Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 3,968,317 +CGT coding (612/1170 nt) wecB → UDP‑N‑acetyl glucosamine ‑2‑epimerase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 39683170 (0.000)378 (1.270)
+CGT
148/178 0.0 100% coding (612/1170 nt) wecB UDP‑N‑acetyl glucosamine ‑2‑epimerase
?NC_000913 3968318 = 0 (0.000)coding (613/1170 nt) wecB UDP‑N‑acetyl glucosamine ‑2‑epimerase

Only 100 of 399 total aligned reads displayed.

ACGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3968226‑3968317
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTT  >  NC_000913/3968318‑3968409
                                                                                            |||                                                                                            
ACGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGC                                                                                                <  1:3378219/93‑1
 CGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCG                                                                                               >  2:1104685/1‑93
  GTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGT                                                                                              >  1:4707757/1‑93
  GTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGT                                                                                              >  2:5558533/1‑93
  GTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGT                                                                                              >  2:4928461/1‑93
  GTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGT                                                                                              <  1:1959925/93‑1
   TTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTT                                                                                             >  1:3873397/1‑93
    TGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTC                                                                                            >  2:1779794/1‑93
       GGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGA                                                                                         <  1:7466576/93‑1
        GATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAA                                                                                        >  2:5187575/1‑93
        GATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAA                                                                                        >  1:251935/1‑93
        GATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAA                                                                                        >  2:3683942/1‑93
        GATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAA                                                                                        <  1:4357875/93‑1
        GATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAA                                                                                        >  1:3358608/1‑93
        GATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAA                                                                                        >  2:3026802/1‑93
         ATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAAC                                                                                       <  1:3534788/93‑1
          TAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACT                                                                                      >  1:6121298/1‑93
            GCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGG                                                                                    <  1:5045713/93‑1
            GCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGG                                                                                    >  2:4777658/1‑93
            GCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGG                                                                                    <  2:6405608/93‑1
            GCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGG                                                                                    >  2:1858889/1‑93
            GCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGG                                                                                    <  2:2645209/93‑1
              CGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCG                                                                                  >  1:1812051/1‑93
                    TTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTTAGAACTGGCGGCAAAT                                                                            >  1:6597766/1‑93
                    TTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAAT                                                                            >  1:2147199/1‑93
                    TTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAAT                                                                            >  2:6037101/1‑93
                    TTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGAAAgt                                                                            >  2:1388494/1‑91
                       ATTACCGGTAATACAGTCATTGATGCCCTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTAC                                                                         <  1:4601178/93‑1
                       ATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTAC                                                                         <  2:427252/93‑1
                       ATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTAC                                                                         <  1:7687249/93‑1
                         TACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCC                                                                       <  1:6739005/93‑1
                           CCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGT                                                                     >  2:3659223/1‑93
                            CGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTT                                                                    <  1:3699081/93‑1
                            CGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTT                                                                    <  1:2958184/93‑1
                              GTAATACAGTCATTGATGCATTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCATTCAGAACTGGCGGCAAATTACCCGTTTA                                                                  <  2:4837573/93‑1
                               TAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTAT                                                                 >  2:3204027/1‑93
                                AATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATC                                                                <  2:1534365/93‑1
                                  TACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGA                                                              >  2:7615692/1‑93
                                  TACAGTCATTGATGCACTGTTATGGGTGCGCGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGc                                                              >  2:6743911/1‑92
                                   ACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGAC                                                             >  2:2090542/1‑93
                                     AGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCC                                                           >  1:1166767/1‑93
                                      GTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGGCAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCC                                                          >  2:732921/1‑93
                                       TCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCG                                                         >  2:382850/1‑93
                                       TCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCG                                                         >  1:2815780/1‑93
                                       TCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCG                                                         >  2:2245919/1‑93
                                        CATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGA                                                        >  1:1410885/1‑93
                                        CATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGA                                                        >  2:1950064/1‑93
                                         ATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGAT                                                       >  2:2159490/1‑93
                                          TTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATA                                                      >  2:3170574/1‑93
