Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,949,187	A→G	Q336R (CAG→CGG)	ilvG →	acetolactate synthase II large subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,949,187	0	A	G	99.0%	1168.5 / ‑0.3	382	Q336R (CAG→CGG)	ilvG	acetolactate synthase II large subunit
Reads supporting (aligned to +/- strand): ref base A (3/1); new base G (201/176); total (205/177)
Fisher's exact test for biased strand distribution p-value = 6.27e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.72e-01

Only 100 of 407 total aligned reads displayed.

GGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAAC  >  NC_000913/3949097‑3949276

ggCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGc                                                                                         <  2:4571335/93‑1 (MQ=255)

ggCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGc                                                                                         <  1:646611/93‑1 (MQ=255)

ggCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGc                                                                                         <  1:5128697/93‑1 (MQ=255)

ggCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGc                                                                                         >  1:3838938/1‑93 (MQ=255)

ggCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGc                                                                                         <  2:7164633/93‑1 (MQ=255)

  cacaTGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTg                                                                                       <  2:756153/93‑1 (MQ=255)

   acaTTTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGc                                                                                      <  1:4718218/93‑1 (MQ=255)

   acaTGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCTCGCGGCTGc                                                                                      <  2:5240659/93‑1 (MQ=255)

   acaTGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGc                                                                                      <  2:6411585/93‑1 (MQ=255)

     aTGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGt                                                                                    <  1:2648100/93‑1 (MQ=255)

      tgtgGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGtg                                                                                   >  2:6185906/1‑93 (MQ=255)

      tgtgGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGtg                                                                                   >  2:5889463/1‑93 (MQ=255)

      tgtgGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGtg                                                                                   >  2:5674049/1‑93 (MQ=255)

       gtgGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGtga                                                                                  >  1:372531/1‑93 (MQ=255)

        tgGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGtgat                                                                                 >  1:1225560/1‑93 (MQ=255)

          gCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGtgatga                                                                               <  2:3461387/93‑1 (MQ=255)

          gCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGtgatga                                                                               <  1:3294222/93‑1 (MQ=255)

           cATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGaa                                                                              <  1:545140/93‑1 (MQ=255)

            aTTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGaaa                                                                             >  1:1160325/1‑92 (MQ=255)

             ttACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAAct                                                                            >  1:6901635/1‑92 (MQ=255)

             ttACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACa                                                                            >  2:38480/1‑93 (MQ=255)

             ttACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACa                                                                            <  2:1587786/93‑1 (MQ=255)

             ttACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACa                                                                            <  2:5501651/93‑1 (MQ=255)

              tACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACAt                                                                           <  1:5329011/93‑1 (MQ=255)

                 aaGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTcc                                                                        <  2:212157/93‑1 (MQ=255)

                 aaGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTcc                                                                        <  2:5967161/93‑1 (MQ=255)

                  aGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCt                                                                       >  2:7465575/1‑93 (MQ=255)

                  aGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCt                                                                       >  1:1463276/1‑93 (MQ=255)

                   ggTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTg                                                                      >  1:3024809/1‑93 (MQ=255)

                   ggTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTg                                                                      <  2:2808321/93‑1 (MQ=255)

                   ggTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTg                                                                      <  2:1518069/93‑1 (MQ=255)

                   ggTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTg                                                                      >  2:1047592/1‑93 (MQ=255)

                   ggTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTg                                                                      <  1:757001/93‑1 (MQ=255)

                    gTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTgg                                                                     <  2:7936237/93‑1 (MQ=255)

                     tGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGc                                                                    <  2:1202182/93‑1 (MQ=255)

                     tGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGc                                                                    <  2:2620246/93‑1 (MQ=255)

                     tGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGc                                                                    <  1:3946011/93‑1 (MQ=255)

                      gATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCg                                                                   >  1:6580570/1‑93 (MQ=255)

                       aTTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGt                                                                  >  2:3527744/1‑93 (MQ=255)

                        tttAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACAGTGCGCGCGGCTGCGTGATGAACATTCCTGGCGtt                                                                 >  1:4836070/1‑93 (MQ=255)

                        tttAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGtt                                                                 >  2:7332550/1‑93 (MQ=255)

                        ttaaaaTGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGtt                                                                 <  2:2226839/90‑1 (MQ=255)

                             aTGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGAc                                                            <  1:5009693/93‑1 (MQ=255)

                              tGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGatc                                                           >  1:7681155/1‑91 (MQ=255)

                              tGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGAcc                                                           <  1:5741871/93‑1 (MQ=255)

                               gCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCa                                                          >  2:1333972/1‑93 (MQ=255)

                                   tGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATccc                                                      <  1:7296637/93‑1 (MQ=255)

                                   tGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATccc                                                      >  2:4055789/1‑93 (MQ=255)

                                   tGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATccc                                                      >  1:7908827/1‑93 (MQ=255)

                                   tGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATccc                                                      >  1:1212721/1‑93 (MQ=255)

                                     ttACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCgg                                                    <  1:845403/93‑1 (MQ=255)

                                        ccAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGa                                                 <  1:1868436/93‑1 (MQ=255)

                                        ccAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGa                                                 <  1:1324735/93‑1 (MQ=255)

                                        caaGCATTACAGGAGCTATTAAATCAATGTCAGGAAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGATCATCCCGGTGa                                                 <  2:3044547/91‑1 (MQ=255)

                                         cAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGAc                                                >  2:3226406/1‑93 (MQ=255)

                                         cAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGAc                                                <  2:693138/93‑1 (MQ=255)

                                          aGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACg                                               <  2:4322251/93‑1 (MQ=255)

                                             aTTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGATCATCCCGGTGACGCTa                                            <  2:6670426/93‑1 (MQ=255)

                                              ttACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTAt                                           >  2:4151510/1‑93 (MQ=255)

                                                  agcagcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAc                                       >  1:4221121/1‑93 (MQ=255)

                                                   gcagcCGTTAAATCAATGACTGGCAGCCACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcg                                      >  2:3764461/1‑93 (MQ=255)

                                                   gcagcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcg                                      >  1:7311519/1‑93 (MQ=255)

                                                    cagcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcgc                                     <  2:6989236/93‑1 (MQ=255)

                                                     agcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcgcg                                    >  2:3951464/1‑93 (MQ=255)

                                                      gcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGATCATCCCGGTGACGCTATCTACgcgc                                   <  1:1555830/93‑1 (MQ=255)

                                                      gcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACgcgc                                   >  2:4227286/1‑93 (MQ=255)

                                                      gcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACgcgc                                   >  2:2352099/1‑93 (MQ=255)

                                                         gTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCTTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgt                                >  2:1267394/1‑93 (MQ=255)

                                                         gTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgt                                >  2:2937740/1‑93 (MQ=255)

                                                         gTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgt                                >  1:603962/1‑93 (MQ=255)

                                                         gTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgt                                >  1:2797013/1‑93 (MQ=255)

                                                          ttAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGATCATCCCGGTGACGCTATCTACGCGCCgtt                               >  1:4374138/1‑93 (MQ=255)

                                                            aaaTCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgt                             >  1:2142226/1‑93 (MQ=255)

                                                             aaTCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGTCGCTATCTACGCGCCgttgtt                            >  1:4910259/1‑93 (MQ=255)

                                                             aaTCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgtt                            >  2:228365/1‑93 (MQ=255)

                                                             aaTCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgtt                            <  1:5875374/93‑1 (MQ=255)

                                                                cAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgttgtt                         >  2:1788222/1‑93 (MQ=255)

                                                                cAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgttgtt                         <  2:4812537/93‑1 (MQ=255)

                                                                 aaTGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTa                        >  1:4647039/1‑93 (MQ=255)

                                                                  aTGACTGGCAGCGACCCTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaa                       <  1:3426496/93‑1 (MQ=255)

                                                                  aTGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaa                       <  2:6338811/93‑1 (MQ=255)

                                                                   tGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaaa                      <  1:2085092/93‑1 (MQ=255)

                                                                      cTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAaaca                   >  1:4554437/1‑93 (MQ=255)

                                                                       tGGCAGCAACTCTGCGCGAGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAaacaa                  <  1:34931/93‑1 (MQ=255)

                                                                        ggCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAaacaac                 >  1:1026866/1‑93 (MQ=255)

                                                                        ggCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAaacaac                 <  1:7411093/93‑1 (MQ=255)

                                                                        ggCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAaacaac                 <  1:5663486/93‑1 (MQ=255)

                                                                         gcagcaACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACt                >  1:6754567/1‑93 (MQ=255)

                                                                          cagcaACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTg               <  1:3642869/93‑1 (MQ=255)

                                                                           agcaACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGt              >  2:774521/1‑93 (MQ=255)

                                                                            gcaACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTc             >  1:7145385/1‑93 (MQ=255)

                                                                             caACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCg            >  1:1652138/1‑93 (MQ=255)

                                                                              aaCACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCgg           <  2:3386348/93‑1 (MQ=255)

                                                                              aaCACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCgg           <  1:6257545/93‑1 (MQ=255)

                                                                               acacTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACCAGCTTTTGTTGTTAAAACAACTGTCggt          >  2:6489741/1‑92 (MQ=255)

                                                                                  cTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCg       >  2:5032686/1‑93 (MQ=255)

                                                                                    gcgcgcGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTa     <  2:7620682/93‑1 (MQ=255)

                                                                                     cgcgcgGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTaa    <  2:3667953/93‑1 (MQ=255)

                                                                                      gcgcGGCTGCGTGATGAACATTCCTGGCGTTACGATCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTaaa   <  1:6086513/93‑1 (MQ=255)

                                                                                       cgcgGCTGCGGGATGAACATTCCTGGCGTGACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAAc  <  1:2335743/93‑1 (MQ=255)

GGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAAC  >  NC_000913/3949097‑3949276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 221 total aligned reads displayed.

TCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGC  >  NC_000913/3949094‑3949280

TCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCG                                                                                               <  SRR4302543.4631950/94‑1 (MQ=60)

 CAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGG                                                                                              >  SRR4302543.3048155/1‑94 (MQ=60)

 CAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGG                                                                                              >  SRR4302543.4392927/1‑94 (MQ=60)

 CAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGG                                                                                              >  SRR4302543.5040228/1‑94 (MQ=60)

  AGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGC                                                                                             >  SRR4302543.2576808/1‑94 (MQ=60)

  AGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGC                                                                                             >  SRR4302543.3872820/1‑94 (MQ=60)

  AGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGC                                                                                             >  SRR4302543.4941763/1‑94 (MQ=60)

   GGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTCAATCAATGACTGGCAGCAACACTGCGCGCGGCT                                                                                            >  SRR4302543.7715035/1‑94 (MQ=60)

   GGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCT                                                                                            <  SRR4302543.652524/94‑1 (MQ=60)

   GGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCT                                                                                            <  SRR4302543.5175052/94‑1 (MQ=60)

     CACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGC                                                                                          >  SRR4302543.3483544/1‑94 (MQ=60)

      ACATTTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCG                                                                                         <  SRR4302543.4761331/94‑1 (MQ=60)

      ACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCG                                                                                         >  SRR4302543.2045168/1‑94 (MQ=60)

      ACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGAATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCG                                                                                         <  SRR4302543.3360851/94‑1 (MQ=60)

       CATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGT                                                                                        >  SRR4302543.166406/1‑94 (MQ=60)

       AATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGT                                                                                        <  SRR4302543.824782/94‑1 (MQ=60)

        ATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTG                                                                                       <  SRR4302543.2672102/94‑1 (MQ=60)

        ATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTG                                                                                       >  SRR4302543.3738361/1‑94 (MQ=60)

         TGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGA                                                                                      >  SRR4302543.375961/1‑94 (MQ=60)

          GTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGAT                                                                                     >  SRR4302543.5773994/1‑94 (MQ=60)

          GTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGAT                                                                                     >  SRR4302543.1236573/1‑94 (MQ=60)

          GTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGAT                                                                                     >  SRR4302543.1236572/1‑94 (MQ=60)

          GTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGAAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGAT                                                                                     >  SRR4302543.1319367/1‑94 (MQ=60)

             GCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAA                                                                                  <  SRR4302543.5215140/94‑1 (MQ=60)

             GCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAA                                                                                  <  SRR4302543.3323943/94‑1 (MQ=60)

             GCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAA                                                                                  >  SRR4302543.1313014/1‑94 (MQ=60)

              CATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAAC                                                                                 <  SRR4302543.3767697/94‑1 (MQ=60)

              CATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAAC                                                                                 <  SRR4302543.550173/94‑1 (MQ=60)

              CATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAAC                                                                                 >  SRR4302543.6913932/1‑94 (MQ=60)

              CATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAAA                                                                                 >  SRR4302543.1170897/1‑94 (MQ=60)

               ATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACT                                                                                >  SRR4302543.6966486/1‑94 (MQ=60)

               ATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACA                                                                                >  SRR4302543.2322265/1‑94 (MQ=60)

               ATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACA                                                                                >  SRR4302543.4971657/1‑94 (MQ=60)

                TTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATTACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACAT                                                                               <  SRR4302543.5407967/94‑1 (MQ=60)

                TTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACAT                                                                               <  SRR4302543.3361239/94‑1 (MQ=60)

                 TACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATT                                                                              >  SRR4302543.31535/1‑94 (MQ=60)

                 TACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATT                                                                              <  SRR4302543.5377201/94‑1 (MQ=60)

                 TACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATT                                                                              >  SRR4302543.358273/1‑94 (MQ=60)

                  ACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTC                                                                             >  SRR4302543.4689923/1‑94 (MQ=60)

                    AAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCT                                                                           >  SRR4302543.1476468/1‑94 (MQ=60)

                    AAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCT                                                                           >  SRR4302543.491153/1‑94 (MQ=60)

                    AAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCAGGATGAACATTCCT                                                                           >  SRR4302543.4454390/1‑94 (MQ=60)

                     AGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTG                                                                          >  SRR4302543.2059814/1‑94 (MQ=60)

                     AGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTG                                                                          >  SRR4302543.3052144/1‑94 (MQ=60)

                      GGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGG                                                                         <  SRR4302543.4596135/94‑1 (MQ=60)

                      GGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGG                                                                         <  SRR4302543.763690/94‑1 (MQ=60)

                       GTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGC                                                                        <  SRR4302543.351233/94‑1 (MQ=60)

                        TGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCG                                                                       >  SRR4302543.41982/1‑94 (MQ=60)

                        TGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCG                                                                       >  SRR4302543.2159061/1‑94 (MQ=60)

                        TGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCG                                                                       >  SRR4302543.6642543/1‑94 (MQ=60)

                        TGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCG                                                                       <  SRR4302543.3980898/94‑1 (MQ=60)

                        TGATTTAAATGCTCTGTTACCAGCATTACAGCAACCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCG                                                                       <  SRR4302543.7604861/94‑1 (MQ=60)

                         GATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGT                                                                      >  SRR4302543.6726398/1‑94 (MQ=60)

                          ATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTT                                                                     >  SRR4302543.6326831/1‑94 (MQ=60)

                          ATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTT                                                                     >  SRR4302543.4871202/1‑94 (MQ=60)

                          ATTTAAATGCTCTGTTACAAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTA                                                                     >  SRR4302543.6104082/1‑94 (MQ=60)

                           TTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTA                                                                    <  SRR4302543.6039122/94‑1 (MQ=60)

                           TTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTA                                                                    >  SRR4302543.261105/1‑94 (MQ=60)

                            TTAAATGCTCTGTTCCCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTAC                                                                   <  SRR4302543.1566718/94‑1 (MQ=60)

                            TTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTAC                                                                   >  SRR4302543.3325486/1‑94 (MQ=60)

                            TTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTAC                                                                   <  SRR4302543.4854230/94‑1 (MQ=60)

                             TAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACG                                                                  <  SRR4302543.7031876/94‑1 (MQ=60)

                             TAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACG                                                                  >  SRR4302543.4738314/1‑94 (MQ=60)

                               AATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGAC                                                                <  SRR4302543.5865720/94‑1 (MQ=60)

                                ATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGATC                                                               >  SRR4302543.7753915/1‑94 (MQ=60)

                                ATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACC                                                               >  SRR4302543.593412/1‑94 (MQ=60)

                                ATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACC                                                               <  SRR4302543.5055281/94‑1 (MQ=60)

                                ATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTAGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACT                                                               >  SRR4302543.3740741/1‑94 (MQ=60)

                                 TGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCA                                                              >  SRR4302543.1519579/1‑94 (MQ=60)

                                 TGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCA                                                              >  SRR4302543.7281150/1‑94 (MQ=60)

                                 TGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCA                                                              >  SRR4302543.2866506/1‑94 (MQ=60)

                                  GCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCAT                                                             <  SRR4302543.7830124/94‑1 (MQ=60)

                                  GCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCAT                                                             <  SRR4302543.4582718/94‑1 (MQ=60)

                                   CTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATC                                                            >  SRR4302543.3682661/1‑94 (MQ=60)

                                    TCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGATCATCC                                                           <  SRR4302543.1585903/94‑1 (MQ=60)

                                    TCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCC                                                           >  SRR4302543.278916/1‑94 (MQ=60)

                                     CTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCC                                                          <  SRR4302543.6558894/94‑1 (MQ=60)

                                     CTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCC                                                          <  SRR4302543.144031/94‑1 (MQ=60)

                                     CTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCC                                                          >  SRR4302543.5564138/1‑94 (MQ=60)

                                     CTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCC                                                          >  SRR4302543.7983138/1‑94 (MQ=60)

                                     CTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCC                                                          <  SRR4302543.6402836/94‑1 (MQ=60)

                                     CTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCC                                                          >  SRR4302543.1223627/1‑94 (MQ=60)

                                     CGGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCC                                                          <  SRR4302543.6206106/94‑1 (MQ=60)

                                      TGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCG                                                         <  SRR4302543.7367038/94‑1 (MQ=60)

                                      TGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCG                                                         >  SRR4302543.4499250/1‑94 (MQ=60)

                                       GTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGG                                                        >  SRR4302543.7523376/1‑94 (MQ=60)

                                       GTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGG                                                        >  SRR4302543.1811491/1‑94 (MQ=60)

                                       GTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGG                                                        >  SRR4302543.3882496/1‑94 (MQ=60)

                                        TTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT                                                       <  SRR4302543.852899/94‑1 (MQ=60)

                                        TTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT                                                       <  SRR4302543.7377613/94‑1 (MQ=60)

                                         TACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTG                                                      >  SRR4302543.6226475/1‑94 (MQ=60)

                                         TACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTG                                                      >  SRR4302543.7029433/1‑94 (MQ=60)

                                          TCCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGA                                                     <  SRR4302543.5448912/94‑1 (MQ=60)

                                          ACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGAGGAACATTCCTGGCGTTACGACCATCCCGGTGA                                                     >  SRR4302543.2265064/1‑94 (MQ=60)

                                           cgctcttccgatctccactctAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGAC                                                    <  SRR4302543.3639120/73‑1 (MQ=60)

                                           CCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGAC                                                    <  SRR4302543.1885224/94‑1 (MQ=60)

                                           CCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGAC                                                    <  SRR4302543.1336496/94‑1 (MQ=60)

                                           CCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGAC                                                    >  SRR4302543.1155609/1‑94 (MQ=60)

                                           CCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGAC                                                    >  SRR4302543.4602327/1‑94 (MQ=60)

                                           CCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGAC                                                    >  SRR4302543.2138272/1‑94 (MQ=60)

                                           CCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGAC                                                    >  SRR4302543.7446312/1‑94 (MQ=60)

                                           CCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGAC                                                    <  SRR4302543.1336497/94‑1 (MQ=60)

                                            CAGCATTACAGCAGCCGTTAAATAAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACG                                                   <  SRR4302543.821117/94‑1 (MQ=60)

                                             AGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGATCATCCCGGTGACGC                                                  >  SRR4302543.6093270/1‑94 (MQ=60)

                                                ATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTAT                                               >  SRR4302543.2909117/1‑94 (MQ=60)

                                                ATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTAT                                               <  SRR4302543.5247874/94‑1 (MQ=60)

                                                 TTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGATCATCCCGGTGACGCTATC                                              >  SRR4302543.1190666/1‑94 (MQ=60)

                                                  TACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCT                                             >  SRR4302543.2318743/1‑94 (MQ=60)

                                                    CAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGATCATCCCGGTGACGCTATCTAC                                           <  SRR4302543.3815362/94‑1 (MQ=60)

                                                    CAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAC                                           <  SRR4302543.35553/94‑1 (MQ=60)

                                                    CAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAC                                           <  SRR4302543.6540154/94‑1 (MQ=60)

                                                    CAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAC                                           >  SRR4302543.1213950/1‑94 (MQ=60)

                                                    CAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAC                                           >  SRR4302543.4259388/1‑94 (MQ=60)

                                                     AGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACG                                          >  SRR4302543.7381994/1‑94 (MQ=60)

                                                     AGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACG                                          >  SRR4302543.2762846/1‑94 (MQ=60)

                                                     AGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACG                                          >  SRR4302543.5886807/1‑94 (MQ=60)

                                                     AGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACG                                          <  SRR4302543.3281435/94‑1 (MQ=60)

                                                      GCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGC                                         <  SRR4302543.5105542/94‑1 (MQ=60)

                                                       CAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCG                                        <  SRR4302543.732916/94‑1 (MQ=60)

                                                        AGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGC                                       >  SRR4302543.1158306/1‑94 (MQ=60)

                                                        AGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGC                                       >  SRR4302543.5012604/1‑94 (MQ=60)

                                                         GCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGATCATCCCGGTGACGCTATCTACGCGCC                                      <  SRR4302543.1569734/94‑1 (MQ=60)

                                                         GCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCC                                      >  SRR4302543.8006528/1‑94 (MQ=60)

                                                          GCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCG                                     <  SRR4302543.1890121/94‑1 (MQ=60)

                                                          CCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCG                                     <  SRR4302543.864410/94‑1 (MQ=60)

                                                          CCGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCG                                     <  SRR4302543.5734517/94‑1 (MQ=60)

                                                           CGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGT                                    >  SRR4302543.2822576/1‑94 (MQ=60)

                                                           CGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGT                                    >  SRR4302543.609489/1‑94 (MQ=60)

                                                           CGTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGT                                    >  SRR4302543.5610540/1‑94 (MQ=60)

                                                            GTTAAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGATCATCCCGGTGACGCTATCTACGCGCCGTT                                   >  SRR4302543.4413762/1‑94 (MQ=60)

                                                               AAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGTCGCTATCTACGCGCCGTTGTT                                >  SRR4302543.4955011/1‑94 (MQ=60)

                                                               AAATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTT                                >  SRR4302543.6098505/1‑94 (MQ=60)

                                                                AATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTG                               <  SRR4302543.5928899/94‑1 (MQ=60)

                                                                AATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTG                               >  SRR4302543.758788/1‑94 (MQ=60)

                                                                AATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTG                               <  SRR4302543.6836020/94‑1 (MQ=60)

                                                                 ATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCTCCGTTGTTGT                              >  SRR4302543.6557118/1‑94 (MQ=60)

                                                                 ATCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGT                              >  SRR4302543.4113744/1‑94 (MQ=60)

                                                                  TCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTT                             <  SRR4302543.7281015/94‑1 (MQ=60)

                                                                  TCAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTT                             <  SRR4302543.7973710/94‑1 (MQ=60)

                                                                   CAATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTA                            >  SRR4302543.4689320/1‑94 (MQ=60)

                                                                     ATGACTGGCAGCGACCCTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAA                          <  SRR4302543.3457156/94‑1 (MQ=60)

                                                                     ATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAA                          >  SRR4302543.4364930/1‑94 (MQ=60)

                                                                     ATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAA                          <  SRR4302543.3457157/94‑1 (MQ=60)

                                                                     ATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAA                          >  SRR4302543.4159206/1‑94 (MQ=60)

                                                                     ATGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAA                          >  SRR4302543.469797/1‑94 (MQ=60)

                                                                      TGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAA                         <  SRR4302543.1394297/94‑1 (MQ=60)

                                                                      TGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAA                         <  SRR4302543.2103707/94‑1 (MQ=60)

                                                                      TGACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAA                         <  SRR4302543.6894810/94‑1 (MQ=60)

                                                                       GACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAAC                        >  SRR4302543.7721564/1‑94 (MQ=60)

                                                                        ACTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACA                       >  SRR4302543.4595910/1‑94 (MQ=60)

                                                                         CTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAA                      >  SRR4302543.1765646/1‑94 (MQ=60)

                                                                         CTGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAA                      >  SRR4302543.7169178/1‑94 (MQ=60)

                                                                          TGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAAC                     >  SRR4302543.1035966/1‑94 (MQ=60)

                                                                          TGGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAAC                     <  SRR4302543.6282089/94‑1 (MQ=60)

                                                                           GGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGATCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACT                    <  SRR4302543.6364352/94‑1 (MQ=60)

                                                                           GGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACT                    <  SRR4302543.5715146/94‑1 (MQ=60)

                                                                           GGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACT                    <  SRR4302543.7482203/94‑1 (MQ=60)

                                                                           GGCAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACT                    >  SRR4302543.6818360/1‑94 (MQ=60)

                                                                             CAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGT                  >  SRR4302543.3962341/1‑94 (MQ=60)

                                                                             CAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGT                  <  SRR4302543.3674908/94‑1 (MQ=60)

                                                                             CAGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGT                  <  SRR4302543.310664/94‑1 (MQ=60)

                                                                              AGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTC                 <  SRR4302543.919480/94‑1 (MQ=60)

                                                                              AGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTC                 >  SRR4302543.6725073/1‑94 (MQ=60)

                                                                              AGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTC                 <  SRR4302543.1200709/94‑1 (MQ=60)

                                                                              AGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTC                 >  SRR4302543.302643/1‑94 (MQ=60)

                                                                              AGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTC                 <  SRR4302543.5599898/94‑1 (MQ=60)

                                                                              AGCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTA                 <  SRR4302543.7423709/94‑1 (MQ=60)

                                                                              AGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTC                 >  SRR4302543.7214830/1‑94 (MQ=60)

                                                                               GCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCG                >  SRR4302543.703429/1‑94 (MQ=60)

                                                                               GCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCG                >  SRR4302543.1666918/1‑94 (MQ=60)

                                                                               GCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCG                <  SRR4302543.2662290/94‑1 (MQ=60)

                                                                               GCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCG                <  SRR4302543.4351042/94‑1 (MQ=60)

                                                                               GCAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCG                <  SRR4302543.1569296/94‑1 (MQ=60)

                                                                                CAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGG               >  SRR4302543.7370463/1‑94 (MQ=60)

                                                                                CAACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGG               <  SRR4302543.4897220/94‑1 (MQ=60)

                                                                                 AACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGA              <  SRR4302543.6316569/94‑1 (MQ=60)

                                                                                 AACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGA              >  SRR4302543.5000872/1‑94 (MQ=60)

                                                                                 AACACTGCGCGCGGCTGCGTGATGAACATGCCTGGCGTTACGCCCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGA              <  SRR4302543.2117990/94‑1 (MQ=60)

                                                                                  ACACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGAT             <  SRR4302543.5917535/94‑1 (MQ=60)

                                                                                   CACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATC            >  SRR4302543.1142207/1‑94 (MQ=60)

                                                                                   CACTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATC            <  SRR4302543.5311920/94‑1 (MQ=60)

                                                                                    CCTGCGCGCGGGTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCG           <  SRR4302543.5151631/94‑1 (MQ=60)

                                                                                     CTGCGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGT          >  SRR4302543.7753534/1‑94 (MQ=60)

                                                                                        CGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAA       <  SRR4302543.4974090/94‑1 (MQ=60)

                                                                                        CGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAA       <  SRR4302543.4764475/94‑1 (MQ=60)

                                                                                        CGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAA       <  SRR4302543.1232446/94‑1 (MQ=60)

                                                                                        CGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAA       <  SRR4302543.7379822/94‑1 (MQ=60)

                                                                                        CGCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAA       <  SRR4302543.5785974/94‑1 (MQ=60)

                                                                                         GCGCGGCTGCGTGATGAACATTCCTGGCGTTACGATCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAAC      <  SRR4302543.6144200/94‑1 (MQ=60)

                                                                                         GCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAAC      >  SRR4302543.395618/1‑94 (MQ=60)

                                                                                         GCGCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAAC      <  SRR4302543.1608832/94‑1 (MQ=60)

                                                                                          CGCGGCTGCGGGATGAACATTCCTGGCGTGACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACC     <  SRR4302543.2356937/94‑1 (MQ=60)

                                                                                           GCGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCT    <  SRR4302543.2252182/94‑1 (MQ=60)

                                                                                            CGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTACACCTG   >  SRR4302543.6603728/1‑94 (MQ=60)

                                                                                            CGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTG   >  SRR4302543.5299410/1‑94 (MQ=60)

                                                                                            CGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTG   >  SRR4302543.6603726/1‑94 (MQ=60)

                                                                                            CGGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTG   <  SRR4302543.1144631/94‑1 (MQ=60)

                                                                                             GGCTGGGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGC  <  SRR4302543.5206782/94‑1 (MQ=60)

                                                                                             GGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGC  >  SRR4302543.1374627/1‑94 (MQ=60)

                                                                                             GGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGC  >  SRR4302543.679130/1‑94 (MQ=60)

TCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGC  >  NC_000913/3949094‑3949280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`