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGAT                                                                                         <  SRR4302543.6068871/94‑1 (MQ=60)
        TTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATAC                                                                                       <  SRR4302543.353322/94‑1 (MQ=60)
        TTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATAC                                                                                       <  SRR4302543.6443492/94‑1 (MQ=60)
        TTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATAC                                                                                       <  SRR4302543.2842294/94‑1 (MQ=60)
         TTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATACAGTGCCGGATACG                                                                                      >  SRR4302543.5402272/1‑94 (MQ=60)
           AATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAA                                                                                    <  SRR4302543.7147919/94‑1 (MQ=60)
             TCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAAC                                                                                  <  SRR4302543.3877218/94‑1 (MQ=60)
             TCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAAC                                                                                  >  SRR4302543.4112254/1‑94 (MQ=60)
             TCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAAC                                                                                  <  SRR4302543.6853926/94‑1 (MQ=60)
             TCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAAC                                                                                  <  SRR4302543.6472222/94‑1 (MQ=60)
             TCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAAC                                                                                  >  SRR4302543.461710/1‑94 (MQ=60)
             TCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAAC                                                                                  <  SRR4302543.3917932/94‑1 (MQ=60)
              CCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACA                                                                                 <  SRR4302543.2962526/94‑1 (MQ=60)
              CCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACA                                                                                 <  SRR4302543.3057921/94‑1 (MQ=60)
              CCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACA                                                                                 <  SRR4302543.6976771/94‑1 (MQ=60)
              CCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACA                                                                                 >  SRR4302543.5510059/1‑94 (MQ=60)
               CCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAG                                                                                <  SRR4302543.6551147/94‑1 (MQ=60)
               CCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAG                                                                                <  SRR4302543.5103978/94‑1 (MQ=60)
               CCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAG                                                                                <  SRR4302543.4299482/94‑1 (MQ=60)
               CCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAG                                                                                <  SRR4302543.1668221/94‑1 (MQ=60)
                CATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGC                                                                               >  SRR4302543.2103473/1‑94 (MQ=60)
                CATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGC                                                                               >  SRR4302543.6269925/1‑94 (MQ=60)
                CATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGC                                                                               >  SRR4302543.1024780/1‑94 (MQ=60)
                CATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGC                                                                               >  SRR4302543.561039/1‑94 (MQ=60)
                 ATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCG                                                                              <  SRR4302543.6886861/94‑1 (MQ=60)
                 ATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCG                                                                              >  SRR4302543.5300828/1‑94 (MQ=60)
                  TTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGT                                                                             <  SRR4302543.4513653/94‑1 (MQ=60)
                   TAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTG                                                                            <  SRR4302543.1156006/94‑1 (MQ=60)
                    AAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGA                                                                           <  SRR4302543.2594378/94‑1 (MQ=60)
                    AAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGA                                                                           >  SRR4302543.2379438/1‑94 (MQ=60)
                    AAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGA                                                                           >  SRR4302543.4148384/1‑94 (MQ=60)
                     AGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAG                                                                          >  SRR4302543.1921582/1‑94 (MQ=60)
                     AGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAG                                                                          >  SRR4302543.1101575/1‑94 (MQ=60)
                     AGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAG                                                                          <  SRR4302543.6026609/94‑1 (MQ=60)
                     AGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAG                                                                          >  SRR4302543.4162501/1‑94 (MQ=60)
                     AGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAG                                                                          <  SRR4302543.2996396/94‑1 (MQ=60)
                      GGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGC                                                                         <  SRR4302543.2086288/94‑1 (MQ=60)
                      GGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGC                                                                         <  SRR4302543.6640002/94‑1 (MQ=60)
                       GCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCA                                                                        >  SRR4302543.4689045/1‑94 (MQ=60)
                         GATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAA                                                                      >  SRR4302543.6262978/1‑94 (MQ=60)
                         GATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAA                                                                      >  SRR4302543.7296214/1‑94 (MQ=60)
                         GATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAA                                                                      >  SRR4302543.2244207/1‑94 (MQ=60)
                          ATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAA                                                                     <  SRR4302543.3827300/94‑1 (MQ=60)
                          ATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAA                                                                     >  SRR4302543.3115989/1‑94 (MQ=60)
                          ATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAA                                                                     >  SRR4302543.17967/1‑94 (MQ=60)
                           TAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAA                                                                    <  SRR4302543.1664681/94‑1 (MQ=60)
                            AAATATTCCAATTCCGCTGGTGATACCAATCCGGAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATCCGAAACAGCGTGAGCAAAAAT                                                                   <  SRR4302543.7693208/94‑1 (MQ=60)
