Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,886,722 G→A G122S (GGC→AGC)  b3708 → tryptophanase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,886,7220GA99.8% 1633.1 / ‑6.3 448G122S (GGC→AGC) b3708tryptophanase
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base A (220/226);  total (221/227)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01

Only 100 of 468 total aligned reads displayed.

GGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAGGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGT  >  NC_000913/3886632‑3886811
                                                                                          |                                                                                         
 gTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAACAGGcc                                                                                        >  1:7195748/1‑93 (MQ=255)
  ttATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCt                                                                                       <  1:2195746/93‑1 (MQ=255)
  ttATCAATACACCATGCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCt                                                                                       <  2:5962573/93‑1 (MQ=255)
   tATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTg                                                                                      >  2:6434852/1‑93 (MQ=255)
   tATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTg                                                                                      <  1:7743252/93‑1 (MQ=255)
    aTCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAACGCCTgg                                                                                     >  2:5306893/1‑93 (MQ=255)
     tCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTggc                                                                                    >  1:2430998/1‑92 (MQ=255)
     tCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGa                                                                                    >  1:7464702/1‑93 (MQ=255)
      cAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGAt                                                                                   <  2:167223/93‑1 (MQ=255)
      cAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGAt                                                                                   <  1:3688888/93‑1 (MQ=255)
      cAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGAt                                                                                   <  2:7218024/93‑1 (MQ=255)
         tACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCgc                                                                                >  2:1132198/1‑93 (MQ=255)
          acacCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCgca                                                                               >  2:2299708/1‑93 (MQ=255)
           cacCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCgcag                                                                              >  2:2668059/1‑93 (MQ=255)
            acCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCgcagc                                                                             >  2:1805700/1‑93 (MQ=255)
             ccATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCgcagca                                                                            >  2:208818/1‑93 (MQ=255)
              cATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCaa                                                                           <  1:6173560/93‑1 (MQ=255)
                ttCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCaaaa                                                                         <  1:4896045/93‑1 (MQ=255)
                ttCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCaaaa                                                                         >  1:7284413/1‑93 (MQ=255)
                ttCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCaaaa                                                                         >  2:4731823/1‑93 (MQ=255)
                  ccGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAtg                                                                       <  1:963451/93‑1 (MQ=255)
                   cGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAtgg                                                                      >  2:2001483/1‑93 (MQ=255)
                   cGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAtgg                                                                      <  2:5225266/93‑1 (MQ=255)
                    gACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAtggt                                                                     <  1:3780532/93‑1 (MQ=255)
                    gACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAtggt                                                                     <  1:4367381/93‑1 (MQ=255)
                    gACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAtggt                                                                     >  2:7539855/1‑93 (MQ=255)
                    gACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCCCAGCAACAtggg                                                                     >  1:6747708/1‑92 (MQ=255)
                     aCTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGACAAAAGCCTGGATCGCAGCAACAtgggg                                                                    >  2:798183/1‑91 (MQ=255)
                      cTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAtggtgg                                                                   <  1:1858965/93‑1 (MQ=255)
                      cTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAtggtgg                                                                   >  2:4920120/1‑93 (MQ=255)
                      cTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAtggtgg                                                                   <  1:6985092/93‑1 (MQ=255)
                       tCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGc                                                                  <  1:6385041/93‑1 (MQ=255)
                       tCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGc                                                                  <  2:6964253/93‑1 (MQ=255)
                        cACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCg                                                                 <  2:5520333/93‑1 (MQ=255)
                         aCCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGt                                                                <  2:7786306/93‑1 (MQ=255)
                          ccAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGtt                                                               <  2:4405405/93‑1 (MQ=255)
                           cAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAACATGGTGGCGTtc                                                              >  1:3970223/1‑93 (MQ=255)
                           cAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTtc                                                              >  2:4520265/1‑93 (MQ=255)
                           cAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTtc                                                              >  2:6727417/1‑93 (MQ=255)
                             gggCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTtctc                                                            >  1:4240718/1‑93 (MQ=255)
                             gggCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTtctc                                                            <  1:3110471/93‑1 (MQ=255)
                                ccGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTaa                                                         >  1:6070257/1‑93 (MQ=255)
                                  gTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACt                                                       >  1:4128471/1‑93 (MQ=255)
                                   tGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAGAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTa                                                      <  2:6307398/93‑1 (MQ=255)
                                    ggCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTAt                                                     <  1:272280/93‑1 (MQ=255)
                                     gcgcAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTAtt                                                    <  2:566287/93‑1 (MQ=255)
                                     gcgcAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTAtt                                                    >  1:767351/1‑93 (MQ=255)
                                        cAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCt                                                 >  1:2649734/1‑93 (MQ=255)
                                         agagCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCtt                                                >  2:1262727/1‑93 (MQ=255)
                                          gagCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCttt                                               <  2:3913390/93‑1 (MQ=255)
                                           agCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTg                                              <  1:5290795/93‑1 (MQ=255)
                                           agCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTAATTCTTTg                                              <  2:2766693/93‑1 (MQ=255)
                                            gCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGa                                             <  1:5701414/93‑1 (MQ=255)
                                            gCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGa                                             <  2:2374687/93‑1 (MQ=255)
                                            gCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGa                                             >  2:7149143/1‑93 (MQ=255)
                                             cAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGAt                                            >  2:7636587/1‑93 (MQ=255)
                                              aaaTCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATa                                           >  2:506370/1‑93 (MQ=255)
                                               aaTCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGCTCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATAc                                          >  1:2813143/1‑93 (MQ=255)
                                               aaTCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATAc                                          >  1:5886591/1‑93 (MQ=255)
                                                 tCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCa                                        >  2:306498/1‑93 (MQ=255)
                                                 tCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCa                                        >  2:3785898/1‑93 (MQ=255)
                                                 tCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCa                                        <  2:1542091/93‑1 (MQ=255)
                                                  cTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCAc                                       <  1:7585170/93‑1 (MQ=255)
                                                   tataTTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACg                                      >  2:2194151/1‑93 (MQ=255)
                                                   tataTTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACg                                      >  2:4333248/1‑93 (MQ=255)
                                                     tatTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCa                                    >  1:2925418/1‑93 (MQ=255)
                                                     tatTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCa                                    >  2:5410599/1‑93 (MQ=255)
                                                     tatTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATAGAAGAAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCa                                    <  2:6000276/93‑1 (MQ=255)
                                                      atTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAg                                   <  2:7340693/93‑1 (MQ=255)
                                                      atTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAg                                   <  1:1304704/93‑1 (MQ=255)
                                                       ttCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAgg                                  <  2:936607/93‑1 (MQ=255)
                                                        tCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAggg                                 <  1:512311/93‑1 (MQ=255)
                                                        tCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAggc                                 >  1:1229493/1‑92 (MQ=255)
                                                         ccGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGc                                >  1:161828/1‑93 (MQ=255)
                                                           ggTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCa                              >  1:3299418/1‑93 (MQ=255)
                                                            gTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCAt                             >  2:3453861/1‑93 (MQ=255)
                                                             tACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACCATTTCTTTGATACCACGCAGGGCCATa                            >  1:5614259/1‑93 (MQ=255)
                                                              aCTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAg                           >  1:102199/1‑93 (MQ=255)
                                                               cTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGc                          <  2:6768210/93‑1 (MQ=255)
                                                                tGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGTTACCACGCAGGGCCATAgac                         >  2:3339107/1‑91 (MQ=255)
                                                                tGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGcc                         >  1:145392/1‑93 (MQ=255)
                                                                  aTTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAg                       >  1:447202/1‑93 (MQ=255)
                                                                  aTTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAg                       >  2:7055421/1‑93 (MQ=255)
                                                                  aTTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAg                       >  1:4670980/1‑93 (MQ=255)
                                                                   ttAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGa                      >  1:6894421/1‑93 (MQ=255)
                                                                    tAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGAt                     <  2:1016151/93‑1 (MQ=255)
                                                                    tAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGAt                     <  1:5508590/93‑1 (MQ=255)
                                                                     aaaaaaCGTGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATc                    >  2:2930520/1‑93 (MQ=255)
                                                                         aaCGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACg                >  1:7062870/1‑93 (MQ=255)
                                                                            gcgAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCt             >  1:20566/1‑93 (MQ=255)
                                                                            gcgAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCt             <  2:6458640/93‑1 (MQ=255)
                                                                            gcgAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCt             <  2:5827889/93‑1 (MQ=255)
                                                                                gCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTAc         <  2:4813300/93‑1 (MQ=255)
                                                                                 cAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTAcc        <  1:6446366/93‑1 (MQ=255)
                                                                                  aGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCg       <  2:4087763/93‑1 (MQ=255)
                                                                                     aaaaaaGCCTGGATGGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGc    <  1:4073130/93‑1 (MQ=255)
                                                                                     aaaaaaGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGc    <  2:6569053/93‑1 (MQ=255)
                                                                                      aaaaAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCg   >  1:6632386/1‑93 (MQ=255)
                                                                                       aaaaGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGt  >  2:6875360/1‑93 (MQ=255)
                                                                                       aaaaGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGt  <  2:2551734/93‑1 (MQ=255)
                                                                                          |                                                                                         
GGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAGGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGT  >  NC_000913/3886632‑3886811

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 224 total aligned reads displayed.
TTGGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAGGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGTAACG  >  NC_000913/3886630‑3886815
                                                                                            |                                                                                             
TTGGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAG                                                                                              <  SRR4302543.2609110/94‑1 (MQ=60)
 TGGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGC                                                                                             <  SRR4302543.3337082/94‑1 (MQ=60)
  GGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAGAAAGGCG                                                                                            >  SRR4302543.723624/1‑94 (MQ=60)
  GGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAACAGGCC                                                                                            >  SRR4302543.7265525/1‑94 (MQ=60)
  GGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCC                                                                                            <  SRR4302543.1248121/94‑1 (MQ=60)
  GGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCC                                                                                            >  SRR4302543.7288529/1‑94 (MQ=60)
   GTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCT                                                                                           <  SRR4302543.4627672/94‑1 (MQ=60)
   GTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCT                                                                                           <  SRR4302543.780970/94‑1 (MQ=60)
    TTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTG                                                                                          <  SRR4302543.1104981/94‑1 (MQ=60)
    TTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTG                                                                                          <  SRR4302543.2215477/94‑1 (MQ=60)
    TTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTG                                                                                          <  SRR4302543.5586555/94‑1 (MQ=60)
    TTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTG                                                                                          >  SRR4302543.3738221/1‑94 (MQ=60)
    TTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTG                                                                                          <  SRR4302543.7321357/94‑1 (MQ=60)
     TATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGG                                                                                         <  SRR4302543.7816392/94‑1 (MQ=60)
     TATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGG                                                                                         <  SRR4302543.4076228/94‑1 (MQ=60)
     TATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGG                                                                                         >  SRR4302543.3441192/1‑94 (MQ=60)
     TATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGG                                                                                         <  SRR4302543.3130250/94‑1 (MQ=60)
      ATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGA                                                                                        >  SRR4302543.7536211/1‑94 (MQ=60)
       TCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGAT                                                                                       <  SRR4302543.1239814/94‑1 (MQ=60)
       TCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGAT                                                                                       <  SRR4302543.2076420/94‑1 (MQ=60)
        CAATACACCATTCCGAGCCACCTGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATC                                                                                      <  SRR4302543.5281647/94‑1 (MQ=60)
        CAATACACCATTCCGACTCTCCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATC                                                                                      <  SRR4302543.7768148/94‑1 (MQ=60)
        CAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATC                                                                                      >  SRR4302543.6323254/1‑94 (MQ=60)
        CAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATC                                                                                      >  SRR4302543.4299860/1‑94 (MQ=60)
        CAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATC                                                                                      <  SRR4302543.5281646/94‑1 (MQ=60)
        CAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATC                                                                                      >  SRR4302543.6991290/1‑94 (MQ=60)
        CAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATC                                                                                      <  SRR4302543.3328565/94‑1 (MQ=60)
         AATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCG                                                                                     <  SRR4302543.388865/94‑1 (MQ=60)
          ATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATaga                                                                                    >  SRR4302543.7487924/1‑91 (MQ=60)
          ATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGC                                                                                    >  SRR4302543.4045991/1‑94 (MQ=60)
          ATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGC                                                                                    >  SRR4302543.1898714/1‑94 (MQ=60)
          ATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGC                                                                                    >  SRR4302543.3323106/1‑94 (MQ=60)
          ATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGC                                                                                    >  SRR4302543.2349321/1‑94 (MQ=60)
           TACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCA                                                                                   >  SRR4302543.4481650/1‑94 (MQ=60)
           AACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAA‑GCCTGGATCGCAG                                                                                  <  SRR4302543.1942117/94‑1 (MQ=60)
             CACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGC                                                                                 >  SRR4302543.1828355/1‑94 (MQ=60)
             CACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGC                                                                                 >  SRR4302543.7336067/1‑94 (MQ=60)
              ACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCA                                                                                >  SRR4302543.5584568/1‑94 (MQ=60)
              ACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCA                                                                                >  SRR4302543.3442222/1‑94 (MQ=60)
               CCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAA                                                                               >  SRR4302543.4673285/1‑94 (MQ=60)
                CATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAA                                                                              <  SRR4302543.6231944/94‑1 (MQ=60)
                 ATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAC                                                                             >  SRR4302543.669353/1‑94 (MQ=60)
                 ATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAA                                                                             >  SRR4302543.4740369/1‑94 (MQ=60)
                  TTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAT                                                                            <  SRR4302543.4940676/94‑1 (MQ=60)
                  TTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAT                                                                            <  SRR4302543.1813903/94‑1 (MQ=60)
                  TTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAT                                                                            <  SRR4302543.7623339/94‑1 (MQ=60)
                   TCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATG                                                                           <  SRR4302543.2096908/94‑1 (MQ=60)
                   TCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACCCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATG                                                                           >  SRR4302543.311074/1‑94 (MQ=60)
                    CCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGG                                                                          <  SRR4302543.971907/94‑1 (MQ=60)
                    CCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGG                                                                          <  SRR4302543.1048759/94‑1 (MQ=60)
                    CCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGG                                                                          >  SRR4302543.2745631/1‑94 (MQ=60)
                     CGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGT                                                                         <  SRR4302543.3520311/94‑1 (MQ=60)
                     CGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGT                                                                         >  SRR4302543.5640354/1‑94 (MQ=60)
                     CGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGG                                                                         >  SRR4302543.6738563/1‑94 (MQ=60)
                     CGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGG                                                                         >  SRR4302543.6811429/1‑94 (MQ=60)
                     CGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCCCAGCAACATGGG                                                                         >  SRR4302543.6811428/1‑94 (MQ=60)
                      GACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTG                                                                        <  SRR4302543.3813828/94‑1 (MQ=60)
                      GACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTG                                                                        <  SRR4302543.7401281/94‑1 (MQ=60)
                      GACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTG                                                                        <  SRR4302543.5000773/94‑1 (MQ=60)
                      GACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTG                                                                        <  SRR4302543.707965/94‑1 (MQ=60)
                      GACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTG                                                                        >  SRR4302543.6506843/1‑94 (MQ=60)
                       ACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGG                                                                       <  SRR4302543.276922/94‑1 (MQ=60)
                       ACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGG                                                                       >  SRR4302543.2919903/1‑94 (MQ=60)
                        CTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGC                                                                      <  SRR4302543.7050835/94‑1 (MQ=60)
                        CTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGC                                                                      <  SRR4302543.1309925/94‑1 (MQ=60)
                        CTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGC                                                                      >  SRR4302543.4360217/1‑94 (MQ=60)
                        CTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGC                                                                      <  SRR4302543.1875670/94‑1 (MQ=60)
                        CTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGC                                                                      <  SRR4302543.1330319/94‑1 (MQ=60)
                         TCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAGGCCTGGATCGCAGCAAAATGGTGGCG                                                                     >  SRR4302543.6906749/1‑94 (MQ=60)
                         TCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCG                                                                     >  SRR4302543.5417664/1‑94 (MQ=60)
                         TCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCG                                                                     <  SRR4302543.6213120/94‑1 (MQ=60)
                         TCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCG                                                                     >  SRR4302543.6294435/1‑94 (MQ=60)
                         TCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCG                                                                     <  SRR4302543.6445138/94‑1 (MQ=60)
                         CCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCG                                                                     <  SRR4302543.2874864/94‑1 (MQ=60)
                           ACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTT                                                                   >  SRR4302543.2501841/1‑94 (MQ=60)
                            CCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTC                                                                  <  SRR4302543.7881573/94‑1 (MQ=60)
                            CCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTC                                                                  <  SRR4302543.2587834/94‑1 (MQ=60)
                             CAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCT                                                                 >  SRR4302543.6499559/1‑94 (MQ=60)
                             CAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGGACTGATTAAAAAACACGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCT                                                                 >  SRR4302543.175802/1‑94 (MQ=60)
                              AGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTC                                                                >  SRR4302543.6468211/1‑94 (MQ=60)
                              AGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTC                                                                >  SRR4302543.7946916/1‑94 (MQ=60)
                              AGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTC                                                                >  SRR4302543.616474/1‑94 (MQ=60)
                              AGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTC                                                                >  SRR4302543.4279194/1‑94 (MQ=60)
                               GGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCT                                                               <  SRR4302543.4024006/94‑1 (MQ=60)
                               GGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCT                                                               <  SRR4302543.3138448/94‑1 (MQ=60)
                               GGGCCATGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCT                                                               <  SRR4302543.6569715/94‑1 (MQ=60)
                                GGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTA                                                              <  SRR4302543.5157053/94‑1 (MQ=60)
                                 GCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAA                                                             >  SRR4302543.6127788/1‑94 (MQ=60)
                                 GCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAA                                                             <  SRR4302543.7121902/94‑1 (MQ=60)
                                 GCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAA                                                             <  SRR4302543.7121901/94‑1 (MQ=60)
                                  CCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAAC                                                            <  SRR4302543.3777204/94‑1 (MQ=60)
                                   CGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACT                                                           <  SRR4302543.1270594/94‑1 (MQ=60)
                                   CGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACT                                                           <  SRR4302543.1270593/94‑1 (MQ=60)
                                   CGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACT                                                           >  SRR4302543.7020609/1‑94 (MQ=60)
                                   CGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACT                                                           <  SRR4302543.2833877/94‑1 (MQ=60)
                                   CGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACT                                                           >  SRR4302543.4165713/1‑94 (MQ=60)
                                    GTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTA                                                          >  SRR4302543.4441627/1‑94 (MQ=60)
                                    GTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTA                                                          >  SRR4302543.445181/1‑94 (MQ=60)
                                      GGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATT                                                        <  SRR4302543.274673/94‑1 (MQ=60)
                                      GGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATT                                                        >  SRR4302543.774097/1‑94 (MQ=60)
                                      GGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATT                                                        <  SRR4302543.2804894/94‑1 (MQ=60)
                                       GCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTT                                                       <  SRR4302543.3138925/94‑1 (MQ=60)
                                        CGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTC                                                      <  SRR4302543.1926415/94‑1 (MQ=60)
                                        CACAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTC                                                      <  SRR4302543.5760006/94‑1 (MQ=60)
                                         GCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCT                                                     >  SRR4302543.2673757/1‑94 (MQ=60)
                                           AGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTT                                                   >  SRR4302543.1521323/1‑94 (MQ=60)
                                           AGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTT                                                   <  SRR4302543.6799792/94‑1 (MQ=60)
                                             AGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGA                                                 <  SRR4302543.5338565/94‑1 (MQ=60)
                                              GCAAATCTATATTCCTGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGAT                                                <  SRR4302543.4132199/94‑1 (MQ=60)
                                              GCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGAT                                                <  SRR4302543.5753419/94‑1 (MQ=60)
                                              GCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGAT                                                <  SRR4302543.4132200/94‑1 (MQ=60)
                                              GCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGAT                                                <  SRR4302543.5995641/94‑1 (MQ=60)
                                              GCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGAT                                                <  SRR4302543.5995640/94‑1 (MQ=60)
                                                AAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGCTCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATAC                                              >  SRR4302543.2838911/1‑94 (MQ=60)
                                                AAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATAC                                              >  SRR4302543.5940249/1‑94 (MQ=60)
                                                AAATCTAAATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATAGCAGCAAAATGGTGGCGTTCTCTACCTATTTCTTTGATAC                                              <  SRR4302543.6829481/94‑1 (MQ=60)
                                                 AATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACC                                             >  SRR4302543.5144784/1‑94 (MQ=60)
                                                 AATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACC                                             >  SRR4302543.72346/1‑94 (MQ=60)
                                                  ATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCA                                            >  SRR4302543.7597488/1‑94 (MQ=60)
                                                  ATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCA                                            >  SRR4302543.888444/1‑94 (MQ=60)
                                                  ATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCA                                            <  SRR4302543.6312641/94‑1 (MQ=60)
