Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,979,546 Δ1 bp coding (1047/1386 nt) yifK → putative amino acid/amine transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,979,5450G.99.5% 1693.7 / ‑1.2 375coding (1046/1386 nt)yifKputative amino acid/amine transport protein
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base . (197/176);  total (198/177)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 388 total aligned reads displayed.

TTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATT‑GCTCATGCCTGGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATA  >  NC_000913/3979454‑3979633
                                                                                            |                                                                                        
ttACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTg                                                                                          <  2:5021345/93‑1 (MQ=255)
   ccGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTgaac                                                                                       >  1:1957178/1‑90 (MQ=255)
   ccGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTgaac                                                                                       <  1:4109581/93‑4 (MQ=255)
      gcggcAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTAc                                                                                   <  2:3047164/93‑1 (MQ=255)
      gcggcAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTAc                                                                                   <  2:2029520/93‑1 (MQ=255)
      gcggcAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTAc                                                                                   <  1:6002405/93‑1 (MQ=255)
       cggcAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTAca                                                                                  <  1:5086680/93‑1 (MQ=255)
         gcAATGGCGAAAGTTTACCGTCACGGCGTACCGGTTGCGGGGGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTAcatg                                                                                >  2:7883954/1‑92 (MQ=255)
          cAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTAcatca                                                                               <  2:1877183/93‑1 (MQ=255)
           aaTGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTAcatcat                                                                              >  1:1384044/1‑93 (MQ=255)
            aTGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCAtt                                                                             >  1:4365591/1‑93 (MQ=255)
             tGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTc                                                                            >  1:1103283/1‑93 (MQ=255)
             tGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTAAATCATTc                                                                            >  1:7657390/1‑93 (MQ=255)
              ggCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTcc                                                                           <  2:267740/93‑1 (MQ=255)
               gCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGG‑ACTACATCATTccc                                                                          <  2:5324901/93‑1 (MQ=255)
                cGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCa                                                                         <  2:3177900/93‑1 (MQ=255)
                cGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCa                                                                         >  1:497034/1‑93 (MQ=255)
                 gAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCaa                                                                        >  2:2927730/1‑93 (MQ=255)
                   aaGTTTCCCGTCCCGGCGTACCGGTTGCGGTTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATc                                                                      <  1:6551062/93‑1 (MQ=255)
                   aaGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATc                                                                      <  1:7800564/93‑1 (MQ=255)
                        tCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAg                                                                 >  1:2729941/1‑93 (MQ=255)
                         cccGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGc                                                                >  1:3904847/1‑93 (MQ=255)
                         cccGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGc                                                                <  1:6915643/93‑1 (MQ=255)
                            gTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCgtg                                                             >  1:6781278/1‑93 (MQ=255)
                             tCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCgtgt                                                            <  1:7908483/93‑1 (MQ=255)
                                cGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGtt                                                         <  2:6547937/93‑1 (MQ=255)
                                cGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGtt                                                         <  2:5252171/93‑1 (MQ=255)
                                cGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCGCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGtt                                                         <  2:2767610/93‑1 (MQ=255)
                                 ggCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGttt                                                        <  1:4670768/93‑1 (MQ=255)
                                 ggCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGttt                                                        <  2:4156767/93‑1 (MQ=255)
                                 ggCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGttt                                                        >  1:5689852/1‑93 (MQ=255)
                                 ggCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGttt                                                        <  1:6995229/93‑1 (MQ=255)
                                     tACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtct                                                    >  1:3701418/1‑93 (MQ=255)
                                     tACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtct                                                    >  1:4458836/1‑93 (MQ=255)
                                     tACCGGTTGCGGGTGTGGCAGTATATATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtct                                                    <  1:4900827/93‑1 (MQ=255)
                                       ccGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtctac                                                  >  2:4984838/1‑93 (MQ=255)
                                        cGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtctacg                                                 >  2:2146006/1‑93 (MQ=255)
                                             gCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtctacgtctac                                            <  1:4484779/93‑1 (MQ=255)
                                              cGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACa                                           <  2:544719/93‑1 (MQ=255)
                                               gggTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAg                                          >  1:2416836/1‑93 (MQ=255)
                                               gggTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAg                                          >  1:6101463/1‑93 (MQ=255)
                                                ggTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGt                                         <  2:2289088/93‑1 (MQ=255)
                                                 gtgtGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTg                                        >  1:5973567/1‑93 (MQ=255)
                                                   gtgGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGcc                                      <  2:7745265/93‑1 (MQ=255)
                                                   gtgGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGcc                                      >  1:1866991/1‑93 (MQ=255)
                                                     ggCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAg                                    <  2:5968299/93‑1 (MQ=255)
                                                       cAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCg                                  >  1:4742758/1‑93 (MQ=255)
                                                         gTATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTg                                >  1:6609398/1‑93 (MQ=255)
                                                         gTATCTACTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTg                                >  1:5481287/1‑93 (MQ=255)
