Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,998,290 +G coding (379/486 nt) b4566 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,998,2891.G99.7% 1140.6 / ‑4.2 362coding (380/486 nt)b4566hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/1);  new base G (203/158);  total (203/159)
Fisher's exact test for biased strand distribution p-value = 4.39e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 392 total aligned reads displayed.

GACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCA‑GACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCAT  >  NC_000913/3998197‑3998376
                                                                                              |                                                                                       
gACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCa                                                                                          <  1:2971416/93‑1 (MQ=255)
 aCTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCA‑g                                                                                        <  2:1202547/93‑1 (MQ=255)
  cTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCA‑gg                                                                                       >  2:4086115/1‑92 (MQ=255)
   tGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCA‑gga                                                                                      >  1:6444214/1‑91 (MQ=255)
       ccGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGa                                                                                   >  1:6145021/1‑93 (MQ=255)
       ccGCAAACTCAATCTCTTTACTGGTTTTGAAGCCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGa                                                                                   <  1:3476789/93‑1 (MQ=255)
          cAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATaa                                                                                >  2:2391825/1‑93 (MQ=255)
           aaaCTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATaaa                                                                               >  1:7833500/1‑93 (MQ=255)
           aaaCTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATaaa                                                                               >  1:7150561/1‑93 (MQ=255)
            aaCTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAg                                                                              >  2:4704844/1‑93 (MQ=255)
                gAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAAt                                                                          >  2:618556/1‑93 (MQ=255)
                gAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAAt                                                                          >  2:6314006/1‑93 (MQ=255)
                 aaTCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAAtt                                                                         >  2:5454981/1‑93 (MQ=255)
                 aaTCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAAtt                                                                         >  2:6033417/1‑93 (MQ=255)
                 aaTCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAAtt                                                                         >  1:474784/1‑93 (MQ=255)
                 aaTCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAAAACG‑CCGCCAGGACGGATAAAGAAAtt                                                                         >  2:2775474/1‑93 (MQ=255)
                   tctcTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTcc                                                                       >  2:3584520/1‑93 (MQ=255)
                   tctcTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTcc                                                                       <  1:1018525/93‑1 (MQ=255)
                    ctctTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTccc                                                                      <  1:1497250/93‑1 (MQ=255)
                      ctTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCtt                                                                    >  2:5903860/1‑93 (MQ=255)
                       tttACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTc                                                                   >  1:5241052/1‑93 (MQ=255)
                        ttACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCTCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCa                                                                  >  1:3758434/1‑93 (MQ=255)
                        ttACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCa                                                                  <  2:807367/93‑1 (MQ=255)
                         tACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCAc                                                                 >  2:7221260/1‑93 (MQ=255)
                         tACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCAc                                                                 >  1:4799056/1‑93 (MQ=255)
                          aCTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCAcc                                                                <  2:1412085/93‑1 (MQ=255)
                          aCTGGTATTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCAcc                                                                <  1:386935/93‑1 (MQ=255)
                           cTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCt                                                               >  2:7476789/1‑93 (MQ=255)
                            tGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTg                                                              >  2:2276985/1‑93 (MQ=255)
                              tttttAAAGGAATCAAGAGGAACATGGCCAACTTAACCCCCCCCG‑CCTAAAACCCGCCCGCAG‑GACGGATAAAGAAATTCCCTTCACCTGAAg                                                           <  1:5536458/92‑1 (MQ=255)
                              gTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGaa                                                            <  2:4467392/93‑1 (MQ=255)
                              gTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGaa                                                            >  1:6796096/1‑93 (MQ=255)
                              gTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGaa                                                            <  1:7725683/93‑1 (MQ=255)
                                  tGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCga                                                        <  2:3112771/93‑1 (MQ=255)
                                   gAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCgag                                                       >  1:5068640/1‑93 (MQ=255)
                                    aaGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCgaga                                                      >  1:6938269/1‑93 (MQ=255)
