Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,957,551	+T	intergenic (‑120/‑741)	ppiC ← / → rep	peptidyl‑prolyl cis‑trans isomerase C/rep helicase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,957,550	1	.	T	99.7%	1027.6 / ‑5.5	286	intergenic (‑119/‑742)	ppiC/rep	peptidyl‑prolyl cis‑trans isomerase C/rep helicase
Reads supporting (aligned to +/- strand): ref base . (0/1); major base T (141/143); minor base C (0/1); total (141/145)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.33e-01

Only 100 of 299 total aligned reads displayed.

AGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑T‑GC‑T‑CGCAGGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT  >  NC_000913/3957471‑3957627

aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGT‑ccc                                                                    <  2:3198887/93‑2 (MQ=255)

  cATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGATAAT‑CCGG‑GCTT‑CGCAGGT‑ccctc                                                                  >  2:5644126/1‑90 (MQ=255)

     gATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAg                                                                <  2:3852705/93‑1 (MQ=255)

      aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAgg                                                               <  1:3947108/93‑1 (MQ=255)

      aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAgg                                                               >  2:3378234/1‑93 (MQ=255)

       tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAggg                                                              <  1:3178266/93‑1 (MQ=255)

       tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAggg                                                              >  2:5975651/1‑93 (MQ=255)

         cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGga                                                            >  1:6675462/1‑93 (MQ=255)

          gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGgag                                                           >  2:364921/1‑93 (MQ=255)

           cAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGgaga                                                          <  2:1012947/93‑1 (MQ=255)

            aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGaa                                                         <  2:7488492/93‑1 (MQ=255)

              aTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGaaaa                                                       <  2:4461026/93‑1 (MQ=255)

               tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAAc                                                      >  2:2373865/1‑93 (MQ=255)

               tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAAc                                                      >  1:7340250/1‑93 (MQ=255)

                gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACt                                                     >  1:4931482/1‑93 (MQ=255)

                gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACt                                                     >  1:4734322/1‑93 (MQ=255)

                 cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATTGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACtt                                                    >  2:5280072/1‑93 (MQ=255)

                 cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACtt                                                    >  1:1016958/1‑93 (MQ=255)

                 cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACtt                                                    <  2:6397098/93‑1 (MQ=255)

                  tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTa                                                   >  2:6885328/1‑93 (MQ=255)

                  tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTa                                                   <  2:1915729/93‑1 (MQ=255)

                  caaCGTAATTGTCAGACAAGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GC‑TCCGCAGGTCCCTCAAGGGGAGAAAACTTa                                                   <  1:6379891/92‑1 (MQ=255)

                   agcGTAATTGTCAGTCAGGGAGTGGCTGTTACATATATGGCAAAAGCCCGGAAAAA‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAg                                                  <  2:4695108/91‑1 (MQ=255)

                   aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAg                                                  <  2:6156502/93‑1 (MQ=255)

                   aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAg                                                  <  1:7862306/93‑1 (MQ=255)

                   aaCGTAATTGTCAGTCAGGGAGCGGCTGGGGCATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAg                                                  >  2:331943/1‑93 (MQ=255)

                    aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAgg                                                 <  2:2526323/93‑1 (MQ=255)

                    aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAgg                                                 >  1:2266842/1‑93 (MQ=255)

                    aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAgg                                                 >  2:414246/1‑93 (MQ=255)

                     cGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAAATTAggg                                                >  2:3024452/1‑93 (MQ=255)

                      gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGc                                               >  2:6954633/1‑93 (MQ=255)

                      gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGc                                               <  1:2834348/93‑1 (MQ=255)

                       tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGcc                                              <  1:823182/93‑1 (MQ=255)

                        aaTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCct                                             >  1:4623059/1‑93 (MQ=255)

                        aaTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCct                                             >  1:5152088/1‑93 (MQ=255)

                         aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCctc                                            <  1:1187606/93‑1 (MQ=255)