                                                          tATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGc                               >  2:3384371/1‑93 (MQ=255)
                                                          tATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGc                               >  2:3636382/1‑93 (MQ=255)
                                                          tATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGc                               >  2:1793500/1‑93 (MQ=255)
                                                          tATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGc                               >  2:1294798/1‑93 (MQ=255)
                                                          tATCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGc                               >  2:4613912/1‑93 (MQ=255)
                                                            tCTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCtt                             >  2:1619131/1‑93 (MQ=255)
                                                             cTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTc                            <  1:7712911/93‑1 (MQ=255)
                                                             cTATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTc                            <  2:7527712/93‑1 (MQ=255)
                                                              tATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTcc                           >  2:3526688/1‑93 (MQ=255)
                                                              tATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTcc                           <  1:4603593/93‑1 (MQ=255)
                                                              tATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTcc                           <  1:1160981/93‑1 (MQ=255)
                                                              tATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTcc                           >  1:1726717/1‑93 (MQ=255)
                                                              tATTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTcc                           <  2:408968/93‑1 (MQ=255)
                                                               aTTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCg                          >  1:1092441/1‑93 (MQ=255)
                                                               aTTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCg                          <  1:6171348/93‑1 (MQ=255)
                                                               aTTGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCg                          >  2:4376444/1‑93 (MQ=255)
                                                                ttGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCgg                         <  1:6908090/93‑1 (MQ=255)
                                                                 tGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCggg                        <  2:104048/93‑1 (MQ=255)
                                                                 tGCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCggg                        <  1:2293991/93‑1 (MQ=255)
                                                                  gCTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCgggg                       >  1:360003/1‑93 (MQ=255)
                                                                   cTATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGa                      <  1:7400696/93‑1 (MQ=255)
                                                                    tATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAt                     >  2:3910396/1‑93 (MQ=255)
                                                                    tATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAt                     >  2:5566544/1‑93 (MQ=255)
                                                                    tATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAt                     >  1:124350/1‑93 (MQ=255)
                                                                    tATTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAt                     <  1:4328733/93‑1 (MQ=255)
                                                                     aTTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATg                    >  2:2605789/1‑93 (MQ=255)
                                                                     aTTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATg                    <  1:5737898/93‑1 (MQ=255)
                                                                     aTTCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGGGCCAGCGTGCTTCCGGGGATg                    >  1:1579022/1‑93 (MQ=255)
                                                                      ttCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATgg                   <  2:7366872/93‑1 (MQ=255)
                                                                       tCTGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGt                  <  1:3281760/93‑1 (MQ=255)
                                                                         tGCTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGc                >  2:6862387/1‑93 (MQ=255)
                                                                           cTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCa              >  2:697666/1‑93 (MQ=255)
                                                                           cTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCa              <  2:1462047/93‑1 (MQ=255)
                                                                           cTAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCa              <  2:6401711/93‑1 (MQ=255)
                                                                            tAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAt             >  1:2524250/1‑93 (MQ=255)
                                                                            tAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAt             <  1:2056175/93‑1 (MQ=255)
                                                                            tAATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGGGCCAt             >  1:1536218/1‑93 (MQ=255)
                                                                              attggCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATgg           >  1:6383001/5‑93 (MQ=255)
                                                                                  gCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTtg       <  2:1156619/93‑1 (MQ=255)
                                                                                   cTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTtgt      <  1:892334/93‑1 (MQ=255)
                                                                                    tCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTtgtg     <  2:4551534/93‑1 (MQ=255)
                                                                                    tCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTtgtg     >  1:7155167/1‑93 (MQ=255)
                                                                                     cATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGa    >  2:5785280/1‑93 (MQ=255)
                                                                                     cATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGa    >  1:5841399/1‑93 (MQ=255)
                                                                                     cATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGa    <  1:2830779/93‑1 (MQ=255)
                                                                                      aTGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGat   >  2:6327825/1‑93 (MQ=255)
                                                                                      aTGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGat   >  2:7242119/1‑93 (MQ=255)
                                                                                       tGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCCGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGata  >  1:4237182/1‑93 (MQ=255)
                                                                                       tGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGata  >  2:2437224/1‑93 (MQ=255)
                                                                                       tGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGata  <  2:6625200/93‑1 (MQ=255)
                                                                                       tGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGata  <  1:3497307/93‑1 (MQ=255)
                                                                                            |                                                                                        
TTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATT‑GCTCATGCCTGGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATA  >  NC_000913/3979454‑3979633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 236 total aligned reads displayed.
TTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATT‑GCTCATGCCTGGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTGAT  >  NC_000913/3979454‑3979638
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TTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCTGA                                                                                              <  SRR4302543.2290702/94‑1 (MQ=60)
  ACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAAC                                                                                           >  SRR4302543.1974733/1‑94 (MQ=60)
  ACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAAC                                                                                           >  SRR4302543.6978384/1‑94 (MQ=60)
   CCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACT                                                                                          <  SRR4302543.6987428/94‑1 (MQ=60)
      GCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACA                                                                                       <  SRR4302543.6057591/94‑1 (MQ=60)
      GCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACA                                                                                       <  SRR4302543.4677536/94‑1 (MQ=60)
       CGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACAT                                                                                      <  SRR4302543.5132792/94‑1 (MQ=60)
        GGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATC                                                                                     <  SRR4302543.2200054/94‑1 (MQ=60)
         GCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCA                                                                                    >  SRR4302543.2121023/1‑94 (MQ=60)
         GCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCA                                                                                    <  SRR4302543.2073421/94‑1 (MQ=60)
          CAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCAT                                                                                   >  SRR4302543.4698396/1‑94 (MQ=60)
          CAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCAT                                                                                   >  SRR4302543.1396498/1‑94 (MQ=60)
          CAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCAT                                                                                   >  SRR4302543.360473/1‑94 (MQ=60)
           AATGGCGAAAGTTTCCCGCCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATT                                                                                  >  SRR4302543.1117647/1‑94 (MQ=60)
            ATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTC                                                                                 >  SRR4302543.1113230/1‑94 (MQ=60)
            ATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTC                                                                                 <  SRR4302543.416810/94‑1 (MQ=60)
            ATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTC                                                                                 <  SRR4302543.4866949/94‑1 (MQ=60)
            ATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTC                                                                                 >  SRR4302543.1113229/1‑94 (MQ=60)
            ATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTAAATCATTC                                                                                 >  SRR4302543.7729981/1‑94 (MQ=60)
             TGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCC                                                                                <  SRR4302543.124033/94‑1 (MQ=60)
              GGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTGTCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCC                                                                               >  SRR4302543.42735/1‑94 (MQ=60)
              GGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCC                                                                               <  SRR4302543.7131781/94‑1 (MQ=60)
               GCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCA                                                                              >  SRR4302543.6462288/1‑94 (MQ=60)
               GCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCA                                                                              >  SRR4302543.501629/1‑94 (MQ=60)
                  AAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATC                                                                           <  SRR4302543.1555732/94‑1 (MQ=60)
                   AAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCC                                                                          <  SRR4302543.7874084/94‑1 (MQ=60)
                   AAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCC                                                                          <  SRR4302543.4289032/94‑1 (MQ=60)
                   AAGTGTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCC                                                                          <  SRR4302543.3933228/94‑1 (MQ=60)
                     GTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGC                                                                        >  SRR4302543.836502/1‑94 (MQ=60)
                       TTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAG                                                                      <  SRR4302543.4610026/94‑1 (MQ=60)
                       TTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAG                                                                      <  SRR4302543.5775956/94‑1 (MQ=60)
                       TTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAG                                                                      >  SRR4302543.2754787/1‑94 (MQ=60)
                        TCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGC                                                                     >  SRR4302543.3939319/1‑94 (MQ=60)
                        TCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGC                                                                     <  SRR4302543.2334320/94‑1 (MQ=60)
                        TCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGC                                                                     <  SRR4302543.5664267/94‑1 (MQ=60)
                         CCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCG                                                                    >  SRR4302543.5853657/1‑94 (MQ=60)
                         CCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCG                                                                    <  SRR4302543.6980649/94‑1 (MQ=60)
                           CGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTG                                                                  >  SRR4302543.6845315/1‑94 (MQ=60)
                           CGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTG                                                                  <  SRR4302543.6436996/94‑1 (MQ=60)
                           CGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTG                                                                  >  SRR4302543.3588363/1‑94 (MQ=60)
                           CGTCACGGCGTACCGGTTGCGGGGGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTG                                                                  >  SRR4302543.6842431/1‑94 (MQ=60)
                            GTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGT                                                                 >  SRR4302543.6108514/1‑94 (MQ=60)
                            GTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGT                                                                 >  SRR4302543.2016430/1‑94 (MQ=60)
                             TCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTG                                                                <  SRR4302543.596625/94‑1 (MQ=60)
                             TCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTG                                                                <  SRR4302543.1553107/94‑1 (MQ=60)
                             TCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTG                                                                <  SRR4302543.7982791/94‑1 (MQ=60)
                              CACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGT                                                               <  SRR4302543.1976414/94‑1 (MQ=60)
                              CACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGT                                                               >  SRR4302543.613100/1‑94 (MQ=60)
                                 GGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTG                                                            <  SRR4302543.6306175/94‑1 (MQ=60)
                                 GGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTG                                                            >  SRR4302543.7187225/1‑94 (MQ=60)
                                 GGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTG                                                            <  SRR4302543.4713343/94‑1 (MQ=60)
                                 GGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTG                                                            <  SRR4302543.615529/94‑1 (MQ=60)
                                 GGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTG                                                            <  SRR4302543.7061201/94‑1 (MQ=60)
                                   CGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCACATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTC                                                          <  SRR4302543.1758326/94‑1 (MQ=60)
                                    GTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCT                                                         >  SRR4302543.3733956/1‑94 (MQ=60)
                                    GTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCT                                                         >  SRR4302543.4499238/1‑94 (MQ=60)
                                    GTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCT                                                         >  SRR4302543.4946038/1‑94 (MQ=60)
                                    GTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCT                                                         >  SRR4302543.6540234/1‑94 (MQ=60)
                                    GTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCT                                                         <  SRR4302543.1003958/94‑1 (MQ=60)
                                     TACCGGTTGCGGGTGTGGCAGTATATATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTA                                                        <  SRR4302543.4945501/94‑1 (MQ=60)
                                      ACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTAC                                                       >  SRR4302543.6624364/1‑94 (MQ=60)
                                      ACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTAC                                                       >  SRR4302543.6334008/1‑94 (MQ=60)
                                      ACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTAC                                                       <  SRR4302543.2698693/94‑1 (MQ=60)
                                      ACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTAC                                                       <  SRR4302543.2500364/94‑1 (MQ=60)
                                      ACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTAC                                                       >  SRR4302543.4391585/1‑94 (MQ=60)
                                      ACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATCCCCAATCCGCAGCGTGTGTTTGTCTAC                                                       <  SRR4302543.5011419/94‑1 (MQ=60)
                                       CCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACG                                                      <  SRR4302543.4381014/94‑1 (MQ=60)
                                         GGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTC                                                    >  SRR4302543.6980205/1‑94 (MQ=60)
                                         GGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTC                                                    >  SRR4302543.474107/1‑94 (MQ=60)
                                              CGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAG                                               >  SRR4302543.6159270/1‑94 (MQ=60)
                                              CGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAG                                               <  SRR4302543.5095628/94‑1 (MQ=60)
                                              CGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAG                                               <  SRR4302543.6971289/94‑1 (MQ=60)
                                              CGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAG                                               <  SRR4302543.2893734/94‑1 (MQ=60)
                                              CGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAG                                               >  SRR4302543.2438665/1‑94 (MQ=60)
                                              CGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAG                                               <  SRR4302543.1108029/94‑1 (MQ=60)
                                               GGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGT                                              <  SRR4302543.5204975/94‑1 (MQ=60)
                                               GGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGT                                              <  SRR4302543.4843196/94‑1 (MQ=60)
                                                GGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTG                                             >  SRR4302543.6028283/1‑94 (MQ=60)
                                                GGTGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTG                                             >  SRR4302543.6998144/1‑94 (MQ=60)
                                                GGTGTGGCAGTATCTATAGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTG                                             <  SRR4302543.4416502/94‑1 (MQ=60)
                                                  TGTGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCC                                           >  SRR4302543.1883764/1‑94 (MQ=60)
                                                  TGTGGCAGTATCTATAGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTGCCAATCCGCAGCGTGTGTTTGTATACGTCTACAGTGCC                                           >  SRR4302543.1883763/1‑94 (MQ=60)
                                                    TGGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAG                                         <  SRR4302543.2762455/94‑1 (MQ=60)
                                                     GGCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCGACGTCTACAGTGCCAGC                                        >  SRR4302543.7110671/1‑94 (MQ=60)
                                                      GCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCG                                       <  SRR4302543.4100928/94‑1 (MQ=60)
                                                      GCAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCG                                       >  SRR4302543.4786094/1‑94 (MQ=60)
                                                       CAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGT                                      <  SRR4302543.5944679/94‑1 (MQ=60)
                                                       CAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGT                                      >  SRR4302543.3510301/1‑94 (MQ=60)
                                                       CAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGT                                      <  SRR4302543.3110145/94‑1 (MQ=60)
                                                       CAGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGT                                      >  SRR4302543.6927959/1‑94 (MQ=60)
                                                        AGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTG                                     >  SRR4302543.5054072/1‑94 (MQ=60)
                                                        AGTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTG                                     >  SRR4302543.6671690/1‑94 (MQ=60)
                                                        AGTATCTACTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTG                                     >  SRR4302543.5530967/1‑94 (MQ=60)
                                                         GTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGC                                    >  SRR4302543.5647945/1‑94 (MQ=60)
                                                         GTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGC                                    >  SRR4302543.375220/1‑94 (MQ=60)
                                                         GTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGC                                    >  SRR4302543.142149/1‑94 (MQ=60)
                                                         GTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGC                                    >  SRR4302543.4373837/1‑94 (MQ=60)
                                                         GTATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGC                                    >  SRR4302543.684824/1‑94 (MQ=60)
                                                           ATCTATTGCTATTCTGCT‑AATTGGCTCATGCCTGCAA‑TACATCATTCCCAATCCGCCGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTT                                  >  SRR4302543.4070427/1‑94 (MQ=60)
                                                           ATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTT                                  >  SRR4302543.6197753/1‑94 (MQ=60)
                                                           ATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTT                                  <  SRR4302543.1651035/94‑1 (MQ=60)
                                                           ATCTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTT                                  >  SRR4302543.4743945/1‑94 (MQ=60)
                                                             CTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCC                                >  SRR4302543.1742109/1‑94 (MQ=60)
                                                             CTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCC                                <  SRR4302543.1117851/94‑1 (MQ=60)
                                                             CTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCC                                <  SRR4302543.7785863/94‑1 (MQ=60)
                                                             CTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCC                                <  SRR4302543.1613192/94‑1 (MQ=60)
                                                             CTATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCC                                >  SRR4302543.4641752/1‑94 (MQ=60)
                                                              TATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCG                               >  SRR4302543.1102264/1‑94 (MQ=60)
                                                              TATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCG                               <  SRR4302543.1171555/94‑1 (MQ=60)
                                                              TATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCG                               >  SRR4302543.1220078/1‑94 (MQ=60)
                                                              TATTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCG                               <  SRR4302543.467398/94‑1 (MQ=60)
                                                               ATTGCTATTCTGCTAAATG‑GCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGCGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGG                              <  SRR4302543.4324173/94‑1 (MQ=60)
                                                                TTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGG                             >  SRR4302543.7771243/1‑94 (MQ=60)
                                                                TTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGG                             >  SRR4302543.7771416/1‑94 (MQ=60)
                                                                TTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGG                             <  SRR4302543.4582106/94‑1 (MQ=60)
                                                                TTGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGG                             <  SRR4302543.6973013/94‑1 (MQ=60)
                                                                 TGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGG                            >  SRR4302543.363330/1‑94 (MQ=60)
                                                                 TGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGG                            >  SRR4302543.307809/1‑94 (MQ=60)
                                                                 TGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGG                            <  SRR4302543.2314917/94‑1 (MQ=60)
                                                                 TGCTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTAAGTCTACAGTGCCAGCGTGCTTCCGGGG                            <  SRR4302543.7917538/94‑1 (MQ=60)
                                                                   CTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAT                          <  SRR4302543.7471743/94‑1 (MQ=60)
