Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,888,869	G→A	A335A (GCG→GCA)	tnaB →	low affinity tryptophan permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,888,869	0	G	A	99.4%	1264.4 / NA	356	A335A (GCG→GCA)	tnaB	low affinity tryptophan permease
Reads supporting (aligned to +/- strand): ref base G (1/0); major base A (185/168); minor base C (2/0); total (188/168)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 394 total aligned reads displayed.

GTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCGTTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGC  >  NC_000913/3888779‑3888958

gttgttCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCatt                                                                                         <  2:644297/93‑1 (MQ=255)

 ttgttCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCattg                                                                                        >  2:3459427/1‑93 (MQ=255)

   gttCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCattgtt                                                                                      <  2:4239237/93‑1 (MQ=255)

   gttCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCattgtt                                                                                      >  2:1033350/1‑93 (MQ=255)

   gttCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCattgtt                                                                                      <  1:1650862/93‑1 (MQ=255)

    ttCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGGGTGTCAAAACCGTGCTGGTAACCGTTCTGCCACCTGCAtttttg                                                                                     >  1:2939885/1‑93 (MQ=255)

      cGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTa                                                                                   <  2:1508307/93‑1 (MQ=255)

      cGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTa                                                                                   <  1:4574836/93‑1 (MQ=255)

       gATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTAt                                                                                  >  2:2280862/1‑93 (MQ=255)

       gATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTAt                                                                                  >  1:4005172/1‑93 (MQ=255)

           aTCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGa                                                                              <  1:221815/93‑1 (MQ=255)

            tCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGAt                                                                             <  1:4978095/93‑1 (MQ=255)

            tCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGAt                                                                             <  1:7259631/93‑1 (MQ=255)

                 cGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTcc                                                                        <  1:6386543/93‑1 (MQ=255)

                  ggACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTccc                                                                       >  2:6636410/1‑93 (MQ=255)

                  ggACCTGTTTAAGATTGATAACTCCCACGGCGCGCGTGTCAAAACCGTGCTGTTAACCTTCCTGGCACCTGCATTGTTGTATCTTATGTTccc                                                                       >  2:6071100/1‑93 (MQ=255)

                   gACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCg                                                                      >  2:4605720/1‑93 (MQ=255)

                    aCCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCTACTGCATTGTTGTATCTGATCTTACCGa                                                                     >  1:5746084/1‑93 (MQ=255)

                      cTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCCAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTTCCGCAc                                                                   >  2:3795433/1‑93 (MQ=255)

                       tGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACg                                                                  <  1:2156942/93‑1 (MQ=255)

                         tttAAGGTTTATTACCCCCCCGGGGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGc                                                                <  1:6137818/93‑1 (MQ=255)

                         tttAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGc                                                                >  2:4425692/1‑93 (MQ=255)

                          ttAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCt                                                               <  2:3364762/93‑1 (MQ=255)

                             aGATTGATAACTCCCACGGCGGGTGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCttta                                                            <  1:13979/93‑1 (MQ=255)

                              gATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCtttat                                                           >  2:2802941/1‑93 (MQ=255)

                              gATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCtttat                                                           >  1:751125/1‑93 (MQ=255)

                                ttGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCtttattt                                                         >  1:2721561/1‑93 (MQ=255)

                                ttGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCtttattt                                                         <  2:567339/93‑1 (MQ=255)

                                 tGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATTTGATCTTCCCGAACGGCtttattta                                                        >  1:1225593/1‑93 (MQ=255)

                                 tGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCtttattta                                                        >  2:4880993/1‑93 (MQ=255)

                                 tGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCtttattta                                                        <  2:706532/93‑1 (MQ=255)

                                 tGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCtttattta                                                        <  2:1366949/93‑1 (MQ=255)

                                  aaTAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTAc                                                       >  2:6733846/2‑93 (MQ=255)

                                   aTAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACg                                                      <  1:792849/93‑1 (MQ=255)

                                    tAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGGCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACgg                                                     <  2:4676315/93‑1 (MQ=255)

                                       cTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGAt                                                  <  1:1917976/93‑1 (MQ=255)

                                        tCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATc                                                 >  1:6735136/1‑93 (MQ=255)

                                        tCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATc                                                 >  1:6074951/1‑93 (MQ=255)

                                        tCCCACGGCGGGCGTTTCAAAACCGTGCTGGTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGAtg                                                 >  2:1790016/1‑92 (MQ=255)

                                         cccACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATcg                                                >  2:3264566/1‑93 (MQ=255)

                                         cccACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATcg                                                >  1:1530021/1‑93 (MQ=255)

                                         cccACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATcg                                                <  2:7471853/93‑1 (MQ=255)

                                          ccACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATcgg                                               >  1:4298944/1‑93 (MQ=255)

                                           cACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATcggc                                              <  1:3816656/93‑1 (MQ=255)

                                             cggcggGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATcggcgg                                            >  2:3618094/1‑93 (MQ=255)

                                              ggcgggcgTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGt                                           <  1:6925773/93‑1 (MQ=255)

                                                cgggcgTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGc                                         <  2:7355911/93‑1 (MQ=255)

                                                 gggcgTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGcc                                        >  2:2576968/1‑93 (MQ=255)

                                                  ggcgTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCg                                       >  1:5993881/1‑93 (MQ=255)

                                                   gcgTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCgg                                      <  2:2152242/93‑1 (MQ=255)

                                                    cgTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCggg                                     <  2:2337081/93‑1 (MQ=255)

                                                     gTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGc                                    >  1:245429/1‑93 (MQ=255)

                                                     gTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGc                                    <  1:1030154/93‑1 (MQ=255)

                                                     gTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGc                                    <  1:1155552/93‑1 (MQ=255)

                                                      tttCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGCACGGCTTTATTTACGGGATCGGCGGTGCCGGGCt                                   >  1:4467464/1‑93 (MQ=255)

                                                      tttCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCt                                   >  2:283759/1‑93 (MQ=255)

                                                      tttCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCt                                   >  2:2073416/1‑93 (MQ=255)

                                                      tttCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCt                                   <  2:7096558/93‑1 (MQ=255)

                                                       ttCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCtg                                  >  1:621283/1‑93 (MQ=255)

                                                       ttCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCtg                                  >  1:3373392/1‑93 (MQ=255)

                                                           aaaCCGTGCTGTTACCCTTCCGGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTgcg                              <  2:6118906/93‑1 (MQ=255)

                                                           aaaCCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTgcg                              >  1:6041699/1‑93 (MQ=255)

                                                               cGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGccac                          <  1:5553304/93‑1 (MQ=255)

                                                                 tGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGccacca                        <  2:844909/93‑1 (MQ=255)

                                                                 tGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGccacca                        >  1:149062/1‑93 (MQ=255)

                                                                  gCTGTTAACCTTCATGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCAt                       <  1:5138420/93‑1 (MQ=255)

                                                                   cTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATc                      >  2:5482619/1‑93 (MQ=255)

                                                                    tGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCt                     >  2:5575967/1‑93 (MQ=255)

                                                                    tGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCt                     <  1:2544126/93‑1 (MQ=255)

                                                                    tGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCt                     <  2:5744242/93‑1 (MQ=255)

                                                                    tGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCt                     <  1:5022260/93‑1 (MQ=255)

                                                                     gTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTg                    >  2:4035350/1‑93 (MQ=255)

                                                                      ttAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTgg                   >  1:6525382/1‑93 (MQ=255)

                                                                      ttAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTgg                   <  2:6304636/93‑1 (MQ=255)

                                                                        aaCCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGc                 >  1:5838029/1‑93 (MQ=255)

                                                                         aCCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCg                >  2:7769199/1‑93 (MQ=255)

                                                                           cTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGt              <  2:3833200/93‑1 (MQ=255)

                                                                           cTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGt              <  2:1237040/93‑1 (MQ=255)

                                                                            ttCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTc             >  1:3265139/1‑93 (MQ=255)

                                                                            ttCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGGGCCGGGCTGTGCGCCACCATCTGGGCGGTc             >  1:483066/1‑93 (MQ=255)

                                                                            ttCCTGCCACCTGCATTGTTGTATCTGAGCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTc             <  1:4204743/93‑1 (MQ=255)

                                                                             tCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCa            <  2:5060905/93‑1 (MQ=255)

                                                                              ccTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCat           >  1:300577/1‑93 (MQ=255)

                                                                               cTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCatt          <  1:5646816/93‑1 (MQ=255)

                                                                                tGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGTATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCatta         <  1:1966631/93‑1 (MQ=255)

                                                                                tGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCatta         >  2:7931809/1‑93 (MQ=255)

                                                                                tGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCatta         >  1:2775457/1‑93 (MQ=255)

                                                                                tGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCatta         <  2:6960660/93‑1 (MQ=255)

                                                                                tGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCatta         >  2:3126897/1‑93 (MQ=255)

                                                                                tGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCatta         <  1:30601/93‑1 (MQ=255)

                                                                                tGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCatta         <  2:2942943/93‑1 (MQ=255)

                                                                                 tccACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCattat        <  1:7154109/92‑1 (MQ=255)

                                                                                 gCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCattat        <  1:2303920/93‑1 (MQ=255)

                                                                                 gCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCattat        <  1:7640536/93‑1 (MQ=255)

                                                                                  ccACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCattatt       <  2:535040/93‑1 (MQ=255)

                                                                                  ccACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCattatt       <  2:3927853/93‑1 (MQ=255)

                                                                                    aCCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTcc     >  1:9863/1‑93 (MQ=255)

                                                                                     ccTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCGGGGCTGTGCGCCACCATCTGGGCGGTCATTATTccc    <  1:3725964/93‑1 (MQ=255)

                                                                                     ccTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTccc    >  2:7891832/1‑93 (MQ=255)

                                                                                      cTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCg   <  1:94897/93‑1 (MQ=255)

GTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCGTTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGC  >  NC_000913/3888779‑3888958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 215 total aligned reads displayed.

GGGGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCGTTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGTG  >  NC_000913/3888776‑3888962

GGGGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCA                                                                                               <  SRR4302543.1595900/94‑1 (MQ=60)

 GGGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCAT                                                                                              <  SRR4302543.822832/94‑1 (MQ=60)

   GTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTG                                                                                            <  SRR4302543.404160/94‑1 (MQ=60)

   GTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTG                                                                                            <  SRR4302543.7659742/94‑1 (MQ=60)

   GTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTG                                                                                            <  SRR4302543.7306957/94‑1 (MQ=60)

     TGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTT                                                                                          >  SRR4302543.1314271/1‑94 (MQ=60)

     TGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTT                                                                                          <  SRR4302543.5015726/94‑1 (MQ=60)

     TGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTT                                                                                          >  SRR4302543.6632825/1‑94 (MQ=60)

      GTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGGGTGTCAAAACCGTGCTGGTAACCGTTCTGCCACCTGCATTTTTG                                                                                         >  SRR4302543.2966582/1‑94 (MQ=60)

      GTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTG                                                                                         <  SRR4302543.1665630/94‑1 (MQ=60)

        TCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTA                                                                                       >  SRR4302543.4566048/1‑94 (MQ=60)

         CGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTAT                                                                                      >  SRR4302543.4040908/1‑94 (MQ=60)

         CGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTAT                                                                                      <  SRR4302543.4616433/94‑1 (MQ=60)

         CGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTAT                                                                                      >  SRR4302543.1221937/1‑94 (MQ=60)

           ATTATCTGGCGGACCTGTTTAAGATTTATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCT                                                                                    >  SRR4302543.1326569/1‑94 (MQ=60)

           ATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTTTATCT                                                                                    >  SRR4302543.2772119/1‑94 (MQ=60)

           ATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGCTTCAAAACCGGGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCT                                                                                    >  SRR4302543.2772373/1‑94 (MQ=60)

            TTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTTTATCTG                                                                                   >  SRR4302543.6066654/1‑94 (MQ=60)

            TTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTG                                                                                   >  SRR4302543.1448117/1‑94 (MQ=60)

            TTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTG                                                                                   >  SRR4302543.5635695/1‑94 (MQ=60)

              ATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGAT                                                                                 <  SRR4302543.223724/94‑1 (MQ=60)

              ATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGAT                                                                                 >  SRR4302543.471684/1‑94 (MQ=60)

               TCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATC                                                                                <  SRR4302543.7329792/94‑1 (MQ=60)

               TCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATC                                                                                <  SRR4302543.5023413/94‑1 (MQ=60)

                CTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCT                                                                               <  SRR4302543.6061583/94‑1 (MQ=60)

                CTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCT                                                                               <  SRR4302543.1168633/94‑1 (MQ=60)

                CTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCT                                                                               <  SRR4302543.3108310/94‑1 (MQ=60)

                 TGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTT                                                                              <  SRR4302543.6522717/94‑1 (MQ=60)

                 TGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTT                                                                              >  SRR4302543.3806584/1‑94 (MQ=60)

                 TGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTT                                                                              >  SRR4302543.6003071/1‑94 (MQ=60)

                 TGGCGGACCTGTTTAAGATTGATAACTCACACGGCGGGCGTTTAACAAGCCTGCTGTTTACGTTCCAGCCACCTGCATTGTTGTATCTGATCTT                                                                              >  SRR4302543.8006861/1‑94 (MQ=53)

                   GCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCC                                                                            >  SRR4302543.7284349/1‑94 (MQ=60)

                   GCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCC                                                                            <  SRR4302543.6038324/94‑1 (MQ=60)

                   GCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTG‑TAACCTTCCTGCCACCTGCCTTTTTGTATCTGTTCTTCCC                                                                           >  SRR4302543.5971360/1‑94 (MQ=60)

                     GGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCG                                                                          <  SRR4302543.5383655/94‑1 (MQ=60)

                     GGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCG                                                                          <  SRR4302543.3997577/94‑1 (MQ=60)

                     GGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCG                                                                          <  SRR4302543.2495193/94‑1 (MQ=60)

                      GACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCTACTGCATTGTTGTATCTGATCTTACCGA                                                                         >  SRR4302543.5798458/1‑94 (MQ=60)

                      GACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGA                                                                         >  SRR4302543.2319605/1‑94 (MQ=60)

                       ACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAACACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGTA                                                                        >  SRR4302543.6908690/1‑94 (MQ=60)

                       ACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAA                                                                        >  SRR4302543.1772837/1‑94 (MQ=60)

                        CCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAAC                                                                       <  SRR4302543.5032904/94‑1 (MQ=60)

                        CCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAAC                                                                       <  SRR4302543.1560869/94‑1 (MQ=60)

                        CCTGTTTAAGATTGATAACTCCCACGGCGGGCGCTTCAAAATCGTGCTGCTTACCTTCCTCCCCCCTGCATTATTGTATCTGATCTTCCCGAAC                                                                       >  SRR4302543.3074773/1‑94 (MQ=60)

                         CTGTTTAATATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACG                                                                      <  SRR4302543.1135130/94‑1 (MQ=60)

                         CTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGCACG                                                                      >  SRR4302543.456957/1‑94 (MQ=60)

                         CTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACG                                                                      <  SRR4302543.2227517/94‑1 (MQ=60)

                         CTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACG                                                                      <  SRR4302543.6522167/94‑1 (MQ=60)

                          TGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGGTGTTAACCTTCCTGCCACCTGCATTGTTTTATCTCATCTTCCCGAcctg                                                                     >  SRR4302543.960227/1‑90 (MQ=60)

                          TGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGG                                                                     >  SRR4302543.33660/1‑94 (MQ=60)

                          TGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGG                                                                     >  SRR4302543.960229/1‑94 (MQ=60)

                          TGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGG                                                                     <  SRR4302543.2176255/94‑1 (MQ=60)

                           GTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGC                                                                    <  SRR4302543.3318718/94‑1 (MQ=60)

                           GTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGC                                                                    <  SRR4302543.1174248/94‑1 (MQ=60)

                           GTTTAAGATTGATAACTCCCACGGCGGGAGGTTTAAAACCGTGCTGTTAACCTTTCTGTCACCTGCAATGTTGTATCTGATCTTCCCGAACGGC                                                                    >  SRR4302543.2255672/1‑94 (MQ=60)

                            tttaaggtttattacccccccgggGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCT                                                                   <  SRR4302543.6195959/70‑1 (MQ=60)

                               AAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTT                                                                >  SRR4302543.2470137/1‑94 (MQ=60)

                                AGATTGATAACTCCCACGGCGGGTGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTAT                                                               <  SRR4302543.14101/94‑1 (MQ=60)

                                AGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTAT                                                               >  SRR4302543.529579/1‑94 (MQ=60)

                                AGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTAT                                                               <  SRR4302543.2890155/94‑1 (MQ=60)

                                AGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTAT                                                               <  SRR4302543.6635561/94‑1 (MQ=60)

                                AGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTAT                                                               >  SRR4302543.757788/1‑94 (MQ=60)

                                 GATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATT                                                              <  SRR4302543.2198956/94‑1 (MQ=60)

                                  ATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTT                                                             >  SRR4302543.2746308/1‑94 (MQ=60)

                                  ATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTT                                                             <  SRR4302543.2713781/94‑1 (MQ=60)

                                  ATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTT                                                             <  SRR4302543.6077092/94‑1 (MQ=60)

                                   TTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATTTGATCTTCCCGAACGGCTTTATTTA                                                            >  SRR4302543.1236606/1‑94 (MQ=60)

                                   TTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTA                                                            <  SRR4302543.1649955/94‑1 (MQ=60)

                                    TGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTAC                                                           <  SRR4302543.4423425/94‑1 (MQ=60)

                                    TGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTAC                                                           <  SRR4302543.7481660/94‑1 (MQ=60)

                                     GATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACG                                                          >  SRR4302543.610857/1‑94 (MQ=60)

                                      ATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGG                                                         <  SRR4302543.799817/94‑1 (MQ=60)

                                      ATAACTCCCACGGCGGGCGTTTCAAAACCGCGCTGTTAACCTTCCTGCCATCTGCCTTGTTGTATCAGATCCTCACGAACGGCTTTATTTATGG                                                         >  SRR4302543.3173890/1‑94 (MQ=60)

                                        AACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGA                                                       <  SRR4302543.6162614/94‑1 (MQ=60)

                                         ACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGAT                                                      <  SRR4302543.1648963/94‑1 (MQ=60)

                                         ACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGAT                                                      >  SRR4302543.302003/1‑94 (MQ=60)

                                          CTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATC                                                     >  SRR4302543.6132529/1‑94 (MQ=60)

                                          CTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATC                                                     >  SRR4302543.7297159/1‑94 (MQ=60)

                                          CTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATC                                                     >  SRR4302543.6798758/1‑94 (MQ=60)

                                           TCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCG                                                    >  SRR4302543.1543739/1‑94 (MQ=60)

                                           TCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCG                                                    >  SRR4302543.194174/1‑94 (MQ=60)

                                           TCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCG                                                    >  SRR4302543.5873248/1‑94 (MQ=60)

                                           TCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCG                                                    <  SRR4302543.5876078/94‑1 (MQ=60)

                                            CCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGG                                                   <  SRR4302543.7541087/94‑1 (MQ=60)

                                            CCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGG                                                   >  SRR4302543.6484035/1‑94 (MQ=60)

                                            CCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGG                                                   >  SRR4302543.4338010/1‑94 (MQ=60)

                                             CCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGC                                                  >  SRR4302543.1144904/1‑94 (MQ=60)

                                             CCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGC                                                  >  SRR4302543.3786136/1‑94 (MQ=60)

                                             CCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGC                                                  <  SRR4302543.1997222/94‑1 (MQ=60)

                                              CACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCCTTGTTGTATCTGATCTTCACGAACGGCTTTATTTACGGGATCGGCG                                                 >  SRR4302543.1343263/1‑94 (MQ=60)

                                              CACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCG                                                 <  SRR4302543.3850304/94‑1 (MQ=60)

                                               ACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGG                                                <  SRR4302543.4301014/94‑1 (MQ=60)

                                               ACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGG                                                >  SRR4302543.4699677/1‑94 (MQ=60)

                                                CGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGG                                               >  SRR4302543.5759664/1‑94 (MQ=60)

                                                 GGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTG                                              <  SRR4302543.6990897/94‑1 (MQ=60)

                                                   CGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCC                                            <  SRR4302543.6233520/94‑1 (MQ=60)

                                                    GTGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGGGCCG                                           >  SRR4302543.376158/1‑94 (MQ=60)

                                                    GGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCG                                           >  SRR4302543.4552758/1‑94 (MQ=60)

                                                    GGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCG                                           >  SRR4302543.6048825/1‑94 (MQ=60)

                                                    GGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCG                                           <  SRR4302543.565183/94‑1 (MQ=60)

                                                    GGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCG                                           <  SRR4302543.6408285/94‑1 (MQ=60)

                                                    GGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCG                                           >  SRR4302543.3407850/1‑94 (MQ=60)

                                                     GGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGG                                          >  SRR4302543.4211324/1‑94 (MQ=60)

                                                     GGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGG                                          <  SRR4302543.7683449/94‑1 (MQ=60)

                                                       CGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGC                                        >  SRR4302543.247557/1‑94 (MQ=60)

                                                        GTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGCACGGCTTTATTTACGGGATCGGCGGTGCCGGGCT                                       >  SRR4302543.4507968/1‑94 (MQ=60)

                                                        GTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCT                                       >  SRR4302543.1960740/1‑94 (MQ=60)

                                                        GTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCT                                       <  SRR4302543.1039291/94‑1 (MQ=60)

                                                        GTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCT                                       >  SRR4302543.945819/1‑94 (MQ=60)

                                                        GTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCT                                       <  SRR4302543.1166068/94‑1 (MQ=60)

                                                        GTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCT                                       >  SRR4302543.7868503/1‑94 (MQ=60)

                                                        GTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCT                                       >  SRR4302543.4901970/1‑94 (MQ=60)

                                                        GTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCT                                       >  SRR4302543.5065768/1‑94 (MQ=60)

                                                        GTTTCAAAACCGTCCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCT                                       <  SRR4302543.2425882/94‑1 (MQ=60)

                                                         TTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTG                                      >  SRR4302543.3403681/1‑94 (MQ=60)

                                                         TTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTG                                      <  SRR4302543.186419/94‑1 (MQ=60)

                                                         TTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTG                                      >  SRR4302543.626971/1‑94 (MQ=60)

                                                         GTTCAAAACCGTGCTGGTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTG                                      <  SRR4302543.1971134/94‑1 (MQ=60)

                                                           TCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTG                                    <  SRR4302543.6219938/94‑1 (MQ=60)

                                                           TCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTG                                    <  SRR4302543.2875942/94‑1 (MQ=60)

                                                           TCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTG                                    >  SRR4302543.3939339/1‑94 (MQ=60)

                                                           TCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTATATCTGATCTTCCCGAACGGCCTTATTTACGGGATCGGaggtccccggccgtc                                    >  SRR4302543.4172709/1‑79 (MQ=60)

                                                            CAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGC                                   >  SRR4302543.2347755/1‑94 (MQ=60)

                                                            CAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGC                                   >  SRR4302543.6112511/1‑94 (MQ=60)

                                                             AAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCG                                  >  SRR4302543.6098879/1‑94 (MQ=60)

                                                               AACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCC                                >  SRR4302543.7899061/1‑94 (MQ=60)

                                                                 CCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTCTGCGCCAC                              >  SRR4302543.487948/1‑94 (MQ=60)

                                                                  CGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCCCC                             >  SRR4302543.5618810/1‑94 (MQ=60)

                                                                  CGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACC                             <  SRR4302543.5603815/94‑1 (MQ=60)

                                                                   GTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCA                            >  SRR4302543.150353/1‑94 (MQ=60)

                                                                    TGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCAT                           >  SRR4302543.305109/1‑94 (MQ=60)

                                                                    TGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCAT                           <  SRR4302543.1515739/94‑1 (MQ=60)

                                                                     GCTGTTAACCTTCATGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATC                          <  SRR4302543.5184869/94‑1 (MQ=60)

                                                                      CTGTTAACCTTCCTGCCACCTGCGTTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGACCGGCGGTGCCGCGCCGTGCGCCACCAccg                         >  SRR4302543.2697818/1‑91 (MQ=60)

                                                                      CTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTTCTCCACCATCT                         >  SRR4302543.2959408/1‑94 (MQ=60)

                                                                       TGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGGGGTGCCGGGgtggggggccccatctg                        >  SRR4302543.61603/1‑77 (MQ=60)

                                                                       TGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCAGCATCTG                        >  SRR4302543.61604/1‑94 (MQ=60)

                                                                       TGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTG                        >  SRR4302543.6404917/1‑94 (MQ=60)

                                                                       TGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTG                        >  SRR4302543.3318918/1‑94 (MQ=60)

                                                                       TGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTG                        >  SRR4302543.506846/1‑94 (MQ=60)

                                                                       TGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTG                        <  SRR4302543.5067965/94‑1 (MQ=60)

                                                                       TGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTG                        <  SRR4302543.2567328/94‑1 (MQ=60)

                                                                       TGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTG                        <  SRR4302543.6226575/94‑1 (MQ=60)

                                                                        GTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGG                       <  SRR4302543.7494701/94‑1 (MQ=60)

                                                                        GTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGG                       >  SRR4302543.6586827/1‑94 (MQ=60)

                                                                        GTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGG                       <  SRR4302543.6957879/94‑1 (MQ=60)

                                                                        GTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGG                       >  SRR4302543.1772015/1‑94 (MQ=60)

                                                                          TAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGC                     >  SRR4302543.5891131/1‑94 (MQ=60)

                                                                          TAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGC                     >  SRR4302543.4404260/1‑94 (MQ=60)

                                                                          TAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGC                     <  SRR4302543.438464/94‑1 (MQ=60)

                                                                           AACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCG                    >  SRR4302543.4260975/1‑94 (MQ=60)

                                                                            ACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGG                   <  SRR4302543.2755037/94‑1 (MQ=60)

                                                                             CCTTCCTGCCACCTGCATTGTTGTATCTGATCTGCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGT                  <  SRR4302543.7710324/94‑1 (MQ=60)

                                                                              CTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTC                 >  SRR4302543.3294648/1‑94 (MQ=60)

                                                                              CTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGGGCCGGGCTGTGCGCCACCATCTGGGCGGTC                 >  SRR4302543.487527/1‑94 (MQ=60)

                                                                                TCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCAT               >  SRR4302543.2209141/1‑94 (MQ=60)

                                                                                TCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCAT               <  SRR4302543.1413049/94‑1 (MQ=60)

                                                                                TCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCAT               >  SRR4302543.303278/1‑94 (MQ=60)

                                                                                 CCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATT              >  SRR4302543.6677600/1‑94 (MQ=60)

                                                                                 CCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATT              <  SRR4302543.842615/94‑1 (MQ=60)

                                                                                 CCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATT              >  SRR4302543.6811152/1‑94 (MQ=60)

                                                                                 CCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATT              <  SRR4302543.7177940/94‑1 (MQ=60)

                                                                                 CCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATT              <  SRR4302543.7721722/94‑1 (MQ=60)

                                                                                  CTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTA             >  SRR4302543.2800729/1‑94 (MQ=60)

                                                                                  CTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTA             >  SRR4302543.1518037/1‑94 (MQ=60)

                                                                                  CTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTA             <  SRR4302543.5698295/94‑1 (MQ=60)

                                                                                   TGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGTATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTAT            <  SRR4302543.1984261/94‑1 (MQ=60)

                                                                                   TGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTAT            <  SRR4302543.30869/94‑1 (MQ=60)

                                                                                    TCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATT           <  SRR4302543.7223642/94‑1 (MQ=60)

                                                                                    GCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATT           <  SRR4302543.2324908/94‑1 (MQ=60)

                                                                                     CCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCTCCACCATCTGGGCGGTCATTATTC          >  SRR4302543.4249133/1‑94 (MQ=60)

                                                                                     CCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTC          <  SRR4302543.6328844/94‑1 (MQ=60)

                                                                                     CCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTC          >  SRR4302543.2558114/1‑94 (MQ=60)

                                                                                     CCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTC          >  SRR4302543.2023702/1‑94 (MQ=60)

                                                                                      CACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCC         >  SRR4302543.3140396/1‑94 (MQ=60)

                                                                                      CACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCC         >  SRR4302543.2539073/1‑94 (MQ=60)

                                                                                      CACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCC         >  SRR4302543.3757468/1‑94 (MQ=60)

                                                                                      CACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCC         <  SRR4302543.216095/94‑1 (MQ=60)

                                                                                      CACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCC         >  SRR4302543.5107453/1‑94 (MQ=60)

                                                                                      CACCTGCATTG‑TGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCC        >  SRR4302543.5474566/1‑94 (MQ=60)

                                                                                       ACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCC        >  SRR4302543.952509/1‑94 (MQ=60)

                                                                                        CCTGCATTGTTGTATCTGATCTTCCCTAGCGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCG       <  SRR4302543.4041705/94‑1 (MQ=60)

                                                                                        CCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCGGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCG       <  SRR4302543.3758731/94‑1 (MQ=60)

                                                                                        CCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCG       <  SRR4302543.3021427/94‑1 (MQ=60)

                                                                                         CTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTTCGCCGCCATCTGGGCGGTCATTATTCCCGC      >  SRR4302543.2320883/1‑94 (MQ=60)

                                                                                         CTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGC      >  SRR4302543.1543441/1‑94 (MQ=60)

                                                                                         CTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGC      <  SRR4302543.95782/94‑1 (MQ=60)

                                                                                         CTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGC      <  SRR4302543.5112846/94‑1 (MQ=60)

                                                                                         CTGCATTGTTGTATCTGATCTTACCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGC      <  SRR4302543.5797305/94‑1 (MQ=60)

                                                                                          TGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTTCCGCA     >  SRR4302543.66724/1‑94 (MQ=60)

                                                                                          TGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCA     >  SRR4302543.2581464/1‑94 (MQ=60)

                                                                                          TGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCCGGCTGGCCGCCACCATCTGGTCGGCCATTATTCCCGCA     >  SRR4302543.66506/1‑94 (MQ=60)

                                                                                          TGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGGGCCGGGCTGTGCGCCACCATCTGGGCGGTAATTATTCCCGCA     >  SRR4302543.5668690/1‑94 (MQ=60)

                                                                                           GCATTGTTATATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAG    <  SRR4302543.3929033/94‑1 (MQ=60)

                                                                                            CATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGT   <  SRR4302543.4512488/94‑1 (MQ=60)

                                                                                            CATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGCCATTATTCCCGCAGT   >  SRR4302543.363318/1‑94 (MQ=60)

                                                                                             ATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGTG  >  SRR4302543.7957491/1‑94 (MQ=60)

                                                                                             ATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGTG  <  SRR4302543.3329482/94‑1 (MQ=60)

                                                                                             ATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGTG  >  SRR4302543.5298795/1‑94 (MQ=60)

                                                                                             ATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGTG  >  SRR4302543.6197419/1‑94 (MQ=60)

GGGGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCGTTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGTG  >  NC_000913/3888776‑3888962

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`