Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,937,523 A→G L239P (CTG→CCG)  yieO ← putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,937,5230AG99.5% 1190.1 / ‑3.8 378L239P (CTG→CCG) yieOputative transport protein
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (194/180);  total (195/183)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01

Only 100 of 383 total aligned reads displayed.

ACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGA  >  NC_000913/3937433‑3937612
                                                                                          |                                                                                         
 cGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTa                                                                                        <  2:5453526/93‑1 (MQ=255)
 cGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTa                                                                                        >  1:1805312/1‑93 (MQ=255)
  gATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTaa                                                                                       >  1:1029158/1‑93 (MQ=255)
  gATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTaa                                                                                       <  2:6635175/93‑1 (MQ=255)
  gATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTaa                                                                                       >  2:744680/1‑93 (MQ=255)
  gATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTaa                                                                                       <  1:5966226/93‑1 (MQ=255)
   aTACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAAc                                                                                      <  2:1220669/93‑1 (MQ=255)
    tACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAAcc                                                                                     >  2:3026044/1‑93 (MQ=255)
     aCCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATTGGTTTGGCGTGCGTCGTGCATGCAGAATATAGAGAAGCGGTAAccc                                                                                    >  2:4080618/1‑93 (MQ=255)
      ccGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCg                                                                                   >  1:1706836/1‑93 (MQ=255)
       cGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGa                                                                                  >  1:3965051/1‑93 (MQ=255)
         aTCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATg                                                                                >  1:223059/1‑93 (MQ=255)
         aTCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATg                                                                                >  2:1687394/1‑93 (MQ=255)
         aTCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATg                                                                                >  1:535391/1‑93 (MQ=255)
           cGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCt                                                                              <  1:1413086/93‑1 (MQ=255)
            gagaAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCtt                                                                             <  2:5135616/93‑2 (MQ=255)
            gagaAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTg                                                                             <  2:2480136/93‑1 (MQ=255)
             agaAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTgg                                                                            <  1:6893632/93‑1 (MQ=255)
             agaAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTgg                                                                            >  1:7795279/1‑93 (MQ=255)
             agaAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTgg                                                                            <  1:606339/93‑1 (MQ=255)
              gaAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGt                                                                           >  2:495009/1‑93 (MQ=255)
              gaAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGt                                                                           >  2:7011699/1‑93 (MQ=255)
                aaGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGa                                                                         >  1:3111159/1‑93 (MQ=255)
                 aGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGAc                                                                        <  1:1355020/93‑1 (MQ=255)
                 aGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGAc                                                                        >  2:4170203/1‑93 (MQ=255)
                 aGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGAc                                                                        <  2:3353395/93‑1 (MQ=255)
                   tGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACaa                                                                      >  1:1910584/1‑93 (MQ=255)
                   tGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACaa                                                                      >  1:4960736/1‑93 (MQ=255)
                    gCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAAt                                                                     <  2:5615496/93‑1 (MQ=255)
                     cGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAAtt                                                                    <  2:4320604/93‑1 (MQ=255)
                      gggTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTa                                                                   >  2:4642009/1‑93 (MQ=255)
                       ggTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTAc                                                                  <  1:5798551/93‑1 (MQ=255)
                         ttttAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCg                                                                >  1:157947/1‑93 (MQ=255)
                          tttAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGt                                                               <  1:6192852/93‑1 (MQ=255)
                            taaataaaTCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCa                                                             <  1:4577064/93‑1 (MQ=255)
                             taataaatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCaa                                                            <  1:5023546/92‑1 (MQ=255)
                             aaataaatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCTGATGCTGGTGACAATTACCGTCaa                                                            <  2:2102554/93‑1 (MQ=255)
                             aaataaatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCaa                                                            <  2:2001739/93‑1 (MQ=255)
                             aaataaatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCaa                                                            <  2:5321706/93‑1 (MQ=255)
                              aataaatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAg                                                           >  1:364294/1‑93 (MQ=255)
                                taaatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGc                                                         >  1:6781130/1‑93 (MQ=255)
                                taaatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGc                                                         <  2:1748449/93‑1 (MQ=255)
                                  aatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCaa                                                       <  1:7088251/93‑1 (MQ=255)
                                  aatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCaa                                                       >  2:1870607/1‑93 (MQ=255)
                                  aatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCaa                                                       >  1:5436846/1‑93 (MQ=255)
                                       aaTGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAg                                                  >  2:2187800/1‑93 (MQ=255)
                                        aTGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGc                                                 <  2:6549112/93‑1 (MQ=255)
                                        aTGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGc                                                 <  2:5886857/93‑1 (MQ=255)
                                        aTGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGc                                                 <  1:7319058/93‑1 (MQ=255)
                                         ataaaTTAATGGTTTTGGCGGGCGTCGTGCATGGATAATATAGAGAAGCTGTAACCCGATGCTGTTGACAATTACCGTCAAGGCAATCCAGCt                                                <  1:1259840/91‑1 (MQ=255)
                                          gAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTg                                               >  2:6289391/1‑93 (MQ=255)
                                           aaaTTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTgg                                              <  2:3166135/93‑1 (MQ=255)
                                            aaTTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGc                                             >  2:5688400/1‑93 (MQ=255)
                                             aTTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCg                                            >  1:513063/1‑93 (MQ=255)
                                              ttAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCTAGCAGGCGa                                           >  2:1436712/1‑93 (MQ=255)
                                              ttAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGa                                           >  1:4441402/1‑93 (MQ=255)
                                              ttAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGa                                           <  1:3306849/93‑1 (MQ=255)
                                               tAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGAc                                          >  2:6168276/1‑93 (MQ=255)
                                                 aTGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACaa                                        <  2:4536680/93‑1 (MQ=255)
                                                 aTGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACaa                                        >  2:3621340/1‑93 (MQ=255)
                                                 aTGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACaa                                        >  1:5567321/1‑93 (MQ=255)
                                                   gggTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATc                                      <  2:2283807/93‑1 (MQ=255)
                                                    ggTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCt                                     >  1:4845388/1‑93 (MQ=255)
                                                    ggTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCt                                     >  2:7059724/1‑93 (MQ=255)
                                                     gTTTGTCGTGCGTCGTGCAAGGGGAATATATAGAAGCTGTAACCCGATGCTGTTGACAATTACCTTCAAGGCAATCCAGCTGGCGACAATCtt                                    <  1:2689562/93‑1 (MQ=255)
                                                     gTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCtt                                    <  2:6390702/93‑1 (MQ=255)
                                                      tttGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCttt                                   >  1:1450631/1‑93 (MQ=255)
                                                        tGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTc                                 >  2:4431028/1‑93 (MQ=255)
                                                        tGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTc                                 >  2:7194618/1‑93 (MQ=255)
                                                         ggCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTcc                                <  2:1529216/93‑1 (MQ=255)
                                                           cgtgcgtCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTcccc                              <  1:788609/93‑1 (MQ=255)
                                                            gtgcgtCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCg                             <  1:3388038/93‑1 (MQ=255)
                                                            gtgcgtCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCg                             <  1:7225227/93‑1 (MQ=255)
                                                             tgcgtCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGa                            >  1:2382199/1‑93 (MQ=255)
                                                             tgcgtCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGa                            >  1:3738536/1‑93 (MQ=255)
                                                              gcgtCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGaa                           <  1:3052204/93‑1 (MQ=255)
                                                                 tcgtGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAg                        >  1:2097231/1‑93 (MQ=255)
                                                                 tcgtGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAg                        >  1:5176658/1‑93 (MQ=255)
                                                                 tcgtGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAg                        >  1:3869269/1‑93 (MQ=255)
                                                                 gcgtGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAg                        <  2:2642177/92‑1 (MQ=255)
                                                                   gtGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGct                      >  1:6376120/1‑93 (MQ=255)
                                                                    tGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGctc                     >  2:324388/1‑93 (MQ=255)
                                                                    tGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGctc                     <  1:260643/93‑1 (MQ=255)
                                                                      cATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTa                   <  1:7526611/93‑1 (MQ=255)
                                                                      cATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTa                   <  2:7544283/93‑1 (MQ=255)
                                                                       aTGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTAt                  >  2:6751492/1‑93 (MQ=255)
                                                                       aTGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTAt                  <  1:2857278/93‑1 (MQ=255)
                                                                        tGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTAtt                 >  2:2764495/1‑93 (MQ=255)
                                                                        tGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTAtt                 >  1:1746307/1‑93 (MQ=255)
                                                                         ggAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTc                <  2:4270061/93‑1 (MQ=255)
                                                                          gagaATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTcc               >  2:3446/1‑93 (MQ=255)
                                                                          gagaATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTcc               <  1:4093888/93‑1 (MQ=255)
                                                                              atatAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCtt           <  2:7738645/93‑1 (MQ=255)
                                                                              atatAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCtt           >  1:6562098/1‑93 (MQ=255)
                                                                               tataGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTg          >  2:3818250/1‑93 (MQ=255)
                                                                               tataGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTg          >  2:1046875/1‑93 (MQ=255)
                                                                                ataGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTga         >  2:1800137/1‑93 (MQ=255)
                                                                                 taGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTgag        <  1:6687846/93‑1 (MQ=255)
                                                                                  agagAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTgaga       <  1:4302575/93‑1 (MQ=255)
                                                                                     gaAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTgagaaga    >  1:1147912/1‑93 (MQ=255)
                                                                                          |                                                                                         
ACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGA  >  NC_000913/3937433‑3937612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 220 total aligned reads displayed.
CCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAACAA  >  NC_000913/3937430‑3937616
                                                                                             |                                                                                             
GCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCG                                                                                               <  SRR4302543.6600654/94‑1 (MQ=60)
CCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCG                                                                                               <  SRR4302543.2415580/94‑1 (MQ=60)
CCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCG                                                                                               >  SRR4302543.7313473/1‑94 (MQ=60)
CCTACGATACCGATCGAGAAAGCGCGGGGTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCG                                                                                               >  SRR4302543.6312642/1‑94 (MQ=60)
 CTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGG                                                                                              >  SRR4302543.5765484/1‑94 (MQ=60)
 CTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGG                                                                                              >  SRR4302543.3663137/1‑94 (MQ=60)
 CTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGG                                                                                              <  SRR4302543.4909035/94‑1 (MQ=60)
 CTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGG                                                                                              >  SRR4302543.4196229/1‑94 (MQ=60)
  TACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGT                                                                                             <  SRR4302543.4302/94‑1 (MQ=60)
   ACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTA                                                                                            >  SRR4302543.1821469/1‑94 (MQ=60)
    CGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAA                                                                                           >  SRR4302543.1982649/1‑94 (MQ=60)
    CGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAA                                                                                           >  SRR4302543.2777987/1‑94 (MQ=60)
    CGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAA                                                                                           >  SRR4302543.1038280/1‑94 (MQ=60)
     GATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAAC                                                                                          >  SRR4302543.7816540/1‑94 (MQ=60)
     GATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAAC                                                                                          <  SRR4302543.6020851/94‑1 (MQ=60)
     GATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAAC                                                                                          <  SRR4302543.6020852/94‑1 (MQ=60)
      ATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACC                                                                                         >  SRR4302543.3081394/1‑94 (MQ=60)
      ATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACC                                                                                         >  SRR4302543.3097252/1‑94 (MQ=60)
      ATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGATTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACC                                                                                         >  SRR4302543.4042953/1‑94 (MQ=60)
        ACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCG                                                                                       <  SRR4302543.904646/94‑1 (MQ=60)
        ACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCG                                                                                       >  SRR4302543.1411650/1‑94 (MQ=60)
        ACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCG                                                                                       >  SRR4302543.1722114/1‑94 (MQ=60)
        ACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCG                                                                                       >  SRR4302543.1722113/1‑94 (MQ=60)
        ACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCG                                                                                       <  SRR4302543.3874332/94‑1 (MQ=60)
          CGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGAT                                                                                     <  SRR4302543.1611159/94‑1 (MQ=60)
          CGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGAT                                                                                     <  SRR4302543.7311393/94‑1 (MQ=60)
          CGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGAT                                                                                     >  SRR4302543.7135036/1‑94 (MQ=60)
          CGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGAT                                                                                     <  SRR4302543.1361109/94‑1 (MQ=60)
           GATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATG                                                                                    >  SRR4302543.224986/1‑94 (MQ=60)
           GATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATG                                                                                    >  SRR4302543.540350/1‑94 (MQ=60)
           GATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATG                                                                                    >  SRR4302543.224985/1‑94 (MQ=60)
           GATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATG                                                                                    <  SRR4302543.4555352/94‑1 (MQ=60)
           GATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATG                                                                                    <  SRR4302543.4864451/94‑1 (MQ=60)
            ATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGC                                                                                   >  SRR4302543.4163730/1‑94 (MQ=60)
             TCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCT                                                                                  <  SRR4302543.4536058/94‑1 (MQ=60)
              CGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTG                                                                                 >  SRR4302543.1621571/1‑94 (MQ=60)
              CGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTG                                                                                 <  SRR4302543.1425865/94‑1 (MQ=60)
               GAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTATTGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGG                                                                                >  SRR4302543.3690377/1‑94 (MQ=60)
               GAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGG                                                                                <  SRR4302543.5509987/94‑1 (MQ=60)
               GAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGG                                                                                >  SRR4302543.7868735/1‑94 (MQ=60)
                AGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGT                                                                               >  SRR4302543.4978557/1‑94 (MQ=60)
                AGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGT                                                                               >  SRR4302543.3375963/1‑94 (MQ=60)
                AGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGT                                                                               <  SRR4302543.611879/94‑1 (MQ=60)
                AGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGT                                                                               <  SRR4302543.6958434/94‑1 (MQ=60)
                AGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGG                                                                               >  SRR4302543.3375962/1‑94 (MQ=60)
                 GAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTG                                                                              <  SRR4302543.826056/94‑1 (MQ=60)
                  AAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGA                                                                             >  SRR4302543.3139146/1‑94 (MQ=60)
                  AAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGA                                                                             <  SRR4302543.7163860/94‑1 (MQ=60)
                  AAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGA                                                                             >  SRR4302543.2816051/1‑94 (MQ=60)
                   AAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGAC                                                                            <  SRR4302543.7002276/94‑1 (MQ=60)
                    AGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACA                                                                           <  SRR4302543.6918080/94‑1 (MQ=60)
                    AGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACA                                                                           >  SRR4302543.4230936/1‑94 (MQ=60)
                    AGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACA                                                                           <  SRR4302543.1367141/94‑1 (MQ=60)
                    AGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACA                                                                           <  SRR4302543.606567/94‑1 (MQ=60)
                     GTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAA                                                                          >  SRR4302543.1927803/1‑94 (MQ=60)
                     GTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAA                                                                          <  SRR4302543.315697/94‑1 (MQ=60)
                     GTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAA                                                                          >  SRR4302543.5005892/1‑94 (MQ=60)
                       GCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATT                                                                        <  SRR4302543.3783960/94‑1 (MQ=60)
                       GCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATT                                                                        <  SRR4302543.6735045/94‑1 (MQ=60)
                        CGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTA                                                                       <  SRR4302543.782951/94‑1 (MQ=60)
                        CGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTA                                                                       >  SRR4302543.1058302/1‑94 (MQ=60)
                         GGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTAC                                                                      >  SRR4302543.6234269/1‑94 (MQ=60)
                         GGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTAC                                                                      <  SRR4302543.1224781/94‑1 (MQ=60)
                          GGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACC                                                                     <  SRR4302543.6640228/94‑1 (MQ=60)
                          GGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACC                                                                     <  SRR4302543.5666444/94‑1 (MQ=60)
                          GGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACC                                                                     <  SRR4302543.3225234/94‑1 (MQ=60)
                           GTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCG                                                                    <  SRR4302543.301253/94‑1 (MQ=60)
                           GTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCG                                                                    >  SRR4302543.3848380/1‑94 (MQ=60)
                           GTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCG                                                                    >  SRR4302543.159301/1‑94 (MQ=60)
                             TTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTC                                                                  <  SRR4302543.6251361/94‑1 (MQ=60)
                              TTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCA                                                                 >  SRR4302543.1236440/1‑94 (MQ=60)
                              TTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCA                                                                 <  SRR4302543.1703765/94‑1 (MQ=60)
                              TTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCA                                                                 >  SRR4302543.1428504/1‑94 (MQ=60)
                               TAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAA                                                                <  SRR4302543.4618672/94‑1 (MQ=60)
                                TAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAG                                                               <  SRR4302543.5069261/94‑1 (MQ=60)
                                AAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAG                                                               <  SRR4302543.1727508/94‑1 (MQ=60)
                                AAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAG                                                               <  SRR4302543.6005679/94‑1 (MQ=60)
                                AAATAAATCTAATGAAATTAATGGGTTTGCCGTGCGGCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAG                                                               <  SRR4302543.515972/94‑1 (MQ=60)
                                  ATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGC                                                             >  SRR4302543.6845167/1‑94 (MQ=60)
                                   TAAATCTAATGAACTTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCA                                                            <  SRR4302543.7097402/94‑1 (MQ=60)