                          ttGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCC‑G‑GCTT‑CGCAGGTCCCTCCAGGGGTGAAAACTTAGGGCctct                                           >  2:904281/1‑93 (MQ=255)

                          ttGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCctct                                           >  1:1395017/1‑93 (MQ=255)

                           tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTa                                          <  1:2973049/93‑1 (MQ=255)

                            gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt                                         <  1:6884597/93‑1 (MQ=255)

                            gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt                                         <  2:1025249/93‑1 (MQ=255)

                             tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCCAGGGGAGAAAACTTAGGGCCTCTTTg                                        >  1:6958774/1‑93 (MQ=255)

                             tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg                                        <  2:4414582/93‑1 (MQ=255)

                             tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg                                        <  2:705691/93‑1 (MQ=255)

                             tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg                                        <  1:3865050/93‑1 (MQ=255)

                             tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg                                        <  2:6714198/93‑1 (MQ=255)

                             tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGGCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg                                        <  2:5383523/93‑1 (MQ=255)

                               agtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATggg                                      >  2:2477588/1‑93 (MQ=255)

                                gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc                                     <  1:5519262/93‑1 (MQ=255)

                                 tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt                                    >  1:1697314/1‑93 (MQ=255)

                                 tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt                                    <  2:6523225/93‑1 (MQ=255)

                                 tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt                                    >  1:598675/1‑93 (MQ=255)

                                  cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTa                                   <  2:7535113/93‑1 (MQ=255)

                                   agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc                                  >  1:63430/1‑93 (MQ=255)

                                   agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc                                  >  2:7179247/1‑93 (MQ=255)

                                    gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa                                 <  2:226591/93‑1 (MQ=255)

                                    gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa                                 >  2:2224101/1‑93 (MQ=255)

                                    gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa                                 >  2:32648/1‑93 (MQ=255)

                                    gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa                                 >  1:2042940/1‑93 (MQ=255)

                                     ggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaa                                <  1:7429987/93‑1 (MQ=255)

                                      gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa                               <  2:1215628/93‑1 (MQ=255)

                                      gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa                               <  2:2873017/93‑1 (MQ=255)

                                         tGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGGCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc                            >  1:5772427/1‑93 (MQ=255)

                                          ggCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa                           <  2:1539195/93‑1 (MQ=255)

                                           gCTGGTACATATATGGTAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt                          <  2:5179412/93‑1 (MQ=255)

                                           gCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt                          <  2:5701422/93‑1 (MQ=255)

                                           gCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt                          >  1:5268562/1‑93 (MQ=255)

                                            cTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt                         <  1:1307521/93‑1 (MQ=255)

                                            cTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt                         <  1:448682/93‑1 (MQ=255)

                                             tGGTACATATATGGCAAAAGCCCGGGAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa                        <  2:5135937/93‑1 (MQ=255)

                                             tGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa                        <  1:2390388/93‑1 (MQ=255)

                                              ggTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt                       <  1:7142401/93‑1 (MQ=255)

                                              ggTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt                       <  1:6165937/93‑1 (MQ=255)

                                                tACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg                     <  2:6243400/93‑1 (MQ=255)

                                                tACATATACGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg                     <  1:5086729/93‑1 (MQ=255)

                                                 aCATATATGGAAAAAGCCGGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg                    <  2:2836171/93‑1 (MQ=255)

                                                  cATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg                   >  1:7687587/1‑93 (MQ=255)

                                                   atatatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg                  >  2:2760747/1‑93 (MQ=255)

                                                    tatatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa                 >  2:1704657/1‑93 (MQ=255)

                                                    tatatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa                 >  1:3093287/1‑93 (MQ=255)

                                                      tatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg               >  1:1103232/1‑93 (MQ=255)

                                                      tatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg               >  1:3033570/1‑93 (MQ=255)

                                                        tGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt             <  2:5548878/93‑1 (MQ=255)

                                                        tGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt             >  2:7609268/1‑93 (MQ=255)

                                                          gCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta           >  2:4933352/1‑93 (MQ=255)

                                                           cAAAAGCCGGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat          <  1:5569400/93‑1 (MQ=255)