                            AAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAAT                                                                   >  SRR4302543.7166993/1‑94 (MQ=60)
                            AAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTGGGAGATCATCCAGTGCCGGAGACGAAACAGCGTGAGCAAAAAT                                                                   <  SRR4302543.7798614/94‑1 (MQ=60)
                             AATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATA                                                                  >  SRR4302543.4543871/1‑94 (MQ=60)
                              ATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAG                                                                 <  SRR4302543.7739765/94‑1 (MQ=60)
                              ATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAG                                                                 <  SRR4302543.1592512/94‑1 (MQ=60)
                                AATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTC                                                               >  SRR4302543.7210538/1‑94 (MQ=60)
                                AATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTC                                                               >  SRR4302543.7270062/1‑94 (MQ=60)
                                AATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTC                                                               <  SRR4302543.6557339/94‑1 (MQ=60)
                                 ATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCC                                                              <  SRR4302543.5860282/94‑1 (MQ=60)
                                 ATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCC                                                              >  SRR4302543.4856310/1‑94 (MQ=60)
                                 ATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCC                                                              >  SRR4302543.5435713/1‑94 (MQ=60)
                                 ATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCC                                                              >  SRR4302543.1367025/1‑94 (MQ=60)
                                  TCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCA                                                             <  SRR4302543.1282801/94‑1 (MQ=60)
                                  CCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCA                                                             <  SRR4302543.1231351/94‑1 (MQ=60)
                                   CCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAA                                                            >  SRR4302543.7226500/1‑94 (MQ=60)
                                   CCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAA                                                            >  SRR4302543.100115/1‑94 (MQ=60)
                                   CCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAA                                                            >  SRR4302543.7794034/1‑94 (MQ=60)
                                    CAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAAC                                                           >  SRR4302543.1666742/1‑94 (MQ=60)
                                    CAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAAC                                                           >  SRR4302543.6841942/1‑94 (MQ=60)
                                    CAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAAC                                                           <  SRR4302543.1673119/94‑1 (MQ=60)
                                    CAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAAC                                                           <  SRR4302543.1572145/94‑1 (MQ=60)
                                    CAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAAC                                                           <  SRR4302543.5863902/94‑1 (MQ=60)
                                     AATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACT                                                          >  SRR4302543.1495905/1‑94 (MQ=60)
                                     AATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACT                                                          <  SRR4302543.291924/94‑1 (MQ=60)
                                     AATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACT                                                          >  SRR4302543.7030511/1‑94 (MQ=60)
                                      ATTGCGCTGGTGATACCAATACGTAAACGTAAGGGAATGTTGGAGATCATCCAGTGCTGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTG                                                         <  SRR4302543.1375607/94‑1 (MQ=60)
                                      ATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTG                                                         <  SRR4302543.5792199/94‑1 (MQ=60)
                                      ATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTG                                                         >  SRR4302543.5811814/1‑94 (MQ=60)
                                      ATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTG                                                         <  SRR4302543.1589084/94‑1 (MQ=60)
                                       TTCCGCTGGTGATACCAATACGTAAACTTGAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGC                                                        <  SRR4302543.1370364/94‑1 (MQ=60)
                                       TTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGC                                                        <  SRR4302543.945667/94‑1 (MQ=60)
                                       TTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGC                                                        <  SRR4302543.2416603/94‑1 (MQ=60)
                                        TCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCG                                                       <  SRR4302543.3369541/94‑1 (MQ=60)
                                        TCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCG                                                       <  SRR4302543.7002168/94‑1 (MQ=60)
                                        TCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCG                                                       >  SRR4302543.4473176/1‑94 (MQ=60)
                                          CGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCC                                                     >  SRR4302543.3926210/1‑94 (MQ=60)
                                           GCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCC                                                    >  SRR4302543.3004467/1‑94 (MQ=60)
                                            CTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCC                                                   >  SRR4302543.6723584/1‑94 (MQ=60)
                                            CTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCC                                                   >  SRR4302543.6723583/1‑94 (MQ=60)
                                            CTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCC                                                   >  SRR4302543.6681403/1‑94 (MQ=60)
                                            CTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCC                                                   >  SRR4302543.3369891/1‑94 (MQ=60)
                                            CTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCC                                                   >  SRR4302543.3573363/1‑94 (MQ=60)
                                            CTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCC                                                   >  SRR4302543.6352275/1‑94 (MQ=60)
                                            CTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCC                                                   >  SRR4302543.1490271/1‑94 (MQ=60)
                                            CTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCA                                                   >  SRR4302543.1831527/1‑94 (MQ=60)
                                             TGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCA                                                  >  SRR4302543.7249488/1‑94 (MQ=60)
                                             TGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCA                                                  <  SRR4302543.4369139/94‑1 (MQ=60)