                                                  ATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCA                                            >  SRR4302543.2768408/1‑94 (MQ=60)
                                                   TCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCAC                                           >  SRR4302543.7769128/1‑94 (MQ=60)
                                                    CTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACG                                          >  SRR4302543.390137/1‑94 (MQ=60)
                                                    CTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACG                                          <  SRR4302543.5670177/94‑1 (MQ=60)
                                                    CTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACG                                          <  SRR4302543.5345175/94‑1 (MQ=60)
                                                    CTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACG                                          <  SRR4302543.7657257/94‑1 (MQ=60)
                                                    CTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACG                                          >  SRR4302543.4254565/1‑94 (MQ=60)
                                                      ATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCA                                        >  SRR4302543.2951993/1‑94 (MQ=60)
                                                      ATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCA                                        >  SRR4302543.2132520/1‑94 (MQ=60)
                                                       TATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAG                                       >  SRR4302543.415591/1‑94 (MQ=60)
                                                       TATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAG                                       <  SRR4302543.2491375/94‑1 (MQ=60)
                                                       TATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAG                                       <  SRR4302543.7186400/94‑1 (MQ=60)
                                                       TATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAG                                       >  SRR4302543.2981612/1‑94 (MQ=60)
                                                       TATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAG                                       <  SRR4302543.6194747/94‑1 (MQ=60)
                                                         TTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGG                                     <  SRR4302543.2364692/94‑1 (MQ=60)
                                                         TTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGC                                     >  SRR4302543.1240545/1‑94 (MQ=60)
                                                          TCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGC                                    >  SRR4302543.5933126/1‑94 (MQ=60)
                                                          TCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGC                                    <  SRR4302543.517077/94‑1 (MQ=60)
                                                          TCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGC                                    <  SRR4302543.3844476/94‑1 (MQ=60)
                                                           CCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCC                                   <  SRR4302543.3740101/94‑1 (MQ=60)
                                                            CGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCA                                  >  SRR4302543.3329187/1‑94 (MQ=60)
                                                             GGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCAT                                 >  SRR4302543.4310085/1‑94 (MQ=60)
                                                             GGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCAT                                 <  SRR4302543.561177/94‑1 (MQ=60)
                                                              GTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATA                                >  SRR4302543.7442722/1‑94 (MQ=60)
                                                              GTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATA                                >  SRR4302543.1350337/1‑94 (MQ=60)
                                                              GTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATA                                >  SRR4302543.1350335/1‑94 (MQ=60)
                                                              GTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACCATTTCTTTGATACCACGCAGGGCCATA                                >  SRR4302543.5665420/1‑94 (MQ=60)
                                                               TGCTGATGAAAAAACGCGTGCAGAAAAAATGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAG                               <  SRR4302543.7691634/94‑1 (MQ=60)
                                                               TACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAG                               >  SRR4302543.103143/1‑94 (MQ=60)
                                                                ACTGATTAAAAAACGCGAGCAGGAAAAAAGGCTGGATCGCAGCAAAATGATGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGC                              >  SRR4302543.847896/1‑94 (MQ=60)
                                                                ACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGC                              <  SRR4302543.5997611/94‑1 (MQ=60)
                                                                ACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGC                              >  SRR4302543.5887110/1‑94 (MQ=60)
                                                                 CTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCC                             >  SRR4302543.1518015/1‑94 (MQ=60)
                                                                 CTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCC                             >  SRR4302543.146656/1‑94 (MQ=60)
                                                                 CTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCC                             >  SRR4302543.1682475/1‑94 (MQ=60)
                                                                  TGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCA                            >  SRR4302543.2719422/1‑94 (MQ=60)
                                                                   GATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAG                           >  SRR4302543.451385/1‑94 (MQ=60)
                                                                   GATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAG                           >  SRR4302543.4210100/1‑94 (MQ=60)
                                                                   GATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAG                           <  SRR4302543.7678498/94‑1 (MQ=60)
                                                                   GATTAAAAAACGCGAGCAGGAAAAAAGCCTGCATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAG                           <  SRR4302543.7678499/94‑1 (MQ=60)
                                                                    ATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGA                          >  SRR4302543.4209078/1‑94 (MQ=60)
                                                                    ATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGA                          >  SRR4302543.156038/1‑94 (MQ=60)
                                                                     TTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGAT                         <  SRR4302543.2912303/94‑1 (MQ=60)
                                                                      TAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATC                        <  SRR4302543.5558602/94‑1 (MQ=60)
                                                                      TAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATC                        <  SRR4302543.7552045/94‑1 (MQ=60)
                                                                       AAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCA                       <  SRR4302543.2631391/94‑1 (MQ=60)
                                                                        AAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAA                      >  SRR4302543.5441635/1‑94 (MQ=60)
                                                                        AAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAA                      >  SRR4302543.4019071/1‑94 (MQ=60)
                                                                         AAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAAC                     >  SRR4302543.7848400/1‑94 (MQ=60)
                                                                          AAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACG                    <  SRR4302543.3684181/94‑1 (MQ=60)
                                                                          AAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACG                    <  SRR4302543.5791741/94‑1 (MQ=60)
                                                                          AAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACG                    >  SRR4302543.4327408/1‑94 (MQ=60)
                                                                           AACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGG                   >  SRR4302543.479759/1‑94 (MQ=60)
                                                                           AACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGG                   <  SRR4302543.2261385/94‑1 (MQ=60)
                                                                            ACGCGAGGAGGAAAAAAGCCTGGATCGCAGCAACATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGC                  <  SRR4302543.7070926/94‑1 (MQ=60)
                                                                             CGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCT                 <  SRR4302543.4001281/94‑1 (MQ=60)
                                                                             CGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCT                 <  SRR4302543.5683628/94‑1 (MQ=60)
                                                                             CGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCT                 >  SRR4302543.20755/1‑94 (MQ=60)
                                                                              GCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTG                <  SRR4302543.5170170/94‑1 (MQ=60)
                                                                               CGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGT               >  SRR4302543.4902185/1‑94 (MQ=60)
                                                                               CGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGT               >  SRR4302543.6897139/1‑94 (MQ=60)
                                                                                GAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATCCCACGCAGGGCCATAGCCAGATCAACGGCTGTA              <  SRR4302543.4672813/94‑1 (MQ=60)
                                                                                 AGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTAC             >  SRR4302543.7002237/1‑94 (MQ=60)
                                                                                  GCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACC            <  SRR4302543.6484114/94‑1 (MQ=60)
                                                                                   CAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCG           <  SRR4302543.2324903/94‑1 (MQ=60)
                                                                                   CAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCG           >  SRR4302543.4849524/1‑94 (MQ=60)
                                                                                   CAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCG           <  SRR4302543.6507102/94‑1 (MQ=60)
                                                                                   CAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCG           <  SRR4302543.1369384/94‑1 (MQ=60)
                                                                                    AGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGT          >  SRR4302543.7422588/1‑94 (MQ=60)
                                                                                    AGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGG          >  SRR4302543.7259254/1‑94 (MQ=60)
                                                                                     GGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTG         <  SRR4302543.4700076/94‑1 (MQ=60)
                                                                                     GGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTG         <  SRR4302543.6684430/94‑1 (MQ=60)
                                                                                       AAAAAAGCCTGGATGGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCG       <  SRR4302543.4109621/94‑1 (MQ=60)
                                                                                       AAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCG       >  SRR4302543.6694963/1‑94 (MQ=60)
                                                                                         AAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTCCCGTGCGTA     >  SRR4302543.2714143/1‑94 (MQ=60)
                                                                                          AAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGTAA    <  SRR4302543.2749263/94‑1 (MQ=60)
                                                                                           AAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGTAAC   <  SRR4302543.7772910/94‑1 (MQ=60)
                                                                                            AGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGTAACG  >  SRR4302543.776529/1‑94 (MQ=60)
                                                                                            AGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGTAACG  <  SRR4302543.4784658/94‑1 (MQ=60)
                                                                                            |                                                                                             
TTGGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAGGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGTAACG  >  NC_000913/3886630‑3886815

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