                                                                   CTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAT                          >  SRR4302543.1006176/1‑94 (MQ=60)
                                                                   CTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAT                          <  SRR4302543.5769413/94‑1 (MQ=60)
                                                                   CTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAT                          >  SRR4302543.6051324/1‑94 (MQ=60)
                                                                   CTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAT                          <  SRR4302543.4858723/94‑1 (MQ=60)
                                                                   CTATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAT                          >  SRR4302543.125474/1‑94 (MQ=60)
                                                                    TATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATG                         >  SRR4302543.7681674/1‑94 (MQ=60)
                                                                    TATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATG                         <  SRR4302543.4368016/94‑1 (MQ=60)
                                                                    TATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATG                         >  SRR4302543.1322008/1‑94 (MQ=60)
                                                                    TATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATG                         >  SRR4302543.6800041/1‑94 (MQ=60)
                                                                    TATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGGGCCAGCGTGCTTCCGGGGATG                         >  SRR4302543.1593116/1‑94 (MQ=60)
                                                                     ATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGG                        >  SRR4302543.1505090/1‑94 (MQ=60)
                                                                     ATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGG                        <  SRR4302543.5790223/94‑1 (MQ=60)
                                                                     ATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGG                        >  SRR4302543.2661828/1‑94 (MQ=60)
                                                                     ATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGG                        >  SRR4302543.3644006/1‑94 (MQ=60)
                                                                     ATTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGG                        >  SRR4302543.3720818/1‑94 (MQ=60)
                                                                      TTCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGT                       <  SRR4302543.6671104/94‑1 (MQ=60)
                                                                       TCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTG                      <  SRR4302543.7928747/94‑1 (MQ=60)
                                                                       TCTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTG                      <  SRR4302543.3311386/94‑1 (MQ=60)
                                                                        CTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGC                     >  SRR4302543.367548/1‑94 (MQ=60)
                                                                        CTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGC                     <  SRR4302543.745615/94‑1 (MQ=60)
                                                                        CTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGC                     >  SRR4302543.6178561/1‑94 (MQ=60)
                                                                        CTGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGC                     >  SRR4302543.6178560/1‑94 (MQ=60)
                                                                         TGCT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCC                    >  SRR4302543.4041468/1‑94 (MQ=60)
                                                                           CT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAT                  >  SRR4302543.7588657/1‑94 (MQ=60)
                                                                           CT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAT                  >  SRR4302543.2547202/1‑94 (MQ=60)
                                                                           CT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAT                  >  SRR4302543.244272/1‑94 (MQ=60)
                                                                           CT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAT                  >  SRR4302543.441511/1‑94 (MQ=60)
                                                                           CT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAT                  >  SRR4302543.4498671/1‑94 (MQ=60)
                                                                           CT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAT                  >  SRR4302543.7986369/1‑94 (MQ=60)
                                                                           CT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAT                  >  SRR4302543.5307074/1‑94 (MQ=60)
                                                                           CT‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGGGCCAT                  >  SRR4302543.1549972/1‑94 (MQ=60)
                                                                            T‑AATTGGCTCATGCCT‑GAGCTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATG                 >  SRR4302543.4611589/1‑94 (MQ=60)
                                                                            T‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATG                 >  SRR4302543.5618996/1‑94 (MQ=60)
                                                                            T‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATG                 >  SRR4302543.4594320/1‑94 (MQ=60)
                                                                            T‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATG                 <  SRR4302543.2074578/94‑1 (MQ=60)
                                                                            T‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATG                 <  SRR4302543.5374466/94‑1 (MQ=60)
                                                                            T‑AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATG                 >  SRR4302543.4983171/1‑94 (MQ=60)
                                                                              AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGG                >  SRR4302543.737588/1‑94 (MQ=60)
                                                                              AATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGG                >  SRR4302543.6443072/1‑94 (MQ=60)
                                                                               ATTGGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGT               >  SRR4302543.7989660/1‑94 (MQ=60)
                                                                                ttgGCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTT              >  SRR4302543.7394206/4‑94 (MQ=60)
                                                                                TG‑GCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTT             >  SRR4302543.1545645/1‑94 (MQ=60)
                                                                                TG‑GCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTT             <  SRR4302543.1297474/94‑1 (MQ=60)
                                                                                 G‑GCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTG            <  SRR4302543.7815805/94‑1 (MQ=60)
                                                                                 G‑GCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTG            <  SRR4302543.6056012/94‑1 (MQ=60)
                                                                                   GCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGT           <  SRR4302543.1781425/94‑1 (MQ=60)
                                                                                   GCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGT           <  SRR4302543.1921664/94‑1 (MQ=60)
                                                                                   GCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGT           <  SRR4302543.276166/94‑1 (MQ=60)
                                                                                    CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTG          <  SRR4302543.900218/94‑1 (MQ=60)
                                                                                    CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTG          >  SRR4302543.5756867/1‑94 (MQ=60)
                                                                                    CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTG          <  SRR4302543.4517885/94‑1 (MQ=60)
                                                                                    CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTG          >  SRR4302543.6664751/1‑94 (MQ=60)
                                                                                    CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTG          <  SRR4302543.4517884/94‑1 (MQ=60)
                                                                                     TCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGA         >  SRR4302543.5894541/1‑94 (MQ=60)
                                                                                      CATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGAT        <  SRR4302543.2856676/94‑1 (MQ=60)
                                                                                      CATGCCT‑GAACTACATCACTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGAT        <  SRR4302543.5963023/94‑1 (MQ=60)
                                                                                       ATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCCGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATA       >  SRR4302543.4275621/1‑94 (MQ=60)
                                                                                       ATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATA       >  SRR4302543.2375513/1‑94 (MQ=60)
                                                                                       ATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATA       <  SRR4302543.584889/94‑1 (MQ=60)
                                                                                       ATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATA       >  SRR4302543.7892549/1‑94 (MQ=60)
                                                                                       ATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATA       >  SRR4302543.4275620/1‑94 (MQ=60)
                                                                                       ATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATA       >  SRR4302543.2468046/1‑94 (MQ=60)
                                                                                        TGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATAT      <  SRR4302543.3528593/94‑1 (MQ=60)
                                                                                         GCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATT     <  SRR4302543.1342911/94‑1 (MQ=60)
                                                                                          CCT‑GAACTACATCCTTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTG    >  SRR4302543.4220481/1‑94 (MQ=60)
                                                                                          CCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTG    >  SRR4302543.5458805/1‑94 (MQ=60)
                                                                                          CCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTG    >  SRR4302543.2661085/1‑94 (MQ=60)
                                                                                          CCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTG    <  SRR4302543.7381175/94‑1 (MQ=60)
                                                                                            ctGAACTAGATCATCCCCAACCGGCAGCGTGTGTTTGTCTGCGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTGA   <  SRR4302543.1106255/92‑1 (MQ=60)
                                                                                            ctGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTGA   >  SRR4302543.3139984/3‑94 (MQ=60)
                                                                                            ctGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTGA   >  SRR4302543.2980696/3‑94 (MQ=60)
                                                                                            ctGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTGA   <  SRR4302543.5030212/92‑1 (MQ=60)
                                                                                            ctGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTGA   <  SRR4302543.1106256/92‑1 (MQ=60)
                                                                                            ctGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTGA   >  SRR4302543.6162889/3‑94 (MQ=60)
                                                                                             TGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTGAT  <  SRR4302543.162861/94‑1 (MQ=60)
                                                                                             TGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTGAT  >  SRR4302543.7108411/1‑94 (MQ=60)
                                                                                             TGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTGAT  <  SRR4302543.7935067/94‑1 (MQ=60)
                                                                                             TGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTGAT  <  SRR4302543.6661324/94‑1 (MQ=60)
                                                                                             TGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTGAT  <  SRR4302543.5365851/94‑1 (MQ=60)
                                                                                              |                                                                                            
TTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCT‑AATT‑GCTCATGCCTGGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTGAT  >  NC_000913/3979454‑3979638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