                                             TGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCA                                                  <  SRR4302543.6851920/94‑1 (MQ=60)
                                              GGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAG                                                 <  SRR4302543.3134077/94‑1 (MQ=60)
                                                TGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAA                                               >  SRR4302543.2017580/1‑94 (MQ=60)
                                                 GATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAAT                                              <  SRR4302543.914116/94‑1 (MQ=60)
                                                  ATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATA                                             >  SRR4302543.4038987/1‑94 (MQ=60)
                                                  ATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATA                                             >  SRR4302543.3057803/1‑94 (MQ=60)
                                                  ATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATA                                             <  SRR4302543.7376446/94‑1 (MQ=60)
                                                   TACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATAT                                            >  SRR4302543.5774989/1‑94 (MQ=60)
                                                   TACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATAT                                            <  SRR4302543.2720065/94‑1 (MQ=60)
                                                   TACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATAT                                            <  SRR4302543.7480718/94‑1 (MQ=60)
                                                    ACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATT                                           >  SRR4302543.2716225/1‑94 (MQ=60)
                                                    ACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATT                                           <  SRR4302543.3745228/94‑1 (MQ=60)
                                                    ACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATT                                           <  SRR4302543.5513813/94‑1 (MQ=60)
                                                     CCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTG                                          >  SRR4302543.6657191/1‑94 (MQ=60)
                                                     CCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTG                                          >  SRR4302543.5333620/1‑94 (MQ=60)
                                                      CAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGC                                         >  SRR4302543.1069398/1‑94 (MQ=60)
                                                      CAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGC                                         >  SRR4302543.5897993/1‑94 (MQ=60)
                                                      CAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGC                                         <  SRR4302543.6028098/94‑1 (MQ=60)
                                                      CAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGC                                         <  SRR4302543.6028099/94‑1 (MQ=60)
                                                      CAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGC                                         <  SRR4302543.3105131/94‑1 (MQ=60)
                                                      CAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGC                                         <  SRR4302543.6810490/94‑1 (MQ=60)
                                                      CAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGC                                         <  SRR4302543.1850366/94‑1 (MQ=60)
                                                      CAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGC                                         >  SRR4302543.1774654/1‑94 (MQ=60)
                                                      CAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGC                                         >  SRR4302543.4628335/1‑94 (MQ=60)
                                                       AATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCG                                        >  SRR4302543.3565597/1‑94 (MQ=60)
                                                        ATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGC                                       >  SRR4302543.3811253/1‑94 (MQ=60)
                                                        ATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGC                                       >  SRR4302543.6736873/1‑94 (MQ=60)
                                                        ATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGC                                       >  SRR4302543.846593/1‑94 (MQ=60)
                                                         TACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCC                                      <  SRR4302543.904072/94‑1 (MQ=60)
                                                           CGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCA                                    >  SRR4302543.4308222/1‑94 (MQ=60)
                                                           CGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCACAGAATATTGCGCCCA                                    >  SRR4302543.7225547/1‑94 (MQ=60)
                                                            GTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCAT                                   >  SRR4302543.4276713/1‑94 (MQ=60)
                                                            GTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCAT                                   >  SRR4302543.2154584/1‑94 (MQ=60)
                                                            GTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCAT                                   <  SRR4302543.4012517/94‑1 (MQ=60)
                                                            GTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCAT                                   <  SRR4302543.945267/94‑1 (MQ=60)
                                                            GTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTACAACTGCGCCCCAGAATATTGCGCCCAT                                   >  SRR4302543.1168244/1‑94 (MQ=60)
                                                              AAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCC                                 >  SRR4302543.5543640/1‑94 (MQ=60)
                                                               AACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCC                                >  SRR4302543.2392888/1‑94 (MQ=60)
                                                               AACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCC                                <  SRR4302543.4656469/94‑1 (MQ=60)
                                                                ACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCG                               >  SRR4302543.4203491/1‑94 (MQ=60)
                                                                ACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCG                               <  SRR4302543.2655721/94‑1 (MQ=60)
                                                                ACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCG                               <  SRR4302543.5343539/94‑1 (MQ=60)
                                                                 CTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGG                              <  SRR4302543.3493939/94‑1 (MQ=60)
                                                                 CTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGG                              <  SRR4302543.3325830/94‑1 (MQ=60)
                                                                 CTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGG                              <  SRR4302543.445416/94‑1 (MQ=60)
                                                                   TAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTC                            >  SRR4302543.3321211/1‑94 (MQ=60)
                                                                   TAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTC                            <  SRR4302543.6902341/94‑1 (MQ=60)
                                                                    AAGGGAATGTTGTAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCT                           <  SRR4302543.3116490/94‑1 (MQ=60)
                                                                    AAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCT                           <  SRR4302543.3577489/94‑1 (MQ=60)
                                                                     AGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTG                          >  SRR4302543.337387/1‑94 (MQ=60)
                                                                     AGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTG                          >  SRR4302543.3778350/1‑94 (MQ=60)
                                                                     AGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTG                          <  SRR4302543.3951385/94‑1 (MQ=60)
                                                                     AGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGACCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTG                          >  SRR4302543.3778348/1‑94 (MQ=60)
                                                                      GGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGC                         >  SRR4302543.6585123/1‑94 (MQ=60)
                                                                       GGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCC                        <  SRR4302543.2291955/94‑1 (MQ=60)
                                                                         AATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAG                      <  SRR4302543.1471619/94‑1 (MQ=60)
                                                                          ATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGG                     >  SRR4302543.6451816/1‑94 (MQ=60)
                                                                          ATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGG                     >  SRR4302543.6406193/1‑94 (MQ=60)
                                                                          ATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGG                     <  SRR4302543.4532334/94‑1 (MQ=60)
                                                                             TTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGA                  <  SRR4302543.878546/94‑1 (MQ=60)
                                                                              TTGAGATCCTCCAGTGCCGGAGACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCAGCCCGGTCTGCCAGGAGAT                 <  SRR4302543.6084262/94‑1 (MQ=60)
                                                                              TGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAT                 <  SRR4302543.6084151/94‑1 (MQ=60)
                                                                              TGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAT                 <  SRR4302543.1113651/94‑1 (MQ=60)
                                                                              TGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAT                 <  SRR4302543.4342605/94‑1 (MQ=60)
                                                                              TGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAT                 <  SRR4302543.4992260/94‑1 (MQ=60)
                                                                              TGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAT                 <  SRR4302543.4522634/94‑1 (MQ=60)
                                                                              TGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAT                 <  SRR4302543.4522635/94‑1 (MQ=60)
                                                                              TGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAT                 <  SRR4302543.3410835/94‑1 (MQ=60)
                                                                              TGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAT                 <  SRR4302543.5405593/94‑1 (MQ=60)
                                                                              TGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAT                 <  SRR4302543.5500235/94‑1 (MQ=60)
                                                                               GGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATG                <  SRR4302543.1973480/94‑1 (MQ=60)
                                                                               GGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATG                >  SRR4302543.7608/1‑94 (MQ=60)
                                                                               GGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATG                >  SRR4302543.7921032/1‑94 (MQ=60)
                                                                                GAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGC               >  SRR4302543.1537019/1‑94 (MQ=60)
                                                                                 AGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCC              <  SRR4302543.131731/94‑1 (MQ=60)
                                                                                  GATCATCCAGTGCCGGACACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCC             <  SRR4302543.1545055/94‑1 (MQ=60)
                                                                                   ATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCA            >  SRR4302543.7493137/1‑94 (MQ=60)
                                                                                   ATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCA            >  SRR4302543.2038868/1‑94 (MQ=60)
                                                                                   ATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCA            >  SRR4302543.4937052/1‑94 (MQ=60)
                                                                                    TCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCAT           <  SRR4302543.4173068/94‑1 (MQ=60)
                                                                                    TCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCAT           >  SRR4302543.4745811/1‑94 (MQ=60)
                                                                                    TCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCAT           >  SRR4302543.5131708/1‑94 (MQ=60)
                                                                                    ACATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCAT           <  SRR4302543.7562160/94‑1 (MQ=60)
                                                                                     CATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATC          <  SRR4302543.5257816/94‑1 (MQ=60)
                                                                                      ATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGGTGCCCATCG         >  SRR4302543.3229195/1‑94 (MQ=60)
                                                                                      ATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG         >  SRR4302543.6291954/1‑94 (MQ=60)
                                                                                      ATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCC         >  SRR4302543.5327225/1‑94 (MQ=60)
                                                                                         CAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGAGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCCC      >  SRR4302543.3727280/1‑94 (MQ=60)
                                                                                          AGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCCCC     >  SRR4302543.7351780/1‑94 (MQ=60)
                                                                                            TGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCCCCCA   >  SRR4302543.7350868/1‑94 (MQ=60)
                                                                                             GCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCCCCCAC  <  SRR4302543.2915186/94‑1 (MQ=60)
                                                                                             GCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCCCCCAC  <  SRR4302543.2915185/94‑1 (MQ=60)
                                                                                             |                                                                                             
CAGTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCCCCCAC  >  NC_000913/3840921‑3841107

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: