Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,987,822 2 bp→CG coding (578‑579/963 nt) hemC ← porphobilinogen deaminase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,987,8220GC99.7% 1224.7 / NA 387G193A (GGC→GCG) hemCporphobilinogen deaminase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (202/184);  minor base A (1/0);  total (203/184)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*NC_0009133,987,8230CG100.0% 1203.3 / NA 384G193A (GGC→GCG) hemCporphobilinogen deaminase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (198/186);  total (198/186)

Only 100 of 403 total aligned reads displayed.

CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTG  >  NC_000913/3987735‑3987909
                                                                                       ||                                                                                      
 agcTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACgcggcg                                                                                   >  1:7592102/1‑93 (MQ=255)
  gcTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGgcgc                                                                                  >  1:5605742/1‑93 (MQ=255)
  gcTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGgcgc                                                                                  >  2:2730205/1‑93 (MQ=255)
   cTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGcgcg                                                                                 <  2:5660720/93‑1 (MQ=255)
   cTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGcgcg                                                                                 >  2:4960255/1‑93 (MQ=255)
    tCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGTTGGCAACTCGGCGCGa                                                                                >  2:4039787/1‑93 (MQ=255)
    tCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGa                                                                                >  2:5949774/1‑93 (MQ=255)
    tCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGa                                                                                <  1:5730763/93‑1 (MQ=255)
     cgcgAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGaa                                                                               >  1:6927059/1‑93 (MQ=255)
        gAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATAc                                                                            >  2:4849735/1‑93 (MQ=255)
        gAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATAc                                                                            >  2:195165/1‑93 (MQ=255)
        gAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATAc                                                                            <  2:1858332/93‑1 (MQ=255)
         aGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACg                                                                           >  1:3347260/1‑93 (MQ=255)
         aGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACg                                                                           >  2:4714069/1‑93 (MQ=255)
           tGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTg                                                                         >  2:1660746/1‑93 (MQ=255)
            gCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGa                                                                        <  1:3886613/93‑1 (MQ=255)
            gCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGa                                                                        >  2:6793549/1‑93 (MQ=255)
             cGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGAc                                                                       >  1:1459104/1‑93 (MQ=255)
               tGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTc                                                                     >  1:5798725/1‑93 (MQ=255)
               tGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTc                                                                     <  1:4925900/93‑1 (MQ=255)
                gAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTcc                                                                    <  2:1444019/93‑1 (MQ=255)
                gAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGCCCTACCGCCGGAAGAGAGATCTCCGGTGCCAACGCGGCGCGAATACGTGACTca                                                                    >  1:2268446/1‑92 (MQ=255)
                caaccataaAGGCGGCATTCAATCCCCCCCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTcc                                                                    <  1:2974817/89‑1 (MQ=255)
                 aaTCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCa                                                                   >  1:6260601/1‑93 (MQ=255)
                 aaTCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCa                                                                   >  2:7288861/1‑93 (MQ=255)
                  atcatcAAGGCGGCATTCAATACCCACCTCTCCTTGTCCTACCTCCGGAAGAGAGATCTCGGGTGTCAACGCGGCGCGAATACGTGACTCCAg                                                                  <  1:6861409/93‑1 (MQ=255)
                  atcatcAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAg                                                                  >  1:242493/1‑93 (MQ=255)
                  atcatcAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAg                                                                  >  2:1094870/1‑93 (MQ=255)
                  atcatcAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAg                                                                  >  1:3580122/1‑93 (MQ=255)
                    catcaAGGCGGCATTCAATACCCACCGCTCCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGAc                                                                <  1:4251957/93‑1 (MQ=255)
                     ctcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGAcc                                                               >  1:3751737/2‑93 (MQ=255)
                     atcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCCCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGAcc                                                               <  1:2935230/93‑1 (MQ=255)
                      tcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCt                                                              >  2:2132850/1‑93 (MQ=255)
                      tcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCt                                                              <  1:1014727/93‑1 (MQ=255)
                      tcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCt                                                              >  1:1653121/1‑93 (MQ=255)
                      tcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCt                                                              <  2:4332535/93‑1 (MQ=255)
                       caAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTa                                                             <  2:7797143/93‑1 (MQ=255)
                         aGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTaaa                                                           <  1:1974145/93‑1 (MQ=255)
                              gcATTCAATCCCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGttt                                                      <  1:6134001/93‑1 (MQ=255)
                                aTTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTa                                                    >  1:6473565/1‑93 (MQ=255)
                                 ttCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAg                                                   >  1:4424663/1‑93 (MQ=255)
                                 ttCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAg                                                   >  2:4479438/1‑93 (MQ=255)
                                 ttCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAg                                                   >  1:1772362/1‑93 (MQ=255)
                                  tCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGt                                                  <  1:914034/93‑1 (MQ=255)
                                   cAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTc                                                 <  2:2892790/93‑1 (MQ=255)
                                   cAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTc                                                 <  2:4178898/93‑1 (MQ=255)
                                   cAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTc                                                 <  1:7852922/93‑1 (MQ=255)
                                     aTACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCg                                               >  1:3136856/1‑93 (MQ=255)
                                       tccccccGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGc                                             <  1:405318/92‑1 (MQ=255)
                                       aCCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGc                                             <  1:1882652/93‑1 (MQ=255)
                                        cccACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAAAGCGGCGCGCATACGTGACTCCAGACCTAAACGTTTTAGTCCGCCt                                            >  2:3761068/1‑93 (MQ=255)
                                          cACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAc                                          >  1:677167/1‑93 (MQ=255)
                                           cccGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACg                                         <  1:1292215/92‑1 (MQ=255)
                                            ccGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACgg                                        >  2:3931299/1‑93 (MQ=255)
                                              gCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCa                                      >  2:6893076/1‑93 (MQ=255)
                                              gCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCa                                      >  1:213655/1‑93 (MQ=255)
                                              cgcccTTGGTCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCa                                      <  2:4500783/90‑1 (MQ=255)
                                               cACCTTGTCCTAGCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCaa                                     <  2:5329402/93‑1 (MQ=255)
                                               cACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCaa                                     >  1:2716685/1‑93 (MQ=255)
                                                aCCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAg                                    >  2:6387664/1‑93 (MQ=255)
                                                aCCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAg                                    >  2:3094353/1‑93 (MQ=255)
                                                 ccTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGa                                   >  1:7437541/1‑93 (MQ=255)
                                                   ttGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAat                                 >  1:1499457/1‑93 (MQ=255)
                                                     gTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAatga                               <  1:4557765/93‑1 (MQ=255)
                                                      tCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCGAGAatgat                              >  2:510658/1‑93 (MQ=255)
                                                      tCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAatgat                              >  1:6597760/1‑93 (MQ=255)
                                                        cTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATgg                            >  2:5441472/1‑93 (MQ=255)
                                                        cTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATgg                            >  2:3326927/1‑93 (MQ=255)
                                                         tACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGc                           >  2:3437059/1‑93 (MQ=255)
                                                         tACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGc                           >  2:7136994/1‑93 (MQ=255)
                                                               cgGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTa                     <  1:2518483/93‑1 (MQ=255)
                                                                ggAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAt                    >  1:3101808/1‑93 (MQ=255)
                                                                ggAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAt                    <  1:5060450/93‑1 (MQ=255)
                                                                ggAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAt                    <  2:2413006/93‑1 (MQ=255)
                                                                 gAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAtt                   <  1:7293257/93‑1 (MQ=255)
                                                                 gAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAtt                   >  2:2490569/1‑93 (MQ=255)
                                                                  aaGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCAGCTACGGCAAGAATGATGGCATCGTATTc                  >  1:959572/1‑93 (MQ=255)
                                                                   agagagATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCg                 >  1:4814661/1‑93 (MQ=255)
                                                                   agagagATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCg                 <  1:5349816/93‑1 (MQ=255)
                                                                    gagagaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGc                <  1:288823/93‑1 (MQ=255)
                                                                    gagagaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGc                <  2:4543363/93‑1 (MQ=255)
                                                                    gagagaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGc                >  2:3846785/1‑93 (MQ=255)
                                                                    gagagaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAACGATGGCATCGTATTCGc                >  2:5212782/1‑93 (MQ=255)
