Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,841,014 |
A→G |
Y161H (TAC→CAC) |
yicO ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,841,014 | 0 | A | G | 100.0%
| 758.9
/ NA
| 238 | Y161H (TAC→CAC) | yicO | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (130/108); total (130/108) |
Only 100 of 242 total aligned reads displayed.
TATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCC > NC_000913/3840924‑3841102
|
tATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGcc < 2:1907387/93‑1 (MQ=255)
tATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGATGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGcc > 1:2157088/1‑93 (MQ=255)
aTTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCg > 1:3438288/1‑93 (MQ=255)
tttttAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGa < 2:4380401/93‑1 (MQ=255)
ttttAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGAt < 1:3997053/93‑1 (MQ=255)
tttAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATa < 1:1338633/93‑1 (MQ=255)
aTCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGaa < 1:4424718/93‑1 (MQ=255)
aTCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGaa > 1:2905772/1‑93 (MQ=255)
tCCCATTAAGGCGATAAATAATCCAATTCCGCCGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGaaa > 2:2579346/1‑93 (MQ=255)
cccATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAAc > 1:730041/1‑93 (MQ=255)
cATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAagag > 1:2995536/1‑93 (MQ=255)
ttAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCg > 1:513577/1‑93 (MQ=255)
tAAGGCGATAAATAATCCAATTCCGCTGTTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGt < 2:3795393/93‑1 (MQ=255)
tAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGt < 2:3568091/93‑1 (MQ=255)
aaGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTg < 2:4121527/93‑1 (MQ=255)
aaGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTg < 1:3562012/93‑1 (MQ=255)
aGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGa > 1:4219680/1‑93 (MQ=255)
aGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGa < 1:2866644/93‑1 (MQ=255)
ggCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAg > 2:3839429/1‑93 (MQ=255)
gATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaa < 1:3648372/93‑1 (MQ=255)
taaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaaa > 1:2689465/1‑93 (MQ=255)
taaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaaa > 1:137240/1‑93 (MQ=255)
aaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaaaa < 1:2469133/93‑1 (MQ=255)
aaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaaaa < 1:1674911/93‑1 (MQ=255)
aaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaaaa > 2:4652878/1‑93 (MQ=255)
aaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaaaa < 2:1493797/93‑1 (MQ=255)
aaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaaaa > 2:2772801/1‑93 (MQ=255)
aataatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAAt > 1:2333856/1‑93 (MQ=255)
aataatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAAt < 1:1282292/93‑1 (MQ=255)
ataatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATa > 1:4458760/1‑93 (MQ=255)
taatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAg < 1:4178218/93‑1 (MQ=255)
aatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAgc > 1:3581931/1‑92 (MQ=255)
atCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTc < 2:2454568/93‑1 (MQ=255)
atCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTc > 2:4230730/1‑93 (MQ=255)
atCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTc < 1:2670221/93‑1 (MQ=255)
tCCAATTCCGCTGGTGATACTAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTca > 1:4103688/1‑92 (MQ=255)
tCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTcc > 1:3234467/1‑93 (MQ=255)
tCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTcc > 1:712943/1‑93 (MQ=255)
ccAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGCTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAACTAGTCCa > 2:3127434/1‑93 (MQ=255)
cAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCaa > 1:909355/1‑93 (MQ=255)
aaTTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAAc < 2:3088944/93‑1 (MQ=255)
aaTTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAAc < 2:707735/93‑1 (MQ=255)
aaTTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAAc > 1:1570744/1‑93 (MQ=255)
aTTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACt > 2:267557/1‑93 (MQ=255)
ttCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTg > 2:1643653/1‑93 (MQ=255)
tCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTgc > 2:4667119/1‑93 (MQ=255)
tCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTgc < 1:1761718/93‑1 (MQ=255)
cTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGccc > 2:1026321/1‑93 (MQ=255)
gTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAg > 2:2519902/1‑93 (MQ=255)
aTACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAat > 1:2808604/1‑93 (MQ=255)
aTACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAat < 1:757310/93‑1 (MQ=255)
tACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAata > 2:367991/1‑93 (MQ=255)
tACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAata < 1:616406/93‑1 (MQ=255)
tACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAata > 2:139380/1‑93 (MQ=255)
aCCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAatat < 2:2622765/93‑1 (MQ=255)
aCCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAatat < 2:1204191/93‑1 (MQ=255)
ccAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATAtt > 2:77018/1‑93 (MQ=255)
ccAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATAtt < 2:3209010/93‑1 (MQ=255)
ccAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATAtt < 2:2083093/93‑1 (MQ=255)
cAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTg > 1:3825420/1‑93 (MQ=255)
cAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTg < 1:143522/93‑1 (MQ=255)
cAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTg > 1:4266297/1‑93 (MQ=255)
aaTACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTgc > 1:4659289/1‑93 (MQ=255)
aTACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTgcg > 1:2293742/1‑93 (MQ=255)
tACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTgcgc > 1:2097177/1‑93 (MQ=255)
gTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCa > 1:1107428/1‑93 (MQ=255)
aaCTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATcc < 2:1552953/93‑1 (MQ=255)
aaCTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATcc > 1:2223534/1‑93 (MQ=255)
aaCTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATcc > 1:4107576/1‑93 (MQ=255)
aCTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATccc < 1:1328993/93‑1 (MQ=255)
ttAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCgg > 2:4180980/1‑93 (MQ=255)
tAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGt > 2:845981/1‑93 (MQ=255)
tAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGt > 2:2994603/1‑93 (MQ=255)
taGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTc < 2:1513589/92‑1 (MQ=255)
aaGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTc < 1:2944980/93‑1 (MQ=255)
aGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCt > 2:1336164/1‑93 (MQ=255)
aGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGACt > 1:213122/1‑93 (MQ=255)
gggAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTg > 1:84829/1‑93 (MQ=255)
ggAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGc < 2:2849859/93‑1 (MQ=255)
ggAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGc > 2:3268608/1‑93 (MQ=255)
aTGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAg < 2:3626066/93‑1 (MQ=255)
tGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAgg > 1:1188091/1‑93 (MQ=255)
tGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAgg > 1:3122454/1‑93 (MQ=255)
ttGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGgag > 2:311255/1‑93 (MQ=255)
ttGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGgag < 1:2446889/93‑1 (MQ=255)
tGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGgaga < 1:104404/93‑1 (MQ=255)
tGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGgaga < 1:1785017/93‑1 (MQ=255)
tGGAGATCATCCAGTGCCGGATACGAAACAGCGGGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGgaga < 2:1974167/93‑1 (MQ=255)
ggAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAt < 1:3107206/93‑1 (MQ=255)
ggAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAt > 2:4308211/1‑93 (MQ=255)
gagaTCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATg > 1:3401973/1‑93 (MQ=255)
gagaTCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATg > 1:3535481/1‑93 (MQ=255)
gaTCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGcc > 2:3540893/1‑93 (MQ=255)
gaTCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGcc < 1:1876396/93‑1 (MQ=255)
atcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATc < 2:1608660/93‑1 (MQ=255)
atcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATc < 1:459623/93‑1 (MQ=255)
tcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCg > 2:65022/1‑93 (MQ=255)
tcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCg > 1:1113138/1‑93 (MQ=255)
cAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGcc > 1:3903613/1‑93 (MQ=255)
cAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGcc > 1:4483211/1‑93 (MQ=255)
|
TATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCC > NC_000913/3840924‑3841102
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCCCCCA > NC_000913/3840922‑3841106
|
AGTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGC > SRR4302535.3268170/1‑94 (MQ=60)
AGTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGC > SRR4302535.408540/1‑94 (MQ=60)
GTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCC < SRR4302535.2508926/94‑1 (MQ=60)
GTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGATGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCC > SRR4302535.2172585/1‑94 (MQ=60)
TATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCG > SRR4302535.3462201/1‑94 (MQ=60)
TTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGA < SRR4302535.4559893/94‑1 (MQ=60)
TTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATA < SRR4302535.4024399/94‑1 (MQ=60)
TTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATAC < SRR4302535.1348185/94‑1 (MQ=60)
TTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACG < SRR4302535.4509121/94‑1 (MQ=60)
AATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAA > SRR4302535.2926312/1‑94 (MQ=60)
AATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAA > SRR4302535.2899914/1‑94 (MQ=60)
ATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAA < SRR4302535.4455024/94‑1 (MQ=60)
TCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAAC < SRR4302535.3473613/94‑1 (MQ=60)
TCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAAC > SRR4302535.2831099/1‑94 (MQ=60)
TCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAAC > SRR4302535.735167/1‑94 (MQ=60)
CCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACA > SRR4302535.2232350/1‑94 (MQ=60)
CCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACA > SRR4302535.1775597/1‑94 (MQ=60)
CCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAAGAG > SRR4302535.3016534/1‑94 (MQ=60)
CCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAG < SRR4302535.1859758/94‑1 (MQ=60)
CCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAG > SRR4302535.1513178/1‑94 (MQ=60)
CATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGC > SRR4302535.313820/1‑94 (MQ=60)
CATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGC < SRR4302535.2333828/94‑1 (MQ=60)
CATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGC > SRR4302535.2469378/1‑94 (MQ=60)
ATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCG > SRR4302535.4510628/1‑94 (MQ=60)
ATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCG > SRR4302535.3913631/1‑94 (MQ=60)
ATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCG > SRR4302535.517166/1‑94 (MQ=60)
ATTAAGGCGATAAATAATCCAATTCCGCTGGTAATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCG < SRR4302535.2949045/94‑1 (MQ=60)
TTAAGGCGATAAATAATCCAGTTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGT < SRR4302535.3863582/94‑1 (MQ=60)
AAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGA > SRR4302535.4248552/1‑94 (MQ=60)
AAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGA < SRR4302535.3586712/94‑1 (MQ=60)
AGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAG > SRR4302535.2740803/1‑94 (MQ=60)
AGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAG < SRR4302535.2886949/94‑1 (MQ=60)
AGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAG < SRR4302535.1778046/94‑1 (MQ=60)
AGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAG < SRR4302535.4231654/94‑1 (MQ=60)
AGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAG < SRR4302535.4131828/94‑1 (MQ=60)
GCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCA < SRR4302535.1593524/94‑1 (MQ=60)
CGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAA > SRR4302535.1601214/1‑94 (MQ=60)
GATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAA < SRR4302535.3673632/94‑1 (MQ=60)
GATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAA > SRR4302535.941912/1‑94 (MQ=60)
ATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAA > SRR4302535.138203/1‑94 (MQ=60)
ATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAA > SRR4302535.2708685/1‑94 (MQ=60)
TAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAA < SRR4302535.3489430/94‑1 (MQ=60)
AAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAAT < SRR4302535.75041/94‑1 (MQ=60)
AAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAAT < SRR4302535.654236/94‑1 (MQ=60)
AAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAAT > SRR4302535.2350557/1‑94 (MQ=60)
AAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAAT < SRR4302535.1687038/94‑1 (MQ=60)
AAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAAT < SRR4302535.2486935/94‑1 (MQ=60)
AATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATA > SRR4302535.4489340/1‑94 (MQ=60)
AATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATA < SRR4302535.1291440/94‑1 (MQ=60)
ATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAG < SRR4302535.2708092/94‑1 (MQ=60)
TAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGT < SRR4302535.4206819/94‑1 (MQ=60)
TAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGT > SRR4302535.635856/1‑94 (MQ=60)
TAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGC > SRR4302535.3606775/1‑94 (MQ=60)
AATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTC > SRR4302535.3588527/1‑94 (MQ=60)
ATCCAATTCCGCTGGTGATACTAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCA > SRR4302535.4131782/1‑94 (MQ=60)
ATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCC < SRR4302535.2689327/94‑1 (MQ=60)
ATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCC > SRR4302535.4033770/1‑94 (MQ=60)
ATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCC > SRR4302535.3256912/1‑94 (MQ=60)
ATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCC > SRR4302535.717948/1‑94 (MQ=60)
ATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCA > SRR4302535.3589779/1‑94 (MQ=60)
CCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAA > SRR4302535.915814/1‑94 (MQ=60)
CAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAAC > SRR4302535.1582083/1‑94 (MQ=60)
AATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACT < SRR4302535.2498362/94‑1 (MQ=60)
AATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACT < SRR4302535.3184818/94‑1 (MQ=60)
AATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACT < SRR4302535.4202530/94‑1 (MQ=60)
AATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACT < SRR4302535.1412641/94‑1 (MQ=60)
AATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACT < SRR4302535.1390450/94‑1 (MQ=60)
ATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTG > SRR4302535.3335497/1‑94 (MQ=60)
TCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCG < SRR4302535.1774478/94‑1 (MQ=60)
TCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCG < SRR4302535.3622079/94‑1 (MQ=60)
CCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGC > SRR4302535.606447/1‑94 (MQ=60)
CGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCC < SRR4302535.4708900/94‑1 (MQ=60)
CTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCC > SRR4302535.1115966/1‑94 (MQ=60)
CTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCC > SRR4302535.1177537/1‑94 (MQ=60)
GTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGA < SRR4302535.3051403/94‑1 (MQ=60)
GATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAAT > SRR4302535.2828572/1‑94 (MQ=60)
ATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATA < SRR4302535.762639/94‑1 (MQ=60)
TACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATAT < SRR4302535.620691/94‑1 (MQ=60)
CCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTG > SRR4302535.3851810/1‑94 (MQ=60)
CCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTG > SRR4302535.4295509/1‑94 (MQ=60)
CCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTG > SRR4302535.727301/1‑94 (MQ=60)
CAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGC < SRR4302535.144521/94‑1 (MQ=60)
CAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGC > SRR4302535.4486000/1‑94 (MQ=60)
CAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGC > SRR4302535.4690805/1‑94 (MQ=60)
AATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCG > SRR4302535.4197104/1‑94 (MQ=60)
AATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCG > SRR4302535.2310149/1‑94 (MQ=60)
AATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCG < SRR4302535.1342744/94‑1 (MQ=60)
AATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCG < SRR4302535.4391335/94‑1 (MQ=60)
ATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGC > SRR4302535.2112301/1‑94 (MQ=60)
TACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCC > SRR4302535.4253992/1‑94 (MQ=60)
ACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCC < SRR4302535.3793567/94‑1 (MQ=60)
ACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCC < SRR4302535.2211614/94‑1 (MQ=60)
CGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCA > SRR4302535.4645491/1‑94 (MQ=60)
CGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCA > SRR4302535.1115337/1‑94 (MQ=60)
CGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCACCCA > SRR4302535.2991270/1‑94 (MQ=60)
GTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCAT > SRR4302535.4052003/1‑94 (MQ=60)
GTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCAT > SRR4302535.276016/1‑94 (MQ=60)
GTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCACAT > SRR4302535.3099759/1‑94 (MQ=60)
AAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAagtcaacttccgcccaagatattgccgcccacc > SRR4302535.1056370/1‑61 (MQ=60)
AAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCC > SRR4302535.2239361/1‑94 (MQ=60)
AAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCC > SRR4302535.4135702/1‑94 (MQ=60)
AACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCC < SRR4302535.892294/94‑1 (MQ=60)
ACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCG > SRR4302535.1964883/1‑94 (MQ=60)
ACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCG < SRR4302535.2251033/94‑1 (MQ=60)
ACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCG < SRR4302535.1338474/94‑1 (MQ=60)
ACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCG < SRR4302535.1338473/94‑1 (MQ=60)
CTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGG > SRR4302535.4631532/1‑94 (MQ=60)
TAAGGGAATGTTGGAGATCACCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCGAACAGCGCCCCAGAATATTGCGCCCATCCCGcgc > SRR4302535.243806/1‑91 (MQ=60)
AAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCT < SRR4302535.2626363/94‑1 (MQ=60)
AAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCT < SRR4302535.2965678/94‑1 (MQ=60)
AAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGACT > SRR4302535.214585/1‑94 (MQ=60)
AGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTG > SRR4302535.85426/1‑94 (MQ=60)
GGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGC > SRR4302535.3125695/1‑94 (MQ=60)
GGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCC < SRR4302535.840711/94‑1 (MQ=60)
GAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCA < SRR4302535.3427540/94‑1 (MQ=60)
AATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAG < SRR4302535.1730050/94‑1 (MQ=60)
ATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGG > SRR4302535.2950041/1‑94 (MQ=60)
ATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGG > SRR4302535.3144200/1‑94 (MQ=60)
ATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGG > SRR4302535.13115/1‑94 (MQ=60)
ATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGG > SRR4302535.1196597/1‑94 (MQ=60)
TGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGA < SRR4302535.2135361/94‑1 (MQ=60)
TTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGA < SRR4302535.2464512/94‑1 (MQ=60)
TTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGA > SRR4302535.1370673/1‑94 (MQ=60)
TGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAT < SRR4302535.105148/94‑1 (MQ=60)
TGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAT < SRR4302535.1797936/94‑1 (MQ=60)
TGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAT < SRR4302535.1182724/94‑1 (MQ=60)
TGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAT < SRR4302535.2143172/94‑1 (MQ=60)
GGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATG < SRR4302535.3128840/94‑1 (MQ=60)
GGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATG > SRR4302535.3425650/1‑94 (MQ=60)
GGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATG > SRR4302535.747287/1‑94 (MQ=60)
GGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATG > SRR4302535.3560024/1‑94 (MQ=60)
GAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGC < SRR4302535.2378840/94‑1 (MQ=60)
AGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCC > SRR4302535.3208841/1‑94 (MQ=60)
AGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCC > SRR4302535.3579006/1‑94 (MQ=60)
GATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCC < SRR4302535.1889908/94‑1 (MQ=60)
ATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCA > SRR4302535.3931303/1‑94 (MQ=60)
CATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGACGCCCATC > SRR4302535.2156546/1‑94 (MQ=60)
ATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG < SRR4302535.462835/94‑1 (MQ=60)
ATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG > SRR4302535.1121076/1‑94 (MQ=60)
ATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCG < SRR4302535.1289868/94‑1 (MQ=60)
CCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCC > SRR4302535.4513979/1‑94 (MQ=60)
CCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCC > SRR4302535.4364885/1‑94 (MQ=60)
CCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCC > SRR4302535.3930353/1‑94 (MQ=60)
GTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCCCCC > SRR4302535.127067/1‑94 (MQ=60)
TGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCCCCCA > SRR4302535.4481845/1‑94 (MQ=60)
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AGTATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCCCCCA > NC_000913/3840922‑3841106
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