                                                           cAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat          <  1:4368706/93‑1 (MQ=255)

                                                            aaaaGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt         <  2:2131257/93‑1 (MQ=255)

                                                            aaaaGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt         >  1:7402266/1‑93 (MQ=255)

                                                            aaaaGCCCGGAAAAT‑CC‑GGGCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt         >  1:1146561/1‑93 (MQ=255)

                                                            aaaaGCCCGGAAAAT‑CC‑GGGCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCACTATCGGGGATGGttatt         >  2:7013300/1‑93 (MQ=255)

                                                             aaaGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt        >  1:4037987/1‑93 (MQ=255)

                                                             aaaGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt        >  2:3104555/1‑93 (MQ=255)

                                                               aGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta      <  2:4901037/93‑1 (MQ=255)

                                                                gCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat     >  2:6476595/1‑93 (MQ=255)

                                                                 cccGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt    <  2:1144544/93‑1 (MQ=255)

                                                                  ccGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg   >  2:4046988/1‑93 (MQ=255)

                                                                  ccGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg   >  1:2567450/1‑93 (MQ=255)

                                                                  ccGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg   >  1:1568677/1‑93 (MQ=255)

                                                                  ccGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg   <  2:7837778/93‑1 (MQ=255)

AGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑T‑GC‑T‑CGCAGGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT  >  NC_000913/3957471‑3957627

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑TG‑‑C‑‑T‑CGCAGGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGAT  >  NC_000913/3957478‑3957642

TCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGG                                                                            <  SRR4302543.3206911/94‑1 (MQ=60)

 CCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGA                                                                           >  SRR4302543.6738488/1‑94 (MQ=60)

 CCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGA                                                                           <  SRR4302543.821600/94‑1 (MQ=60)

  CGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAG                                                                          >  SRR4302543.3158707/1‑94 (MQ=60)

   GCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGA                                                                         <  SRR4302543.4692787/94‑1 (MQ=60)

     AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCCAGGGGAGAAA                                                                       >  SRR4302543.1143234/1‑94 (MQ=60)

      GATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCGAGGGGAGAAAA                                                                      >  SRR4302543.4657408/1‑94 (MQ=60)

       ATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAAC                                                                     >  SRR4302543.7410866/1‑94 (MQ=60)

       ATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAAC                                                                     <  SRR4302543.5067932/94‑1 (MQ=60)

       ATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAAC                                                                     >  SRR4302543.5591915/1‑94 (MQ=60)

        TGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGGAAACT                                                                    >  SRR4302543.4506441/1‑94 (MQ=60)

        TGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACT                                                                    >  SRR4302543.4777591/1‑94 (MQ=60)

        TGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACT                                                                    >  SRR4302543.4976400/1‑94 (MQ=60)

        TGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACT                                                                    >  SRR4302543.7244276/1‑94 (MQ=60)

        TGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACT                                                                    <  SRR4302543.3015399/94‑1 (MQ=60)

         GCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTT                                                                   >  SRR4302543.1025953/1‑94 (MQ=60)

          CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTA                                                                  >  SRR4302543.2312650/1‑94 (MQ=60)

          CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTA                                                                  >  SRR4302543.2170059/1‑94 (MQ=60)

          CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTA                                                                  >  SRR4302543.6363841/1‑94 (MQ=60)

          CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTA                                                                  >  SRR4302543.4022162/1‑94 (MQ=60)

           TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAG                                                                 <  SRR4302543.6439917/94‑1 (MQ=60)

           TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAG                                                                 <  SRR4302543.3103903/94‑1 (MQ=60)

           TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAG                                                                 <  SRR4302543.6161410/94‑1 (MQ=60)

           CAACGTAATTGTCAGACAAGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGGG‑‑C‑‑TCCGCAGGTCCCTCAAGGGGAGAAAACTTAG                                                                 <  SRR4302543.6439918/94‑1 (MQ=60)

            AACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGG                                                                <  SRR4302543.1742777/94‑1 (MQ=60)

            AACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGG                                                                >  SRR4302543.6283922/1‑94 (MQ=60)

            AACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGG                                                                <  SRR4302543.7936356/94‑1 (MQ=60)

            AACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGG                                                                >  SRR4302543.2287537/1‑94 (MQ=60)

               GTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCC                                                             <  SRR4302543.2860271/94‑1 (MQ=60)

               GTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCC                                                             >  SRR4302543.5500202/1‑94 (MQ=60)

               GTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCC                                                             >  SRR4302543.1376569/1‑94 (MQ=60)

                TAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCT                                                            >  SRR4302543.4665061/1‑94 (MQ=60)

                TAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCT                                                            >  SRR4302543.5198651/1‑94 (MQ=60)

                TAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCT                                                            >  SRR4302543.5161328/1‑94 (MQ=60)

                TAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCT                                                            <  SRR4302543.830442/94‑1 (MQ=60)

                  ATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCT                                                          <  SRR4302543.1198321/94‑1 (MQ=60)

                  ATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCT                                                          >  SRR4302543.1407593/1‑94 (MQ=60)

                  ATTGTCAGGCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCT                                                          <  SRR4302543.5221604/94‑1 (MQ=60)

                    TGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAT                                                        <  SRR4302543.4930178/94‑1 (MQ=60)

                    TGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAT                                                        <  SRR4302543.3000044/94‑1 (MQ=60)

                     GTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCCAGGGGAGAAAACTTAGGGCCTCTTTG                                                       >  SRR4302543.7024249/1‑94 (MQ=60)

                     GTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATG                                                       <  SRR4302543.6949361/94‑1 (MQ=60)

                     GTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATG                                                       <  SRR4302543.1322395/94‑1 (MQ=60)

                     GTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATG                                                       >  SRR4302543.1183382/1‑94 (MQ=60)

                     GTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATG                                                       >  SRR4302543.5273310/1‑94 (MQ=60)

                     GTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATG                                                       >  SRR4302543.7023996/1‑94 (MQ=60)

                      TCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGG                                                      <  SRR4302543.3899190/94‑1 (MQ=60)

                       CAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGG                                                     >  SRR4302543.4726880/1‑94 (MQ=60)

                       CAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGG                                                     <  SRR4302543.3344900/94‑1 (MQ=60)

                        AGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGC                                                    >  SRR4302543.741429/1‑94 (MQ=60)

                        AGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGC                                                    >  SRR4302543.4032912/1‑94 (MQ=60)

                        AGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGC                                                    <  SRR4302543.302958/94‑1 (MQ=60)

                         GTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCT                                                   >  SRR4302543.1712533/1‑94 (MQ=60)

                         GTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCT                                                   >  SRR4302543.604161/1‑94 (MQ=60)

                         GTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCT                                                   <  SRR4302543.5569392/94‑1 (MQ=60)

                           CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC                                                 >  SRR4302543.749344/1‑94 (MQ=60)

                           CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC                                                 >  SRR4302543.4216177/1‑94 (MQ=60)

                           CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC                                                 >  SRR4302543.63986/1‑94 (MQ=60)

                            AGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACA                                                >  SRR4302543.2061259/1‑94 (MQ=60)

                              GGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAA                                              <  SRR4302543.7501229/94‑1 (MQ=60)

                              GGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAA                                              <  SRR4302543.897369/94‑1 (MQ=60)

                                 GTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTC                                           <  SRR4302543.2318274/94‑1 (MQ=60)

                                 GTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTC                                           >  SRR4302543.5824974/1‑94 (MQ=60)

                                   GGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAT                                         >  SRR4302543.5622739/1‑94 (MQ=60)

                                   GGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAT                                         >  SRR4302543.5316096/1‑94 (MQ=60)

                                    GCTGGTACATATATGGCAAAAGCCCGAAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATT                                        <  SRR4302543.3157275/94‑1 (MQ=60)

                                     CTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTA                                       <  SRR4302543.452872/94‑1 (MQ=60)

                                     CTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTA                                       >  SRR4302543.2829207/1‑94 (MQ=60)

                                     CTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTA                                       <  SRR4302543.1319137/94‑1 (MQ=60)

                                     CTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTA                                       >  SRR4302543.7487292/1‑94 (MQ=60)

                                     CTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTA                                       <  SRR4302543.4145250/94‑1 (MQ=60)

                                     CTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GG‑‑CCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTA                                       <  SRR4302543.7024835/94‑1 (MQ=60)

                                      TGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                                      <  SRR4302543.1623988/94‑1 (MQ=60)

                                      TGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                                      <  SRR4302543.2903782/94‑1 (MQ=60)

                                      TGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                                      <  SRR4302543.2412020/94‑1 (MQ=60)

                                       GGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                     <  SRR4302543.5968994/94‑1 (MQ=60)

                                       GGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                     <  SRR4302543.1225801/94‑1 (MQ=60)

                                       GGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                     <  SRR4302543.7012565/94‑1 (MQ=60)

                                       GGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                     <  SRR4302543.7211803/94‑1 (MQ=60)

                                       GGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                     <  SRR4302543.5195371/94‑1 (MQ=60)

                                       GGTACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                     <  SRR4302543.6224282/94‑1 (MQ=60)

                                         TACATATATGGCAAAAGCCCGGAAACTCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG                                   <  SRR4302543.1544573/94‑1 (MQ=60)

                                         TACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG                                   <  SRR4302543.7717590/94‑1 (MQ=60)

                                         TACATATACGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG                                   <  SRR4302543.5132843/94‑1 (MQ=60)

                                          ACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG                                  >  SRR4302543.7760385/1‑94 (MQ=60)

                                          ACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG                                  >  SRR4302543.7748030/1‑94 (MQ=60)

                                          ACATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG                                  <  SRR4302543.7842963/94‑1 (MQ=60)

                                           CATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG                                 <  SRR4302543.6437965/94‑1 (MQ=60)

                                           CATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG                                 <  SRR4302543.1111138/94‑1 (MQ=60)

                                           CATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG                                 >  SRR4302543.2947722/1‑94 (MQ=60)

                                            ATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGA                                >  SRR4302543.3121105/1‑94 (MQ=60)

                                            ATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGA                                >  SRR4302543.1728331/1‑94 (MQ=60)

                                            ATATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGA                                >  SRR4302543.6192148/1‑94 (MQ=60)

                                             TATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAT                               >  SRR4302543.114063/1‑94 (MQ=60)

                                             TATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAT                               <  SRR4302543.7137388/94‑1 (MQ=60)

                                              ATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG                              >  SRR4302543.1113178/1‑94 (MQ=60)

                                              ATATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG                              >  SRR4302543.3060956/1‑94 (MQ=60)

                                                ATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGT                            <  SRR4302543.5373082/94‑1 (MQ=60)

                                                ATGGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGT                            >  SRR4302543.2254224/1‑94 (MQ=60)

                                                  GGCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTA                          >  SRR4302543.4612314/1‑94 (MQ=60)

                                                   GCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTAT                         <  SRR4302543.1191650/94‑1 (MQ=60)

                                                   GCAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTAT                         <  SRR4302543.7243908/94‑1 (MQ=60)

                                                    CAAAAGCCGGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT                        <  SRR4302543.5620075/94‑1 (MQ=60)

                                                    CAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT                        >  SRR4302543.6912513/1‑94 (MQ=60)

                                                    CAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT                        >  SRR4302543.1157008/1‑94 (MQ=60)

                                                    CAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT                        <  SRR4302543.4408275/94‑1 (MQ=60)

                                                    CAAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT                        >  SRR4302543.7473321/1‑94 (MQ=60)

                                                     AAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGTCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTT                       >  SRR4302543.3955502/1‑94 (MQ=60)

                                                     AAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTT                       >  SRR4302543.4074125/1‑94 (MQ=60)

                                                     AAAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTT                       <  SRR4302543.3964687/94‑1 (MQ=60)

                                                      AAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTT                      <  SRR4302543.2583382/94‑1 (MQ=60)