                                      ggCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGAtt                                                    <  1:2321414/93‑1 (MQ=255)
                                         aTCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTaa                                                 <  1:3108708/93‑1 (MQ=255)
                                          tCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAc                                                >  1:897221/1‑93 (MQ=255)
                                          tCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAc                                                >  1:181651/1‑93 (MQ=255)
                                          tCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAc                                                <  1:5901283/93‑1 (MQ=255)
                                          tCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAc                                                >  2:3449729/1‑93 (MQ=255)
                                          tCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAc                                                >  1:7410395/1‑93 (MQ=255)
                                           ccAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACg                                               >  1:2458154/1‑93 (MQ=255)
                                            cAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGc                                              >  1:568809/1‑93 (MQ=255)
                                               acgaacgaTGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCAc                                           <  2:3849494/93‑1 (MQ=255)
                                                cgaacgaTGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCAcc                                          >  1:6258520/1‑93 (MQ=255)
                                                  aacgaTGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCtt                                        >  1:3192118/1‑93 (MQ=255)
                                                  aacgaTGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCtt                                        >  1:4307628/1‑93 (MQ=255)
                                                  aacgaTGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCtt                                        >  1:5129020/1‑93 (MQ=255)
                                                  aacgaTGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCtt                                        >  1:5337463/1‑93 (MQ=255)
                                                   acgaTGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTc                                       >  2:3753509/1‑93 (MQ=255)
                                                    cgaTGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTct                                      <  1:2906944/93‑1 (MQ=255)
                                                     gaTGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGTATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTctg                                     >  2:2989279/1‑93 (MQ=255)
                                                       tGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTctgct                                   <  2:5905429/93‑1 (MQ=255)
                                                       tGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTctgct                                   >  1:4071966/1‑93 (MQ=255)
                                                       tGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTctgct                                   <  1:1356940/93‑1 (MQ=255)
                                                       tGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTctgct                                   <  2:3358234/93‑1 (MQ=255)
                                                          cGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAGGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGAc                                <  2:705192/93‑1 (MQ=255)
                                                          cGACTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGAc                                <  1:1195216/93‑1 (MQ=255)
                                                            aCTTTATCTCCCGCGACATAAAAAACG‑CCGCCAGGACGGCTAAAGAAATTCCCTTCGGCAGAAGCGAGACCTAACGCCACCTTCCGCTGACCg                              >  2:2257895/1‑93 (MQ=255)
                                                             cTTTATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGt                             >  2:6389301/1‑93 (MQ=255)
                                                              tttATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGtt                            >  2:1669025/1‑93 (MQ=255)
                                                              tttATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGtt                            >  2:5291266/1‑93 (MQ=255)
                                                               ttATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGttt                           >  1:6673267/1‑93 (MQ=255)
                                                                tATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGtttt                          <  2:1476310/93‑1 (MQ=255)
                                                                tATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGtttt                          <  2:5642263/93‑1 (MQ=255)
                                                                tATCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGtttt                          >  2:5422920/1‑93 (MQ=255)
                                                                 aTCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTc                         <  1:3565781/93‑1 (MQ=255)
                                                                 aTCTCCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTc                         >  2:4423222/1‑93 (MQ=255)
                                                                   ctcCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGa                       >  1:2500287/1‑93 (MQ=255)
                                                                   cccccGCGACATAAAGCCCG‑CCGCCAGGGCGGATAAAGAAATTCCCTTCACCTGACGCGAGATTTACCGCCACCTTCGGCTAACCGTTTTCGa                       <  2:4342720/91‑1 (MQ=255)
                                                                    tcCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGAt                      <  1:1115662/93‑1 (MQ=255)
                                                                    tcCCGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGAt                      <  1:1899067/93‑1 (MQ=255)
                                                                    ccccGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATGCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGAt                      <  1:4433941/92‑1 (MQ=255)
                                                                     cccGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATg                     <  1:2749652/93‑1 (MQ=255)
