Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,934,842 C→T intergenic (+48/‑78) rbsB → / → rbsK D‑ribose periplasmic binding protein/ribokinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,934,8420CT99.8% 1530.3 / ‑5.8 414intergenic (+48/‑78)rbsB/rbsKD‑ribose periplasmic binding protein/ribokinase
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base T (191/222);  total (192/222)
Fisher's exact test for biased strand distribution p-value = 4.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.38e-01

Only 100 of 420 total aligned reads displayed.

GGCTAAGTATCCGGTTGATCTGAAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGACAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCA  >  NC_000913/3934752‑3934931
                                                                                          |                                                                                         
ggCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAg                                                                                         >  2:5202377/1‑93 (MQ=255)
ggCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAg                                                                                         >  2:7347361/1‑93 (MQ=255)
 gCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGa                                                                                        <  1:1975534/93‑1 (MQ=255)
  cTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGAt                                                                                       <  2:2920306/93‑1 (MQ=255)
   tAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATg                                                                                      <  2:1858443/93‑1 (MQ=255)
   tAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATg                                                                                      >  1:1260007/1‑93 (MQ=255)
    aaGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGa                                                                                     >  1:7078756/1‑93 (MQ=255)
    aaGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGa                                                                                     <  2:5262527/93‑1 (MQ=255)
     aGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATgga                                                                                    <  2:4375759/93‑3 (MQ=255)
     aGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGaa                                                                                    >  2:5488042/1‑93 (MQ=255)
      gTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAAc                                                                                   <  1:6930351/93‑1 (MQ=255)
      gTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAAc                                                                                   >  2:7181320/1‑93 (MQ=255)
      gTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAAc                                                                                   <  2:2324550/93‑1 (MQ=255)
      gTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAAc                                                                                   <  2:6863719/93‑1 (MQ=255)
       tATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACg                                                                                  >  2:6552399/1‑93 (MQ=255)
        aTCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACgt                                                                                 <  2:150172/93‑1 (MQ=255)
         tCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACgtg                                                                                <  2:3129255/93‑1 (MQ=255)
          ccGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACgtgt                                                                               <  2:1608301/93‑1 (MQ=255)
           cGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTa                                                                              >  1:1763849/1‑93 (MQ=255)
             gTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATCAATACGTCATCGATAGATGAACGTGTAat                                                                            >  2:179362/1‑93 (MQ=255)
             gTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAat                                                                            <  1:1005116/93‑1 (MQ=255)
             gTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAat                                                                            >  1:7202181/1‑93 (MQ=255)
              ttGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAata                                                                           <  2:1127476/93‑1 (MQ=255)
              ttGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAata                                                                           <  2:4842264/93‑1 (MQ=255)
                gATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAAtata                                                                         <  2:6176864/93‑1 (MQ=255)
                 aTCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATaa                                                                        <  2:7533581/93‑1 (MQ=255)
                 aTCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATaa                                                                        >  1:5703129/1‑93 (MQ=255)
                  tCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATaaa                                                                       >  1:6369560/1‑93 (MQ=255)
                   cTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAg                                                                      >  2:2443724/1‑93 (MQ=255)
                   cTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAg                                                                      <  1:86208/93‑1 (MQ=255)
                    tggaaCTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGa                                                                     >  1:4185355/4‑93 (MQ=255)
                    tggaaCTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGa                                                                     >  2:5037199/4‑93 (MQ=255)
                    tggaaCTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGa                                                                     <  2:2241552/90‑1 (MQ=255)
                    tggaaCTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGa                                                                     <  2:4334465/90‑1 (MQ=255)
                      gatcTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGaaa                                                                   <  1:5930351/90‑1 (MQ=255)
                      gaaCTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGaaa                                                                   >  1:7765254/2‑93 (MQ=255)