                                                      AAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTT                      >  SRR4302543.6846229/1‑94 (MQ=60)

                                                      AAAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTT                      <  SRR4302543.2810858/94‑1 (MQ=60)

                                                       AAGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTA                     >  SRR4302543.7982055/1‑94 (MQ=60)

                                                        AGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTAT                    <  SRR4302543.5072055/94‑1 (MQ=60)

                                                        AGCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTAT                    >  SRR4302543.5979362/1‑94 (MQ=60)

                                                         GCCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATT                   <  SRR4302543.126405/94‑1 (MQ=60)

                                                          CCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTG                  >  SRR4302543.4895292/1‑94 (MQ=60)

                                                          CCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTG                  >  SRR4302543.2590892/1‑94 (MQ=60)

                                                          CCCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTG                  >  SRR4302543.1582685/1‑94 (MQ=60)

                                                           agcacggaaaatccgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTAT                    <  SRR4302543.255185/75‑1 (MQ=60)

                                                           CCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT                 >  SRR4302543.5573755/1‑94 (MQ=60)

                                                           CCGGAAAATCC‑GGGCT‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT                 >  SRR4302543.4172971/1‑94 (MQ=60)

                                                               cggaaaatccgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTC                >  SRR4302543.7470683/16‑94 (MQ=60)

                                                               cggaaaatccgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTC                >  SRR4302543.1879538/16‑94 (MQ=60)

                                                                ggaaaatccgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCA               >  SRR4302543.6671748/15‑94 (MQ=60)

                                                                ggaaaatccgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCA               >  SRR4302543.5912111/15‑94 (MQ=60)

                                                                  aaaatccgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAAT             <  SRR4302543.5676207/82‑1 (MQ=60)

                                                                  aaaatccgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAAT             <  SRR4302543.5693999/82‑1 (MQ=60)

                                                                  aaaatccgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAAT             <  SRR4302543.135918/82‑1 (MQ=60)

                                                                    aatccgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTT           <  SRR4302543.4714338/84‑1 (MQ=60)

                                                                     atccgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTA          <  SRR4302543.927225/85‑1 (MQ=60)

                                                                     atccgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTA          >  SRR4302543.6361846/10‑94 (MQ=60)

                                                                     atccgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTA          <  SRR4302543.4572968/85‑1 (MQ=60)

                                                                       ccgggctT‑CGCAGGTCCCTCAAGGGGAGCAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATG        >  SRR4302543.6350375/8‑94 (MQ=60)

                                                                       ccgggctT‑CGCAGGTCCCTCAAGGGGAGAAAGCTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATG        <  SRR4302543.6094663/87‑1 (MQ=60)

                                                                       ccgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATG        <  SRR4302543.6609704/87‑1 (MQ=60)

                                                                       ccgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATG        >  SRR4302543.6298085/8‑94 (MQ=60)

                                                                       ccgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATG        >  SRR4302543.7382602/8‑94 (MQ=60)

                                                                        cgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGA       >  SRR4302543.1732957/7‑94 (MQ=60)

                                                                        cgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGA       <  SRR4302543.4541667/88‑1 (MQ=60)

                                                                        cgggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGA       >  SRR4302543.1723134/7‑94 (MQ=60)

                                                                        cgggcgT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGA       <  SRR4302543.5499512/88‑1 (MQ=60)

                                                                         gggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAG      <  SRR4302543.7427612/89‑1 (MQ=60)

                                                                         gggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAG      <  SRR4302543.5125603/89‑1 (MQ=60)

                                                                         gggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAG      >  SRR4302543.6415158/6‑94 (MQ=60)

                                                                          ggctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGC     <  SRR4302543.4423974/90‑1 (MQ=60)

                                                                           T‑‑T‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGAT  <  SRR4302543.7380634/94‑1 (MQ=60)

                                                                            ctT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGA   <  SRR4302543.2243621/92‑1 (MQ=60)

TCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑TG‑‑C‑‑T‑CGCAGGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGAT  >  NC_000913/3957478‑3957642

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`