                                           TGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAA                                                     >  2:4600144/1‑93
                                                 ACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGAT                                               <  2:5050681/93‑1
                                                 ACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGAT                                               >  2:2389230/1‑93
                                                 ACTGTTATGGGTGCGTGACCAGGGGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGAT                                               >  2:3769278/1‑93
                                                  CTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATG                                              >  2:6837873/1‑93
                                                  CTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATG                                              <  2:5745513/93‑1
                                                  CTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATG                                              <  1:4498493/93‑1
                                                  CTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATG                                              >  2:1626248/1‑93
                                                   TGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGA                                             <  1:2631942/93‑1
                                                   TGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGA                                             >  1:3204473/1‑93
                                                    GTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGAT                                            >  2:6246183/1‑93
                                                    GTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGAT                                            >  1:5992468/1‑93
                                                     TTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATT                                           <  2:6558663/93‑1
                                                     TTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATT                                           <  1:1564358/93‑1
                                                     TTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATT                                           >  1:4780910/1‑93
                                                      TATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACTCCGATAAAAAGATGATTC                                          >  1:3964815/1‑93
                                                      TATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTC                                          >  2:7885636/1‑93
                                                       ATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCT                                         <  2:3532121/93‑1
                                                        TGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTG                                        >  2:2865011/1‑93
                                                         GGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGG                                       <  1:6967601/93‑1
                                                         GGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGG                                       <  2:4083165/93‑1
                                                            TGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGA                                    <  1:7586522/93‑1
                                                             GCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGAC                                   >  2:7447598/1‑93
                                                               GTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCG                                 <  1:5651742/93‑1
                                                                TGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGG                                <  1:3930784/93‑1
                                                                  ACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTC                              >  1:3135139/1‑93
                                                                    CAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCAC                            >  1:7079049/1‑93
                                                                    CAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCAC                            <  1:224750/93‑1
                                                                    CAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCAC                            <  2:2687986/93‑1
                                                                    CAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCAC                            >  1:6356780/1‑93
                                                                     AGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACA                           >  2:7295862/1‑93
                                                                     AGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACA                           >  1:5438033/1‑93
                                                                      GGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAG                          <  1:5279615/93‑1
                                                                        TGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGC                        <  1:1020435/93‑1
                                                                           TGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTG                     >  1:7147532/1‑93
                                                                             AGCAGCGACAAGCCGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAG                   <  2:3563359/93‑1
                                                                              GCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGA                  <  2:3461443/93‑1
                                                                                AGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGT                >  1:2205157/1‑93
                                                                                 GCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTT               <  2:7065671/93‑1
                                                                                 GCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTT               >  1:7875318/1‑93
                                                                                  CGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTT              <  1:1898217/93‑1
                                                                                   GACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTC             <  1:1240860/93‑1
                                                                                    ACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCG            >  1:2354606/1‑93
                                                                                     CAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGG           <  1:6846196/93‑1
                                                                                     CAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGG           >  2:1307565/1‑93
                                                                                       AGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTC         >  2:5501619/1‑93
                                                                                        GCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCG        >  1:17062/1‑93
                                                                                        GCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCG        >  1:6449164/1‑93
                                                                                         CTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGT       <  2:824471/93‑1
                                                                                           GCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGG     >  1:4092209/1‑93
                                                                                           GCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTC             >  2:2302784/1‑85
                                                                                            |||                                                                                            
ACGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3968226‑3968317
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTT  >  NC_000913/3968318‑3968409

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AAACGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTG‑‑‑TCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTT  >  NC_000913/3968224‑3968410