                                                                     agagATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGcc               <  1:879144/93‑1 (MQ=255)
                                                                      gagaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCg              >  2:5769350/4‑93 (MQ=255)
                                                                      gagaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCg              <  2:7505593/90‑1 (MQ=255)
                                                                       agaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGt             <  2:6567030/91‑1 (MQ=255)
                                                                        gaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGtt            >  1:2321260/2‑93 (MQ=255)
                                                                         aTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTa           >  2:7557612/1‑93 (MQ=255)
                                                                         aTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTa           >  1:7027680/1‑93 (MQ=255)
                                                                         aTCGCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAATCGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTa           <  2:3236574/93‑1 (MQ=255)
                                                                          tctcGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTAt          >  2:1278256/1‑93 (MQ=255)
                                                                           ctcGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATc         <  1:2061657/93‑1 (MQ=255)
                                                                            tcGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATcc        >  1:4700487/1‑93 (MQ=255)
                                                                            tcGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATcc        >  2:2626528/1‑93 (MQ=255)
                                                                             cGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCa       <  1:1128163/93‑1 (MQ=255)
                                                                              gggTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAg      >  2:6073233/1‑93 (MQ=255)
                                                                              gggTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAg      >  2:1819151/1‑93 (MQ=255)
                                                                                gTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGtt    <  2:845321/93‑1 (MQ=255)
                                                                                 tGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCTCCGTTATCCAGttt   <  1:6026281/93‑1 (MQ=255)
                                                                                       ||                                                                                      
CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTG  >  NC_000913/3987735‑3987909

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 224 total aligned reads displayed.
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTGCT  >  NC_000913/3987729‑3987911
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GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAAC                                                                                           <  SRR4302543.270651/94‑1 (MQ=60)
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAAC                                                                                           >  SRR4302543.6342284/1‑94 (MQ=60)
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAAC                                                                                           >  SRR4302543.7442307/1‑94 (MQ=60)
     GCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGC                                                                                      <  SRR4302543.2565683/94‑1 (MQ=60)
      CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCG                                                                                     >  SRR4302543.7664233/1‑94 (MQ=60)
      CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCG                                                                                     <  SRR4302543.2700666/94‑1 (MQ=60)
      CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCG                                                                                     >  SRR4302543.2064707/1‑94 (MQ=60)
      CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCG                                                                                     >  SRR4302543.5702105/1‑94 (MQ=60)
      CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCG                                                                                     >  SRR4302543.1500498/1‑94 (MQ=60)
       AGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGC                                                                                    <  SRR4302543.6403591/94‑1 (MQ=60)
       AGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGC                                                                                    >  SRR4302543.5656816/1‑94 (MQ=60)
          TCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAA                                                                                 <  SRR4302543.2931007/94‑1 (MQ=60)
          TCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAA                                                                                 >  SRR4302543.6992193/1‑94 (MQ=60)
           CGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAAT                                                                                <  SRR4302543.4815488/94‑1 (MQ=60)
            GCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATA                                                                               <  SRR4302543.5191143/94‑1 (MQ=60)
             CGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATAC                                                                              >  SRR4302543.619162/1‑94 (MQ=60)
             CGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATAC                                                                              <  SRR4302543.30329/94‑1 (MQ=60)
             CGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATAC                                                                              <  SRR4302543.5833546/94‑1 (MQ=60)
              GAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACG                                                                             >  SRR4302543.3377398/1‑94 (MQ=60)
              GAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACG                                                                             <  SRR4302543.2806471/94‑1 (MQ=60)
              GAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACG                                                                             <  SRR4302543.1223937/94‑1 (MQ=60)
              GAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACG                                                                             <  SRR4302543.945593/94‑1 (MQ=60)
               AGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGT                                                                            >  SRR4302543.5975571/1‑94 (MQ=60)
               AGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGT                                                                            >  SRR4302543.158761/1‑94 (MQ=60)
                GTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTG                                                                           <  SRR4302543.1710248/94‑1 (MQ=60)
                GTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTG                                                                           >  SRR4302543.6137484/1‑94 (MQ=60)
                GTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTG                                                                           <  SRR4302543.1485453/94‑1 (MQ=60)
                  GCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGAC                                                                         >  SRR4302543.1472264/1‑94 (MQ=60)
                  GCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGAC                                                                         <  SRR4302543.3920922/94‑1 (MQ=60)
                  GCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGAC                                                                         <  SRR4302543.1959315/94‑1 (MQ=60)
                   CGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                                        >  SRR4302543.3150914/1‑94 (MQ=60)
                   CGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                                        <  SRR4302543.3239035/94‑1 (MQ=60)
                   CGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                                        <  SRR4302543.2394433/94‑1 (MQ=60)
                   CGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                                        <  SRR4302543.933320/94‑1 (MQ=60)
                   CGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                                        <  SRR4302543.5885964/94‑1 (MQ=60)
                   CGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                                        >  SRR4302543.1125465/1‑94 (MQ=60)
                    GTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTC                                                                       >  SRR4302543.3652237/1‑94 (MQ=60)
                    GTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTC                                                                       >  SRR4302543.5851472/1‑94 (MQ=60)
                    GTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTC                                                                       <  SRR4302543.4945039/94‑1 (MQ=60)
                     TGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCC                                                                      <  SRR4302543.4970772/94‑1 (MQ=60)
                     TGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCC                                                                      <  SRR4302543.6601906/94‑1 (MQ=60)
                     TGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCC                                                                      >  SRR4302543.2289164/1‑94 (MQ=60)
                      caaccataAAGGCGGCATTCAATCCCCCCCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCA                                                                     <  SRR4302543.3001831/86‑1 (MQ=60)
                      GAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCA                                                                     >  SRR4302543.6319651/1‑94 (MQ=60)
                      GAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCA                                                                     >  SRR4302543.6991935/1‑94 (MQ=60)
                       AATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGCGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAG                                                                    <  SRR4302543.624885/94‑1 (MQ=60)
                       AATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAG                                                                    >  SRR4302543.3611749/1‑94 (MQ=60)
                       AATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAG                                                                    >  SRR4302543.244596/1‑94 (MQ=60)
                        ATCATCAAGGCGGCATTCAATACCCACCTCTCCTTGTCCTACCTCCGGAAGAGAGATCTCGGGTGTCAACGCGGCGCGAATACGTGACTCCAGA                                                                   <  SRR4302543.6926072/94‑1 (MQ=60)
                         TCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGAC                                                                  >  SRR4302543.2371607/1‑94 (MQ=60)
                         TCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGAC                                                                  >  SRR4302543.1096871/1‑94 (MQ=60)
                          CCTCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACC                                                                 >  SRR4302543.3784746/1‑94 (MQ=60)
                          CATCAAGGCGGCATTCAATACCCACCGCTCCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACC                                                                 <  SRR4302543.4290556/94‑1 (MQ=60)
                          CATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACC                                                                 >  SRR4302543.1427212/1‑94 (MQ=60)
                          CATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACC                                                                 >  SRR4302543.4650429/1‑94 (MQ=60)
                           ATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCT                                                                >  SRR4302543.1277705/1‑94 (MQ=60)
                           ATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCT                                                                >  SRR4302543.3422515/1‑94 (MQ=60)
                           ATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCT                                                                >  SRR4302543.1667911/1‑94 (MQ=60)
                           ATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCT                                                                >  SRR4302543.2991109/1‑94 (MQ=60)
                           ATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCCCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCT                                                                <  SRR4302543.2961879/94‑1 (MQ=60)
                            TCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTA                                                               >  SRR4302543.4142656/1‑94 (MQ=60)
                            TCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTA                                                               <  SRR4302543.1023707/94‑1 (MQ=60)
                            TCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTA                                                               <  SRR4302543.90811/94‑1 (MQ=60)
                            TCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTA                                                               <  SRR4302543.1244991/94‑1 (MQ=60)
                             CAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAA                                                              >  SRR4302543.887068/1‑94 (MQ=60)
                               AGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAC                                                            <  SRR4302543.2922811/94‑1 (MQ=60)
                               AGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAC                                                            <  SRR4302543.1991844/94‑1 (MQ=60)
                               AGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAC                                                            <  SRR4302543.1930863/94‑1 (MQ=60)
                                   GGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTT                                                        <  SRR4302543.6268439/94‑1 (MQ=60)
                                    GCATTCAATCCCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTT                                                       <  SRR4302543.6192108/94‑1 (MQ=60)
                                    GCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTT                                                       >  SRR4302543.5840157/1‑94 (MQ=60)
                                    GCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTT                                                       >  SRR4302543.5725261/1‑94 (MQ=60)
                                    GCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTT                                                       >  SRR4302543.3501760/1‑94 (MQ=60)
                                     CATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTA                                                      >  SRR4302543.6534550/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                     >  SRR4302543.4464757/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                     >  SRR4302543.4127242/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                     >  SRR4302543.1788204/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                     >  SRR4302543.100849/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                     <  SRR4302543.7521871/94‑1 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                     >  SRR4302543.161244/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                     <  SRR4302543.701265/94‑1 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                     >  SRR4302543.2260169/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                     >  SRR4302543.2293398/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                     >  SRR4302543.5647052/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                     >  SRR4302543.6765705/1‑94 (MQ=60)
                                       TTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGT                                                    >  SRR4302543.138001/1‑94 (MQ=60)
                                        TCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTC                                                   >  SRR4302543.4407183/1‑94 (MQ=60)
                                        TCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTC                                                   <  SRR4302543.922055/94‑1 (MQ=60)
                                         CAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCC                                                  <  SRR4302543.2788840/94‑1 (MQ=60)
                                         CAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCC                                                  <  SRR4302543.7926914/94‑1 (MQ=60)
                                          AATACCCACCGCGCCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCG                                                 <  SRR4302543.2532818/94‑1 (MQ=60)
                                          AATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCG                                                 <  SRR4302543.5398528/94‑1 (MQ=60)
                                          AATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCG                                                 >  SRR4302543.3165073/1‑94 (MQ=60)
                                          AATACCCACCGCACCTTGTCCTACCGCAGGAAGAGAGATCTCGGGTGGCAACGCGGCGCAAATCCGCGACTCCAGACCTAACAGTTTTACTCCG                                                 >  SRR4302543.6546936/1‑94 (MQ=46)
                                           ATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGG                                                <  SRR4302543.7759973/94‑1 (MQ=60)
                                           ATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGG                                                >  SRR4302543.5743730/1‑94 (MQ=60)
                                             tccccCCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                              <  SRR4302543.409056/89‑1 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                              >  SRR4302543.4688092/1‑94 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                              <  SRR4302543.1899572/94‑1 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                              <  SRR4302543.4179360/94‑1 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                              <  SRR4302543.409055/94‑1 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                              <  SRR4302543.27023/94‑1 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                              <  SRR4302543.1757623/94‑1 (MQ=60)
                                              CCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTA                                             >  SRR4302543.5633757/1‑94 (MQ=60)
                                              CCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTA                                             >  SRR4302543.909969/1‑94 (MQ=60)
                                               CCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGCCTCCAGAACTAAACGTTTTAGTCCGGCTAC                                            <  SRR4302543.1423557/94‑1 (MQ=60)
                                               CCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAC                                            >  SRR4302543.3848520/1‑94 (MQ=60)
                                               CCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAC                                            >  SRR4302543.683400/1‑94 (MQ=60)
                                               CCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAC                                            >  SRR4302543.683401/1‑94 (MQ=60)
                                                CACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACG                                           <  SRR4302543.3204854/94‑1 (MQ=60)
                                                CACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACG                                           <  SRR4302543.4892468/94‑1 (MQ=60)
                                                CACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACG                                           >  SRR4302543.2335402/1‑94 (MQ=60)
                                                 ACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTGGGTTGGCAACGCGGCGCGAATACGTGACTCCGGCGCTAAAGGTTTTAGTCCGGCTACGG                                          >  SRR4302543.2085526/1‑94 (MQ=53)
                                                 ACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGG                                          >  SRR4302543.2085525/1‑94 (MQ=60)
                                                 ACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGG                                          >  SRR4302543.5797664/1‑94 (MQ=60)
                                                   CGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                                        >  SRR4302543.7454139/1‑94 (MQ=60)
                                                   CGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                                        >  SRR4302543.7833480/1‑94 (MQ=60)
                                                   CGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                                        >  SRR4302543.6705513/1‑94 (MQ=60)
                                                   CGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                                        >  SRR4302543.6565169/1‑94 (MQ=60)
                                                   CGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                                        <  SRR4302543.4382465/94‑1 (MQ=60)
                                                   CGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                                        >  SRR4302543.215482/1‑94 (MQ=60)
                                                   CGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                                        <  SRR4302543.4546190/94‑1 (MQ=60)
                                                    GCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAA                                       >  SRR4302543.642614/1‑94 (MQ=60)
                                                    GCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAA                                       <  SRR4302543.4983107/94‑1 (MQ=60)
                                                    GCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAA                                       >  SRR4302543.4484080/1‑94 (MQ=60)
                                                     CACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTCTAGTCCGGCTACGGCAAG                                      >  SRR4302543.1903931/1‑94 (MQ=60)
                                                     CACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGGGGCAACGCGGCGCGAAACCGGGACCCCAGACCTAAACGTTTTAGCCCGGCTACGGCAAG                                      >  SRR4302543.5085339/1‑94 (MQ=53)
                                                      ACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAACCGTTTTAGTCCGGCTACGCCAAGA                                     >  SRR4302543.2248476/1‑94 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                     >  SRR4302543.2489898/1‑94 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                     <  SRR4302543.2363573/94‑1 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                     >  SRR4302543.2303475/1‑94 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                     >  SRR4302543.7508835/1‑94 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAGATCCCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                     >  SRR4302543.2774775/1‑94 (MQ=60)
                                                       CCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCTAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAA                                    >  SRR4302543.1503462/1‑94 (MQ=60)
                                                       CCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAA                                    <  SRR4302543.188882/94‑1 (MQ=60)
                                                       CCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAA                                    >  SRR4302543.6513354/1‑94 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                                   <  SRR4302543.6904056/94‑1 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                                   <  SRR4302543.6904057/94‑1 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                                   <  SRR4302543.3155627/94‑1 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                                   >  SRR4302543.1512944/1‑94 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                                   >  SRR4302543.3011266/1‑94 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                                   >  SRR4302543.7932382/1‑94 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                                   <  SRR4302543.7034762/94‑1 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                                   >  SRR4302543.2678216/1‑94 (MQ=60)
                                                           GTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAT                                <  SRR4302543.5987632/94‑1 (MQ=60)
                                                           GTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAT                                <  SRR4302543.1677589/94‑1 (MQ=60)
                                                           GTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAT                                >  SRR4302543.4837711/1‑94 (MQ=60)
                                                           GTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAT                                <  SRR4302543.4599261/94‑1 (MQ=60)
                                                             CCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGG                              <  SRR4302543.781099/94‑1 (MQ=60)
                                                              CTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGC                             <  SRR4302543.2953192/94‑1 (MQ=60)
                                                               CACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCA                            <  SRR4302543.6692631/94‑1 (MQ=60)
                                                                ACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCAT                           <  SRR4302543.4522523/94‑1 (MQ=60)
                                                                 CCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATC                          <  SRR4302543.7211615/94‑1 (MQ=60)
                                                                  CGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCG                         <  SRR4302543.3626141/94‑1 (MQ=60)
                                                                    CCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTA                       <  SRR4302543.7059001/94‑1 (MQ=60)
                                                                     CGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT                      >  SRR4302543.5095895/1‑94 (MQ=60)
                                                                     CGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT                      <  SRR4302543.2541364/94‑1 (MQ=60)
                                                                     CGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT                      <  SRR4302543.948453/94‑1 (MQ=60)
                                                                     CGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT                      >  SRR4302543.2054027/1‑94 (MQ=60)
                                                                     CGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT                      >  SRR4302543.3129706/1‑94 (MQ=60)
                                                                     CGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT                      <  SRR4302543.3247273/94‑1 (MQ=60)
                                                                     CGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT                      >  SRR4302543.3998149/1‑94 (MQ=60)
                                                                      GGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT                     <  SRR4302543.5106429/94‑1 (MQ=60)
                                                                      GGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT                     <  SRR4302543.7542548/94‑1 (MQ=60)
                                                                      GGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT                     >  SRR4302543.2993353/1‑94 (MQ=60)
                                                                      GGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT                     <  SRR4302543.7453075/94‑1 (MQ=60)
                                                                      GGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT                     >  SRR4302543.3724283/1‑94 (MQ=60)
                                                                       GAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTC                    >  SRR4302543.2144581/1‑94 (MQ=60)
                                                                       GAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTC                    <  SRR4302543.7363642/94‑1 (MQ=60)
                                                                       GAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCAGCTACGGCAAGAATGATGGCATCGTATTC                    >  SRR4302543.967981/1‑94 (MQ=60)
                                                                        AAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG                   >  SRR4302543.2621852/1‑94 (MQ=60)
                                                                        AAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG                   <  SRR4302543.5034286/94‑1 (MQ=60)
                                                                        AAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG                   >  SRR4302543.5345739/1‑94 (MQ=60)
                                                                        AAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG                   >  SRR4302543.4858628/1‑94 (MQ=60)
                                                                        AAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG                   >  SRR4302543.4858627/1‑94 (MQ=60)
                                                                        AAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG                   >  SRR4302543.6116985/1‑94 (MQ=60)
                                                                        AAGAAAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGAATCGTATTCG                   >  SRR4302543.4145606/1‑94 (MQ=60)
                                                                         AGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGC                  <  SRR4302543.5398231/94‑1 (MQ=60)
                                                                          GAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCC                 <  SRR4302543.291399/94‑1 (MQ=60)
                                                                          GAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCC                 <  SRR4302543.6438929/94‑1 (MQ=60)
                                                                           AGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGCTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCG                <  SRR4302543.7987020/94‑1 (MQ=60)
                                                                            GAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGT               <  SRR4302543.740869/94‑1 (MQ=60)
                                                                             AGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTT              >  SRR4302543.2342357/1‑94 (MQ=60)
                                                                             AGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTT              >  SRR4302543.7943560/1‑94 (MQ=60)
                                                                              GATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTA             >  SRR4302543.7095148/1‑94 (MQ=60)
                                                                              GATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTA             <  SRR4302543.3817611/94‑1 (MQ=60)
                                                                               ATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCTGTTAT            >  SRR4302543.6983774/1‑94 (MQ=60)
                                                                               ATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTAT            <  SRR4302543.5445980/94‑1 (MQ=60)
                                                                               ATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTAT            >  SRR4302543.30619/1‑94 (MQ=60)
                                                                                 CTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCC          >  SRR4302543.4743418/1‑94 (MQ=60)
                                                                                 CTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCC          <  SRR4302543.2080096/94‑1 (MQ=60)
                                                                                   CGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAG        <  SRR4302543.1138405/94‑1 (MQ=60)
                                                                                   CGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAG        <  SRR4302543.1807602/94‑1 (MQ=60)
                                                                                   CGGGTGGAAACGCGGCGCGAATACGTCACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAG        <  SRR4302543.1138404/94‑1 (MQ=60)
                                                                                    GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGT       >  SRR4302543.7131661/1‑94 (MQ=60)
                                                                                      GTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTT     >  SRR4302543.6581339/1‑94 (MQ=60)
                                                                                       TGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCTCCGTTATCCAGTTTG    <  SRR4302543.6082423/94‑1 (MQ=60)
                                                                                        GGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCAT‑GTATTCGCCGTTATTCAGTTTGCT  >  SRR4302543.3555305/1‑94 (MQ=60)
                                                                                         GCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTGCT  <  SRR4302543.4850126/94‑1 (MQ=60)
                                                                                         GCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTGCT  <  SRR4302543.1952342/94‑1 (MQ=60)
                                                                                             |                                                                                         
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTGCT  >  NC_000913/3987729‑3987911

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