                                                                      ccGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGt                    <  2:2070741/93‑1 (MQ=255)
                                                                      ccGCGACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGt                    <  1:493714/93‑1 (MQ=255)
                                                                       cgcgACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTa                   <  2:4549580/93‑1 (MQ=255)
                                                                        gcgACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTAc                  <  1:1735462/93‑1 (MQ=255)
                                                                        gcgACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTAc                  <  1:6895517/93‑1 (MQ=255)
                                                                          gACATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACaa                >  1:2602610/1‑93 (MQ=255)
                                                                            cATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAAc              >  2:4617844/1‑93 (MQ=255)
                                                                            cATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAAc              <  2:1981746/93‑1 (MQ=255)
                                                                            cATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAAc              >  2:6686824/1‑93 (MQ=255)
                                                                            cATAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAAc              <  1:449192/93‑1 (MQ=255)
                                                                             aTAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAAcc             >  2:1060423/1‑93 (MQ=255)
                                                                              tAAAACACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCg            >  1:4181192/1‑93 (MQ=255)
                                                                               aaaaCACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCGCCTTCTGCTGACCGTTTTCGATGTACAAACCGa           <  1:2162990/93‑1 (MQ=255)
                                                                                aaaCCCG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGCCCGTTTTCGATGTACAAACCGAg          <  2:429981/93‑1 (MQ=255)
                                                                                aaaCACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAg          >  1:4561219/1‑93 (MQ=255)
                                                                                 aaCACG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAATCTAgc         >  2:684071/1‑93 (MQ=255)
                                                                                  acacG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAgcg        >  2:5748165/1‑93 (MQ=255)
                                                                                    acG‑CCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAgcggc      >  1:5781050/1‑93 (MQ=255)
                                                                                      g‑ccgccAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGgcgc    <  1:6603993/93‑1 (MQ=255)
                                                                                      g‑ccgccAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGgcgc    <  2:2052989/93‑1 (MQ=255)
                                                                                      g‑ccgccAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGgcgc    >  2:1497094/1‑93 (MQ=255)
                                                                                        ccgccAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCa   >  1:2096141/1‑93 (MQ=255)
                                                                                        ccgccAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCa   >  2:7724550/1‑93 (MQ=255)
                                                                                         cgccAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCAt  <  2:5039347/93‑1 (MQ=255)
                                                                                              |                                                                                       
GACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACG‑CCGCCA‑GACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCAT  >  NC_000913/3998197‑3998376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 226 total aligned reads displayed.
GACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCA‑GACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATAGCTTTC  >  NC_000913/3998197‑3998383
                                                                                              |                                                                                             
GACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTGTCTCCCGCGACATAAAACACGCCGCCA‑G                                                                                               <  SRR4302543.5589093/94‑1 (MQ=60)
GACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCA‑G                                                                                               <  SRR4302543.2661657/94‑1 (MQ=60)
GACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCA‑G                                                                                               >  SRR4302543.1802357/1‑94 (MQ=60)
GACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCA‑G                                                                                               <  SRR4302543.4344538/94‑1 (MQ=60)
 ACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCA‑GG                                                                                              >  SRR4302543.4165194/1‑94 (MQ=60)
 ACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCA‑GG                                                                                              >  SRR4302543.6993277/1‑94 (MQ=60)
 ACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCA‑GG                                                                                              <  SRR4302543.4482727/94‑1 (MQ=60)
 ACTGCACCGCAAACTGAATCTCTTTACTGGTCTTGAAGGCATCCAGACGAACGATGCCGCATTTATCTCCCGCGACATAAAACACGCCGCCA‑GG                                                                                              <  SRR4302543.5542569/94‑1 (MQ=60)
  CTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCA‑Gga                                                                                             >  SRR4302543.6504926/1‑92 (MQ=60)
  CTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCA‑Gga                                                                                             >  SRR4302543.4821873/1‑92 (MQ=60)
    GCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACG                                                                                            <  SRR4302543.7579338/94‑1 (MQ=60)
     CACCGCAAACTGAATCTCTTTACTGGGTTTGAAGGCATCCAGACGAACGATGCCGACCTTATCTCCCGCGACATAAAACACGCCGCCAGGACGG                                                                                           >  SRR4302543.6059695/1‑94 (MQ=60)
     CACCGCAAACTGAATCTATTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGG                                                                                           >  SRR4302543.2882405/1‑94 (MQ=60)
      ACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGA                                                                                          >  SRR4302543.6203216/1‑94 (MQ=60)
      ACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGA                                                                                          >  SRR4302543.7587969/1‑94 (MQ=60)
       CCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGAT                                                                                         <  SRR4302543.3507929/94‑1 (MQ=60)
       CCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGAT                                                                                         <  SRR4302543.6459139/94‑1 (MQ=60)
       CCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGAT                                                                                         <  SRR4302543.402731/94‑1 (MQ=60)
       CCGCAAACTCAATCTCTTTACTGGTTTTGAAGCCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGAT                                                                                         <  SRR4302543.3507930/94‑1 (MQ=60)
        CGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATA                                                                                        >  SRR4302543.3576385/1‑94 (MQ=60)
         CCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAA                                                                                       <  SRR4302543.1773258/94‑1 (MQ=60)
          CAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAA                                                                                      <  SRR4302543.4300550/94‑1 (MQ=60)
          CAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAA                                                                                      >  SRR4302543.7907251/1‑94 (MQ=60)
           AAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAG                                                                                     <  SRR4302543.3064262/94‑1 (MQ=60)
            AACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGA                                                                                    >  SRR4302543.6759331/1‑94 (MQ=60)
            AACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGA                                                                                    <  SRR4302543.2631515/94‑1 (MQ=60)
             ACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAA                                                                                   <  SRR4302543.7387076/94‑1 (MQ=60)
             ACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAA                                                                                   >  SRR4302543.4319635/1‑94 (MQ=60)
             ACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAA                                                                                   <  SRR4302543.6997068/94‑1 (MQ=60)
              CTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAA                                                                                  >  SRR4302543.404357/1‑94 (MQ=60)
              CTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAA                                                                                  <  SRR4302543.6568459/94‑1 (MQ=60)
              CTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAA                                                                                  >  SRR4302543.4397424/1‑94 (MQ=60)
                GAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATT                                                                                >  SRR4302543.479177/1‑94 (MQ=60)
                 AATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTC                                                                               >  SRR4302543.7311001/1‑94 (MQ=60)
                  ATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCC                                                                              >  SRR4302543.1480556/1‑94 (MQ=60)
                   TCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCC                                                                             <  SRR4302543.406600/94‑1 (MQ=60)
                   TCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCC                                                                             <  SRR4302543.1027536/94‑1 (MQ=60)
                   TCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCC                                                                             <  SRR4302543.1147124/94‑1 (MQ=60)
                    CTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCT                                                                            <  SRR4302543.1510719/94‑1 (MQ=60)
                     TCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTT                                                                           >  SRR4302543.2709263/1‑94 (MQ=60)
                      CTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTC                                                                          >  SRR4302543.1786361/1‑94 (MQ=60)
                      CTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTC                                                                          >  SRR4302543.1433595/1‑94 (MQ=60)
                      CTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTC                                                                          <  SRR4302543.6780185/94‑1 (MQ=60)
                      CTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTC                                                                          >  SRR4302543.5288288/1‑94 (MQ=60)
                      CTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTC                                                                          >  SRR4302543.5459082/1‑94 (MQ=60)
                      CTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTC                                                                          >  SRR4302543.3857486/1‑94 (MQ=60)
                      CTTGACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTC                                                                          <  SRR4302543.3767741/94‑1 (MQ=60)
                       TTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCTCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCA                                                                         >  SRR4302543.3791505/1‑94 (MQ=60)
                       TTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCA                                                                         >  SRR4302543.3791506/1‑94 (MQ=60)
                       TTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCA                                                                         <  SRR4302543.7613247/94‑1 (MQ=60)
                        TTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCAC                                                                        >  SRR4302543.4842915/1‑94 (MQ=60)
                        TTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCAC                                                                        >  SRR4302543.4842914/1‑94 (MQ=60)
                        TTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCAC                                                                        <  SRR4302543.6280206/94‑1 (MQ=60)
                         TACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACC                                                                       >  SRR4302543.5792865/1‑94 (MQ=60)
                         TACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACC                                                                       <  SRR4302543.2284340/94‑1 (MQ=60)
                          ACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCT                                                                      <  SRR4302543.2977415/94‑1 (MQ=60)
                          ACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCT                                                                      >  SRR4302543.6075603/1‑94 (MQ=60)
                          ACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCACCAGGCCGGATAAAGAAATTCCCTTCACCT                                                                      >  SRR4302543.1667605/1‑94 (MQ=60)
                          ACTGGTATTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCT                                                                      <  SRR4302543.390514/94‑1 (MQ=60)
                           CTGGTTTTGAAGGCATCCAGACGAACGATGCCTACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTG                                                                     <  SRR4302543.2144578/94‑1 (MQ=60)
                           CTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTG                                                                     <  SRR4302543.5085403/94‑1 (MQ=60)
                           CTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTG                                                                     >  SRR4302543.1276581/1‑94 (MQ=60)
                           CTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTG                                                                     <  SRR4302543.6727535/94‑1 (MQ=60)
                           CTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTG                                                                     <  SRR4302543.5886607/94‑1 (MQ=60)
                           CTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTG                                                                     <  SRR4302543.4596091/94‑1 (MQ=60)
                            TGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGA                                                                    <  SRR4302543.3201346/94‑1 (MQ=60)
                             GGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAA                                                                   >  SRR4302543.6860272/1‑94 (MQ=60)
                              GTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAG                                                                  <  SRR4302543.466178/94‑1 (MQ=60)
                              GTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAG                                                                  <  SRR4302543.7798717/94‑1 (MQ=60)
                              GTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAG                                                                  <  SRR4302543.2118952/94‑1 (MQ=60)
                               tttttaaaggaatcaagaggaacatggccaacttaaccccccccgcctaaaacccgcccgcagGACGGATAAAGAAATTCCCTTCACCTGAAGC                                                                 <  SRR4302543.5586786/31‑1 (MQ=60)
                               ttgcgcgcccacccacacaacggcgccctttttttcCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGC                                                                 <  SRR4302543.3033241/58‑1 (MQ=60)
                                TTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCG                                                                >  SRR4302543.7211286/1‑94 (MQ=60)
                                  TGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAG                                                              >  SRR4302543.5114649/1‑94 (MQ=60)
                                  TGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAG                                                              <  SRR4302543.5210805/94‑1 (MQ=60)
                                  TGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAG                                                              <  SRR4302543.4662811/94‑1 (MQ=60)
                                  TGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAG                                                              >  SRR4302543.6961030/1‑94 (MQ=60)
                                  TGAAGGCATCCAACCCAACGATGCCGACTTTATCTCCCGCGACATAAAACACGACGCTAGGACGGATAACGAAATTCCCTTCACCTGAAGCGAG                                                              <  SRR4302543.4662812/94‑1 (MQ=60)
                                   GAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGA                                                             >  SRR4302543.7003535/1‑94 (MQ=60)
                                      GGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTT                                                          <  SRR4302543.2852494/94‑1 (MQ=60)
                                       GCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTA                                                         <  SRR4302543.5328956/94‑1 (MQ=60)
                                        CATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAC                                                        >  SRR4302543.3304335/1‑94 (MQ=60)
                                        CATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAA                                                        <  SRR4302543.660748/94‑1 (MQ=60)
                                         ATCCAGACGAACGATTCCGACTTTAGCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAC                                                       <  SRR4302543.587740/94‑1 (MQ=60)
                                         ATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAC                                                       >  SRR4302543.5013233/1‑94 (MQ=60)
                                         ATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAC                                                       >  SRR4302543.7395785/1‑94 (MQ=60)
                                         ATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAC                                                       >  SRR4302543.4861938/1‑94 (MQ=60)
                                         ATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAC                                                       >  SRR4302543.7481500/1‑94 (MQ=60)
                                         ATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAC                                                       >  SRR4302543.905142/1‑94 (MQ=60)
                                         ATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAC                                                       >  SRR4302543.183195/1‑94 (MQ=60)
                                         ATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAC                                                       <  SRR4302543.3136674/94‑1 (MQ=60)
                                         ATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAC                                                       >  SRR4302543.2079290/1‑94 (MQ=60)
                                         ATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAC                                                       >  SRR4302543.2312980/1‑94 (MQ=60)
                                          TCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACG                                                      <  SRR4302543.2985861/94‑1 (MQ=60)
                                          TCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACG                                                      >  SRR4302543.2480319/1‑94 (MQ=60)
                                          TCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACG                                                      <  SRR4302543.5955120/94‑1 (MQ=60)
                                          TCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACG                                                      <  SRR4302543.4418082/94‑1 (MQ=60)
                                           CCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGC                                                     <  SRR4302543.3035643/94‑1 (MQ=60)
                                           CCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGC                                                     >  SRR4302543.1165258/1‑94 (MQ=60)
                                           CCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGC                                                     >  SRR4302543.574010/1‑94 (MQ=60)
                                           CCAGACGAACGATGCCGACTTTATCTCCCGCGACAGAAAACACGCCGCCAGGACGGATAAAGAAATGCCCTTCACCTGAAGCGAGAgagaacgc                                                     >  SRR4302543.7060296/1‑86 (MQ=60)
                                            CAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCC                                                    >  SRR4302543.2904623/1‑94 (MQ=60)
                                             AGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCA                                                   >  SRR4302543.5330101/1‑94 (MQ=60)
                                             AGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCA                                                   >  SRR4302543.1074144/1‑94 (MQ=60)
                                             AGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCA                                                   >  SRR4302543.5330102/1‑94 (MQ=60)
                                              GACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCAC                                                  >  SRR4302543.6578440/1‑94 (MQ=60)
                                               ACGAACGATGCCGACTTTATCTCCCGCGACATCAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACC                                                 >  SRR4302543.6317551/1‑94 (MQ=60)
                                               ACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACC                                                 >  SRR4302543.6317552/1‑94 (MQ=60)
                                                CGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCT                                                >  SRR4302543.2936758/1‑94 (MQ=60)
                                                 GAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTT                                               >  SRR4302543.5385738/1‑94 (MQ=60)
                                                 GAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTT                                               >  SRR4302543.5134290/1‑94 (MQ=60)
                                                 GAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTT                                               >  SRR4302543.5175377/1‑94 (MQ=60)
                                                 GAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTT                                               <  SRR4302543.6849132/94‑1 (MQ=60)
                                                 GAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTT                                               <  SRR4302543.6687823/94‑1 (MQ=60)
                                                 GAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTT                                               >  SRR4302543.4346760/1‑94 (MQ=60)
                                                 GAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTT                                               >  SRR4302543.3220894/1‑94 (MQ=60)
                                                  AACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTC                                              <  SRR4302543.5654831/94‑1 (MQ=60)
                                                  AACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTC                                              <  SRR4302543.5845241/94‑1 (MQ=60)
                                                   ACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCT                                             <  SRR4302543.2498332/94‑1 (MQ=60)
                                                    CGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTG                                            >  SRR4302543.4862939/1‑94 (MQ=60)
                                                    CGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTG                                            <  SRR4302543.2933373/94‑1 (MQ=60)
                                                     GATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGC                                           >  SRR4302543.196122/1‑94 (MQ=60)
                                                     GATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGC                                           <  SRR4302543.3764063/94‑1 (MQ=60)
                                                      ATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCT                                          >  SRR4302543.4108444/1‑94 (MQ=60)
                                                       TGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTG                                         <  SRR4302543.1369080/94‑1 (MQ=60)
                                                        GCCGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAAGGCCACCTTCTGCTGA                                        >  SRR4302543.1853071/1‑94 (MQ=60)
                                                          CGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACC                                      >  SRR4302543.6239560/1‑94 (MQ=60)
                                                          CGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACC                                      >  SRR4302543.1731687/1‑94 (MQ=60)
                                                          CGACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACC                                      >  SRR4302543.7891394/1‑94 (MQ=60)
                                                           GACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCG                                     >  SRR4302543.1100621/1‑94 (MQ=60)
                                                            ACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGT                                    >  SRR4302543.4124720/1‑94 (MQ=60)
                                                            ACTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCAACTGAAGCGAGATTTAACGCCACCTTCTGCTGACAGT                                    >  SRR4302543.2466944/1‑94 (MQ=60)
                                                             CTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTT                                   <  SRR4302543.5231806/94‑1 (MQ=60)
                                                             CTTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTT                                   >  SRR4302543.6944397/1‑94 (MQ=60)
                                                              TTTATCTCCCGCGACATGAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTT                                  <  SRR4302543.7099913/94‑1 (MQ=60)
                                                              TTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTT                                  >  SRR4302543.3454004/1‑94 (MQ=60)
                                                              TTTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTT                                  >  SRR4302543.4957263/1‑94 (MQ=60)
                                                               TTATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTT                                 >  SRR4302543.55254/1‑94 (MQ=60)
                                                                 CTCTCCCGCGACATACAGCACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCG                               <  SRR4302543.7962962/94‑1 (MQ=60)
                                                                 ATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCG                               >  SRR4302543.6469223/1‑94 (MQ=60)
                                                                 ATCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCG                               <  SRR4302543.3597330/94‑1 (MQ=60)
                                                                  TCTCCCGCGACATAACACACGCCGCCAGGACGGATAAAGAAATTCCCTTACCCTGAATCGAGATTTAAGGCCACCTTCTGCTGACCGTTTTCGA                              >  SRR4302543.2522978/1‑94 (MQ=60)
                                                                  TCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGA                              >  SRR4302543.1331122/1‑94 (MQ=60)
                                                                  TCTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGA                              >  SRR4302543.2522979/1‑94 (MQ=60)
                                                                   CTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGAT                             <  SRR4302543.5730194/94‑1 (MQ=60)
                                                                   CTCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGAT                             >  SRR4302543.4551527/1‑94 (MQ=60)
                                                                    TCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATG                            <  SRR4302543.4474099/94‑1 (MQ=60)
                                                                    TCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATG                            <  SRR4302543.1125763/94‑1 (MQ=60)
                                                                    TCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATG                            <  SRR4302543.5124632/94‑1 (MQ=60)
                                                                    TCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATG                            <  SRR4302543.1916155/94‑1 (MQ=60)
                                                                    TCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATG                            <  SRR4302543.6957817/94‑1 (MQ=60)
                                                                    TCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATG                            >  SRR4302543.1370318/1‑94 (MQ=60)
                                                                    CCCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATGCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATG                            <  SRR4302543.4474098/94‑1 (MQ=60)
                                                                     CCCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGT                           <  SRR4302543.2774659/94‑1 (MQ=60)
                                                                      CCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTA                          <  SRR4302543.498282/94‑1 (MQ=60)
                                                                      CCGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTA                          <  SRR4302543.2487207/94‑1 (MQ=60)
                                                                       CGCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTAC                         <  SRR4302543.4526076/94‑1 (MQ=60)
                                                                        GCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACA                        >  SRR4302543.3094355/1‑94 (MQ=60)
                                                                        GCGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACA                        <  SRR4302543.1750932/94‑1 (MQ=60)
                                                                         CGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAA                       >  SRR4302543.5162652/1‑94 (MQ=60)
                                                                         CGACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAA                       >  SRR4302543.2626249/1‑94 (MQ=60)
                                                                          GACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAA                      >  SRR4302543.4133471/1‑94 (MQ=60)
                                                                          GACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAA                      >  SRR4302543.3156922/1‑94 (MQ=60)
                                                                           ACATAAAACGCGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAAC                     <  SRR4302543.2562618/94‑1 (MQ=60)
                                                                           ACATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAAC                     >  SRR4302543.82716/1‑94 (MQ=60)
                                                                            CATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACC                    <  SRR4302543.2150834/94‑1 (MQ=60)
                                                                            CATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACC                    <  SRR4302543.453386/94‑1 (MQ=60)
                                                                             ATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCG                   >  SRR4302543.6881704/1‑94 (MQ=60)
                                                                             ATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCG                   >  SRR4302543.7118587/1‑94 (MQ=60)
                                                                             ATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCG                   <  SRR4302543.2429422/94‑1 (MQ=60)
                                                                             ATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCG                   >  SRR4302543.1872987/1‑94 (MQ=60)
                                                                             ATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCG                   >  SRR4302543.4219081/1‑94 (MQ=60)
                                                                             ATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCG                   >  SRR4302543.876738/1‑94 (MQ=60)
                                                                             ATAAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCG                   >  SRR4302543.356977/1‑94 (MQ=60)
                                                                               AAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCGCCTTCTGCTGACCGTTTTCGATGTACAAACCGAG                 <  SRR4302543.2182376/94‑1 (MQ=60)
                                                                               AAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAG                 <  SRR4302543.2182377/94‑1 (MQ=60)
                                                                               AAAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAG                 >  SRR4302543.4602733/1‑94 (MQ=60)
                                                                                AAACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGC                >  SRR4302543.1127670/1‑94 (MQ=60)
                                                                                 AACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCG               >  SRR4302543.2418780/1‑94 (MQ=60)
                                                                                 AACACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCG               <  SRR4302543.4788795/94‑1 (MQ=60)
                                                                                   CACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGC             >  SRR4302543.1262823/1‑94 (MQ=60)
                                                                                   CACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGC             >  SRR4302543.5833657/1‑94 (MQ=60)
                                                                                    ACGCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCG            >  SRR4302543.616361/1‑94 (MQ=60)
                                                                                      GCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCA          <  SRR4302543.6666233/94‑1 (MQ=60)
                                                                                      GCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCA          >  SRR4302543.3723744/1‑94 (MQ=60)
                                                                                      GCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCA          <  SRR4302543.2113834/94‑1 (MQ=60)
                                                                                      GCCGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCA          >  SRR4302543.6702354/1‑94 (MQ=60)
                                                                                        CGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATA        >  SRR4302543.115909/1‑94 (MQ=60)
                                                                                        CGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATA        >  SRR4302543.7627330/1‑94 (MQ=60)
                                                                                        CGCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATA        >  SRR4302543.1892877/1‑94 (MQ=60)
                                                                                         GCCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATAG       <  SRR4302543.4169896/94‑1 (MQ=60)
                                                                                          CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGCTGTACAACACGAGCGGCGCATAGC      >  SRR4302543.1622196/1‑94 (MQ=60)
                                                                                          CCAGGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATAGC      >  SRR4302543.3101655/1‑94 (MQ=60)
                                                                                           cagGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATAGCT     <  SRR4302543.296156/91‑1 (MQ=60)
                                                                                           cagGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATAGCT     <  SRR4302543.5685929/91‑1 (MQ=60)
                                                                                           cagGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATAGCT     >  SRR4302543.573947/4‑94 (MQ=60)
                                                                                           cagGACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATAGCT     >  SRR4302543.3417440/4‑94 (MQ=60)
                                                                                            G‑GACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATAGCTTT   <  SRR4302543.3112872/94‑1 (MQ=60)
                                                                                            G‑GACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATAGCTTT   >  SRR4302543.2253491/1‑94 (MQ=60)
                                                                                              GACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATAGCTTTC  >  SRR4302543.2897114/1‑94 (MQ=60)
                                                                                              |                                                                                             
GACTGCACCGCAAACTGAATCTCTTTACTGGTTTTGAAGGCATCCAGACGAACGATGCCGACTTTATCTCCCGCGACATAAAACACGCCGCCA‑GACGGATAAAGAAATTCCCTTCACCTGAAGCGAGATTTAACGCCACCTTCTGCTGACCGTTTTCGATGTACAAACCGAGCGGCGCATAGCTTTC  >  NC_000913/3998197‑3998383

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