                                                                                             |                                                                                                
AAACGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTG                                                                                                  <  SRR4302543.4923564/94‑1 (MQ=60)
  ACGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcg                                                                                                <  SRR4302543.3408539/94‑3 (MQ=60)
   CGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgt                                                                                               >  SRR4302543.4306983/1‑91 (MQ=60)
   CGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgt                                                                                               >  SRR4302543.2994193/1‑91 (MQ=60)
   CGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgt                                                                                               >  SRR4302543.4750777/1‑91 (MQ=60)
    GTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgtt                                                                                              >  SRR4302543.319029/1‑90 (MQ=60)
    GTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgtt                                                                                              <  SRR4302543.1977505/94‑5 (MQ=60)
    GTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgtt                                                                                              >  SRR4302543.3907596/1‑90 (MQ=60)
    GTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgtt                                                                                              >  SRR4302543.7740065/1‑90 (MQ=60)
     TTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGTGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttc                                                                                             <  SRR4302543.2665096/94‑6 (MQ=60)
      TGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttca                                                                                            <  SRR4302543.5795186/94‑7 (MQ=60)
      TGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttca                                                                                            >  SRR4302543.5435586/1‑88 (MQ=60)
      TGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttca                                                                                            <  SRR4302543.4001746/94‑7 (MQ=60)
       GCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGcgttcag                                                                                           <  SRR4302543.189448/94‑8 (MQ=60)
         GGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAA                                                                                         >  SRR4302543.254128/1‑94 (MQ=60)
         GGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAA                                                                                         >  SRR4302543.6298741/1‑94 (MQ=60)
         GGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAA                                                                                         >  SRR4302543.3388820/1‑94 (MQ=60)
         GGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAA                                                                                         >  SRR4302543.3418138/1‑94 (MQ=60)
         GGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAA                                                                                         <  SRR4302543.7538090/94‑1 (MQ=60)
          GATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAGGCTGCGTTCAGAAC                                                                                        >  SRR4302543.1938830/1‑94 (MQ=60)
          GATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAAC                                                                                        <  SRR4302543.1679164/94‑1 (MQ=60)
          GATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAAC                                                                                        <  SRR4302543.3959511/94‑1 (MQ=60)
          GATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAAC                                                                                        <  SRR4302543.6826594/94‑1 (MQ=60)
          GATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAAC                                                                                        <  SRR4302543.4397364/94‑1 (MQ=60)
          GATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAAC                                                                                        <  SRR4302543.6826595/94‑1 (MQ=60)
           ATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACT                                                                                       >  SRR4302543.3991048/1‑94 (MQ=60)
           ATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACT                                                                                       >  SRR4302543.6179273/1‑94 (MQ=60)
           ATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACT                                                                                       <  SRR4302543.3566241/94‑1 (MQ=60)
           ATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACT                                                                                       <  SRR4302543.2861211/94‑1 (MQ=60)
           ATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACT                                                                                       <  SRR4302543.3189494/94‑1 (MQ=60)
           ATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACT                                                                                       <  SRR4302543.6941383/94‑1 (MQ=60)
           ATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACT                                                                                       <  SRR4302543.4595407/94‑1 (MQ=60)
            TAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTG                                                                                      >  SRR4302543.4596185/1‑94 (MQ=60)
             AGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGG                                                                                     >  SRR4302543.552813/1‑94 (MQ=60)
             AGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGG                                                                                     >  SRR4302543.3216278/1‑94 (MQ=60)
              GCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGC                                                                                    >  SRR4302543.1481798/1‑94 (MQ=60)
              GCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGC                                                                                    <  SRR4302543.5091596/94‑1 (MQ=60)
               CCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCG                                                                                   <  SRR4302543.705033/94‑1 (MQ=60)
               CCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCG                                                                                   >  SRR4302543.1828302/1‑94 (MQ=60)
               CCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCG                                                                                   >  SRR4302543.1828301/1‑94 (MQ=60)
               CCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCG                                                                                   <  SRR4302543.2725135/94‑1 (MQ=60)
                CGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGG                                                                                  <  SRR4302543.4329635/94‑1 (MQ=60)
                CGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGG                                                                                  <  SRR4302543.1661552/94‑1 (MQ=60)
                CGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGG                                                                                  >  SRR4302543.1380723/1‑94 (MQ=60)
                 GAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGAC                                                                                 >  SRR4302543.3274591/1‑94 (MQ=60)
                  AATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCA                                                                                >  SRR4302543.6559276/1‑94 (MQ=60)
                  AATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCA                                                                                >  SRR4302543.7175573/1‑94 (MQ=60)
