Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,987,807	A→G	I198I (ATT→ATC)	hemC ←	porphobilinogen deaminase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,987,807	0	A	G	100.0%	1259.0 / NA	393	I198I (ATT→ATC)	hemC	porphobilinogen deaminase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (203/190); total (203/190)

Only 100 of 418 total aligned reads displayed.

GTGATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCC  >  NC_000913/3987717‑3987896

gtgATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGAt                                                                                         <  1:3170540/93‑1 (MQ=255)

 tgATTCAGCGCGTCAAGCAGCTCGCGAGTGTGTGAATCATCAAGGCGTCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGAtc                                                                                        <  1:4862273/93‑1 (MQ=255)

  gATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGAtct                                                                                       <  2:456495/93‑1 (MQ=255)

   aTTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGAtctc                                                                                      <  2:6219252/93‑1 (MQ=255)

   aTTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGAtctc                                                                                      <  1:952866/93‑1 (MQ=255)

    ttCAGCGCGGCAAGCAGCTCGCGAGTGCGTTAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCg                                                                                     <  1:5514055/93‑1 (MQ=255)

    ttCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCg                                                                                     <  1:4556733/93‑1 (MQ=255)

     tCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCgg                                                                                    <  1:1657648/93‑1 (MQ=255)

       aGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGt                                                                                  <  1:6819132/93‑1 (MQ=255)

       aGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGt                                                                                  >  2:3312942/1‑93 (MQ=255)

         cgcgGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTgg                                                                                <  2:828868/93‑1 (MQ=255)

          gcgGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGc                                                                               >  1:6342479/1‑93 (MQ=255)

             gCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCaac                                                                            <  2:2762543/93‑2 (MQ=255)

                agcagcTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCaacgcg                                                                         >  1:7203184/1‑89 (MQ=255)

                   agcTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACgcggcg                                                                      >  1:5650593/1‑93 (MQ=255)

                   agcTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACgcggcg                                                                      >  1:7592102/1‑93 (MQ=255)

                   agcTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACgcggcg                                                                      >  1:1487119/1‑93 (MQ=255)

                     cTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGcgcg                                                                    <  2:5660720/93‑1 (MQ=255)

                      tCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGa                                                                   <  1:2904600/93‑1 (MQ=255)

                       cgcgAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGaa                                                                  <  2:4864375/93‑1 (MQ=255)

                       cgcgAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGaa                                                                  >  1:6927059/1‑93 (MQ=255)

                        gcgAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGTGTGGCAACTCGGCGCGagt                                                                 >  2:5076649/1‑91 (MQ=255)

                         cgcgTGCGTGAATCATCAAGGCAGCATTCACTGCCCCCCGCCCCTTGTCCTTCCGCCGGAAGAGAGATCTCGCGTGGCAACGCGGCGCGAAtc                                                                <  2:6835267/90‑2 (MQ=255)

                         cgAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATa                                                                <  1:30064/93‑1 (MQ=255)

                           aGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACg                                                              >  1:3347260/1‑93 (MQ=255)

                              gCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGa                                                           <  1:3886613/93‑1 (MQ=255)

                               cGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGAc                                                          <  1:5832912/93‑1 (MQ=255)

                               cGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGAc                                                          <  2:4314590/93‑1 (MQ=255)

                                 tGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTc                                                        <  1:6540343/93‑1 (MQ=255)

                                  gAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTcc                                                       <  2:1444019/93‑1 (MQ=255)

                                   aaTCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGCGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCa                                                      <  1:619217/93‑1 (MQ=255)

                                    atcatcAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAg                                                     >  1:3580122/1‑93 (MQ=255)

                                    atcatcAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAg                                                     >  1:242493/1‑93 (MQ=255)

                                     tcatcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGa                                                    >  2:3969569/1‑93 (MQ=255)

                                       ctcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGAcc                                                  >  1:3751737/2‑93 (MQ=255)

                                        tcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCt                                                 >  2:5301510/1‑93 (MQ=255)

                                        tcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCt                                                 <  1:1233878/93‑1 (MQ=255)

                                        tcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCt                                                 <  1:1014727/93‑1 (MQ=255)

                                        tcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCt                                                 >  1:2964183/1‑93 (MQ=255)

                                             gcggcATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACg                                            <  2:3367003/93‑1 (MQ=255)

                                              cggcATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGt                                           <  2:2676583/93‑1 (MQ=255)

                                               ggcATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGtt                                          <  2:7182801/93‑1 (MQ=255)

                                               ggcATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGtt                                          <  2:6636110/93‑1 (MQ=255)

                                               ggcATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGtt                                          >  2:6028343/1‑93 (MQ=255)

                                               ggcATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGtt                                          >  2:3863998/1‑93 (MQ=255)

                                                  aTTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTa                                       <  2:1688192/93‑1 (MQ=255)

                                                   ttCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAg                                      >  1:2239873/1‑93 (MQ=255)

                                                   ttCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAg                                      >  2:4479438/1‑93 (MQ=255)

                                                   ttCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAg                                      >  1:1772362/1‑93 (MQ=255)

                                                   ttCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGGTTTAg                                      >  2:4662943/1‑93 (MQ=255)

                                                    tCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGt                                     <  1:914034/93‑1 (MQ=255)

                                                     cAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTTGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTc                                    <  2:4804457/93‑1 (MQ=255)

                                                     cAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTc                                    >  2:3223250/1‑93 (MQ=255)

                                                     cAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTc                                    <  1:2763690/93‑1 (MQ=255)

                                                     cAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTc                                    <  2:689526/93‑1 (MQ=255)

                                                     cAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTc                                    <  2:1310590/93‑1 (MQ=255)

                                                     cAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTc                                    >  1:4367620/1‑93 (MQ=255)

                                                      aaTACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTcc                                   <  1:154955/93‑1 (MQ=255)

                                                       aTACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCg                                  >  2:1061126/1‑93 (MQ=255)

                                                       aTACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCg                                  >  2:2097432/1‑93 (MQ=255)

                                                        tACCCACCGCACCTTGTCCTACCACCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCgg                                 >  2:1844802/1‑93 (MQ=255)

                                                         aCCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGc                                <  1:4141951/93‑1 (MQ=255)

                                                         aCCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGc                                <  1:26783/93‑1 (MQ=255)

                                                         aCCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGc                                <  1:405317/93‑1 (MQ=255)

                                                          cccACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCt                               >  1:4645821/1‑93 (MQ=255)

                                                          cccACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCt                               >  2:3761069/1‑93 (MQ=255)

                                                           ccACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGCCTCCAGAACTAAACGTTTTAGTCCGGCTa                              <  1:1410806/93‑1 (MQ=255)

                                                           ccACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTa                              <  2:5847799/93‑1 (MQ=255)

                                                              ccGCACCTTGTCCTACCGCCGGAAGAGAGATCTGGGTTGGCAACGCGGCGCGAATACGTGACTCCGGCGCTAAAGGTTTTAGTCCGGCTACgg                           >  1:2067049/1‑93 (MQ=255)

                                                              ccGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACgg                           >  1:5745294/1‑93 (MQ=255)

                                                                gCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCa                         <  1:4938140/93‑1 (MQ=255)

                                                                gCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCa                         >  1:6642827/1‑93 (MQ=255)

                                                                gCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCa                         >  1:7760245/1‑93 (MQ=255)

                                                                cgcccTTGGTCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCa                         <  2:4500783/90‑1 (MQ=255)

                                                                  aCCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAg                       >  2:3094353/1‑93 (MQ=255)

                                                                  aCCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAg                       >  2:6387664/1‑93 (MQ=255)

                                                                  aCCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTCTAGTCCGGCTACGGCAAg                       >  1:1886974/1‑93 (MQ=255)

                                                                   ccTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGa                      >  1:2282617/1‑93 (MQ=255)

                                                                   ccTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGa                      >  1:7437541/1‑93 (MQ=255)

                                                                   ccTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGa                      <  1:312467/93‑1 (MQ=255)

                                                                   ccTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCAGCTACGGCAAGa                      <  2:1923805/93‑1 (MQ=255)

                                                                    cTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGaa                     >  1:6452548/1‑93 (MQ=255)

                                                                    cTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGaa                     <  1:6839500/93‑1 (MQ=255)

                                                                    cTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGaa                     >  2:4140039/1‑93 (MQ=255)

                                                                       gTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAatga                  <  2:2486645/93‑1 (MQ=255)

                                                                        tCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAatgat                 >  1:4793894/1‑93 (MQ=255)