                      gaaCTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGaaa                                                                   <  1:2926984/92‑1 (MQ=255)
                       aaCTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGaaaa                                                                  <  1:4253649/93‑1 (MQ=255)
                       aaCTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGaaaa                                                                  <  2:4791180/93‑1 (MQ=255)
                       aaCTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGaaaa                                                                  <  1:2777134/93‑1 (MQ=255)
                       aaCTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGaaaa                                                                  <  1:2371763/93‑1 (MQ=255)
                       aaCTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGaaaa                                                                  <  1:2304915/93‑1 (MQ=255)
                          tGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCa                                                               <  2:422440/93‑1 (MQ=255)
                          tGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCa                                                               <  1:7247707/93‑1 (MQ=255)
                          tGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCa                                                               >  1:6750612/1‑93 (MQ=255)
                          tGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCa                                                               >  1:6137746/1‑93 (MQ=255)
                          tGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCa                                                               >  1:5338787/1‑93 (MQ=255)
                           ggTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAg                                                              <  2:7698355/93‑1 (MQ=255)
                             ttgttAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAggg                                                            <  1:7651464/93‑1 (MQ=255)
                             ttgttAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAggg                                                            >  2:3555467/1‑93 (MQ=255)
                             ttgttAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAggg                                                            <  1:1069802/93‑1 (MQ=255)
                             ttgttAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAACATAAAGAAAAGCAggg                                                            <  1:3402677/93‑1 (MQ=255)
                             ttgttAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGACAGATGAACGTGTAATATAAAGAAAAGCAggg                                                            >  1:1404096/1‑93 (MQ=255)
                               gttAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCa                                                          >  1:4745301/1‑93 (MQ=255)
                                ttAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCAc                                                         <  2:7858097/93‑1 (MQ=255)
                                 tAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCAcg                                                        <  2:5580059/93‑1 (MQ=255)
                                 tAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCAcg                                                        <  2:3806557/93‑1 (MQ=255)
                                  aaGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCAcgc                                                       <  1:3777110/93‑1 (MQ=255)
                                   aGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCAcgcg                                                      >  1:4994272/1‑93 (MQ=255)
                                   aGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCAcgcc                                                      >  1:3915055/1‑92 (MQ=255)
                                    gCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACgcgc                                                     >  1:3600011/1‑93 (MQ=255)
                                    gCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACgcgc                                                     >  2:5831026/1‑93 (MQ=255)
                                         agtTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCAccc                                                <  2:5731518/93‑1 (MQ=255)
                                          gtTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCt                                               >  1:620539/1‑93 (MQ=255)
                                           ttttAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTa                                              <  1:5048751/93‑1 (MQ=255)
                                            tttAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTaa                                             >  2:1008232/1‑93 (MQ=255)
                                            tttAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCCaa                                             >  2:3264382/1‑93 (MQ=255)
                                                 tCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACgg                                        <  1:4477758/93‑1 (MQ=255)
                                                  cAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGt                                       <  2:3957810/93‑1 (MQ=255)
                                                    ggTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTgg                                     <  2:858557/93‑1 (MQ=255)
                                                     gTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGACCGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGgc                                    >  1:5414870/1‑93 (MQ=255)
                                                      ttGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTTACACGGTGgcg                                   >  2:4153303/1‑93 (MQ=255)
                                                      ttGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTCACACGGGGgcc                                   >  2:2052104/1‑92 (MQ=255)
                                                         tATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGGGGCGCAt                                >  1:7283808/1‑93 (MQ=255)
                                                          aTGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCAtt                               <  2:6421511/93‑1 (MQ=255)
                                                           tGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCAttt                              <  2:749041/93‑1 (MQ=255)
                                                            gACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCAtttt                             >  1:6555580/1‑93 (MQ=255)