                   ATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAA                                                                               >  SRR4302543.4770659/1‑94 (MQ=60)
                    TCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAA                                                                              >  SRR4302543.2146210/1‑94 (MQ=60)
                     CTTCATTACCGGTAATACAGTCATTGATGCACTGTTTTGGGTGCTTGACCAGGGAATCAGCAGCGACAAGCTGCGTTCAGAACTCGCGGCAAAA                                                                             >  SRR4302543.3117224/1‑94 (MQ=57)
                     CTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTTAGAACTGGCGGCAAAT                                                                             >  SRR4302543.6659943/1‑94 (MQ=60)
                     CTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAAT                                                                             >  SRR4302543.4726284/1‑94 (MQ=60)
                     CTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAAT                                                                             <  SRR4302543.1232381/94‑1 (MQ=60)
                     CTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAAT                                                                             <  SRR4302543.4455715/94‑1 (MQ=60)
                     CTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAAT                                                                             >  SRR4302543.2166422/1‑94 (MQ=60)
                     CTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAAT                                                                             <  SRR4302543.225881/94‑1 (MQ=60)
                      TGCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATT                                                                            <  SRR4302543.3376204/94‑1 (MQ=60)
                       TCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTA                                                                           >  SRR4302543.3449966/1‑94 (MQ=60)
                       TCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTA                                                                           <  SRR4302543.1988404/94‑1 (MQ=60)
                        CATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTAC                                                                          <  SRR4302543.4479287/94‑1 (MQ=60)
                        CATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTAC                                                                          >  SRR4302543.5254727/1‑94 (MQ=60)
                         ATTACCGGTAATACAGTCATTGATGCCCTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACC                                                                         <  SRR4302543.4642975/94‑1 (MQ=60)
                         ATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACC                                                                         <  SRR4302543.7760046/94‑1 (MQ=60)
                         ATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACC                                                                         >  SRR4302543.150927/1‑94 (MQ=60)
                         ATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACC                                                                         >  SRR4302543.6550978/1‑94 (MQ=60)
                         ATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACC                                                                         <  SRR4302543.4642976/94‑1 (MQ=60)
                         ATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACC                                                                         <  SRR4302543.7760044/94‑1 (MQ=60)
                          TTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCC                                                                        <  SRR4302543.7549982/94‑1 (MQ=60)
                           TACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCG                                                                       <  SRR4302543.6802651/94‑1 (MQ=60)
                            TCCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGT                                                                      <  SRR4302543.3378228/94‑1 (MQ=60)
                            ACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGT                                                                      >  SRR4302543.2188541/1‑94 (MQ=60)
                             CCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTT                                                                     >  SRR4302543.7598621/1‑94 (MQ=60)
                              CGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTT                                                                    >  SRR4302543.6669342/1‑94 (MQ=60)
                              CGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTT                                                                    <  SRR4302543.4885767/94‑1 (MQ=60)
                              CGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTT                                                                    <  SRR4302543.2985037/94‑1 (MQ=60)
                              CGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTT                                                                    <  SRR4302543.3731602/94‑1 (MQ=60)
                               GGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTA                                                                   <  SRR4302543.1597190/94‑1 (MQ=60)
                               GGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTA                                                                   >  SRR4302543.5523370/1‑94 (MQ=60)
                                GTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTAT                                                                  <  SRR4302543.7359709/94‑1 (MQ=60)
                                GTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTAT                                                                  >  SRR4302543.4551611/1‑94 (MQ=60)
                                GTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTAT                                                                  <  SRR4302543.6068366/94‑1 (MQ=60)
                                GTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTAT                                                                  >  SRR4302543.3861333/1‑94 (MQ=60)
                                 TAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATC                                                                 >  SRR4302543.6680873/1‑94 (MQ=60)
                                 TAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATC                                                                 <  SRR4302543.7883050/94‑1 (MQ=60)
                                  AATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCG                                                                <  SRR4302543.4013417/94‑1 (MQ=60)
                                  AATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCG                                                                <  SRR4302543.6489580/94‑1 (MQ=60)
                                  AATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCG                                                                >  SRR4302543.3398640/1‑94 (MQ=60)
                                   ATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGC                                                               >  SRR4302543.6638566/1‑94 (MQ=60)
                                   ATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGA                                                               >  SRR4302543.7380085/1‑94 (MQ=60)
                                    TACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGAC                                                              <  SRR4302543.2102382/94‑1 (MQ=60)
                                    TACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGAC                                                              <  SRR4302543.2783700/94‑1 (MQ=60)
                                     ACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACC                                                             <  SRR4302543.1200292/94‑1 (MQ=60)
                                      CAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCC                                                            >  SRR4302543.378455/1‑94 (MQ=60)
                                      CAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCC                                                            >  SRR4302543.1177370/1‑94 (MQ=60)
                                      CAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCC                                                            >  SRR4302543.2226538/1‑94 (MQ=60)