                                   TAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCA                                                            <  SRR4302543.177863/94‑1 (MQ=60)
                                   TAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCA                                                            >  SRR4302543.5269446/1‑94 (MQ=60)
                                    AAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTTCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAA                                                           >  SRR4302543.1390746/1‑94 (MQ=60)
                                    AAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAA                                                           >  SRR4302543.5486223/1‑94 (MQ=60)
                                     AATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAAT                                                          <  SRR4302543.7157085/94‑1 (MQ=60)
                                       ACTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCC                                                        <  SRR4302543.1754615/94‑1 (MQ=60)
                                        CTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCA                                                       >  SRR4302543.1456407/1‑94 (MQ=60)
                                        CTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCA                                                       >  SRR4302543.1827288/1‑94 (MQ=60)
                                         TAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAG                                                      <  SRR4302543.7922834/94‑1 (MQ=60)
                                         TAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAG                                                      >  SRR4302543.7371481/1‑94 (MQ=60)
                                          AATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGC                                                     <  SRR4302543.6033072/94‑1 (MQ=60)
                                          AATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATAAAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGC                                                     >  SRR4302543.6770149/1‑94 (MQ=60)
                                           ATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCT                                                    <  SRR4302543.1790237/94‑1 (MQ=60)
                                           ATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCT                                                    <  SRR4302543.7389562/94‑1 (MQ=60)
                                            atAAATTAATGGTTTTGGCGGGCGTCGTGCATGGATAATATAGAGAAGCTGTAACCCGATGCTGTTGACAATTACCGTCAAGGCAATCCAGCTG                                                   <  SRR4302543.1271112/92‑1 (MQ=60)
                                            TGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTG                                                   <  SRR4302543.6773129/94‑1 (MQ=60)
                                            TGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTG                                                   >  SRR4302543.7498248/1‑94 (MQ=60)
                                            TGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTG                                                   <  SRR4302543.5416682/94‑1 (MQ=60)
                                            TGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACACGATGCTGGTGACAATTCCCGTCAAGGCGATCCAGCAG                                                   >  SRR4302543.7899754/1‑94 (MQ=60)
                                             GAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGG                                                  <  SRR4302543.1857488/94‑1 (MQ=60)
                                              AAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGC                                                 <  SRR4302543.3756696/94‑1 (MQ=60)
                                               AATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCG                                                >  SRR4302543.5935877/1‑94 (MQ=60)
                                               AATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCG                                                >  SRR4302543.517835/1‑94 (MQ=60)
                                                ATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGA                                               >  SRR4302543.4481619/1‑94 (MQ=60)
                                                ATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGA                                               >  SRR4302543.3526344/1‑94 (MQ=60)
                                                ATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGA                                               >  SRR4302543.227734/1‑94 (MQ=60)
                                                 TTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGAC                                              <  SRR4302543.1103948/94‑1 (MQ=60)
                                                 TTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGAC                                              <  SRR4302543.3336690/94‑1 (MQ=60)
                                                  TAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACA                                             >  SRR4302543.4115301/1‑94 (MQ=60)
                                                   AATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAA                                            >  SRR4302543.1185562/1‑94 (MQ=60)
                                                   AATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAA                                            >  SRR4302543.189747/1‑94 (MQ=60)
                                                   AATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAA                                            >  SRR4302543.5617973/1‑94 (MQ=60)
                                                   AATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAA                                            <  SRR4302543.5053412/94‑1 (MQ=60)
                                                   AATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAA                                            <  SRR4302543.5053413/94‑1 (MQ=60)
                                                    ATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAAT                                           >  SRR4302543.5205040/1‑94 (MQ=60)
                                                     TGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATC                                          <  SRR4302543.5834518/94‑1 (MQ=60)
                                                       GGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTCGCCCGATGCTGGTGACAATTACCGTCACGGCAATCCAGCTGGCGACAATCTT                                        >  SRR4302543.5554111/1‑94 (MQ=60)
                                                       GGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTT                                        >  SRR4302543.1327727/1‑94 (MQ=60)
                                                       GGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTT                                        >  SRR4302543.2244198/1‑94 (MQ=60)
                                                       GGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTT                                        <  SRR4302543.3371173/94‑1 (MQ=60)
                                                       GGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTT                                        <  SRR4302543.3668046/94‑1 (MQ=60)
                                                        GTTTGTCGTGCGTCGTGCAAGGGGAATATATAGAAGCTGTAACCCGATGCTGTTGACAATTACCTTCAAGGCAATCCAGCTGGCGACAATCTTT                                       <  SRR4302543.2713949/94‑1 (MQ=60)
                                                        GTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTT                                       >  SRR4302543.1463731/1‑94 (MQ=60)
                                                        GTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTT                                       <  SRR4302543.5195882/94‑1 (MQ=60)
                                                          TTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTC                                     <  SRR4302543.5409652/94‑1 (MQ=60)
                                                          TTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTC                                     <  SRR4302543.1945090/94‑1 (MQ=60)
                                                            GGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCC                                   <  SRR4302543.1592175/94‑1 (MQ=60)
                                                              CGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCG                                 >  SRR4302543.6831785/1‑94 (MQ=60)
                                                              CGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCG                                 <  SRR4302543.795547/94‑1 (MQ=60)
                                                              CGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCC                                 >  SRR4302543.5230204/1‑94 (MQ=60)
                                                               GTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGA                                >  SRR4302543.2403768/1‑94 (MQ=60)
                                                               GTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGA                                <  SRR4302543.3418413/94‑1 (MQ=60)
                                                               GTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGA                                <  SRR4302543.7295237/94‑1 (MQ=60)
                                                               GTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGA                                >  SRR4302543.3771423/1‑94 (MQ=60)
                                                                TGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAA                               >  SRR4302543.4450699/1‑94 (MQ=60)
                                                                 GCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAAT                              >  SRR4302543.1450772/1‑94 (MQ=60)
                                                                 GCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAAT                              <  SRR4302543.6324659/94‑1 (MQ=60)
                                                                 GCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAAT                              <  SRR4302543.7474704/94‑1 (MQ=60)
                                                                 GCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAAT                              <  SRR4302543.2552238/94‑1 (MQ=60)
                                                                 GCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAAT                              <  SRR4302543.2344921/94‑1 (MQ=60)
                                                                 GCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAAT                              >  SRR4302543.263090/1‑94 (MQ=60)
                                                                 GCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAAT                              <  SRR4302543.3079697/94‑1 (MQ=60)
                                                                   GTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAG                            >  SRR4302543.2427729/1‑94 (MQ=60)
                                                                   GTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAG                            >  SRR4302543.3903437/1‑94 (MQ=60)
                                                                   GTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAG                            >  SRR4302543.5223393/1‑94 (MQ=60)
                                                                   GTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCAAGCTGGCGACAATCTTTTCCCCGAATAG                            >  SRR4302543.4753705/1‑94 (MQ=60)
                                                                     CGTGCATGTAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCT                          <  SRR4302543.6695807/94‑1 (MQ=60)
                                                                     CGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCT                          >  SRR4302543.518577/1‑94 (MQ=60)
                                                                     CGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCT                          >  SRR4302543.6436110/1‑94 (MQ=60)
                                                                      GTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTC                         >  SRR4302543.3976008/1‑94 (MQ=60)
                                                                      GTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTC                         >  SRR4302543.3932959/1‑94 (MQ=60)
                                                                       TGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCT                        <  SRR4302543.262923/94‑1 (MQ=60)
                                                                        GCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTA                       >  SRR4302543.4582495/1‑94 (MQ=60)
                                                                        GCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTA                       >  SRR4302543.7166506/1‑94 (MQ=60)
                                                                        GCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTA                       <  SRR4302543.1371136/94‑1 (MQ=60)
                                                                         CATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTAT                      <  SRR4302543.4069191/94‑1 (MQ=60)
                                                                         CATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTAT                      <  SRR4302543.7598417/94‑1 (MQ=60)
                                                                         CATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTAT                      >  SRR4302543.487646/1‑94 (MQ=60)
                                                                          ATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATT                     >  SRR4302543.4442986/1‑94 (MQ=60)
                                                                          ATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATT                     >  SRR4302543.527635/1‑94 (MQ=60)
                                                                          ATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATT                     <  SRR4302543.6354515/94‑1 (MQ=60)
                                                                          ATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATT                     <  SRR4302543.7429326/94‑1 (MQ=60)
                                                                          ATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATT                     >  SRR4302543.1761901/1‑94 (MQ=60)
                                                                          ATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATT                     <  SRR4302543.3752231/94‑1 (MQ=60)
                                                                           TGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTC                    >  SRR4302543.3038495/1‑94 (MQ=60)
                                                                             GAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCG                  <  SRR4302543.4130617/94‑1 (MQ=60)
                                                                              AGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGC                 >  SRR4302543.4338719/1‑94 (MQ=60)
                                                                               GAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCT                >  SRR4302543.6281633/1‑94 (MQ=60)
                                                                               GAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCT                <  SRR4302543.2262868/94‑1 (MQ=60)
                                                                               GAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCT                <  SRR4302543.5041741/94‑1 (MQ=60)
                                                                               GAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCT                <  SRR4302543.2047421/94‑1 (MQ=60)
                                                                               GAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCCTTTCCCCGAATAGCTCTATTCCGCT                <  SRR4302543.2899766/94‑1 (MQ=60)
                                                                                AATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTT               >  SRR4302543.6623843/1‑94 (MQ=60)
                                                                                 ATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTG              <  SRR4302543.7920298/94‑1 (MQ=60)
                                                                                  TATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGA             >  SRR4302543.2720861/1‑94 (MQ=60)
                                                                                  TATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGA             <  SRR4302543.5104761/94‑1 (MQ=60)
                                                                                   ATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAG            >  SRR4302543.6539054/1‑94 (MQ=60)
                                                                                   ATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAG            >  SRR4302543.6503166/1‑94 (MQ=60)
                                                                                   ATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAG            >  SRR4302543.2645545/1‑94 (MQ=60)
                                                                                    TAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGA           <  SRR4302543.6750974/94‑1 (MQ=60)
                                                                                     AGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAA          <  SRR4302543.4341665/94‑1 (MQ=60)
                                                                                     AGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAA          >  SRR4302543.5656911/1‑94 (MQ=60)
                                                                                     AGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAA          >  SRR4302543.6943647/1‑94 (MQ=60)
                                                                                       AGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGA        <  SRR4302543.605039/94‑1 (MQ=60)
                                                                                       AGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGA        <  SRR4302543.2691863/94‑1 (MQ=60)
                                                                                       AGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGA        >  SRR4302543.1158370/1‑94 (MQ=60)
                                                                                        GAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAG       <  SRR4302543.4983661/94‑1 (MQ=60)
                                                                                        GAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAG       >  SRR4302543.3583081/1‑94 (MQ=60)
                                                                                        GAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAG       <  SRR4302543.6192571/94‑1 (MQ=60)
                                                                                         AAGCGGTCACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGA      <  SRR4302543.2459472/94‑1 (MQ=60)
                                                                                          AGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAA     >  SRR4302543.7981041/1‑94 (MQ=60)
                                                                                           GCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAAC    <  SRR4302543.1083642/94‑1 (MQ=60)
                                                                                           GCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAAC    <  SRR4302543.6194237/94‑1 (MQ=60)
                                                                                           GCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAAC    <  SRR4302543.3199390/94‑1 (MQ=60)
                                                                                           GCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAAC    >  SRR4302543.3513158/1‑94 (MQ=60)
                                                                                           GCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAAC    <  SRR4302543.561013/94‑1 (MQ=60)
                                                                                            CGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAACA   <  SRR4302543.7475411/94‑1 (MQ=60)
                                                                                            CGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAACA   <  SRR4302543.2830059/94‑1 (MQ=60)
                                                                                            CGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAACA   <  SRR4302543.6811580/94‑1 (MQ=60)
                                                                                             GGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAACAA  <  SRR4302543.7215643/94‑1 (MQ=60)
                                                                                             |                                                                                             
CCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAACAA  >  NC_000913/3937430‑3937616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