Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,874,579	A→G	M1T (ATG→ACG) †	yidA ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,874,579	0	A	G	99.7%	1194.5 / NA	372	M1T (ATG→ACG) †	yidA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (164/207); minor base T (1/0); total (165/207)
Fisher's exact test for biased strand distribution p-value = 4.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 387 total aligned reads displayed.

GCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGC  >  NC_000913/3874489‑3874667

tcGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTg                                                                                        <  2:3675597/92‑1 (MQ=255)

 cGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGa                                                                                       <  2:3990840/93‑1 (MQ=255)

  gggaaTCGCATTTTTAACGGGGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAg                                                                                      <  1:1678859/90‑1 (MQ=255)

   gCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGt                                                                                     <  1:6811505/93‑1 (MQ=255)

       tCGCATTTTTAACGGCGGGGGAAAAGGGGTGATCGGGGAGCAGAAGGGGGCCATCCATATCGATAGCAATGAGGTTAATAGCCGTGGGGTccc                                                                                 >  2:2600067/1‑93 (MQ=255)

        cGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTcccc                                                                                <  2:150685/93‑1 (MQ=255)

          cATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAg                                                                              <  1:1966627/93‑1 (MQ=255)

           aTTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAgg                                                                             <  1:4843176/93‑1 (MQ=255)

             ttttAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTa                                                                           <  2:5904074/93‑1 (MQ=255)

              tttAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAg                                                                          <  1:7355540/93‑1 (MQ=255)

               ttAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGa                                                                         <  1:3155690/93‑1 (MQ=255)

                tAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGAt                                                                        <  1:650711/93‑1 (MQ=255)

                 aaCGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGAtt                                                                       <  2:4158389/93‑1 (MQ=255)

                 aaCGGCGGGGGAAATGGTGTGATCGGGCAGCAGAAGGGGGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGGTCCCCAGGGAGAtt                                                                       >  2:6648043/1‑93 (MQ=255)

                       gggTGAAATGGTGTGATCGGTCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTcc                                                                 <  1:4188205/93‑1 (MQ=255)

                       gggTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTcc                                                                 >  1:7789378/1‑93 (MQ=255)

                       gggTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTcc                                                                 <  2:850191/93‑1 (MQ=255)

                        ggTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCt                                                                <  1:6684915/93‑1 (MQ=255)

                             aaTGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGAccc                                                           >  2:4823868/1‑93 (MQ=255)

                               tGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAt                                                         <  2:4888717/93‑1 (MQ=255)

                                ggTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATg                                                        >  1:1047147/1‑93 (MQ=255)

                                 gtgtGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGc                                                       >  2:4197455/1‑93 (MQ=255)

                                 gtgtGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGAGTGGTTCCTGACCCATGc                                                       >  1:7038521/1‑93 (MQ=255)

                                  tgtgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCt                                                      >  1:4547026/1‑93 (MQ=255)

                                    tgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTaa                                                    <  1:4387198/93‑1 (MQ=255)

                                    tgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTaa                                                    >  1:4639605/1‑93 (MQ=255)

                                    tgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTaa                                                    <  2:5243406/93‑1 (MQ=255)

                                    tgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTaa                                                    >  1:760940/1‑93 (MQ=255)

                                    tgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTaa                                                    <  2:6311963/93‑1 (MQ=255)

                                     gATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAc                                                   >  1:2922802/1‑93 (MQ=255)

                                      aTCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAcg                                                  >  1:5898111/1‑93 (MQ=255)

                                          ggCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGAt                                              <  2:3809836/93‑1 (MQ=255)

                                          ggCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGAt                                              >  2:175003/1‑93 (MQ=255)

                                           gcagcaGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGAtt                                             <  1:5666259/93‑1 (MQ=255)

                                             agcagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTcc                                           <  2:5279203/93‑1 (MQ=255)

                                             agcagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTcc                                           >  2:3302948/1‑93 (MQ=255)

                                             agcagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTcc                                           <  1:5035669/93‑1 (MQ=255)

                                               cagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGc                                         <  2:301569/93‑1 (MQ=255)

                                                 gAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTc                                       >  2:4371809/1‑93 (MQ=255)

                                                 gAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTc                                       <  2:7171849/93‑1 (MQ=255)

                                                   aGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCaa                                     >  2:5397560/1‑93 (MQ=255)

                                                      gTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGCTTCCGCTCaaaaa                                  <  1:5225765/93‑1 (MQ=255)

                                                       tGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGATCCTGACCCATGCTAACGCGATTCCGCTCAAAAAt                                 >  1:5488005/1‑93 (MQ=255)

                                                        gCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAAta                                >  1:4126755/1‑92 (MQ=255)

                                                        gCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATc                                <  2:6457896/93‑1 (MQ=255)

                                                        gCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATc                                <  1:3553370/93‑1 (MQ=255)

                                                        gCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATc                                >  1:5628328/1‑93 (MQ=255)

                                                        gCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATc                                <  2:2809007/93‑1 (MQ=255)

                                                         ccatccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCa                               >  1:3920467/1‑93 (MQ=255)

                                                          catccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAg                              <  2:7845443/93‑1 (MQ=255)

                                                          catccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAg                              <  1:1102299/93‑1 (MQ=255)

                                                          catccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAg                              <  2:1662092/93‑1 (MQ=255)

                                                           atccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGt                             >  1:7229955/1‑93 (MQ=255)

                                                            tccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTa                            <  1:1237596/93‑1 (MQ=255)

                                                            tccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTa                            >  1:3755201/1‑93 (MQ=255)

                                                            tccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTa                            >  1:2307447/1‑93 (MQ=255)

                                                            tccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTa                            >  1:828323/1‑93 (MQ=255)

                                                             ccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTac                           <  2:2441976/93‑1 (MQ=255)

                                                              catATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTaca                          >  1:5791417/1‑93 (MQ=255)

                                                              catATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTaca                          >  2:1180708/1‑93 (MQ=255)

                                                              catATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTaca                          >  1:1028329/1‑93 (MQ=255)

                                                                tatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaac                        >  1:268628/1‑93 (MQ=255)

                                                                tatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaac                        <  1:1397049/93‑1 (MQ=255)

                                                                 atCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaaca                       >  2:458364/1‑93 (MQ=255)

                                                                 atCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaaca                       <  1:6041259/93‑1 (MQ=255)

                                                                  tCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAacac                      >  1:6372894/1‑93 (MQ=255)

                                                                  tCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAacac                      >  2:764558/1‑93 (MQ=255)

                                                                   cGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAcc                     >  1:2362354/1‑93 (MQ=255)

                                                                    gATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAccc                    >  1:4735068/1‑93 (MQ=255)

                                                                     aTAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCg                   >  2:5718683/1‑93 (MQ=255)

                                                                      tAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGa                  >  2:1258532/1‑93 (MQ=255)

                                                                      tAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGa                  >  2:3072986/1‑93 (MQ=255)

                                                                      tAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGa                  >  2:7380998/1‑93 (MQ=255)

                                                                      tAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGa                  <  2:7749638/93‑1 (MQ=255)

                                                                      tAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGa                  >  1:3224597/1‑93 (MQ=255)

                                                                      tAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGa                  >  1:5354090/1‑93 (MQ=255)

                                                                        gCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAgg                <  2:1906939/93‑1 (MQ=255)

                                                                        gCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAgg                <  2:1084832/93‑1 (MQ=255)

                                                                        gCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAgg                >  1:997512/1‑93 (MQ=255)

                                                                        gCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAgg                >  2:5826312/1‑93 (MQ=255)

                                                                         cAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAggg               >  2:7515479/1‑93 (MQ=255)

                                                                          aaTGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGa              >  1:2493561/1‑93 (MQ=255)

                                                                          aaTGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGa              >  2:2197513/1‑93 (MQ=255)

                                                                           aTGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGaa             >  2:3546192/1‑93 (MQ=255)

                                                                           aTGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGaa             >  2:6834349/1‑93 (MQ=255)

                                                                            tGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGaaa            >  2:6134784/1‑93 (MQ=255)

                                                                            tGAGTTTAATAGCCGTGAGTTCCCCAGGGAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGaaa            <  1:4011831/93‑1 (MQ=255)

                                                                             gAGTTTAATAGCCGTGAGTTCCCGAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGaaaa           <  2:5636573/93‑1 (MQ=255)

                                                                             gAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGaaaa           <  2:5555033/93‑1 (MQ=255)

                                                                             gAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGaaaa           <  2:6759325/93‑1 (MQ=255)

                                                                             gAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGaaaa           <  1:6970870/93‑1 (MQ=255)

                                                                               gTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgg         >  2:6576138/1‑93 (MQ=255)

                                                                                tttAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAggg        >  1:2161160/1‑93 (MQ=255)

                                                                                tttAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAggg        <  2:3618232/93‑1 (MQ=255)

                                                                                  tAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAggggg      >  1:2047250/1‑93 (MQ=255)

                                                                                  tAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAggggg      >  1:7549026/1‑93 (MQ=255)

                                                                                  tAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAggggg      <  1:5548125/93‑1 (MQ=255)

                                                                                   aaTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgggggg     <  2:2305376/93‑2 (MQ=255)

                                                                                   aaTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgggggg     <  1:2754888/93‑2 (MQ=255)

                                                                                    aTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgggggga    <  1:7654356/93‑3 (MQ=255)

GCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGC  >  NC_000913/3874489‑3874667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 214 total aligned reads displayed.

TGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GG‑GGGATGCAACG  >  NC_000913/3874488‑3874671

TGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTG                                                                                              <  SRR4302543.2786439/94‑1 (MQ=60)

 GCGGCCATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGA                                                                                             <  SRR4302543.2746260/94‑1 (MQ=60)

   GGGAATCGCATTTTTAACGGGGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGT                                                                                           <  SRR4302543.1693910/94‑1 (MQ=60)

    GCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTT                                                                                          <  SRR4302543.6657357/94‑1 (MQ=60)

    GCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTT                                                                                          <  SRR4302543.6876070/94‑1 (MQ=60)

    GCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTT                                                                                          <  SRR4302543.6875816/94‑1 (MQ=60)

       ATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCC                                                                                       <  SRR4302543.2132594/94‑1 (MQ=60)

       ATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCC                                                                                       <  SRR4302543.5510249/94‑1 (MQ=60)

       ATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCC                                                                                       <  SRR4302543.1119437/94‑1 (MQ=60)

        TCGCATTTTTAACGGCGGGGGGAAAGGGGTGATCGGGCAGCAGAAGGGGGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCC                                                                                      >  SRR4302543.5421699/1‑94 (MQ=60)

        TCGCATTTTTAACGGCGGGGGAAATGGTGTGATCGGGCAGCAGAAGGGTGGCATCCATATCGATAGCAATGAGTTTTATAGCCGTGAGTTCCCC                                                                                      >  SRR4302543.5500962/1‑94 (MQ=60)

          GCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAG                                                                                    <  SRR4302543.4355447/94‑1 (MQ=60)

          GCATTTTTAACGGCGGGGGAAATGGGGTGATCGGGGAGCAGGAGGGGGCCATCCATATCGATAGCAATGAGTTTTATAGCCGTGAGGTCCCCAG                                                                                    >  SRR4302543.5329521/1‑94 (MQ=60)

           CATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGG                                                                                   <  SRR4302543.1984257/94‑1 (MQ=60)

            ATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGT                                                                                  <  SRR4302543.4887334/94‑1 (MQ=60)

             TTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTA                                                                                 <  SRR4302543.2750380/94‑1 (MQ=60)

             TTTTTAACGGCGGGTGAAATGCTGTGATCGGGCAGCAGCAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTA                                                                                 <  SRR4302543.2750382/94‑1 (MQ=60)

             TTTTTAACGGCGGGGGAAAAGGTGTGATCGGGGAGCAGAAGGGGGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCCGGTA                                                                                 >  SRR4302543.456225/1‑94 (MQ=60)

               TTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGA                                                                               <  SRR4302543.7426294/94‑1 (MQ=60)

                TTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGAT                                                                              <  SRR4302543.5816418/94‑1 (MQ=60)

                TTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGAT                                                                              <  SRR4302543.5948943/94‑1 (MQ=60)

                TTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGAT                                                                              <  SRR4302543.3184094/94‑1 (MQ=60)

                TTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGAT                                                                              <  SRR4302543.3423859/94‑1 (MQ=60)

                 TAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATT                                                                             <  SRR4302543.7722093/94‑1 (MQ=60)

                 TAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATT                                                                             <  SRR4302543.2603083/94‑1 (MQ=60)

                 TAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATT                                                                             <  SRR4302543.656668/94‑1 (MQ=60)

                 TAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATT                                                                             <  SRR4302543.656667/94‑1 (MQ=60)

                  AACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTG                                                                            <  SRR4302543.7660263/94‑1 (MQ=60)

                  AACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTG                                                                            <  SRR4302543.5666895/94‑1 (MQ=60)

                    CGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGT                                                                          >  SRR4302543.1172621/1‑94 (MQ=60)

                    CGGCGGGTGAAATGGTATGATCGGGCACCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGT                                                                          <  SRR4302543.4911048/94‑1 (MQ=60)

                     GGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTT                                                                         <  SRR4302543.5542052/94‑1 (MQ=60)

                       CGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCC                                                                       >  SRR4302543.7862797/1‑94 (MQ=60)

                        GGGTGAAATGGTGTGATCGGTCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCT                                                                      <  SRR4302543.4226177/94‑1 (MQ=60)

                        GGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCT                                                                      <  SRR4302543.4226175/94‑1 (MQ=60)

                         GGTGAAATGGTGTGATCGGGGAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTG                                                                     <  SRR4302543.5362298/94‑1 (MQ=60)

                         GGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTG                                                                     <  SRR4302543.306292/94‑1 (MQ=60)

                         GGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTG                                                                     <  SRR4302543.6748024/94‑1 (MQ=60)

                          GTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGA                                                                    <  SRR4302543.7954446/94‑1 (MQ=60)

                          GTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGA                                                                    >  SRR4302543.7042151/1‑94 (MQ=60)

                           TGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGAC                                                                   <  SRR4302543.4632489/94‑1 (MQ=60)

                           TGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGAC                                                                   <  SRR4302543.2089801/94‑1 (MQ=60)

                            GAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACC                                                                  <  SRR4302543.3016926/94‑1 (MQ=60)

                            GAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACC                                                                  >  SRR4302543.6802406/1‑94 (MQ=60)

                            GAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACC                                                                  <  SRR4302543.5002696/94‑1 (MQ=60)

                             AAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCC                                                                 >  SRR4302543.1366266/1‑94 (MQ=60)

                              AATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCA                                                                <  SRR4302543.4215295/94‑1 (MQ=60)

                              AATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCA                                                                >  SRR4302543.3209086/1‑94 (MQ=60)

                              AATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCA                                                                >  SRR4302543.242012/1‑94 (MQ=60)

                              AATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCA                                                                <  SRR4302543.4215294/94‑1 (MQ=60)

                               ATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAT                                                               >  SRR4302543.1110854/1‑94 (MQ=60)

                               ATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAT                                                               <  SRR4302543.4300414/94‑1 (MQ=60)

                               ATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAT                                                               >  SRR4302543.1668978/1‑94 (MQ=60)

                               ATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAT                                                               >  SRR4302543.5497984/1‑94 (MQ=60)

                                TGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATG                                                              <  SRR4302543.3813822/94‑1 (MQ=60)

                                TGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATG                                                              >  SRR4302543.1056524/1‑94 (MQ=60)

                                 GGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGC                                                             >  SRR4302543.7424880/1‑94 (MQ=60)

                                 GGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGAGTGGTTCCTGACCCATGC                                                             >  SRR4302543.7106392/1‑94 (MQ=60)

                                  GTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCT                                                            >  SRR4302543.4588439/1‑94 (MQ=60)

                                  GTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCT                                                            <  SRR4302543.6012144/94‑1 (MQ=60)

                                    GTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAA                                                          >  SRR4302543.4673119/1‑94 (MQ=60)

                                    GTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAA                                                          >  SRR4302543.4681799/1‑94 (MQ=60)

                                    GTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAA                                                          >  SRR4302543.4729511/1‑94 (MQ=60)

                                    GTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAA                                                          >  SRR4302543.767653/1‑94 (MQ=60)

                                     TGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAC                                                         >  SRR4302543.2949355/1‑94 (MQ=60)

                                     TGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAC                                                         <  SRR4302543.4426977/94‑1 (MQ=60)

                                     TGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAC                                                         <  SRR4302543.4017801/94‑1 (MQ=60)

                                     TGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAC                                                         <  SRR4302543.4867076/94‑1 (MQ=60)

                                      GATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACG                                                        >  SRR4302543.5951910/1‑94 (MQ=60)

                                      GATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACG                                                        <  SRR4302543.3374633/94‑1 (MQ=60)

                                      GAGCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACG                                                        <  SRR4302543.7647286/94‑1 (MQ=60)

                                       ATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGC                                                       >  SRR4302543.5613538/1‑94 (MQ=60)

                                        TCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCG                                                      >  SRR4302543.7262231/1‑94 (MQ=60)

                                        TCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCG                                                      >  SRR4302543.6296160/1‑94 (MQ=60)

                                        TCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCG                                                      >  SRR4302543.6935318/1‑94 (MQ=60)

                                        ACGGGCAGCAGAAGGGTGCCATCCATAGCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCG                                                      <  SRR4302543.3731053/94‑1 (MQ=60)

                                         CGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGA                                                     >  SRR4302543.6857755/1‑94 (MQ=60)

                                          GGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGAT                                                    >  SRR4302543.2047990/1‑94 (MQ=60)

                                           GGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATT                                                   <  SRR4302543.6329605/94‑1 (MQ=60)

                                            GCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTC                                                  <  SRR4302543.5717956/94‑1 (MQ=60)

                                             CAGCAGAAGGTTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCC                                                 <  SRR4302543.6019240/94‑1 (MQ=60)

                                             CAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGcttcg                                                 >  SRR4302543.2592149/1‑89 (MQ=60)

                                             CAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCC                                                 <  SRR4302543.7724593/94‑1 (MQ=60)

                                             CAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCC                                                 <  SRR4302543.6858756/94‑1 (MQ=60)

                                             CAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCC                                                 <  SRR4302543.11630/94‑1 (MQ=60)

                                             CAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCC                                                 <  SRR4302543.1047353/94‑1 (MQ=60)

                                              AGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCG                                                <  SRR4302543.223165/94‑1 (MQ=60)

                                              AGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCG                                                <  SRR4302543.5081478/94‑1 (MQ=60)

                                              AGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCG                                                <  SRR4302543.5081477/94‑1 (MQ=60)

                                                CAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCT                                              >  SRR4302543.5320063/1‑94 (MQ=60)

                                                CAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCT                                              >  SRR4302543.100800/1‑94 (MQ=60)

                                                CAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCT                                              >  SRR4302543.4076328/1‑94 (MQ=60)

                                                 AGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTC                                             >  SRR4302543.6048407/1‑94 (MQ=60)

                                                 AGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTC                                             >  SRR4302543.5402162/1‑94 (MQ=60)

                                                     GGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAA                                         >  SRR4302543.2288213/1‑94 (MQ=60)

                                                       GTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGCTTCCGCTCAAAAAT                                       <  SRR4302543.5272818/94‑1 (MQ=60)

                                                       GTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAAT                                       >  SRR4302543.5698809/1‑94 (MQ=60)

                                                       GTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGATCCTGACCCATGCTAACGCGATTCCGCTCAAAAAT                                       >  SRR4302543.5537768/1‑94 (MQ=60)

                                                        TGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATC                                      >  SRR4302543.5679618/1‑94 (MQ=60)

                                                        TGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATA                                      >  SRR4302543.4163963/1‑94 (MQ=60)

                                                         GCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCA                                     >  SRR4302543.3955066/1‑94 (MQ=60)

                                                         GCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCA                                     <  SRR4302543.5813122/94‑1 (MQ=60)

                                                          CCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAG                                    >  SRR4302543.5680195/1‑94 (MQ=60)

                                                          CCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAG                                    <  SRR4302543.446115/94‑1 (MQ=60)

                                                           CATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGT                                   >  SRR4302543.7988858/1‑94 (MQ=60)

                                                           CATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGT                                   <  SRR4302543.7774137/94‑1 (MQ=60)

                                                           CATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGT                                   <  SRR4302543.1112235/94‑1 (MQ=60)

                                                           CATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGT                                   >  SRR4302543.5601663/1‑94 (MQ=60)

                                                           CATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGT                                   >  SRR4302543.4759905/1‑94 (MQ=60)

                                                           CATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGT                                   >  SRR4302543.7299981/1‑94 (MQ=60)

                                                           CATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAGTCTAACGCGATTCCGCTCAAAAATCAGT                                   >  SRR4302543.4759904/1‑94 (MQ=60)

                                                            ATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTA                                  >  SRR4302543.2328460/1‑94 (MQ=60)

                                                            ATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTA                                  >  SRR4302543.7314818/1‑94 (MQ=60)

                                                            ATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTA                                  <  SRR4302543.1063490/94‑1 (MQ=60)

                                                            ATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTA                                  >  SRR4302543.835627/1‑94 (MQ=60)

                                                            ATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTA                                  >  SRR4302543.1890949/1‑94 (MQ=60)

                                                            ATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTA                                  <  SRR4302543.3451819/94‑1 (MQ=60)

                                                            ATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTA                                  >  SRR4302543.3788238/1‑94 (MQ=60)

                                                             TCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTAC                                 <  SRR4302543.6116378/94‑1 (MQ=60)

                                                             TCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTAC                                 <  SRR4302543.6568064/94‑1 (MQ=60)

                                                             TCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTAC                                 <  SRR4302543.7002908/94‑1 (MQ=60)

                                                             TCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTAC                                 <  SRR4302543.1248731/94‑1 (MQ=60)

                                                             TCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTAC                                 <  SRR4302543.3668648/94‑1 (MQ=60)

                                                              CCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACA                                >  SRR4302543.4360966/1‑94 (MQ=60)

                                                              CCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACA                                >  SRR4302543.2377978/1‑94 (MQ=60)

                                                              CCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACA                                >  SRR4302543.5844108/1‑94 (MQ=60)

                                                              CCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACA                                >  SRR4302543.1037440/1‑94 (MQ=60)

                                                              CCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACA                                >  SRR4302543.4882467/1‑94 (MQ=60)

                                                              CCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACA                                <  SRR4302543.5565134/94‑1 (MQ=60)

                                                               CATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAA                               <  SRR4302543.1989429/94‑1 (MQ=60)

                                                               CATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAA                               >  SRR4302543.374067/1‑94 (MQ=60)

                                                                ATATCGATAGCAATGAGTTTAATAGCCGTTAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAAC                              <  SRR4302543.3221833/94‑1 (MQ=60)

                                                                ATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAAC                              >  SRR4302543.2607929/1‑94 (MQ=60)

                                                                ATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAAC                              >  SRR4302543.270989/1‑94 (MQ=60)

                                                                ATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAAC                              >  SRR4302543.4943126/1‑94 (MQ=60)

                                                                ATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAAC                              >  SRR4302543.2342243/1‑94 (MQ=60)

                                                                ATAACGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAAC                              >  SRR4302543.6685507/1‑94 (MQ=60)

                                                                 TATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACA                             <  SRR4302543.104879/94‑1 (MQ=60)

                                                                 TATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACA                             <  SRR4302543.2212996/94‑1 (MQ=60)

                                                                 TATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACA                             <  SRR4302543.1409649/94‑1 (MQ=60)

                                                                  ATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAC                            >  SRR4302543.6432841/1‑94 (MQ=60)

                                                                  ATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAC                            <  SRR4302543.6098437/94‑1 (MQ=60)

                                                                  ATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAC                            <  SRR4302543.2894195/94‑1 (MQ=60)

                                                                  ATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAC                            >  SRR4302543.2452108/1‑94 (MQ=60)

                                                                    CGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCC                          >  SRR4302543.1911730/1‑94 (MQ=60)

                                                                    CGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCC                          >  SRR4302543.4778342/1‑94 (MQ=60)

                                                                     GATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCG                         >  SRR4302543.895420/1‑94 (MQ=60)

                                                                      ATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGA                        >  SRR4302543.5402546/1‑94 (MQ=60)

                                                                      ATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGA                        >  SRR4302543.5836068/1‑94 (MQ=60)

                                                                      ATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGA                        <  SRR4302543.7922581/94‑1 (MQ=60)

                                                                      ATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGA                        >  SRR4302543.3253744/1‑94 (MQ=60)

                                                                       TAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAG                       <  SRR4302543.3930130/94‑1 (MQ=60)

                                                                        AGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGG                      <  SRR4302543.2430356/94‑1 (MQ=60)

                                                                        AGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGG                      >  SRR4302543.1006324/1‑94 (MQ=60)

                                                                        AGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGG                      <  SRR4302543.7509654/94‑1 (MQ=60)

                                                                        AGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGG                      <  SRR4302543.7509657/94‑1 (MQ=60)

                                                                        AGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGG                      >  SRR4302543.7740808/1‑94 (MQ=60)

                                                                         GCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGG                     >  SRR4302543.5202574/1‑94 (MQ=60)

                                                                          CAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA                    >  SRR4302543.739721/1‑94 (MQ=60)

                                                                          CAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA                    >  SRR4302543.2516180/1‑94 (MQ=60)

                                                                          CAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA                    <  SRR4302543.4032666/94‑1 (MQ=60)

                                                                            ATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAA                  >  SRR4302543.7037839/1‑94 (MQ=60)

                                                                            ATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAA                  <  SRR4302543.2376894/94‑1 (MQ=60)

                                                                            ATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAA                  >  SRR4302543.7836232/1‑94 (MQ=60)

                                                                            ATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAA                  <  SRR4302543.480432/94‑1 (MQ=60)

                                                                            ATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAA                  >  SRR4302543.2800868/1‑94 (MQ=60)

                                                                            ATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGAGATTCCGCTCAAAAATCAGTCCAACACCCGAGGGAAA                  >  SRR4302543.167113/1‑94 (MQ=60)

                                                                             TGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA                 <  SRR4302543.4558563/94‑1 (MQ=60)

                                                                             TGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA                 <  SRR4302543.5941571/94‑1 (MQ=60)

                                                                             TGAGTTTAATAGCCGTGAGTTCCCCAGGGAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA                 <  SRR4302543.4047650/94‑1 (MQ=60)

                                                                             AGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA                 <  SRR4302543.1097844/94‑1 (MQ=60)

                                                                              GAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑G               <  SRR4302543.7036472/94‑1 (MQ=60)

                                                                               CGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATAAGTACAACAACCGAGGGAAAA‑GG              >  SRR4302543.4058949/1‑94 (MQ=60)

                                                                               AGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GG              <  SRR4302543.1322786/94‑1 (MQ=60)

                                                                                GTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GG‑G            <  SRR4302543.2977539/94‑1 (MQ=60)

                                                                                GTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GG‑G            >  SRR4302543.7568219/1‑94 (MQ=60)

                                                                                GTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GG‑G            >  SRR4302543.2180518/1‑94 (MQ=60)

                                                                                  TTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GG‑GGG          >  SRR4302543.2065596/1‑94 (MQ=60)

                                                                                  TTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GG‑GGG          >  SRR4302543.7620935/1‑94 (MQ=60)

                                                                                   TAATAGCCGTGAGTTCCCCGGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACACCACCCGAGGGAAAA‑GG‑GGGG         <  SRR4302543.7075148/94‑1 (MQ=60)

                                                                                   TAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GG‑GGGG         <  SRR4302543.1467875/94‑1 (MQ=60)

                                                                                   TAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GG‑GGGG         <  SRR4302543.5598580/94‑1 (MQ=60)

                                                                                    AATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GG‑GGGga        >  SRR4302543.1865805/1‑92 (MQ=60)

                                                                                    AATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GG‑GGGga        <  SRR4302543.2779952/94‑3 (MQ=60)

                                                                                     ATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATTCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GG‑GGGgat       <  SRR4302543.5703874/94‑4 (MQ=60)

                                                                                     ATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GG‑GGGgat       <  SRR4302543.7726925/94‑4 (MQ=60)

                                                                                     ATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GG‑GGGgat       >  SRR4302543.930707/1‑91 (MQ=60)

                                                                                     ATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GG‑GGGgag       >  SRR4302543.4032664/1‑91 (MQ=60)

                                                                                      TAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGG‑GGGATG       <  SRR4302543.3797685/94‑1 (MQ=60)

                                                                                       AGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGG‑GGGATGC      >  SRR4302543.1887761/1‑94 (MQ=60)

                                                                                       AGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GGTGGGATGC      >  SRR4302543.7245005/1‑94 (MQ=60)

                                                                                        GCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGG‑GGGATGCA     <  SRR4302543.1612065/94‑1 (MQ=60)

                                                                                         CCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGG‑GGGATGCAA    >  SRR4302543.2225778/1‑94 (MQ=60)

                                                                                         CCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGG‑GGGATGCAA    <  SRR4302543.7724256/94‑1 (MQ=60)

                                                                                         CCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGG‑GGGATGCAA    >  SRR4302543.2907810/1‑94 (MQ=60)

                                                                                         CCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGG‑GGGATGCAA    >  SRR4302543.3539361/1‑94 (MQ=60)

                                                                                          CGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGG‑GGGATGCAAC   >  SRR4302543.2554019/1‑94 (MQ=60)

                                                                                          CGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGG‑GGGATGCAAC   >  SRR4302543.2165196/1‑94 (MQ=60)

                                                                                           GTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGG‑GGGATGCAACG  <  SRR4302543.5430916/94‑1 (MQ=60)

                                                                                           GTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGG‑GGGATGCAACG  <  SRR4302543.1997281/94‑1 (MQ=60)

TGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA‑GG‑GGGATGCAACG  >  NC_000913/3874488‑3874671

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`