                                       AGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCC                                                           <  SRR4302543.7057851/94‑1 (MQ=60)
                                       AGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCC                                                           >  SRR4302543.2185911/1‑94 (MQ=60)
                                       AGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCC                                                           >  SRR4302543.2247056/1‑94 (MQ=60)
                                        GTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGGTGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCG                                                          >  SRR4302543.1396765/1‑94 (MQ=60)
                                        GTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCG                                                          >  SRR4302543.919058/1‑94 (MQ=60)
                                        GTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCG                                                          >  SRR4302543.2841566/1‑94 (MQ=60)
                                        GTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCG                                                          >  SRR4302543.2847415/1‑94 (MQ=60)
                                         TCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGA                                                         <  SRR4302543.6932427/94‑1 (MQ=60)
                                         TCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGA                                                         >  SRR4302543.1423638/1‑94 (MQ=60)
                                           ATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCCAATTACCCGTTTATCGACCCCGATA                                                       >  SRR4302543.7269564/1‑94 (MQ=60)
                                            TTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGGGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAA                                                      <  SRR4302543.5829145/94‑1 (MQ=60)
                                            TTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGAAAA                                                      >  SRR4302543.3708107/1‑94 (MQ=60)
                                             TGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAA                                                     >  SRR4302543.7920924/1‑94 (MQ=60)
                                                TGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAG                                                  <  SRR4302543.5422817/94‑1 (MQ=60)
                                                TGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAG                                                  >  SRR4302543.3493295/1‑94 (MQ=60)
                                                 GCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGA                                                 <  SRR4302543.112516/94‑1 (MQ=60)
                                                  CACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGAT                                                <  SRR4302543.6137195/94‑1 (MQ=60)
                                                   ACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATG                                               >  SRR4302543.2564054/1‑94 (MQ=60)
                                                    CTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGA                                              >  SRR4302543.4446416/1‑94 (MQ=60)
                                                    CTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGA                                              >  SRR4302543.3233381/1‑94 (MQ=60)
                                                    CTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGA                                              <  SRR4302543.4539379/94‑1 (MQ=60)
                                                     TGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGAT                                             <  SRR4302543.2655770/94‑1 (MQ=60)
                                                     TGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGAT                                             >  SRR4302543.6047393/1‑94 (MQ=60)
                                                     TGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGAT                                             >  SRR4302543.6047390/1‑94 (MQ=60)
                                                      GTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATT                                            >  SRR4302543.4824605/1‑94 (MQ=60)
                                                       TTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACTCCGATAAAAAGATGATTC                                           >  SRR4302543.3999930/1‑94 (MQ=60)
                                                       TTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTC                                           >  SRR4302543.6792230/1‑94 (MQ=60)
                                                       TTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTC                                           <  SRR4302543.1578333/94‑1 (MQ=60)
                                                        TATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCT                                          >  SRR4302543.3909735/1‑94 (MQ=60)
                                                         ATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTG                                         <  SRR4302543.1243772/94‑1 (MQ=60)
                                                         ATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTG                                         <  SRR4302543.1100990/94‑1 (MQ=60)
                                                         ATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTG                                         >  SRR4302543.401420/1‑94 (MQ=60)
                                                          TGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGG                                        <  SRR4302543.2180191/94‑1 (MQ=60)
                                                          TGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGG                                        <  SRR4302543.2388454/94‑1 (MQ=60)
                                                           GGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGT                                       <  SRR4302543.7033168/94‑1 (MQ=60)
                                                            GGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTG                                      >  SRR4302543.3405215/1‑94 (MQ=60)
                                                              TGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGAC                                    <  SRR4302543.7658614/94‑1 (MQ=60)
                                                                CGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCG                                  >  SRR4302543.3691739/1‑94 (MQ=60)
                                                                 GTGACCAGGTGATGAGCCGCGACAAGCTGCGTTCAGAACTTGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGG                                 <  SRR4302543.5703265/94‑1 (MQ=60)
                                                                 GTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGG                                 <  SRR4302543.2573986/94‑1 (MQ=60)
                                                                 GTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGG                                 <  SRR4302543.5703266/94‑1 (MQ=60)
                                                                  TGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGT                                <  SRR4302543.3965491/94‑1 (MQ=60)
                                                                   GACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTC                               >  SRR4302543.3163341/1‑94 (MQ=60)
                                                                    ACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCA                              >  SRR4302543.5125227/1‑94 (MQ=60)
                                                                     CCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCAC                             >  SRR4302543.7147792/1‑94 (MQ=60)
                                                                     CCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCAC                             >  SRR4302543.7147793/1‑94 (MQ=60)
                                                                     CCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCAC                             >  SRR4302543.6416551/1‑94 (MQ=60)
                                                                     CCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCAC                             >  SRR4302543.4952552/1‑94 (MQ=60)
                                                                      CAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACA                            <  SRR4302543.1322265/94‑1 (MQ=60)
                                                                      CAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACA                            <  SRR4302543.1800476/94‑1 (MQ=60)
                                                                      CAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACA                            <  SRR4302543.7162220/94‑1 (MQ=60)
                                                                      CAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACA                            <  SRR4302543.226691/94‑1 (MQ=60)
                                                                      CAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACA                            >  SRR4302543.5487412/1‑94 (MQ=60)
                                                                      CAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACA                            >  SRR4302543.2445741/1‑94 (MQ=60)
                                                                      CAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACA                            <  SRR4302543.6295457/94‑1 (MQ=60)
                                                                       AGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAG                           <  SRR4302543.7726116/94‑1 (MQ=60)
                                                                       AGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAG                           >  SRR4302543.382390/1‑94 (MQ=60)
                                                                       AGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAG                           <  SRR4302543.3926633/94‑1 (MQ=60)
                                                                       AGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAG                           >  SRR4302543.4755170/1‑94 (MQ=60)
                                                                       AGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAG                           >  SRR4302543.1920992/1‑94 (MQ=60)
                                                                       AGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAG                           <  SRR4302543.6428959/94‑1 (MQ=60)
                                                                       AGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAG                           >  SRR4302543.5744198/1‑94 (MQ=60)
                                                                       AGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAG                           >  SRR4302543.1920993/1‑94 (MQ=60)
                                                                        GGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGG                          <  SRR4302543.5327256/94‑1 (MQ=60)
                                                                        GGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGG                          <  SRR4302543.3584533/94‑1 (MQ=60)
                                                                         GTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGC                         >  SRR4302543.2601784/1‑94 (MQ=60)
                                                                          TGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCG                        <  SRR4302543.1029465/94‑1 (MQ=60)
                                                                            ATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTG                      >  SRR4302543.7217005/1‑94 (MQ=60)
                                                                             TGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGA                     >  SRR4302543.5429912/1‑94 (MQ=60)
                                                                             TGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGA                     >  SRR4302543.6817841/1‑94 (MQ=60)
                                                                              GAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAG                    <  SRR4302543.7017837/94‑1 (MQ=60)
                                                                               AGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGA                   >  SRR4302543.7643764/1‑94 (MQ=60)
                                                                                GCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAG                  <  SRR4302543.1785256/94‑1 (MQ=60)
                                                                                 CAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGT                 >  SRR4302543.2225010/1‑94 (MQ=60)
                                                                                  AGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTT                >  SRR4302543.6434041/1‑94 (MQ=60)
                                                                                  AGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTT                >  SRR4302543.7949450/1‑94 (MQ=60)
                                                                                  AGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTT                >  SRR4302543.1752211/1‑94 (MQ=60)
                                                                                  AGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGGT                >  SRR4302543.3148718/1‑94 (MQ=60)
                                                                                    CGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTC              <  SRR4302543.1915295/94‑1 (MQ=60)
                                                                                    CGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTC              >  SRR4302543.2350598/1‑94 (MQ=60)
                                                                                    CGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTC              <  SRR4302543.2510873/94‑1 (MQ=60)
                                                                                     GACAAGCTGCGTTCAGAACTGGCGGCAAATTCCCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCG             <  SRR4302543.7206029/94‑1 (MQ=60)
                                                                                     GACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCG             <  SRR4302543.1252011/94‑1 (MQ=60)
                                                                                     GACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCG             >  SRR4302543.2375958/1‑94 (MQ=60)
                                                                                      ACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGG            >  SRR4302543.2894433/1‑94 (MQ=60)
                                                                                      ACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGG            <  SRR4302543.6415554/94‑1 (MQ=60)
                                                                                       CAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGT           <  SRR4302543.3976719/94‑1 (MQ=60)
                                                                                       CAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGT           <  SRR4302543.3976720/94‑1 (MQ=60)
                                                                                       CAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGT           <  SRR4302543.6910794/94‑1 (MQ=60)
                                                                                         AGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCG         >  SRR4302543.6509934/1‑94 (MQ=60)
                                                                                         AGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCG         >  SRR4302543.17221/1‑94 (MQ=60)
                                                                                         AGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCG         <  SRR4302543.4775944/94‑1 (MQ=60)
                                                                                         AGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCG         >  SRR4302543.4874176/1‑94 (MQ=60)
                                                                                         AGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCG         <  SRR4302543.5169207/94‑1 (MQ=60)
                                                                                             T‑‑‑TCAGACCTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTT  <  SRR4302543.4675085/94‑1 (MQ=60)
                                                                                             |                                                                                                
AAACGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTG‑‑‑TCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTT  >  NC_000913/3968224‑3968410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: