Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,923,857 T→C Q76R (CAG→CGG)  mioC ← MioC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,923,8570TC99.5% 1345.0 / ‑4.3 425Q76R (CAG→CGG) mioCMioC
Reads supporting (aligned to +/- strand):  ref base T (0/2);  new base C (217/206);  total (217/208)
Fisher's exact test for biased strand distribution p-value = 2.39e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 432 total aligned reads displayed.

TCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGG  >  NC_000913/3923767‑3923947
                                                                                          |                                                                                          
tCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGt                                                                                          <  2:5987863/93‑1 (MQ=255)
tCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGt                                                                                          >  1:3720758/1‑93 (MQ=255)
 cGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGtt                                                                                         >  1:2625798/1‑93 (MQ=255)
   aGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTcc                                                                                       >  1:1678900/1‑93 (MQ=255)
   aGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTcc                                                                                       <  2:6117281/93‑1 (MQ=255)
   aGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTcc                                                                                       <  2:5359685/93‑1 (MQ=255)
    gTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCt                                                                                      <  1:5093245/93‑1 (MQ=255)
       tATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCa                                                                                   >  1:4440379/1‑93 (MQ=255)
       tATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCa                                                                                   >  2:4442111/1‑93 (MQ=255)
         tCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAAt                                                                                 <  1:4745172/93‑1 (MQ=255)
         tCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAAt                                                                                 >  2:454114/1‑93 (MQ=255)
         tCGATAGCCCCACAAAAGGAGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTGCCGTTCCTGCAAt                                                                                 >  1:6993589/1‑93 (MQ=255)
           gATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGc                                                                               <  1:5691234/93‑1 (MQ=255)
           gATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGc                                                                               <  1:738102/93‑1 (MQ=255)
               gCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCa                                                                           <  1:6798952/93‑1 (MQ=255)
               gCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCa                                                                           <  2:7735554/93‑1 (MQ=255)
                ccccACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCAt                                                                          <  1:805474/93‑1 (MQ=255)
                ccccACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCAt                                                                          <  1:4879423/93‑1 (MQ=255)
                  ccACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATag                                                                        <  2:56817/93‑1 (MQ=255)
                    acaAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaa                                                                      >  2:5399495/1‑93 (MQ=255)
                     caAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaa                                                                     <  1:3142683/93‑1 (MQ=255)
                     caAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaa                                                                     <  1:1556876/93‑1 (MQ=255)
                      aaaaGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaag                                                                    <  2:316162/93‑1 (MQ=255)
                      aaaaGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaag                                                                    >  2:2780467/1‑93 (MQ=255)
                       aaaGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaagg                                                                   <  1:1437109/93‑1 (MQ=255)
                        aaGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaagga                                                                  >  1:3919756/1‑93 (MQ=255)
                         aGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggag                                                                 >  1:1897196/1‑93 (MQ=255)
                          ggTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggaga                                                                >  1:6539715/1‑93 (MQ=255)
                           gtgtCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggagaa                                                               >  1:897098/1‑93 (MQ=255)
                           gtgtCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggagaa                                                               <  2:3247526/93‑1 (MQ=255)
                           gtgtCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggagaa                                                               >  2:4783261/1‑93 (MQ=255)
                           gtgtCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggagaa                                                               >  2:4849467/1‑93 (MQ=255)
                           gtgtCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggagaa                                                               <  1:10688/93‑1 (MQ=255)
                           gtgtCAGATTCACGACTTCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggagaa                                                               <  2:1302304/93‑1 (MQ=255)
                             gtCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggagaaag                                                             <  2:5235760/93‑1 (MQ=255)
                             gtCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggagaaag                                                             >  1:6880607/1‑93 (MQ=255)
                              tCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggagaaagg                                                            >  2:4994022/1‑93 (MQ=255)
                              tCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggagaaagg                                                            <  1:580575/93‑1 (MQ=255)
                               cATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGt                                                           >  1:7207879/1‑93 (MQ=255)
                                atatTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGtt                                                          <  2:7282789/93‑1 (MQ=255)
                                atatTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGtt                                                          <  2:6574637/93‑1 (MQ=255)
                                 tatTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTg                                                         >  1:6465305/1‑93 (MQ=255)
                                   ttCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTc                                                       >  1:7840693/1‑93 (MQ=255)
                                    tCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTcc                                                      >  1:4260183/1‑93 (MQ=255)
                                    tCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTcc                                                      >  1:1016800/1‑93 (MQ=255)
                                      aCGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCgg                                                    >  2:4244673/1‑93 (MQ=255)
                                      aCGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCgg                                                    <  1:1205530/93‑1 (MQ=255)
                                       cGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGa                                                   <  2:7499004/93‑1 (MQ=255)
                                        gACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGaa                                                  >  1:2575636/1‑93 (MQ=255)
                                         aCTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAat                                                 >  2:2694861/1‑93 (MQ=255)
                                          cTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAata                                                >  1:5192429/1‑93 (MQ=255)
                                           tGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAatat                                               <  1:4599593/93‑1 (MQ=255)
                                           tGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAatat                                               >  1:3936443/1‑93 (MQ=255)
                                            gCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAtc                                              >  2:2434118/1‑93 (MQ=255)
                                            gCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAtc                                              >  2:6500742/1‑93 (MQ=255)
                                            gCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAtc                                              <  1:6034305/93‑1 (MQ=255)
                                            gCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAtc                                              >  2:2948797/1‑93 (MQ=255)
                                             ccAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAatatat                                             >  1:1934781/1‑91 (MQ=255)
                                             ccAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAtct                                             <  2:1642173/93‑1 (MQ=255)
                                              cAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAtctc                                            <  2:81930/93‑1 (MQ=255)
                                              cAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAtctc                                            <  2:1754727/93‑1 (MQ=255)
                                              cAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAtctc                                            >  2:1014383/1‑93 (MQ=255)
                                               aaTACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTcc                                           >  2:7691232/1‑93 (MQ=255)
                                               aaTACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTcc                                           <  1:401791/93‑1 (MQ=255)
                                                    cGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCAc                                      >  2:2162680/1‑93 (MQ=255)
                                                    cGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCAc                                      >  1:2259894/1‑93 (MQ=255)
                                                     gATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCAcc                                     >  2:6724564/1‑93 (MQ=255)
                                                      aTTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCg                                    >  1:3287989/1‑93 (MQ=255)
                                                      aTTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCg                                    <  1:6342790/93‑1 (MQ=255)
                                                      aTTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCg                                    >  2:1474703/1‑93 (MQ=255)
                                                       ttGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgt                                   <  2:5564487/93‑1 (MQ=255)
                                                           gcCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtgggt                               >  2:1587372/1‑93 (MQ=255)
                                                            ccAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtgggtg                              >  2:2076544/1‑93 (MQ=255)
                                                             cAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtgggtgg                             <  2:3605858/93‑1 (MQ=255)
                                                              aaaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGa                            <  2:2364261/93‑1 (MQ=255)
                                                              aaaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGa                            <  1:1814993/93‑1 (MQ=255)
                                                              aaaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGGGGa                            >  1:3661801/1‑93 (MQ=255)
                                                              aaaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGGTGTCCGGAATATCTCCGGCACCGTGGGTGGa                            >  2:6978601/1‑93 (MQ=255)
                                                               aaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAg                           <  2:2865023/93‑1 (MQ=255)
                                                                 gCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCt                         <  2:717443/93‑1 (MQ=255)
                                                                   ggACTGCAGAAAGATCGGGCTTCCGTTCCTGCATTGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGa                       <  1:7631142/93‑1 (MQ=255)
                                                                    gACTGCAGAAAGATCAGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGAt                      >  1:3832759/1‑93 (MQ=255)
                                                                      cTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATaa                    <  1:3418216/93‑1 (MQ=255)
                                                                       tGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAc                   >  2:62910/1‑93 (MQ=255)
                                                                       tGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAc                   <  1:532181/93‑1 (MQ=255)
                                                                        gCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAcc                  >  1:7729095/1‑93 (MQ=255)
                                                                          aGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAccag                >  2:3959116/1‑93 (MQ=255)
                                                                          aGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAccag                >  1:3041295/1‑93 (MQ=255)
                                                                            aaaGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAccagcc              <  2:1973179/93‑1 (MQ=255)
                                                                            aaaGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAccagcc              >  1:3528626/1‑93 (MQ=255)
                                                                              aGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAccagccag            >  1:27662/1‑93 (MQ=255)
                                                                               gATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGa           >  1:2869606/1‑93 (MQ=255)
                                                                                   gggCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATccc       >  1:4819500/1‑93 (MQ=255)
                                                                                   gggCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATccc       <  1:6613539/93‑1 (MQ=255)
                                                                                    ggCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCt      <  2:1416053/93‑1 (MQ=255)
                                                                                     gCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTg     >  2:3462063/1‑93 (MQ=255)
                                                                                     gCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTg     <  1:7506447/93‑1 (MQ=255)
                                                                                      cTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGa    <  2:4060188/93‑1 (MQ=255)
                                                                                      cTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGa    <  2:6827319/93‑1 (MQ=255)
                                                                                      cTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGa    <  1:2952885/93‑1 (MQ=255)
                                                                                          |                                                                                          
TCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGG  >  NC_000913/3923767‑3923947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 241 total aligned reads displayed.
GCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAG  >  NC_000913/3923764‑3923950
                                                                                             |                                                                                             
GCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCC                                                                                               <  SRR4302543.1137190/94‑1 (MQ=60)
   TCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTT                                                                                            >  SRR4302543.2649563/1‑94 (MQ=60)
    CGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTC                                                                                           <  SRR4302543.6672673/94‑1 (MQ=60)
     GAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCC                                                                                          <  SRR4302543.1150195/94‑1 (MQ=60)
     GAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCC                                                                                          >  SRR4302543.1693951/1‑94 (MQ=60)
      AGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCT                                                                                         <  SRR4302543.2746293/94‑1 (MQ=60)
       GTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTG                                                                                        <  SRR4302543.5139385/94‑1 (MQ=60)
         TTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCA                                                                                      >  SRR4302543.4480588/1‑94 (MQ=60)
         TTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCA                                                                                      >  SRR4302543.4566624/1‑94 (MQ=60)
         TTATCGATAGCCCCACAAAAGGTATCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCA                                                                                      >  SRR4302543.1857633/1‑94 (MQ=60)
          TATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAA                                                                                     >  SRR4302543.3637678/1‑94 (MQ=60)
           ATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAAT                                                                                    <  SRR4302543.2744820/94‑1 (MQ=60)
           ATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAAT                                                                                    <  SRR4302543.2229969/94‑1 (MQ=60)
           ATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAAT                                                                                    >  SRR4302543.7443370/1‑94 (MQ=60)
           ATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAAT                                                                                    >  SRR4302543.534990/1‑94 (MQ=60)
           ATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAAT                                                                                    <  SRR4302543.4823823/94‑1 (MQ=60)
           ATCGATAGCCCCACAAAAGGAGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTGCCGTTCCTGCAAT                                                                                    >  SRR4302543.7059452/1‑94 (MQ=60)
            TCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATG                                                                                   <  SRR4302543.4788537/94‑1 (MQ=60)
            TCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATG                                                                                   <  SRR4302543.6951685/94‑1 (MQ=60)
            TCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGAAGAAAGATCGGGCTTCCGTTCCTGCAATG                                                                                   <  SRR4302543.1886312/94‑1 (MQ=60)
              GATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCT                                                                                 >  SRR4302543.2626419/1‑94 (MQ=60)
              GATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCT                                                                                 <  SRR4302543.744705/94‑1 (MQ=60)
              GATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCT                                                                                 <  SRR4302543.5743172/94‑1 (MQ=60)
              GATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCT                                                                                 >  SRR4302543.1942995/1‑94 (MQ=60)
               ATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGTGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTT                                                                                >  SRR4302543.279892/1‑94 (MQ=60)
                AAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTC                                                                               <  SRR4302543.5744477/94‑1 (MQ=60)
                 AGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCA                                                                              >  SRR4302543.3973156/1‑94 (MQ=60)
                 AGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCA                                                                              <  SRR4302543.2459181/94‑1 (MQ=60)
                  GCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCAT                                                                             <  SRR4302543.7659198/94‑1 (MQ=60)
                  GCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCAT                                                                             <  SRR4302543.6863158/94‑1 (MQ=60)
                  GCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCAT                                                                             <  SRR4302543.7182813/94‑1 (MQ=60)
                   CCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATA                                                                            <  SRR4302543.812557/94‑1 (MQ=60)
                   CCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATA                                                                            >  SRR4302543.5166641/1‑94 (MQ=60)
                   CCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATA                                                                            <  SRR4302543.6944547/94‑1 (MQ=60)
                   CCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATA                                                                            <  SRR4302543.4923897/94‑1 (MQ=60)
                   CCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATA                                                                            <  SRR4302543.812558/94‑1 (MQ=60)
                   CCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATA                                                                            >  SRR4302543.3264640/1‑94 (MQ=60)
                    CCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAG                                                                           <  SRR4302543.3854850/94‑1 (MQ=60)
                    CCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAG                                                                           <  SRR4302543.3320784/94‑1 (MQ=60)
                     CCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGA                                                                          >  SRR4302543.5225408/1‑94 (MQ=60)
                     CCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGA                                                                          <  SRR4302543.5605245/94‑1 (MQ=60)
                     CCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGA                                                                          <  SRR4302543.6879678/94‑1 (MQ=60)
                     CCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGA                                                                          <  SRR4302543.4674933/94‑1 (MQ=60)
                     CCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGA                                                                          <  SRR4302543.7045317/94‑1 (MQ=60)
                      NNNAAAANGNGTCATATTCANNNNTNCCAATACCGATTGCGCCAAAGNGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAA                                                                         <  SRR4302543.2163149/94‑1 (MQ=60)
                      CACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAA                                                                         <  SRR4302543.2824982/94‑1 (MQ=60)
                       ACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAA                                                                        >  SRR4302543.3120364/1‑94 (MQ=60)
                       ACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAA                                                                        >  SRR4302543.2867047/1‑94 (MQ=60)
                       ACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAA                                                                        >  SRR4302543.7877163/1‑94 (MQ=60)
                        CAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAG                                                                       <  SRR4302543.3170948/94‑1 (MQ=60)
                        CAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAG                                                                       >  SRR4302543.5068746/1‑94 (MQ=60)
                        CAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAG                                                                       <  SRR4302543.1093077/94‑1 (MQ=60)
                        CAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAG                                                                       <  SRR4302543.1570791/94‑1 (MQ=60)
                        CAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAG                                                                       <  SRR4302543.3713558/94‑1 (MQ=60)
                         AAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGG                                                                      <  SRR4302543.4664380/94‑1 (MQ=60)
                         AAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGG                                                                      <  SRR4302543.4300087/94‑1 (MQ=60)
                         AAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGG                                                                      >  SRR4302543.1977879/1‑94 (MQ=60)
                          AAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGA                                                                     <  SRR4302543.1450100/94‑1 (MQ=60)
                          AAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGA                                                                     >  SRR4302543.3954346/1‑94 (MQ=60)
                          AAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGA                                                                     >  SRR4302543.3954347/1‑94 (MQ=60)
                          AAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGA                                                                     <  SRR4302543.4000768/94‑1 (MQ=60)
                           AAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAG                                                                    >  SRR4302543.1914266/1‑94 (MQ=60)
                            AGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGA                                                                   >  SRR4302543.6601277/1‑94 (MQ=60)
                             GGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAA                                                                  <  SRR4302543.2604266/94‑1 (MQ=60)
                             GGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAA                                                                  >  SRR4302543.3026221/1‑94 (MQ=60)
                             GGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAA                                                                  >  SRR4302543.905018/1‑94 (MQ=60)
                              GTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAA                                                                 >  SRR4302543.3777372/1‑94 (MQ=60)
                               TGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAG                                                                >  SRR4302543.6945351/1‑94 (MQ=60)
                                GTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGG                                                               >  SRR4302543.5094887/1‑94 (MQ=60)
                                GTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGG                                                               >  SRR4302543.4002554/1‑94 (MQ=60)
                                GTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGG                                                               <  SRR4302543.1057291/94‑1 (MQ=60)
                                 TCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGT                                                              <  SRR4302543.6363345/94‑1 (MQ=60)
                                 TCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGT                                                              >  SRR4302543.7277757/1‑94 (MQ=60)
                                 TCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGT                                                              <  SRR4302543.3184499/94‑1 (MQ=60)
                                 TCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGT                                                              <  SRR4302543.585879/94‑1 (MQ=60)
                                 TCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGT                                                              <  SRR4302543.3330517/94‑1 (MQ=60)
                                  CATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTT                                                             >  SRR4302543.5626679/1‑94 (MQ=60)
                                  CATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTT                                                             >  SRR4302543.7546776/1‑94 (MQ=60)
                                   ATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTG                                                            <  SRR4302543.7710666/94‑1 (MQ=60)
                                   ATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTG                                                            >  SRR4302543.6526219/1‑94 (MQ=60)
                                   ATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTG                                                            <  SRR4302543.7710667/94‑1 (MQ=60)
                                   ATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTG                                                            <  SRR4302543.4990273/94‑1 (MQ=60)
                                   ATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTG                                                            >  SRR4302543.3379789/1‑94 (MQ=60)
                                   ATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTG                                                            >  SRR4302543.3929387/1‑94 (MQ=60)
                                    TATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGT                                                           >  SRR4302543.4235534/1‑94 (MQ=60)
                                     ATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTC                                                          <  SRR4302543.5355010/94‑1 (MQ=60)
                                     ATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTC                                                          >  SRR4302543.7914602/1‑94 (MQ=60)
                                      TTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCC                                                         >  SRR4302543.1025794/1‑94 (MQ=60)
                                      TTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCC                                                         >  SRR4302543.4298871/1‑94 (MQ=60)
                                      TTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCC                                                         >  SRR4302543.899029/1‑94 (MQ=60)
                                        CACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGG                                                       <  SRR4302543.1039218/94‑1 (MQ=60)
                                        CACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGG                                                       >  SRR4302543.3961447/1‑94 (MQ=60)
                                        CACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGG                                                       <  SRR4302543.2896764/94‑1 (MQ=60)
                                         ACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGA                                                      <  SRR4302543.1216378/94‑1 (MQ=60)
                                          CGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGATAGGTTGTCCGGAA                                                     >  SRR4302543.5629413/1‑94 (MQ=60)
                                          CGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAA                                                     >  SRR4302543.7585285/1‑94 (MQ=60)
                                          CGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAA                                                     >  SRR4302543.2599111/1‑94 (MQ=60)
                                          CGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAA                                                     >  SRR4302543.3038781/1‑94 (MQ=60)
                                           GACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAAT                                                    <  SRR4302543.3157659/94‑1 (MQ=60)
                                           GACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAAT                                                    <  SRR4302543.3159/94‑1 (MQ=60)
                                           GACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAAT                                                    <  SRR4302543.3694893/94‑1 (MQ=60)
                                            ACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATA                                                   >  SRR4302543.934718/1‑94 (MQ=60)
                                            ACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATA                                                   <  SRR4302543.1421176/94‑1 (MQ=60)
                                            ACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATA                                                   <  SRR4302543.7299872/94‑1 (MQ=60)
                                             CTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAT                                                  >  SRR4302543.3971229/1‑94 (MQ=60)
                                             CTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAT                                                  <  SRR4302543.6686140/94‑1 (MQ=60)
                                             CTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAT                                                  >  SRR4302543.3971227/1‑94 (MQ=60)
                                             CTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGAGCGGGCCTCCGTTCCTGCAATGCTTGATCGAAAGGAGAAAGGTTGTCCGGAATAT                                                  >  SRR4302543.3971226/1‑94 (MQ=60)
                                              TGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATC                                                 >  SRR4302543.4111967/1‑94 (MQ=60)
                                              TGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATC                                                 >  SRR4302543.6085204/1‑94 (MQ=60)
                                                CCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTC                                               >  SRR4302543.1917852/1‑94 (MQ=60)
                                                CCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTC                                               >  SRR4302543.3039295/1‑94 (MQ=60)
                                                CCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTC                                               >  SRR4302543.373795/1‑94 (MQ=60)
                                                 CAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCC                                              <  SRR4302543.366092/94‑1 (MQ=60)
                                                 CAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCC                                              <  SRR4302543.7994575/94‑1 (MQ=60)
                                                 CAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCC                                              <  SRR4302543.7476883/94‑1 (MQ=60)
                                                 CAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCC                                              <  SRR4302543.165108/94‑1 (MQ=60)
                                                  AATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCG                                             <  SRR4302543.405499/94‑1 (MQ=60)
                                                  AATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCG                                             <  SRR4302543.1593622/94‑1 (MQ=60)
                                                   ATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGG                                            >  SRR4302543.6611512/1‑94 (MQ=60)
                                                   ATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGG                                            >  SRR4302543.7547711/1‑94 (MQ=60)
                                                     ACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCA                                          >  SRR4302543.589917/1‑94 (MQ=60)
                                                     ACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGATTCATAGAAAGGAGAAAGGTCGTCGGGAATATCTCgggcc                                          >  SRR4302543.2639130/1‑89 (MQ=60)
                                                      CCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCAC                                         >  SRR4302543.2280493/1‑94 (MQ=60)
                                                        GATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCG                                       >  SRR4302543.3317660/1‑94 (MQ=60)
                                                        GATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCG                                       >  SRR4302543.2389048/1‑94 (MQ=60)
                                                         ATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGT                                      <  SRR4302543.6402433/94‑1 (MQ=60)
                                                         ATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGT                                      <  SRR4302543.662381/94‑1 (MQ=60)
                                                          TTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTG                                     <  SRR4302543.6553138/94‑1 (MQ=60)
                                                           TGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGG                                    <  SRR4302543.1776055/94‑1 (MQ=60)
                                                           TGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGG                                    >  SRR4302543.7172678/1‑94 (MQ=60)
                                                           TGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGG                                    <  SRR4302543.6557804/94‑1 (MQ=60)
                                                           TGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGG                                    <  SRR4302543.4575920/94‑1 (MQ=60)
                                                            GCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGG                                   <  SRR4302543.7850123/94‑1 (MQ=60)
                                                             CGCCAAAGCGGACTGCAGAAAGATCGGGCTTTCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGT                                  <  SRR4302543.2118531/94‑1 (MQ=60)
                                                             CGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGT                                  >  SRR4302543.3525413/1‑94 (MQ=60)
                                                             CGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGT                                  <  SRR4302543.2924569/94‑1 (MQ=60)
                                                             CGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGT                                  <  SRR4302543.4896026/94‑1 (MQ=60)
                                                             CGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGT                                  <  SRR4302543.1007509/94‑1 (MQ=60)
                                                              GCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTG                                 <  SRR4302543.4774417/94‑1 (MQ=60)
                                                              GCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTG                                 <  SRR4302543.1112500/94‑1 (MQ=60)
                                                               CCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGG                                <  SRR4302543.4616605/94‑1 (MQ=60)
                                                               CCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGG                                <  SRR4302543.34650/94‑1 (MQ=60)
                                                                CAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGCAAGGAGAAAGGTTGTCCGGAATATCTCCGctcccccgggcgga                               >  SRR4302543.829750/1‑80 (MQ=60)
                                                                CAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGA                               >  SRR4302543.829749/1‑94 (MQ=60)
                                                                CAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGGGGA                               >  SRR4302543.3693959/1‑94 (MQ=60)
                                                                 AAATCGGACTGGAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAG                              <  SRR4302543.1831276/94‑1 (MQ=60)
                                                                 AAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAG                              <  SRR4302543.1831275/94‑1 (MQ=60)
                                                                 AAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAG                              <  SRR4302543.4458730/94‑1 (MQ=60)
                                                                  AAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGC                             >  SRR4302543.6316804/1‑94 (MQ=60)
                                                                  AAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGC                             <  SRR4302543.5976103/94‑1 (MQ=60)
                                                                   AGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCT                            <  SRR4302543.1511993/94‑1 (MQ=60)
                                                                      GGACTGCAGAAAGATCGGGCTTCCGTTCCTGCATTGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGAT                         <  SRR4302543.7703556/94‑1 (MQ=60)
                                                                      GGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGAT                         <  SRR4302543.7703558/94‑1 (MQ=60)
                                                                      GGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGAA                         >  SRR4302543.1611571/1‑94 (MQ=60)
                                                                      GGACTGCAGAAAGATCAGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGAT                         >  SRR4302543.3866569/1‑94 (MQ=60)
                                                                       GACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATA                        >  SRR4302543.3905307/1‑94 (MQ=60)
                                                                         CTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAC                      >  SRR4302543.1514092/1‑94 (MQ=60)
                                                                         CTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAC                      >  SRR4302543.6846673/1‑94 (MQ=60)
                                                                         CTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAC                      <  SRR4302543.3448811/94‑1 (MQ=60)
                                                                          TGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACC                     <  SRR4302543.4835692/94‑1 (MQ=60)
                                                                          TGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACC                     <  SRR4302543.537111/94‑1 (MQ=60)
                                                                           GCAGAAAGATCGGTCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATCTCTCCGGCACCGTGGGTGGAGCTGATAACCA                    <  SRR4302543.5044712/94‑1 (MQ=60)
                                                                            CAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAG                   >  SRR4302543.3068724/1‑94 (MQ=60)
                                                                            CAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAG                   >  SRR4302543.1778733/1‑94 (MQ=60)
                                                                             AGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGC                  >  SRR4302543.5286288/1‑94 (MQ=60)
                                                                             AGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGC                  >  SRR4302543.6486115/1‑94 (MQ=60)
                                                                             AGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGC                  >  SRR4302543.6486116/1‑94 (MQ=60)
                                                                             AGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGC                  >  SRR4302543.6649525/1‑94 (MQ=60)
                                                                             AGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGC                  >  SRR4302543.673940/1‑94 (MQ=60)
                                                                              GAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC                 <  SRR4302543.1434283/94‑1 (MQ=60)
                                                                              GAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC                 <  SRR4302543.2897143/94‑1 (MQ=60)
                                                                              GAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC                 <  SRR4302543.6962633/94‑1 (MQ=60)
                                                                              GAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC                 >  SRR4302543.3560067/1‑94 (MQ=60)
                                                                               AAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCA                >  SRR4302543.10476/1‑94 (MQ=60)
                                                                                AAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAG               >  SRR4302543.27912/1‑94 (MQ=60)
                                                                                 AGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGA              >  SRR4302543.4041416/1‑94 (MQ=60)
                                                                                 AGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGA              >  SRR4302543.2895744/1‑94 (MQ=60)
                                                                                  GATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTTGAGCTGATAACCAGCCAGAT             >  SRR4302543.7898465/1‑94 (MQ=60)
                                                                                  GATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGAT             >  SRR4302543.7898464/1‑94 (MQ=60)
                                                                                  AATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGAT             <  SRR4302543.6128896/94‑1 (MQ=60)
                                                                                     CGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCC          >  SRR4302543.4863504/1‑94 (MQ=60)
                                                                                     CGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCC          >  SRR4302543.4863506/1‑94 (MQ=60)
                                                                                      GGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCT         >  SRR4302543.473622/1‑94 (MQ=60)
                                                                                      GGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCT         <  SRR4302543.6171332/94‑1 (MQ=60)
                                                                                       GGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTG        >  SRR4302543.5750646/1‑94 (MQ=60)
                                                                                        GCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGA       >  SRR4302543.5729965/1‑94 (MQ=60)
                                                                                        GCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGA       <  SRR4302543.7578192/94‑1 (MQ=60)
                                                                                        GCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGA       <  SRR4302543.7380682/94‑1 (MQ=60)
                                                                                         CTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAG      >  SRR4302543.3534638/1‑94 (MQ=60)
                                                                                         CTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAG      <  SRR4302543.232868/94‑1 (MQ=60)
                                                                                         CTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAG      >  SRR4302543.1931044/1‑94 (MQ=60)
                                                                                         CTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAG      <  SRR4302543.3791719/94‑1 (MQ=60)
                                                                                           TCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGC    <  SRR4302543.5224476/94‑1 (MQ=60)
                                                                                           TCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGC    >  SRR4302543.7160471/1‑94 (MQ=60)
                                                                                            CCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGGGCTGATAACCAGCCAGATGCCTGAGGCA   >  SRR4302543.4226035/1‑94 (MQ=60)
                                                                                            CCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCA   >  SRR4302543.4226036/1‑94 (MQ=60)
                                                                                            CCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCA   >  SRR4302543.3815637/1‑94 (MQ=60)
                                                                                            CCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCA   <  SRR4302543.884477/94‑1 (MQ=60)
                                                                                             CGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAG  >  SRR4302543.26639/1‑94 (MQ=60)
                                                                                             |                                                                                             
GCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAG  >  NC_000913/3923764‑3923950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