Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,953,910	A→G	N320S (AAC→AGC)	ilvA →	threonine deaminase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,953,910	0	A	G	100.0%	1066.8 / NA	345	N320S (AAC→AGC)	ilvA	threonine deaminase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (174/171); total (174/171)

Only 100 of 366 total aligned reads displayed.

CGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAACTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAG  >  NC_000913/3953820‑3953999

cgctggcgctggCGGGAATGAAAGAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCt                                                                                         <  2:4302000/93‑1 (MQ=255)

cgctggcgctggCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCt                                                                                         <  1:4490849/93‑1 (MQ=255)

cgctggcgctggCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCt                                                                                         <  1:6280124/93‑1 (MQ=255)

 gctggcgctggcGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCtt                                                                                        <  1:1616267/93‑1 (MQ=255)

 gctggcgctggcGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCtt                                                                                        <  1:1810753/93‑1 (MQ=255)

 gctggcgctggcGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCtt                                                                                        >  1:5859141/1‑93 (MQ=255)

      cgctggcgGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACg                                                                                   <  1:714992/93‑1 (MQ=255)

         tggcgGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGcc                                                                                >  1:3275795/1‑93 (MQ=255)

           gcgGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGATGGCGCATCTTCTTTCCGGTGCTAACGTGAGCTTCAACGGCCTg                                                                              >  1:3512762/1‑93 (MQ=255)

            cgtgAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTgc                                                                             <  1:1466026/90‑1 (MQ=255)

            cgGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTgc                                                                             >  2:5341854/1‑93 (MQ=255)

             gggAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTgcg                                                                            >  1:3053187/1‑93 (MQ=255)

             gggAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTgcg                                                                            >  2:1250233/1‑93 (MQ=255)

              ggAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTgcgc                                                                           >  1:2288615/1‑93 (MQ=255)

              ggAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTgcgc                                                                           >  2:5444401/1‑93 (MQ=255)

               gAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCt                                                                          >  2:1821812/1‑93 (MQ=255)

                aaTGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTa                                                                         >  2:7725526/1‑93 (MQ=255)

                aaTGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTa                                                                         <  1:4509267/93‑1 (MQ=255)

                 aTGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTAc                                                                        <  2:7087087/93‑1 (MQ=255)

                  tGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTACCGGTGCAAACGAGAGCATCCACGGCCTGCGCTACg                                                                       <  2:7219634/93‑1 (MQ=255)

                   gAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGt                                                                      <  1:2997781/93‑1 (MQ=255)

                    aaaaaaTATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGtc                                                                     >  2:5000765/1‑93 (MQ=255)

                    aaaaaaTATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGtc                                                                     <  1:7916927/93‑1 (MQ=255)

                         atatatCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGa                                                                >  1:6133429/1‑93 (MQ=255)

                         atatatCGCCCTGCACAACATTCGCGGAGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGAGCTACGTCTCAGa                                                                >  2:2054684/1‑93 (MQ=255)

                          tatatCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGaa                                                               <  1:6319865/93‑1 (MQ=255)

                          tatatCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGaa                                                               >  1:5991872/1‑93 (MQ=255)

                            tatCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACg                                                             >  1:3925507/1‑93 (MQ=255)

                            tatCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACg                                                             >  2:911870/1‑93 (MQ=255)

                            tatCGCCCTG‑‑CAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCt                                                           <  1:3403841/93‑1 (MQ=255)

                                gCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATTTTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGc                                                         <  1:7870747/93‑1 (MQ=255)

                                 cccTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCg                                                        >  1:2379180/1‑93 (MQ=255)

                                 cccTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCg                                                        >  2:703028/1‑93 (MQ=255)

                                  ccTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGa                                                       <  2:4105618/93‑1 (MQ=255)

                                   cTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGaa                                                      <  2:1024583/93‑1 (MQ=255)

                                    tGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAAc                                                     <  2:1459820/93‑1 (MQ=255)

                                    tGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAAc                                                     >  2:6923234/1‑93 (MQ=255)

                                    tGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAAc                                                     >  2:605213/1‑93 (MQ=255)

                                     gCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACt                                                    <  1:3190527/93‑1 (MQ=255)

                                     gCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACt                                                    <  1:6511567/93‑1 (MQ=255)

                                      cacaACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTg                                                   <  2:2645906/93‑1 (MQ=255)

                                      cacaACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTg                                                   <  2:2161803/93‑1 (MQ=255)

                                        caacaTTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGGACTggg                                                 >  2:5926837/1‑93 (MQ=255)

                                        caacaTTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTggg                                                 >  2:4550736/1‑93 (MQ=255)

                                        caacaTTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTggg                                                 >  2:4912627/1‑93 (MQ=255)

                                         aacaTTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTgggg                                                >  1:5707506/1‑92 (MQ=255)

                                         aacaTTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGc                                                >  1:1368541/1‑93 (MQ=255)

                                         aacaTTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGAGAACTGGGc                                                >  2:1348204/1‑93 (MQ=255)

                                          acaTTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCg                                               <  1:492769/93‑1 (MQ=255)

                                          acaTTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCg                                               <  1:3336705/93‑1 (MQ=255)

                                          acaTTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCg                                               >  1:4155752/1‑93 (MQ=255)

                                             ttCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGaaa                                            >  1:67013/1‑92 (MQ=255)

                                              tCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGGGAGCTTCCACCGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACa                                           >  2:3325772/1‑93 (MQ=255)

                                               cgcgGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAg                                          <  2:2935385/93‑1 (MQ=255)

                                                gcggcgAACGGCTGGCGCATATTCTTTCCCGTGCCAACGGGAGGTTCTACTGCCTGCGCTTCGCCTCAGAACCCCGCGAACTGGGCGAACAgg                                         >  2:7461518/1‑92 (MQ=255)

                                                  ggcgAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGt                                       <  2:1165115/93‑1 (MQ=255)

                                                     gagcggcggGCGCATATTCTTTCTGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGTGAACAGCGTGaa                                    <  2:5657465/90‑1 (MQ=255)

                                                      aaCGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAg                                   >  1:2430621/1‑93 (MQ=255)

                                                       aCGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAga                                  >  2:5141351/1‑92 (MQ=255)

                                                       aCGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGc                                  <  2:5591388/93‑1 (MQ=255)

                                                       aCGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGc                                  >  1:5265857/1‑93 (MQ=255)

                                                       aCGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGc                                  <  2:3053186/93‑1 (MQ=255)

                                                       aCGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGc                                  <  2:6675921/93‑1 (MQ=255)

                                                          gCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCgtt                               >  1:2786916/1‑93 (MQ=255)

                                                           cTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCgttg                              <  2:7862367/93‑1 (MQ=255)

                                                            tGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCgttgt                             <  1:7336577/93‑1 (MQ=255)

                                                               cgcATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTgg                          <  1:2730277/93‑1 (MQ=255)

                                                                gcATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGc                         <  2:5287462/93‑1 (MQ=255)

                                                                gcATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGc                         >  1:1013700/1‑93 (MQ=255)

                                                                  atatTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGTCgg                       >  1:1987889/1‑93 (MQ=255)

                                                                  atatTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCgg                       >  1:5081774/1‑93 (MQ=255)

                                                                   tatTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGt                      >  2:7840546/1‑93 (MQ=255)

                                                                   tatTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGt                      >  2:4660884/1‑93 (MQ=255)

                                                                   tatTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGt                      >  1:1164234/1‑93 (MQ=255)

                                                                     ttCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGa                    >  2:3359572/1‑93 (MQ=255)

                                                                     ttCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGa                    >  2:1128197/1‑93 (MQ=255)

                                                                      tCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGAc                   <  2:158303/93‑1 (MQ=255)

                                                                       cTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGAcc                  <  1:7235205/93‑1 (MQ=255)

                                                                       cTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGAcc                  <  2:6115992/93‑1 (MQ=255)

                                                                        tttCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCa                 <  2:1702591/93‑1 (MQ=255)

                                                                        tttCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCa                 >  2:7513703/1‑93 (MQ=255)

                                                                        tttCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCa                 <  2:2310680/93‑1 (MQ=255)

                                                                        tttCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCa                 <  1:6903575/93‑1 (MQ=255)

                                                                        tttCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCa                 >  2:2551060/1‑93 (MQ=255)

                                                                        tttCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCa                 <  1:6412526/93‑1 (MQ=255)

                                                                         ttCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCAt                <  2:379992/93‑1 (MQ=255)

                                                                         tcccGGGGCCAACGTGAGCTTCCACGGCCGGCGCTACGTCTAAGAACGCTGCGAACTGGGCG‑ACAGCGTGAAGCGTTGTTGGCGGTGACCAtt               <  1:7662270/91‑1 (MQ=255)

                                                                          tCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCAtt               <  2:6504976/93‑1 (MQ=255)

                                                                           ccGGTGCCAACGTGAGCGTCCACGGACTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTc              <  2:3538846/93‑1 (MQ=255)

                                                                            cGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTcc             <  1:70640/93‑1 (MQ=255)

                                                                             ggTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCg            <  2:486009/93‑1 (MQ=255)

                                                                                 ccAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGgaag        <  1:4829556/93‑1 (MQ=255)

                                                                                 ccAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGgaag        <  2:2443705/93‑1 (MQ=255)

                                                                                    aCGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGaaa     >  1:5555497/1‑93 (MQ=255)

                                                                                     cGTGAGCTTCCACGGCCTGCGCTACGGCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGaaaa    <  1:2185234/93‑1 (MQ=255)

                                                                                      gTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGaaaaa   <  1:7464454/93‑1 (MQ=255)

                                                                                      gTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGaaaaa   <  2:6316999/93‑1 (MQ=255)

                                                                                      gTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGaaaaa   <  1:3649202/93‑1 (MQ=255)

                                                                                       tGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAg  >  1:4612986/1‑93 (MQ=255)

                                                                                       tGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAg  >  2:2848138/1‑93 (MQ=255)

CGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAACTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAG  >  NC_000913/3953820‑3953999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAACTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAGGCA  >  NC_000913/3953819‑3954002

GCGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCT                                                                                            >  SRR4302543.6273884/1‑94 (MQ=60)

 CGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTT                                                                                           <  SRR4302543.6339311/94‑1 (MQ=60)

 CGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTT                                                                                           >  SRR4302543.5912474/1‑94 (MQ=60)

 CGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTT                                                                                           <  SRR4302543.2989995/94‑1 (MQ=60)

 CGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTT                                                                                           <  SRR4302543.4531652/94‑1 (MQ=60)

 CGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTT                                                                                           <  SRR4302543.5815309/94‑1 (MQ=60)

 CGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTT                                                                                           >  SRR4302543.4548072/1‑94 (MQ=60)

  GCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTC                                                                                          <  SRR4302543.1826985/94‑1 (MQ=60)

  GCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTC                                                                                          <  SRR4302543.1630676/94‑1 (MQ=60)

   CTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCC                                                                                         >  SRR4302543.3036489/1‑94 (MQ=60)

   CTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCC                                                                                         <  SRR4302543.7025123/94‑1 (MQ=60)

       CGCTGGCGGGAATGAAGAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGG                                                                                     >  SRR4302543.7781589/1‑94 (MQ=60)

       CGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGG                                                                                     <  SRR4302543.721467/94‑1 (MQ=60)

       CGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCAAATTCTTTTCGGTGACCACGTGAGCTTCCAatg                                                                                     >  SRR4302543.7781590/1‑91 (MQ=60)

        GCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGC                                                                                    <  SRR4302543.2522363/94‑1 (MQ=60)

         CTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCC                                                                                   >  SRR4302543.3305381/1‑94 (MQ=60)

          TGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCT                                                                                  <  SRR4302543.5370065/94‑1 (MQ=60)

          TGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCT                                                                                  >  SRR4302543.3334710/1‑94 (MQ=60)

          TGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCT                                                                                  <  SRR4302543.4577657/94‑1 (MQ=60)

          TGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCT                                                                                  <  SRR4302543.167861/94‑1 (MQ=60)

          TGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCC                                                                                  >  SRR4302543.6383190/1‑94 (MQ=60)

           GGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGATGGCGCATCTTCTTTCCGGTGCTAACGTGAGCTTCAACGGCCTG                                                                                 >  SRR4302543.3544142/1‑94 (MQ=60)

            GCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGC                                                                                <  SRR4302543.1949486/94‑1 (MQ=60)

             CGTGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCG                                                                               <  SRR4302543.1479235/94‑1 (MQ=60)

             CGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCG                                                                               <  SRR4302543.4665220/94‑1 (MQ=60)

             CGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCG                                                                               >  SRR4302543.2112499/1‑94 (MQ=60)

             CGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCG                                                                               >  SRR4302543.3080684/1‑94 (MQ=60)

             CGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCG                                                                               <  SRR4302543.897558/94‑1 (MQ=60)

              GGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGC                                                                              >  SRR4302543.6825167/1‑94 (MQ=60)

              GGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGC                                                                              <  SRR4302543.6999656/94‑1 (MQ=60)

              GGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGC                                                                              >  SRR4302543.6756247/1‑94 (MQ=60)

              GGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGC                                                                              >  SRR4302543.2309512/1‑94 (MQ=60)

                 AATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTAC                                                                           >  SRR4302543.7535490/1‑94 (MQ=60)

                 AATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTAC                                                                           >  SRR4302543.2792747/1‑94 (MQ=60)

                 AATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTAC                                                                           >  SRR4302543.7316598/1‑94 (MQ=60)

                 AATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTAC                                                                           <  SRR4302543.4550272/94‑1 (MQ=60)

                 AATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTAC                                                                           <  SRR4302543.1395277/94‑1 (MQ=60)

                   TGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACCT                                                                         >  SRR4302543.4911620/1‑94 (MQ=60)

                    GAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTC                                                                        <  SRR4302543.3024970/94‑1 (MQ=60)

                     AAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCT                                                                       >  SRR4302543.2445131/1‑94 (MQ=60)

                     AAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCT                                                                       >  SRR4302543.1372981/1‑94 (MQ=60)

                     AAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCT                                                                       <  SRR4302543.7991296/94‑1 (MQ=60)

                      AAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTC                                                                      >  SRR4302543.979479/1‑94 (MQ=60)

                       AAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCA                                                                     >  SRR4302543.5444636/1‑94 (MQ=60)

                       AAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCA                                                                     >  SRR4302543.3276151/1‑94 (MQ=60)

                       AAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCA                                                                     >  SRR4302543.6377755/1‑94 (MQ=60)

                        AAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAG                                                                    >  SRR4302543.6549999/1‑94 (MQ=60)

                        AAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAG                                                                    <  SRR4302543.5941067/94‑1 (MQ=60)

                        AAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAG                                                                    >  SRR4302543.5989101/1‑94 (MQ=60)

                        AAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAG                                                                    >  SRR4302543.6549998/1‑94 (MQ=60)

                         AATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGTGCTACGTCTCAGA                                                                   >  SRR4302543.3532282/1‑94 (MQ=60)

                         AATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGA                                                                   >  SRR4302543.4049691/1‑94 (MQ=60)

                         AATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGA                                                                   >  SRR4302543.6191526/1‑94 (MQ=60)

                         AATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGA                                                                   >  SRR4302543.3517093/1‑94 (MQ=60)

                          ATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAA                                                                  >  SRR4302543.6046790/1‑94 (MQ=60)

                          ATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAA                                                                  >  SRR4302543.6159274/1‑94 (MQ=60)

                          ATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAA                                                                  <  SRR4302543.7221476/94‑1 (MQ=60)

                           TATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAAC                                                                 <  SRR4302543.6395358/94‑1 (MQ=60)

                           TATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAAC                                                                 <  SRR4302543.6379297/94‑1 (MQ=60)

                           TATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAAC                                                                 <  SRR4302543.6379298/94‑1 (MQ=60)

                           TATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAAC                                                                 <  SRR4302543.3795045/94‑1 (MQ=60)

                           TATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAAC                                                                 <  SRR4302543.7326507/94‑1 (MQ=60)

                            ATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACG                                                                >  SRR4302543.1490500/1‑94 (MQ=60)

                            ATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACG                                                                >  SRR4302543.3960152/1‑94 (MQ=60)

                            ATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACG                                                                >  SRR4302543.2017650/1‑94 (MQ=60)

                             TATCGCCCTG‑‑CAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTG                                                             <  SRR4302543.3434327/94‑1 (MQ=60)

                             TATCGCCCCGCACAACATCCGCGGCGAACGGCTGGCACATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGC                                                               <  SRR4302543.3637469/94‑1 (MQ=60)

                               TCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTG                                                             <  SRR4302543.3099569/94‑1 (MQ=60)

                               TCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTG                                                             <  SRR4302543.7282406/94‑1 (MQ=60)

                               TCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCAAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTG                                                             <  SRR4302543.4969748/94‑1 (MQ=60)

                                 GCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATTTTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCG                                                           <  SRR4302543.7944857/94‑1 (MQ=60)

                                 GCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCG                                                           <  SRR4302543.2407243/94‑1 (MQ=60)

                                 GCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCG                                                           <  SRR4302543.1766971/94‑1 (MQ=60)

                                 GCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCG                                                           >  SRR4302543.2400730/1‑94 (MQ=60)

                                  CCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGA                                                          >  SRR4302543.7841889/1‑94 (MQ=60)

                                     TGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACT                                                       <  SRR4302543.3060439/94‑1 (MQ=60)

                                     TGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACT                                                       >  SRR4302543.1289027/1‑94 (MQ=60)

                                      GCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTT                                                      <  SRR4302543.3219297/94‑1 (MQ=60)

                                      GCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTG                                                      <  SRR4302543.6236211/94‑1 (MQ=60)

                                      GCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTG                                                      <  SRR4302543.1432314/94‑1 (MQ=60)

                                      GCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTG                                                      <  SRR4302543.6572901/94‑1 (MQ=60)

                                      GCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTG                                                      >  SRR4302543.712736/1‑94 (MQ=60)

                                       CACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGG                                                     <  SRR4302543.3243150/94‑1 (MQ=60)

                                        ACAACATTCGCGGCGGACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGG                                                    <  SRR4302543.6345107/94‑1 (MQ=60)

                                        ACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGCACCGGG                                                    >  SRR4302543.2923270/1‑94 (MQ=60)

                                        ACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGG                                                    >  SRR4302543.1835169/1‑94 (MQ=60)

                                        ACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGG                                                    >  SRR4302543.6149670/1‑94 (MQ=60)

                                         CAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCACCGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGG                                                   >  SRR4302543.5759337/1‑94 (MQ=60)

                                         CAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGG                                                   >  SRR4302543.5759572/1‑94 (MQ=60)

                                         CAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGG                                                   >  SRR4302543.2330729/1‑94 (MQ=60)

                                         CAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGC                                                   >  SRR4302543.5768684/1‑94 (MQ=60)

                                         CAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGC                                                   >  SRR4302543.1380821/1‑94 (MQ=60)

                                         CAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGC                                                   >  SRR4302543.4319495/1‑94 (MQ=60)

                                         CAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGC                                                   >  SRR4302543.3428295/1‑94 (MQ=60)

                                          AACATTCGCGGCGAACGGCTGGCTCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCG                                                  <  SRR4302543.3574642/94‑1 (MQ=60)

                                          AACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCG                                                  >  SRR4302543.4193330/1‑94 (MQ=60)

                                           ACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGA                                                 <  SRR4302543.497324/94‑1 (MQ=60)

                                           ACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGA                                                 <  SRR4302543.3366769/94‑1 (MQ=60)

                                            CATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGACCTGGGCGAC                                                >  SRR4302543.438521/1‑94 (MQ=60)

                                            CATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAA                                                >  SRR4302543.1061040/1‑94 (MQ=60)

                                            CATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAA                                                >  SRR4302543.1149784/1‑94 (MQ=60)

                                            CATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCCGCGCTACGTCTCAGAAagcggcgacaggcgggaa                                                >  SRR4302543.3853194/1‑76 (MQ=60)

                                             ATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAAC                                               <  SRR4302543.6894354/94‑1 (MQ=60)

                                             ATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAAC                                               <  SRR4302543.2318291/94‑1 (MQ=60)

                                             ATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAAA                                               >  SRR4302543.67612/1‑94 (MQ=60)

                                              TTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACA                                              <  SRR4302543.4379330/94‑1 (MQ=60)

                                               TCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAG                                             <  SRR4302543.3634202/94‑1 (MQ=60)

                                               TCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAG                                             <  SRR4302543.3330301/94‑1 (MQ=60)

                                                CGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGC                                            >  SRR4302543.920624/1‑94 (MQ=60)

                                                CGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGC                                            >  SRR4302543.4102328/1‑94 (MQ=60)

                                                 GCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCG                                           <  SRR4302543.6573893/94‑1 (MQ=60)

                                                     CGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAA                                       <  SRR4302543.1583050/94‑1 (MQ=60)

                                                      GAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAG                                      <  SRR4302543.5281895/94‑1 (MQ=60)

                                                      GAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAG                                      <  SRR4302543.4657324/94‑1 (MQ=60)

                                                      GAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAG                                      >  SRR4302543.2452554/1‑94 (MQ=60)

                                                      GAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAG                                      <  SRR4302543.4638579/94‑1 (MQ=60)

                                                       AACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGC                                     >  SRR4302543.5313364/1‑94 (MQ=60)

                                                        ACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCG                                    <  SRR4302543.5610236/94‑1 (MQ=60)

                                                          GGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTT                                  >  SRR4302543.2812344/1‑94 (MQ=60)

                                                          GGCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTT                                  <  SRR4302543.68079/94‑1 (MQ=60)

                                                           GCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGATCGCTGCGAACTGGGCGAACAGCGTGAAGCGTTG                                 >  SRR4302543.7680775/1‑94 (MQ=60)

                                                           GCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTG                                 <  SRR4302543.585686/94‑1 (MQ=60)

                                                           GCTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTG                                 <  SRR4302543.3704863/94‑1 (MQ=60)

                                                            CTGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGT                                >  SRR4302543.4536807/1‑94 (MQ=60)

                                                             TGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTT                               <  SRR4302543.2555031/94‑1 (MQ=60)

                                                             TGGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTT                               <  SRR4302543.7407155/94‑1 (MQ=60)

                                                              GGCGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCACAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTG                              <  SRR4302543.7183405/94‑1 (MQ=60)

                                                                CGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGGGTTGTTGGG                            >  SRR4302543.6195632/1‑94 (MQ=60)

                                                                CGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGC                            <  SRR4302543.2755126/94‑1 (MQ=60)

                                                                CGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGC                            >  SRR4302543.1022670/1‑94 (MQ=60)

                                                                CGCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGC                            >  SRR4302543.4991553/1‑94 (MQ=60)

                                                                 GCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCG                           >  SRR4302543.7298940/1‑94 (MQ=60)

                                                                 GCATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCG                           >  SRR4302543.7960072/1‑94 (MQ=60)

                                                                  CATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGTCGG                          >  SRR4302543.2005706/1‑94 (MQ=60)

                                                                  CATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGG                          >  SRR4302543.5127860/1‑94 (MQ=60)

                                                                  CATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGG                          >  SRR4302543.2235869/1‑94 (MQ=60)

                                                                  CAGATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCCGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGG                          <  SRR4302543.2100948/94‑1 (MQ=60)

                                                                   ATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGCACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGG                         >  SRR4302543.2662543/1‑94 (MQ=60)

                                                                   ATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGT                         >  SRR4302543.7692345/1‑94 (MQ=60)

                                                                   ATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGT                         >  SRR4302543.4800259/1‑94 (MQ=60)

                                                                   ATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGT                         <  SRR4302543.7696430/94‑1 (MQ=60)

                                                                   ATATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGT                         >  SRR4302543.1174828/1‑94 (MQ=60)

                                                                    TATTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTG                        >  SRR4302543.7324666/1‑94 (MQ=60)

                                                                      TTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGAC                      <  SRR4302543.2405511/94‑1 (MQ=60)

                                                                      TTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGAC                      >  SRR4302543.7452171/1‑94 (MQ=60)

                                                                      TTCTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGAC                      >  SRR4302543.4186903/1‑94 (MQ=60)

                                                                        CTTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCA                    <  SRR4302543.7305266/94‑1 (MQ=60)

                                                                         TTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCAT                   <  SRR4302543.4564426/94‑1 (MQ=60)

                                                                         TTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCAT                   <  SRR4302543.6968445/94‑1 (MQ=60)

                                                                         TTTCCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCAT                   <  SRR4302543.6472912/94‑1 (MQ=60)

                                                                          TCCCGGGGCCAACGTGAGCTTCCACGGCCGGCGCTACGTCTAAGAACGCTGCGAACTGGGCG‑ACAGCGTGAAGCGTTGTTGGCGGTGACCATTC                 <  SRR4302543.7734892/94‑1 (MQ=60)

                                                                            CCGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCC                <  SRR4302543.6487164/94‑1 (MQ=60)

                                                                             CGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCG               >  SRR4302543.5096525/1‑94 (MQ=60)

                                                                             CGGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCG               <  SRR4302543.71284/94‑1 (MQ=60)

                                                                              GGTGCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGG              >  SRR4302543.3253231/1‑94 (MQ=60)

                                                                                 GCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAG           <  SRR4302543.3470216/94‑1 (MQ=60)

                                                                                 GCCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAG           >  SRR4302543.2264336/1‑94 (MQ=60)

                                                                                  CCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGA          <  SRR4302543.4873619/94‑1 (MQ=60)

                                                                                  CCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGA          <  SRR4302543.7973558/94‑1 (MQ=60)

                                                                                  CCAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGA          >  SRR4302543.3330645/1‑94 (MQ=60)

                                                                                   CAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATGCCGG‑AGAAA        >  SRR4302543.1795717/1‑94 (MQ=60)

                                                                                   CAACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACCGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAA         >  SRR4302543.2883218/1‑94 (MQ=60)

                                                                                    AACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAA        >  SRR4302543.7218726/1‑94 (MQ=60)

                                                                                    AACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAA        >  SRR4302543.5606025/1‑94 (MQ=60)

                                                                                     ACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAA       <  SRR4302543.1196700/94‑1 (MQ=60)

                                                                                     ACGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAA       <  SRR4302543.6154638/94‑1 (MQ=60)

                                                                                      CGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAA      >  SRR4302543.1613035/1‑94 (MQ=60)

                                                                                      CGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAA      >  SRR4302543.501849/1‑94 (MQ=60)

                                                                                      CGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAA      <  SRR4302543.3375835/94‑1 (MQ=60)

                                                                                      CGTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAA      <  SRR4302543.2214735/94‑1 (MQ=60)

                                                                                      CGTGAGCTTCCACGGCCTGCGCTACGGCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAA      <  SRR4302543.2204826/94‑1 (MQ=60)

                                                                                       GTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCTAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAG     <  SRR4302543.3091951/94‑1 (MQ=60)

                                                                                       GTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAG     <  SRR4302543.7535961/94‑1 (MQ=60)

                                                                                       GTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAG     <  SRR4302543.5177882/94‑1 (MQ=60)

                                                                                       GTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAG     >  SRR4302543.5242050/1‑94 (MQ=60)

                                                                                       GTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAG     <  SRR4302543.5741900/94‑1 (MQ=60)

                                                                                       GTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAG     >  SRR4302543.4654887/1‑94 (MQ=60)

                                                                                       GTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAG     <  SRR4302543.2806159/94‑1 (MQ=60)

                                                                                       GTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAG     <  SRR4302543.3681274/94‑1 (MQ=60)

                                                                                       GTGAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAG     <  SRR4302543.3058310/94‑1 (MQ=60)

                                                                                         GAGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAGGC   <  SRR4302543.6216808/94‑1 (MQ=60)

                                                                                          AGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAGGCA  <  SRR4302543.754660/94‑1 (MQ=60)

                                                                                          AGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAGGCA  >  SRR4302543.2387685/1‑94 (MQ=60)

                                                                                          AGCTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAGGCA  <  SRR4302543.4858892/94‑1 (MQ=60)

GCGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAACTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAGGCA  >  NC_000913/3953819‑3954002

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`