                                                               cttaTGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATg                          <  2:6795679/90‑1 (MQ=255)
                                                                tGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGGCACCCTAACACGGGGGGGGCTTTTTTgg                         >  1:1956532/1‑93 (MQ=255)
                                                                tGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATgg                         >  2:5926544/1‑93 (MQ=255)
                                                                  aTGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGAc                       <  1:3569543/93‑1 (MQ=255)
                                                                   tGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACa                      <  1:3227258/93‑1 (MQ=255)
                                                                     gTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATc                    <  2:6349495/93‑1 (MQ=255)
                                                                     gTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATc                    <  1:211743/93‑1 (MQ=255)
                                                                      tGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATcc                   <  1:2510293/93‑1 (MQ=255)
                                                                       gACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATccc                  <  2:1346307/93‑1 (MQ=255)
                                                                         cATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCCTTTTTTTGACATCCCGa                >  2:6217308/1‑93 (MQ=255)
                                                                          aTAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGaa               >  2:2146172/1‑93 (MQ=255)
                                                                           tAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAat              >  1:7435393/1‑93 (MQ=255)
                                                                           tAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAat              <  1:733959/93‑1 (MQ=255)
                                                                           tAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAat              >  1:3512245/1‑93 (MQ=255)
                                                                            aaaTACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAata             <  1:5507335/93‑1 (MQ=255)
                                                                            aaaTACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAata             <  2:2667763/93‑1 (MQ=255)
                                                                             aaTACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAatat            <  2:2525824/93‑1 (MQ=255)
                                                                               tACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGc          >  1:4055856/1‑93 (MQ=255)
                                                                               tACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGc          >  2:4015071/1‑93 (MQ=255)
                                                                                     aTCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGGTCCTCCCTAACACGGTGGCTCATTTTATGGACATCCCGAATATGCAAAACg    <  2:676243/93‑1 (MQ=255)
                                                                                      tCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTCACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACgc   >  2:3459722/1‑93 (MQ=255)
                                                                                       cGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACgca  <  1:6039550/93‑1 (MQ=255)
                                                                                       cGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACgca  <  2:5156701/93‑1 (MQ=255)
                                                                                          |                                                                                         
GGCTAAGTATCCGGTTGATCTGAAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGACAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCA  >  NC_000913/3934752‑3934931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 223 total aligned reads displayed.
TCAGGCTAAGTATCCGGTTGATCTGAAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGACAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAGGCA  >  NC_000913/3934749‑3934935
                                                                                             |                                                                                             
TCAGGCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTTACATAAATACGTCATCGAT                                                                                               <  SRR4302543.2648133/94‑1 (MQ=60)
TCAGGCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGAT                                                                                               <  SRR4302543.5061543/94‑1 (MQ=60)
TCAGGCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGAT                                                                                               <  SRR4302543.5226430/94‑1 (MQ=60)
 CAGGCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATA                                                                                              >  SRR4302543.5750477/1‑94 (MQ=60)
 CAGGCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATA                                                                                              >  SRR4302543.6672469/1‑94 (MQ=60)
  AGGCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAG                                                                                             <  SRR4302543.2488612/94‑1 (MQ=60)
  AGGCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAG                                                                                             >  SRR4302543.2538439/1‑94 (MQ=60)
  AGGCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAG                                                                                             >  SRR4302543.5533720/1‑94 (MQ=60)
  AGGCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAG                                                                                             >  SRR4302543.7159397/1‑94 (MQ=60)
    GCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGAT                                                                                           <  SRR4302543.5692418/94‑1 (MQ=60)
    GCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGAT                                                                                           <  SRR4302543.7408265/94‑1 (MQ=60)
    GCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGAT                                                                                           >  SRR4302543.593946/1‑94 (MQ=60)
    GCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGAT                                                                                           <  SRR4302543.1993247/94‑1 (MQ=60)
    GCTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGAT                                                                                           >  SRR4302543.3608098/1‑94 (MQ=60)
     CTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATG                                                                                          <  SRR4302543.2326283/94‑1 (MQ=60)
     CTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATG                                                                                          >  SRR4302543.6315864/1‑94 (MQ=60)
     CTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATG                                                                                          >  SRR4302543.4260749/1‑94 (MQ=60)
     CTAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATG                                                                                          >  SRR4302543.1270996/1‑94 (MQ=60)
      TAAGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGA                                                                                         >  SRR4302543.7147499/1‑94 (MQ=60)
        AGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAAC                                                                                       <  SRR4302543.3152143/94‑1 (MQ=60)
        AGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAAC                                                                                       <  SRR4302543.3152142/94‑1 (MQ=60)
        AGTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAAC                                                                                       >  SRR4302543.6944694/1‑94 (MQ=60)
         GTATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACG                                                                                      <  SRR4302543.6995539/94‑1 (MQ=60)
           ATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTG                                                                                    <  SRR4302543.3133323/94‑1 (MQ=60)
           ATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTG                                                                                    <  SRR4302543.2394108/94‑1 (MQ=60)
           ATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTG                                                                                    <  SRR4302543.398460/94‑1 (MQ=60)
           ATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTG                                                                                    >  SRR4302543.1950903/1‑94 (MQ=60)
           ATCCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTG                                                                                    >  SRR4302543.7173643/1‑94 (MQ=60)
             CCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTA                                                                                  >  SRR4302543.1779617/1‑94 (MQ=60)
             CCGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTA                                                                                  >  SRR4302543.4625000/1‑94 (MQ=60)
              CGGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAA                                                                                 >  SRR4302543.4028348/1‑94 (MQ=60)
               GGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAAT                                                                                >  SRR4302543.1642596/1‑94 (MQ=60)
               GGTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAAT                                                                                >  SRR4302543.7272008/1‑94 (MQ=60)
                GTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATA                                                                               <  SRR4302543.4214996/94‑1 (MQ=60)
                GTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATA                                                                               <  SRR4302543.1014006/94‑1 (MQ=60)
                GTTGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATA                                                                               <  SRR4302543.1060327/94‑1 (MQ=60)
                 TTGATCTGGAACTGGTTGTTAAGCAGTAGTTTAAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATAT                                                                              <  SRR4302543.7835728/94‑1 (MQ=60)
                  TGATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACATGTAATATA                                                                             >  SRR4302543.2908927/1‑94 (MQ=60)
                   GATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAA                                                                            >  SRR4302543.5755145/1‑94 (MQ=60)
                   GATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAA                                                                            >  SRR4302543.4438814/1‑94 (MQ=60)
                    ATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAA                                                                           >  SRR4302543.1281674/1‑94 (MQ=60)
                    ATCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAA                                                                           >  SRR4302543.6429468/1‑94 (MQ=60)
                     TCTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAG                                                                          <  SRR4302543.6330581/94‑1 (MQ=60)
                      CTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGA                                                                         <  SRR4302543.3977673/94‑1 (MQ=60)
                      CTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGA                                                                         >  SRR4302543.3329310/1‑94 (MQ=60)
                      CTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGA                                                                         >  SRR4302543.4223296/1‑94 (MQ=60)
                      CTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGA                                                                         >  SRR4302543.354562/1‑94 (MQ=60)
                      CTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGA                                                                         >  SRR4302543.3787291/1‑94 (MQ=60)
                      CTGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGA                                                                         <  SRR4302543.87003/94‑1 (MQ=60)
                       TGGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAA                                                                        <  SRR4302543.4279224/94‑1 (MQ=60)
                        GGAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAA                                                                       >  SRR4302543.7838531/1‑94 (MQ=60)
                         gatCTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAA                                                                      <  SRR4302543.5984574/91‑1 (MQ=60)
                         GAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAA                                                                      <  SRR4302543.2770715/94‑1 (MQ=60)
                         GAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAA                                                                      >  SRR4302543.3490737/1‑94 (MQ=60)
                          GACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAG                                                                     <  SRR4302543.4671347/94‑1 (MQ=60)
                          AACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAG                                                                     <  SRR4302543.6231748/94‑1 (MQ=60)
                          AACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAG                                                                     <  SRR4302543.2325911/94‑1 (MQ=60)
                          AACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAG                                                                     <  SRR4302543.2393257/94‑1 (MQ=60)
                          AACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAG                                                                     <  SRR4302543.2802422/94‑1 (MQ=60)
                          AACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAG                                                                     <  SRR4302543.4292260/94‑1 (MQ=60)
                           ACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGC                                                                    <  SRR4302543.5410976/94‑1 (MQ=60)
                            CTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCA                                                                   >  SRR4302543.5387077/1‑94 (MQ=60)
                            CTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCA                                                                   >  SRR4302543.6091018/1‑94 (MQ=60)
                            CTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCA                                                                   >  SRR4302543.6195886/1‑94 (MQ=60)
                            CTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCA                                                                   >  SRR4302543.6814362/1‑94 (MQ=60)
                            CTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCA                                                                   <  SRR4302543.818106/94‑1 (MQ=60)
                             TGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAG                                                                  <  SRR4302543.7317818/94‑1 (MQ=60)
                             TGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAG                                                                  <  SRR4302543.3690608/94‑1 (MQ=60)
                             TGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAG                                                                  <  SRR4302543.611520/94‑1 (MQ=60)
                             TGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAG                                                                  <  SRR4302543.6243543/94‑1 (MQ=60)
                             TGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAG                                                                  <  SRR4302543.53012/94‑1 (MQ=60)
                              GGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGG                                                                 >  SRR4302543.7367635/1‑94 (MQ=60)
                              GGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGG                                                                 <  SRR4302543.2131076/94‑1 (MQ=60)
                              GGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGG                                                                 >  SRR4302543.2423964/1‑94 (MQ=60)
                              GGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGG                                                                 >  SRR4302543.7320362/1‑94 (MQ=60)
                              GGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGG                                                                 <  SRR4302543.6545013/94‑1 (MQ=60)
                               GTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGG                                                                <  SRR4302543.6084999/94‑1 (MQ=60)
                               GTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGG                                                                <  SRR4302543.4853505/94‑1 (MQ=60)
                               GTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGG                                                                <  SRR4302543.3883135/94‑1 (MQ=60)
                               GTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGACAGATGAACGTGTAATATAAAGAAAAGCAGGG                                                                >  SRR4302543.1416771/1‑94 (MQ=60)
                                TTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGC                                                               <  SRR4302543.1079418/94‑1 (MQ=60)
                                TTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGC                                                               <  SRR4302543.2230831/94‑1 (MQ=60)
                                TTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGC                                                               <  SRR4302543.7724015/94‑1 (MQ=60)
                                GTGTTAAGCACTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGC                                                               <  SRR4302543.1079417/94‑1 (MQ=60)
                                 TGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCA                                                              <  SRR4302543.7053605/94‑1 (MQ=60)
                                 TGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCA                                                              >  SRR4302543.4788669/1‑94 (MQ=60)
                                 TGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCA                                                              <  SRR4302543.7291891/94‑1 (MQ=60)
                                 TGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCA                                                              <  SRR4302543.256092/94‑1 (MQ=60)
                                  GTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCAC                                                             >  SRR4302543.5676735/1‑94 (MQ=60)
                                  GTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCAC                                                             <  SRR4302543.7500791/94‑1 (MQ=60)
                                     AAGCGGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCG                                                          <  SRR4302543.7250018/94‑1 (MQ=60)
                                     AAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCG                                                          >  SRR4302543.5039736/1‑94 (MQ=60)
                                     AAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCG                                                          <  SRR4302543.3810364/94‑1 (MQ=60)
                                     AAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCG                                                          >  SRR4302543.7841472/1‑94 (MQ=60)
                                     AAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCG                                                          <  SRR4302543.6468197/94‑1 (MQ=60)
                                     AAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCC                                                          >  SRR4302543.3949613/1‑94 (MQ=60)
                                      AGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGC                                                         >  SRR4302543.3631782/1‑94 (MQ=60)
                                      AGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGC                                                         >  SRR4302543.3417925/1‑94 (MQ=60)
                                        CAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGgcc                                                       >  SRR4302543.1445934/1‑91 (MQ=60)
                                        CAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCA                                                       >  SRR4302543.7905710/1‑94 (MQ=60)
                                        CAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCA                                                       >  SRR4302543.7653619/1‑94 (MQ=60)
                                        CAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCA                                                       <  SRR4302543.6650383/94‑1 (MQ=60)
                                        CAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCA                                                       >  SRR4302543.3826178/1‑94 (MQ=60)
                                         AGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCAC                                                      <  SRR4302543.4952899/94‑1 (MQ=60)
                                         AGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCAC                                                      >  SRR4302543.7760108/1‑94 (MQ=60)
                                            AGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCT                                                   <  SRR4302543.4944957/94‑1 (MQ=60)
                                            AGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCT                                                   >  SRR4302543.626218/1‑94 (MQ=60)
                                             GTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCccactt                                                  >  SRR4302543.4373457/1‑88 (MQ=60)
                                              TTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAA                                                 <  SRR4302543.5094656/94‑1 (MQ=60)
                                              TTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAA                                                 <  SRR4302543.5094657/94‑1 (MQ=60)
                                               TTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAATGAAAAGCAGGGCACGCGCCACCATAAC                                                <  SRR4302543.351479/94‑1 (MQ=60)
                                               TTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAAC                                                <  SRR4302543.7224031/94‑1 (MQ=60)
                                                TTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACA                                               <  SRR4302543.1319157/94‑1 (MQ=60)
                                                  AATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACcccgcccccccacaac                                             >  SRR4302543.7019211/1‑78 (MQ=60)
                                                  AATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGgccccgccccaacca                                             >  SRR4302543.7019212/1‑79 (MQ=60)
                                                  AATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACG                                             >  SRR4302543.7684509/1‑94 (MQ=60)
                                                   ATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGG                                            >  SRR4302543.933195/1‑94 (MQ=60)
                                                    TCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGT                                           <  SRR4302543.4518414/94‑1 (MQ=60)
                                                     CAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTG                                          >  SRR4302543.6294095/1‑94 (MQ=60)
                                                       GGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGACCGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGC                                        >  SRR4302543.5464134/1‑94 (MQ=60)
                                                       GGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGC                                        >  SRR4302543.5532376/1‑94 (MQ=60)
                                                       GGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGC                                        >  SRR4302543.402195/1‑94 (MQ=60)
                                                       GGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGC                                        >  SRR4302543.5445323/1‑94 (MQ=60)
                                                       GGTTGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGC                                        >  SRR4302543.5464133/1‑94 (MQ=60)
                                                          TGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCA                                     >  SRR4302543.5606856/1‑94 (MQ=60)
                                                          TGTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCA                                     <  SRR4302543.5075024/94‑1 (MQ=60)
                                                           GTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCCT                                    >  SRR4302543.7396142/1‑94 (MQ=60)
                                                           GTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCAT                                    <  SRR4302543.7559402/94‑1 (MQ=60)