                                                                          cTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATgg               >  2:5441472/1‑93 (MQ=255)

                                                                               gccgGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCg          >  2:7874049/1‑93 (MQ=255)

                                                                                ccgGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGt         <  1:6993158/93‑1 (MQ=255)

                                                                                 cgGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTa        <  1:2518483/93‑1 (MQ=255)

                                                                                  ggAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAt       >  1:2035750/1‑93 (MQ=255)

                                                                                  ggAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAt       >  2:7694136/1‑93 (MQ=255)

                                                                                  ggAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAt       <  1:5060450/93‑1 (MQ=255)

                                                                                  ggAAGAGAGATCTCGGGTGGCAACGCGGAGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAt       >  2:2149077/1‑93 (MQ=255)

                                                                                     agagagATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCg    >  1:6059621/1‑93 (MQ=255)

                                                                                     agagagATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCg    <  2:5758086/93‑1 (MQ=255)

                                                                                     agagagATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCg    <  1:5349816/93‑1 (MQ=255)

                                                                                      gagagaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGc   <  2:7417380/93‑1 (MQ=255)

                                                                                       agagATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGcc  <  1:879144/93‑1 (MQ=255)

                                                                                       agagATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGcc  >  2:5160290/1‑93 (MQ=255)

GTGATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCC  >  NC_000913/3987717‑3987896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 253 total aligned reads displayed.

GTGGTGATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTA  >  NC_000913/3987714‑3987900

GTGGTGATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAG                                                                                               <  SRR4302543.951859/94‑1 (MQ=60)

GTGGTGATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAG                                                                                               <  SRR4302543.7043435/94‑1 (MQ=60)

GTGGTGATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAG                                                                                               >  SRR4302543.7341920/1‑94 (MQ=60)

GTGGTGATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAG                                                                                               >  SRR4302543.4980826/1‑94 (MQ=60)

 TGGTGATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGA                                                                                              <  SRR4302543.4158066/94‑1 (MQ=60)

   GTGATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATC                                                                                            >  SRR4302543.3817176/1‑94 (MQ=60)

   GTGATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATC                                                                                            <  SRR4302543.3199098/94‑1 (MQ=60)

    TGATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATCCCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCT                                                                                           <  SRR4302543.6871661/94‑1 (MQ=60)

     GATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTC                                                                                          >  SRR4302543.266547/1‑94 (MQ=60)

     GATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTC                                                                                          >  SRR4302543.4789727/1‑94 (MQ=60)

     GATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTC                                                                                          >  SRR4302543.5338992/1‑94 (MQ=60)

     GATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTC                                                                                          <  SRR4302543.5495282/94‑1 (MQ=60)

      ATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCG                                                                                         <  SRR4302543.961214/94‑1 (MQ=60)

       TTCAGCGCGGCAAGCAGCTCGCGAGTGCGTTAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGG                                                                                        <  SRR4302543.5564133/94‑1 (MQ=60)

       TTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGG                                                                                        <  SRR4302543.7015120/94‑1 (MQ=60)

       TTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGG                                                                                        <  SRR4302543.4598222/94‑1 (MQ=60)

        TCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGG                                                                                       <  SRR4302543.1672487/94‑1 (MQ=60)

        TCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGG                                                                                       <  SRR4302543.1672488/94‑1 (MQ=60)

         CAGCTCTGCAATCAGCTCGCGAGGGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCTCCTTGTCCTACCGCCGGAAGAGAGATCTCGGGT                                                                                      <  SRR4302543.2685878/94‑1 (MQ=60)

          AGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTG                                                                                     <  SRR4302543.6883508/94‑1 (MQ=60)

          AGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTG                                                                                     <  SRR4302543.6883509/94‑1 (MQ=60)

          AGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTG                                                                                     >  SRR4302543.1545902/1‑94 (MQ=60)

           GCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGG                                                                                    >  SRR4302543.3130825/1‑94 (MQ=60)

            CGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGC                                                                                   >  SRR4302543.6402120/1‑94 (MQ=60)

            CGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGC                                                                                   >  SRR4302543.6402119/1‑94 (MQ=60)

             GCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCA                                                                                  <  SRR4302543.4655149/94‑1 (MQ=60)

             GCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCA                                                                                  >  SRR4302543.3934798/1‑94 (MQ=60)

             GCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCA                                                                                  >  SRR4302543.5542787/1‑94 (MQ=60)

              cggcagctAGCTCGCGAGTGCTTTAACCATCAAGGCGTCATTCAATTCCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAA                                                                                 <  SRR4302543.6787209/86‑1 (MQ=60)

              CGGCAAGCAGCTCGCGAGTGTGTGAATCATTAATGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGTGATCTCGGGTGGCAA                                                                                 >  SRR4302543.7080136/1‑94 (MQ=60)

               GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAAC                                                                                <  SRR4302543.270651/94‑1 (MQ=60)

               GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAAC                                                                                >  SRR4302543.6342284/1‑94 (MQ=60)

               GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAAC                                                                                >  SRR4302543.7442307/1‑94 (MQ=60)

                GCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAAcg                                                                               >  SRR4302543.3459008/1‑92 (MQ=60)

                GCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAAcg                                                                               <  SRR4302543.296712/94‑3 (MQ=60)

                  AAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAAcgcg                                                                             >  SRR4302543.3177253/1‑90 (MQ=60)

                  AAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAAcgcg                                                                             >  SRR4302543.7273019/1‑90 (MQ=60)

                   AGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAAcgcgg                                                                            <  SRR4302543.6098593/94‑6 (MQ=60)

                     CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCCCCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCG                                                                          <  SRR4302543.2481409/94‑1 (MQ=60)

                     CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCG                                                                          >  SRR4302543.2064707/1‑94 (MQ=60)

                     CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCG                                                                          >  SRR4302543.1500498/1‑94 (MQ=60)

                     CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCG                                                                          >  SRR4302543.7664233/1‑94 (MQ=60)

                      cagcgacgcagtgcggaaacagtcaagccggactccatcgCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGC                                                                         <  SRR4302543.6403590/54‑1 (MQ=60)

                      AGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGC                                                                         >  SRR4302543.5656816/1‑94 (MQ=60)

                         TCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAA                                                                      >  SRR4302543.6992193/1‑94 (MQ=60)

                         TCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAA                                                                      <  SRR4302543.5783053/94‑1 (MQ=60)

                           GCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATA                                                                    <  SRR4302543.5191143/94‑1 (MQ=60)

                            CGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATAC                                                                   >  SRR4302543.619162/1‑94 (MQ=60)

                            CGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATAC                                                                   <  SRR4302543.30329/94‑1 (MQ=60)

                             GAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAAcgaggctcgaatacg                                                                  >  SRR4302543.3811976/1‑79 (MQ=60)

                             GAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACG                                                                  <  SRR4302543.945593/94‑1 (MQ=60)

                             GAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACG                                                                  >  SRR4302543.3377398/1‑94 (MQ=60)

                             GAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACG                                                                  <  SRR4302543.2806471/94‑1 (MQ=60)

                              AGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGT                                                                 >  SRR4302543.158761/1‑94 (MQ=60)

                               GTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTG                                                                <  SRR4302543.1485453/94‑1 (MQ=60)

                               GTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTG                                                                <  SRR4302543.1710248/94‑1 (MQ=60)

                                 GCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGAC                                                              <  SRR4302543.3920922/94‑1 (MQ=60)

                                 GCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGAC                                                              >  SRR4302543.1472264/1‑94 (MQ=60)

                                 GCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGAC                                                              <  SRR4302543.1959315/94‑1 (MQ=60)

                                  CGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                             <  SRR4302543.933320/94‑1 (MQ=60)

                                  CGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                             <  SRR4302543.2394433/94‑1 (MQ=60)

                                  CGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                             >  SRR4302543.1125465/1‑94 (MQ=60)

                                  CGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                             <  SRR4302543.5885964/94‑1 (MQ=60)

                                  CGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                             >  SRR4302543.3150914/1‑94 (MQ=60)

                                   GTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTC                                                            <  SRR4302543.4945039/94‑1 (MQ=60)

                                   GTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTC                                                            >  SRR4302543.5851472/1‑94 (MQ=60)

                                   GTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTC                                                            >  SRR4302543.3652237/1‑94 (MQ=60)

                                    TGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCC                                                           <  SRR4302543.4970772/94‑1 (MQ=60)

                                    TGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCC                                                           >  SRR4302543.2289164/1‑94 (MQ=60)

                                    TGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCC                                                           <  SRR4302543.6601906/94‑1 (MQ=60)

                                    TGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGCCCTACCGCCGGAAGAGAGATCTCCGGTGCCAACGCGGCGCGAATACGTGACTCA                                                           >  SRR4302543.2289165/1‑94 (MQ=60)

                                     caaccataAAGGCGGCATTCAATCCCCCCCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCA                                                          <  SRR4302543.3001831/86‑1 (MQ=60)

                                      AATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGCGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAG                                                         <  SRR4302543.624885/94‑1 (MQ=60)

                                      AATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAG                                                         >  SRR4302543.6970198/1‑94 (MQ=60)

                                      AATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAG                                                         >  SRR4302543.3611749/1‑94 (MQ=60)

                                       ATCATCAAGGCGGCATTCAATACCCACCTCTCCTTGTCCTACCTCCGGAAGAGAGATCTCGGGTGTCAACGCGGCGCGAATACGTGACTCCAGA                                                        <  SRR4302543.6926072/94‑1 (MQ=60)

                                        TCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGAC                                                       >  SRR4302543.2371607/1‑94 (MQ=60)

                                        TCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGAC                                                       >  SRR4302543.1096871/1‑94 (MQ=60)

                                         CCTCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACC                                                      >  SRR4302543.3784746/1‑94 (MQ=60)

                                         CATCAAGGCGGCATTCAATACCCACCGCTCCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACC                                                      <  SRR4302543.4290556/94‑1 (MQ=60)

                                         CATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACC                                                      >  SRR4302543.1427212/1‑94 (MQ=60)

                                          ATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCT                                                     >  SRR4302543.3422515/1‑94 (MQ=60)

                                          ATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCT                                                     >  SRR4302543.1277705/1‑94 (MQ=60)

                                          ATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCT                                                     >  SRR4302543.1667911/1‑94 (MQ=60)

                                          ATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCCCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCT                                                     <  SRR4302543.2961879/94‑1 (MQ=60)

                                           TCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTA                                                    <  SRR4302543.1023707/94‑1 (MQ=60)

                                           TCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTA                                                    <  SRR4302543.1244991/94‑1 (MQ=60)

                                            CAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAA                                                   >  SRR4302543.887068/1‑94 (MQ=60)

                                              AGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAC                                                 <  SRR4302543.2922811/94‑1 (MQ=60)

                                              AGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAC                                                 <  SRR4302543.1930863/94‑1 (MQ=60)

                                                 CGGCATTCAATACCCGCCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTT                                              >  SRR4302543.1860958/1‑94 (MQ=60)

                                                  GGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTT                                             <  SRR4302543.6268439/94‑1 (MQ=60)

                                                   GCATTCAATCCCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTT                                            <  SRR4302543.6192108/94‑1 (MQ=60)

                                                   GCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTT                                            >  SRR4302543.5840157/1‑94 (MQ=60)

                                                   GCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTT                                            >  SRR4302543.5725261/1‑94 (MQ=60)

                                                     ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                          >  SRR4302543.5647052/1‑94 (MQ=60)

                                                     ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                          >  SRR4302543.1788204/1‑94 (MQ=60)

                                                     ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                          >  SRR4302543.2293398/1‑94 (MQ=60)

                                                     ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                          >  SRR4302543.6765705/1‑94 (MQ=60)

                                                     ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                          >  SRR4302543.4464757/1‑94 (MQ=60)

                                                     ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                          <  SRR4302543.701265/94‑1 (MQ=60)

                                                     ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                          >  SRR4302543.100849/1‑94 (MQ=60)

                                                     ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                          >  SRR4302543.4127242/1‑94 (MQ=60)

                                                      TTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGT                                         >  SRR4302543.138001/1‑94 (MQ=60)

                                                       TCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTC                                        >  SRR4302543.4407183/1‑94 (MQ=60)

                                                       TCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTC                                        <  SRR4302543.922055/94‑1 (MQ=60)

                                                        CAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCC                                       <  SRR4302543.4718291/94‑1 (MQ=60)

                                                        CAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCC                                       <  SRR4302543.2788840/94‑1 (MQ=60)

                                                        CAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCC                                       <  SRR4302543.7926914/94‑1 (MQ=60)

                                                         AATACCCACCGCGCCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCG                                      <  SRR4302543.2532818/94‑1 (MQ=60)

                                                         AATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCG                                      <  SRR4302543.5398528/94‑1 (MQ=60)

                                                         AATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCG                                      >  SRR4302543.3165073/1‑94 (MQ=60)

                                                         AATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCG                                      <  SRR4302543.156291/94‑1 (MQ=60)

                                                         AATACCCACCGCACCTTGTCCTACCGCAGGAAGAGAGATCTCGGGTGGCAACGCGGCGCAAATCCGCGACTCCAGACCTAACAGTTTTACTCCG                                      >  SRR4302543.6546936/1‑94 (MQ=46)

                                                          ATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGG                                     <  SRR4302543.7759973/94‑1 (MQ=60)

                                                          ATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGG                                     >  SRR4302543.5743730/1‑94 (MQ=60)

                                                            tccccCCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                   <  SRR4302543.409056/89‑1 (MQ=60)

                                                            ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                   <  SRR4302543.1899572/94‑1 (MQ=60)

                                                            ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                   <  SRR4302543.27023/94‑1 (MQ=60)

                                                            ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                   <  SRR4302543.1757623/94‑1 (MQ=60)

                                                            ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                   >  SRR4302543.4688092/1‑94 (MQ=60)

                                                            ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                   <  SRR4302543.4179360/94‑1 (MQ=60)

                                                            ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                   <  SRR4302543.409055/94‑1 (MQ=60)

                                                             CCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTA                                  >  SRR4302543.909969/1‑94 (MQ=60)

                                                             CCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTA                                  >  SRR4302543.5633757/1‑94 (MQ=60)

                                                              CCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAC                                 >  SRR4302543.683401/1‑94 (MQ=60)

                                                              CCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAC                                 >  SRR4302543.3848520/1‑94 (MQ=60)

                                                               CACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACG                                <  SRR4302543.3204854/94‑1 (MQ=60)

                                                               CACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACG                                <  SRR4302543.4892468/94‑1 (MQ=60)

                                                                CCCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGG                               <  SRR4302543.1303717/94‑1 (MQ=60)

                                                                ACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGG                               >  SRR4302543.2085525/1‑94 (MQ=60)

                                                                ACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGG                               >  SRR4302543.5797664/1‑94 (MQ=60)

                                                                  CGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                             <  SRR4302543.4382465/94‑1 (MQ=60)

                                                                  CGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                             >  SRR4302543.215482/1‑94 (MQ=60)

                                                                  CGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                             <  SRR4302543.4546190/94‑1 (MQ=60)

                                                                  CGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                             >  SRR4302543.7833480/1‑94 (MQ=60)

                                                                  CGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                             >  SRR4302543.6705513/1‑94 (MQ=60)

                                                                  CGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                             >  SRR4302543.6565169/1‑94 (MQ=60)

                                                                  CGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                             >  SRR4302543.7454139/1‑94 (MQ=60)

                                                                   GCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAA                            >  SRR4302543.4484080/1‑94 (MQ=60)

                                                                   GCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAA                            >  SRR4302543.642614/1‑94 (MQ=60)

                                                                   GCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAA                            >  SRR4302543.2741370/1‑94 (MQ=60)

                                                                    CACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTCTAGTCCGGCTACGGCAAG                           >  SRR4302543.1903931/1‑94 (MQ=60)

                                                                    CACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGGGGCAACGCGGCGCGAAACCGGGACCCCAGACCTAAACGTTTTAGCCCGGCTACGGCAAG                           >  SRR4302543.5085339/1‑94 (MQ=53)

                                                                     ACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAACCGTTTTAGTCCGGCTACGCCAAGA                          >  SRR4302543.2248476/1‑94 (MQ=60)

                                                                     ACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                          >  SRR4302543.2489898/1‑94 (MQ=60)

                                                                     ACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                          <  SRR4302543.2363573/94‑1 (MQ=60)

                                                                     ACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                          >  SRR4302543.2303475/1‑94 (MQ=60)

                                                                     ACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                          >  SRR4302543.7508835/1‑94 (MQ=60)

                                                                      CCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAA                         >  SRR4302543.6513354/1‑94 (MQ=60)

                                                                      CCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAA                         <  SRR4302543.315288/94‑1 (MQ=60)

                                                                       CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                        >  SRR4302543.6096604/1‑94 (MQ=60)

                                                                       CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                        >  SRR4302543.3011266/1‑94 (MQ=60)

                                                                       CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                        >  SRR4302543.1512944/1‑94 (MQ=60)

                                                                       CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                        <  SRR4302543.6904056/94‑1 (MQ=60)

                                                                       CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                        >  SRR4302543.2678216/1‑94 (MQ=60)

                                                                       CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                        <  SRR4302543.2968573/94‑1 (MQ=60)

                                                                       CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                        <  SRR4302543.6904057/94‑1 (MQ=60)

                                                                          GTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAT                     <  SRR4302543.4599261/94‑1 (MQ=60)

                                                                          GTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAT                     <  SRR4302543.7626738/94‑1 (MQ=60)

                                                                          GTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAT                     >  SRR4302543.6659937/1‑94 (MQ=60)

                                                                          GTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAT                     <  SRR4302543.5987632/94‑1 (MQ=60)

                                                                          GTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAT                     >  SRR4302543.4837711/1‑94 (MQ=60)

                                                                           TCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATG                    >  SRR4302543.4947588/1‑94 (MQ=60)

                                                                            CCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGG                   <  SRR4302543.781099/94‑1 (MQ=60)

                                                                             CTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGC                  <  SRR4302543.2953192/94‑1 (MQ=60)

                                                                              CACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCA                 <  SRR4302543.6692631/94‑1 (MQ=60)

                                                                                CCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATC               <  SRR4302543.7211615/94‑1 (MQ=60)

                                                                                 CGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCG              <  SRR4302543.3626141/94‑1 (MQ=60)

                                                                                   CCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTA            >  SRR4302543.20676/1‑94 (MQ=60)

                                                                                   CCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTA            <  SRR4302543.7059001/94‑1 (MQ=60)

                                                                                    CGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT           >  SRR4302543.3998149/1‑94 (MQ=60)

                                                                                    CGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT           >  SRR4302543.2054027/1‑94 (MQ=60)

                                                                                    CGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT           <  SRR4302543.3247273/94‑1 (MQ=60)

                                                                                    CGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT           <  SRR4302543.2541364/94‑1 (MQ=60)

                                                                                    CGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT           >  SRR4302543.5095895/1‑94 (MQ=60)

                                                                                     GGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT          >  SRR4302543.3724283/1‑94 (MQ=60)

                                                                                     GGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT          <  SRR4302543.7453075/94‑1 (MQ=60)

                                                                                     GGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT          <  SRR4302543.5106429/94‑1 (MQ=60)

                                                                                     GGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT          <  SRR4302543.7542548/94‑1 (MQ=60)

                                                                                     GGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT          >  SRR4302543.2993353/1‑94 (MQ=60)

                                                                                      GAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTC         >  SRR4302543.2144581/1‑94 (MQ=60)

                                                                                      GAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTC         <  SRR4302543.7363642/94‑1 (MQ=60)

                                                                                      GAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCAGCTACGGCAAGAATGATGGCATCGTATTC         >  SRR4302543.967981/1‑94 (MQ=60)

                                                                                       AAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG        >  SRR4302543.5345739/1‑94 (MQ=60)

                                                                                       AAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG        >  SRR4302543.2621852/1‑94 (MQ=60)

                                                                                       AAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG        >  SRR4302543.6116985/1‑94 (MQ=60)

                                                                                       AAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG        <  SRR4302543.5034286/94‑1 (MQ=60)

                                                                                       AAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG        >  SRR4302543.4858628/1‑94 (MQ=60)

                                                                                       AAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG        >  SRR4302543.4858627/1‑94 (MQ=60)

                                                                                       AAGAAAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGAATCGTATTCG        >  SRR4302543.4145606/1‑94 (MQ=60)

                                                                                        AGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGC       <  SRR4302543.5398231/94‑1 (MQ=60)

                                                                                         GAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCC      <  SRR4302543.291399/94‑1 (MQ=60)

                                                                                         GAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCC      <  SRR4302543.6438929/94‑1 (MQ=60)

                                                                                          AGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCG     <  SRR4302543.886951/94‑1 (MQ=60)

                                                                                          AGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGCTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCG     <  SRR4302543.7987020/94‑1 (MQ=60)

                                                                                           GAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGT    >  SRR4302543.3595897/1‑94 (MQ=60)

                                                                                            AGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTT   >  SRR4302543.7943560/1‑94 (MQ=60)

                                                                                            AGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTT   >  SRR4302543.2342357/1‑94 (MQ=60)

                                                                                             GATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTA  >  SRR4302543.7095148/1‑94 (MQ=60)

GTGGTGATTCAGCGCGGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTA  >  NC_000913/3987714‑3987900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`