                                                           GTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCAT                                    >  SRR4302543.764895/1‑94 (MQ=60)
                                                           GTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCAT                                    >  SRR4302543.5101337/1‑94 (MQ=60)
                                                           GTATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGGGGCGCAT                                    >  SRR4302543.7354140/1‑94 (MQ=60)
                                                             ATGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTT                                  <  SRR4302543.6247019/94‑1 (MQ=60)
                                                              TGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTT                                 >  SRR4302543.7484247/1‑94 (MQ=60)
                                                              TGACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTT                                 >  SRR4302543.6617270/1‑94 (MQ=60)
                                                               GACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGGCACCCTAACACGGTGGCGCTATTTA                                >  SRR4302543.6548182/1‑94 (MQ=60)
                                                               GACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTA                                <  SRR4302543.4121980/94‑1 (MQ=60)
                                                                GCCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTAT                               <  SRR4302543.2834168/94‑1 (MQ=60)
                                                                ACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTAT                               <  SRR4302543.2184567/94‑1 (MQ=60)
                                                                ACCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTAT                               <  SRR4302543.1103202/94‑1 (MQ=60)
                                                                 CCTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATG                              <  SRR4302543.2353142/94‑1 (MQ=60)
                                                                  CTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGGCACCCTAACACGGggggggcttttttgg                             >  SRR4302543.1974084/1‑79 (MQ=60)
                                                                  CTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGG                             >  SRR4302543.6006803/1‑94 (MQ=60)
                                                                  CTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGG                             >  SRR4302543.2383160/1‑94 (MQ=60)
                                                                  CTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGG                             >  SRR4302543.4238729/1‑94 (MQ=60)
                                                                  CTGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGACACCCTcaccaggtgggggatttttttg                             >  SRR4302543.1974085/1‑72 (MQ=60)
                                                                   TGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGA                            <  SRR4302543.942936/94‑1 (MQ=60)
                                                                   TGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGA                            <  SRR4302543.5685228/94‑1 (MQ=60)
                                                                   TGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGA                            >  SRR4302543.3450399/1‑94 (MQ=60)
                                                                   TGATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCCCCACCCCAACACGGGGGGGCATTTTTTGGA                            >  SRR4302543.1872856/1‑94 (MQ=60)
                                                                    GATGGTGACATAAATACGTCATCGATAGATGGACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGAC                           <  SRR4302543.731727/94‑1 (MQ=60)
                                                                    GATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGAC                           >  SRR4302543.1956094/1‑94 (MQ=60)
                                                                    GATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGAC                           <  SRR4302543.7283193/94‑1 (MQ=60)
                                                                    GATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGAC                           <  SRR4302543.4333934/94‑1 (MQ=60)
                                                                     ATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGGCACCCTCACACGGTGGCGCATTTTTTTGACA                          >  SRR4302543.356902/1‑94 (MQ=60)
                                                                     ATGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACA                          <  SRR4302543.3601105/94‑1 (MQ=60)
                                                                      TGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACAT                         <  SRR4302543.1257632/94‑1 (MQ=60)
                                                                      TGGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACAT                         <  SRR4302543.3256439/94‑1 (MQ=60)
                                                                      TGATGACATAAATACGTAATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACAT                         <  SRR4302543.6659751/94‑1 (MQ=60)
                                                                       GGTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATC                        >  SRR4302543.7327774/1‑94 (MQ=60)
                                                                        GTGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCC                       <  SRR4302543.213549/94‑1 (MQ=60)
                                                                         TGACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCC                      <  SRR4302543.2533081/94‑1 (MQ=60)
                                                                          GACATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGAGGCACCCTAACACGGgggcggcttttatgggtataccg                     >  SRR4302543.1676159/1‑71 (MQ=60)
                                                                             ATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAAT                  >  SRR4302543.2441864/1‑94 (MQ=60)
                                                                             ATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAAT                  >  SRR4302543.7506671/1‑94 (MQ=60)
                                                                             ATAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAAT                  >  SRR4302543.3543623/1‑94 (MQ=60)
                                                                             ATAAATACGTCATCCGTAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAAT                  <  SRR4302543.360542/94‑1 (MQ=60)
                                                                              TAAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATA                 <  SRR4302543.740532/94‑1 (MQ=60)
                                                                               AAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATAT                >  SRR4302543.1050469/1‑94 (MQ=60)
                                                                               AAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATAT                <  SRR4302543.5882984/94‑1 (MQ=60)
                                                                               AAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATAT                >  SRR4302543.6944495/1‑94 (MQ=60)
                                                                               AAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATAT                <  SRR4302543.5557336/94‑1 (MQ=60)
                                                                               AAATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATAT                <  SRR4302543.507679/94‑1 (MQ=60)
                                                                                aatgaGTCATCGATAGATGAGCGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTACCGCGTTGCCGCATTTTATGGACATCCCGAATATG               <  SRR4302543.6554970/89‑1 (MQ=60)
                                                                                AATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATG               <  SRR4302543.3677160/94‑1 (MQ=60)
                                                                                 ATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGgcccccccaaaccgggggggacttttttgacaacccccatatgc              >  SRR4302543.2969605/1‑50 (MQ=60)
                                                                                 ATACGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGC              >  SRR4302543.4092162/1‑94 (MQ=60)
                                                                                 ATACGTCATCGATAGATGAACGTGTAATATAAAAAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGC              <  SRR4302543.3297878/94‑1 (MQ=60)
                                                                                    CGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACGCGGTGGCGCATTTTATGGACATCCCGAATATGCAAA           <  SRR4302543.2046878/94‑1 (MQ=60)
                                                                                    CGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAA           <  SRR4302543.2046876/94‑1 (MQ=60)
                                                                                    CGTCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAA           >  SRR4302543.2813930/1‑94 (MQ=60)
                                                                                      TCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAAC         <  SRR4302543.6109144/94‑1 (MQ=60)
                                                                                      TCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAAC         <  SRR4302543.1990325/94‑1 (MQ=60)
                                                                                      TCATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAAC         <  SRR4302543.352545/94‑1 (MQ=60)
                                                                                       CATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGgcgcccccccacacacagggggcgttttttttgaacccccccaaataaaaaa        >  SRR4302543.1458627/1‑42 (MQ=60)
                                                                                        ATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGgcaacccaacaccgaggggcgcgtttttgaggcgcccgcaactaacaaaaa       >  SRR4302543.1433349/1‑43 (MQ=60)
                                                                                        ATCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCAGAATATGCAAAACGC       >  SRR4302543.3580475/1‑94 (MQ=60)
                                                                                         TCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCA      <  SRR4302543.6996803/94‑1 (MQ=60)
                                                                                         TCGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCA      <  SRR4302543.1899696/94‑1 (MQ=60)
                                                                                          CGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAG     >  SRR4302543.3616388/1‑94 (MQ=60)
                                                                                          CGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAG     <  SRR4302543.6096718/94‑1 (MQ=60)
                                                                                          CGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAG     <  SRR4302543.1369154/94‑1 (MQ=60)
                                                                                          CGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAG     >  SRR4302543.5998854/1‑94 (MQ=60)
                                                                                          CGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAG     <  SRR4302543.4649939/94‑1 (MQ=60)
                                                                                          CGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAG     <  SRR4302543.690905/94‑1 (MQ=60)
                                                                                          CGATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAG     <  SRR4302543.4816301/94‑1 (MQ=60)
                                                                                           GATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAGG    <  SRR4302543.5634986/94‑1 (MQ=60)
                                                                                           GATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAGG    <  SRR4302543.2229234/94‑1 (MQ=60)
                                                                                            ATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAGGC   >  SRR4302543.5363600/1‑94 (MQ=60)
                                                                                            ATAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCCAACACGGggggggatttttttggcattccgaatatgccaaaacgcggg   >  SRR4302543.1763351/1‑53 (MQ=60)
                                                                                             TAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAGGCA  <  SRR4302543.1171878/94‑1 (MQ=60)
                                                                                             |                                                                                             
TCAGGCTAAGTATCCGGTTGATCTGAAACTGGTTGTTAAGCAGTAGTTTTAATCAGGTTGTATGACCTGATGGTGACATAAATACGTCATCGACAGATGAACGTGTAATATAAAGAAAAGCAGGGCACGCGCCACCCTAACACGGTGGCGCATTTTATGGACATCCCGAATATGCAAAACGCAGGCA  >  NC_000913/3934749‑3934935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: