Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,006,407 C→T G19E (GGA→GAA)  yigK ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,006,4070CT100.0% 1216.7 / NA 336G19E (GGA→GAA) yigKhypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (185/151);  total (185/151)

Only 100 of 352 total aligned reads displayed.

AAAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCAACCCCACGCCA  >  NC_000913/4006317‑4006495
                                                                                          |                                                                                         
aaaaCTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTtcc                                                                                         >  2:7398933/1‑93 (MQ=255)
 aaaCTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCa                                                                                        <  1:393055/93‑1 (MQ=255)
  aaCTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGAGGCGCGCCACTGCTGGATTTCCAg                                                                                       >  2:7889071/1‑93 (MQ=255)
     tGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCa                                                                                    <  1:7107267/93‑1 (MQ=255)
     tGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCa                                                                                    >  1:2775514/1‑93 (MQ=255)
       cgcgcTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCaaa                                                                                  <  1:2673658/93‑1 (MQ=255)
        gcgcTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAAt                                                                                 >  1:1667186/1‑93 (MQ=255)
        gcgcTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAAt                                                                                 >  1:5327422/1‑93 (MQ=255)
           cTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCaa                                                                              <  1:1281857/93‑1 (MQ=255)
            tGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAg                                                                             >  2:1007536/1‑93 (MQ=255)
             ggAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGt                                                                            <  1:7494295/93‑1 (MQ=255)
             ggAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGt                                                                            >  1:5574390/1‑93 (MQ=255)
             ggAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGt                                                                            >  2:5965103/1‑93 (MQ=255)
              gAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTa                                                                           <  1:387575/93‑1 (MQ=255)
               aaCAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTaa                                                                          <  1:7005125/93‑1 (MQ=255)
               aaCAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTaa                                                                          >  2:4196861/1‑93 (MQ=255)
               aaCAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTaa                                                                          <  2:3435750/93‑1 (MQ=255)
                  aaaTGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGcc                                                                       >  1:6343974/1‑93 (MQ=255)
                  aaaTGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGcc                                                                       >  2:1705162/1‑93 (MQ=255)
                  aaaTGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGcc                                                                       <  2:2039531/93‑1 (MQ=255)
                   aaTGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCcg                                                                      >  1:6803530/1‑93 (MQ=255)
                    aTGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCcgc                                                                     >  2:6071551/1‑93 (MQ=255)
                     tGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCcgcg                                                                    >  1:2350535/1‑93 (MQ=255)
                         gACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCCCCtc                                                                >  1:1915537/1‑92 (MQ=255)
                          aCGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCCGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGc                                                               >  1:5417919/1‑93 (MQ=255)
                           cgcgATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGcc                                                              >  2:1739845/1‑93 (MQ=255)
                             cgATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCca                                                            <  2:7626812/93‑1 (MQ=255)
                              gATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcac                                                           >  1:3057584/1‑93 (MQ=255)
                              gATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcac                                                           >  1:1567085/1‑93 (MQ=255)
                              gATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcac                                                           >  2:451202/1‑93 (MQ=255)
                               aTTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcact                                                          >  1:4506938/1‑93 (MQ=255)
                                ttGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTACGCCGCGCCTGCCcactt                                                         >  2:251536/1‑93 (MQ=255)
                                ttGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcactt                                                         <  1:7686904/93‑1 (MQ=255)
                                ttGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcactt                                                         >  1:6394416/1‑93 (MQ=255)
                                 tGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttc                                                        <  1:1765557/93‑1 (MQ=255)
                                 tGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttc                                                        <  1:6490040/93‑1 (MQ=255)
                                    gTAGAGTCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGCTATTCAGCCAAATCAAGCAAGCCGCGCCTGCGcacttcaac                                                     >  2:772697/1‑93 (MQ=255)
                                    gTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttcaac                                                     >  2:2545032/1‑93 (MQ=255)
                                     tAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttcaaca                                                    >  2:2920979/1‑93 (MQ=255)
                                      agagGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttcaacac                                                   <  2:6399480/93‑1 (MQ=255)
                                       gagGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttcaacact                                                  >  1:7837022/1‑93 (MQ=255)
                                       gagGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttcaacact                                                  >  2:7150149/1‑93 (MQ=255)
                                       gagGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttcaacact                                                  >  1:4682595/1‑93 (MQ=255)
                                          gCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttcaacacttca                                               <  2:1892605/93‑1 (MQ=255)
                                          gCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttcaacacttca                                               <  2:1146241/93‑1 (MQ=255)
                                           ccAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttcaacacttcaa                                              >  2:4454954/1‑93 (MQ=255)
                                           ccAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttcaacacttcaa                                              >  2:2441077/1‑93 (MQ=255)
                                            cAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGGGCCTGCCCACTTCAACACTTCaaa                                             >  2:3137410/1‑93 (MQ=255)
                                            cAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCaaa                                             <  1:7364581/93‑1 (MQ=255)
                                            cAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCaaa                                             <  1:206835/93‑1 (MQ=255)
                                            cAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCaaa                                             <  2:6150189/93‑1 (MQ=255)
                                             aGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCCAAc                                            >  2:545733/1‑93 (MQ=255)
                                             aGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAAc                                            >  1:570665/1‑93 (MQ=255)
                                              gCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACg                                           >  1:84258/1‑93 (MQ=255)
                                              gCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACg                                           >  2:4748693/1‑93 (MQ=255)
                                                 aTTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCaa                                        >  2:4644056/1‑93 (MQ=255)
                                                 aTTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCaa                                        <  1:2487126/93‑1 (MQ=255)
                                                  tttAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAAt                                       <  2:6290807/93‑1 (MQ=255)
                                                  tttAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAAt                                       <  2:6967408/93‑1 (MQ=255)
                                                   ttAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATc                                      >  1:5614050/1‑93 (MQ=255)
                                                   ttAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATc                                      <  1:6581962/93‑1 (MQ=255)
                                                    tAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCa                                     >  1:2154308/1‑93 (MQ=255)
                                                     aaGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCAc                                    >  2:325567/1‑93 (MQ=255)
                                                      aGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACt                                   >  2:6630021/1‑93 (MQ=255)
                                                       ggTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTg                                  >  2:1273255/1‑93 (MQ=255)
                                                        gTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGa                                 >  1:1115110/1‑93 (MQ=255)
                                                        gTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAAAAAAGTAAGCCGCGCATGCCCACTTCAACACAACAAACGCAATCACTGa                                 <  2:7246176/93‑1 (MQ=255)
                                                          cAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGc                               <  2:1492812/93‑1 (MQ=255)
                                                           aaTTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCg                              <  1:2875165/93‑1 (MQ=255)
                                                           aaTTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCg                              <  1:2323164/93‑1 (MQ=255)
                                                           aaTTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCACGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCg                              >  2:4594505/1‑93 (MQ=255)
                                                            aTTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCgg                             <  2:6369598/93‑1 (MQ=255)
                                                                 aCCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGaaaa                        >  2:3714803/1‑93 (MQ=255)
                                                                 aCCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGaaaa                        <  1:5069246/93‑1 (MQ=255)
                                                                  ccAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAATCGCAATCACTGAGCGGGAAAAt                       <  2:4981942/93‑1 (MQ=255)
                                                                  ccAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAAt                       <  2:3938298/93‑1 (MQ=255)
                                                                  ccAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAAt                       <  1:1007536/93‑1 (MQ=255)
                                                                   cAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATa                      <  1:6048833/93‑1 (MQ=255)
                                                                    aGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAg                     <  1:4125683/93‑1 (MQ=255)
                                                                     gcggcgCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGc                    <  2:7447116/93‑1 (MQ=255)
                                                                     gcggcgCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGc                    >  2:6766087/1‑93 (MQ=255)
                                                                        gcgcgcCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTc                <  1:2993881/93‑1 (MQ=255)
                                                                         cgcgcCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTcc               >  2:5660804/1‑93 (MQ=255)
                                                                          gcgcCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTccc              >  2:5053397/1‑93 (MQ=255)
                                                                           cgcCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTcccc             >  2:5549631/1‑92 (MQ=255)
                                                                            gcCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTcccca            >  1:6214310/1‑91 (MQ=255)
                                                                              cACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTccccaac          <  2:18422/93‑5 (MQ=255)
                                                                              cACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTccccaac          >  1:5920877/1‑89 (MQ=255)
                                                                                ctgctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAaccc        >  2:2798389/1‑93 (MQ=255)
                                                                                ctgctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAaccc        >  1:4257073/1‑93 (MQ=255)
                                                                                ctgctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAaccc        <  2:4069213/93‑1 (MQ=255)
                                                                                 tgctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAAcccc        >  2:3005261/1‑93 (MQ=255)
                                                                                  gctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCa       >  1:3742430/1‑93 (MQ=255)
                                                                                   ctgGATTTCCAGCCAAATCAAGTAAGGCACGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCag      >  2:2952040/1‑92 (MQ=255)
                                                                                   ctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCAc      <  1:4899381/93‑1 (MQ=255)
                                                                                    tgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCAcc     >  1:334900/1‑92 (MQ=255)
                                                                                    tgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGAGTCCCCAAACCCACg     >  1:1336254/1‑93 (MQ=255)
                                                                                      gATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGcc   <  2:2335422/93‑1 (MQ=255)
                                                                                      gATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGcc   >  1:5981236/1‑93 (MQ=255)
                                                                                       aTTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCa  >  2:3558465/1‑93 (MQ=255)
                                                                                          |                                                                                         
AAAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCAACCCCACGCCA  >  NC_000913/4006317‑4006495

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ACAAAAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCAACCCCACGCCAACCA  >  NC_000913/4006314‑4006499
                                                                                             |                                                                                              
ACAAAAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTTCTGGATTT                                                                                                >  SRR4302543.5602826/1‑94 (MQ=60)
ACAAAAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTT                                                                                                >  SRR4302543.153356/1‑94 (MQ=60)
 CAAAAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTC                                                                                               >  SRR4302543.7382978/1‑94 (MQ=60)
 CAAAAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTC                                                                                               >  SRR4302543.268381/1‑94 (MQ=60)
 CAAAAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTC                                                                                               >  SRR4302543.2076809/1‑94 (MQ=60)
 CAAAAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTC                                                                                               >  SRR4302543.1959280/1‑94 (MQ=60)
  AAAAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCC                                                                                              >  SRR4302543.7412128/1‑94 (MQ=60)
  AAAAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCC                                                                                              >  SRR4302543.5854179/1‑94 (MQ=60)
  AAAAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCC                                                                                              >  SRR4302543.4243404/1‑94 (MQ=60)
   AAAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCA                                                                                             <  SRR4302543.4629678/94‑1 (MQ=60)
    AAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAG                                                                                            <  SRR4302543.396682/94‑1 (MQ=60)
    AAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAG                                                                                            <  SRR4302543.2883611/94‑1 (MQ=60)
    AAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAG                                                                                            >  SRR4302543.2111659/1‑94 (MQ=60)
     AACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGC                                                                                           <  SRR4302543.932903/94‑1 (MQ=60)
     AACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGC                                                                                           >  SRR4302543.3053356/1‑94 (MQ=60)
       CTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCA                                                                                         >  SRR4302543.2800786/1‑94 (MQ=60)
       CTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCACGCCACTGCTGGATTTCCAGCCA                                                                                         >  SRR4302543.108750/1‑94 (MQ=60)
        TGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAA                                                                                        <  SRR4302543.7176309/94‑1 (MQ=60)
          CGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAAT                                                                                      <  SRR4302543.2697897/94‑1 (MQ=60)
          CGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAAT                                                                                      >  SRR4302543.1682117/1‑94 (MQ=60)
          CGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAAT                                                                                      <  SRR4302543.1306726/94‑1 (MQ=60)
          CGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAAT                                                                                      <  SRR4302543.1807510/94‑1 (MQ=60)
          CGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAAT                                                                                      >  SRR4302543.5375591/1‑94 (MQ=60)
           GCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATC                                                                                     <  SRR4302543.7626433/94‑1 (MQ=60)
            CGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCA                                                                                    >  SRR4302543.128839/1‑94 (MQ=60)
            CGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCA                                                                                    <  SRR4302543.4141461/94‑1 (MQ=60)
            CGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCA                                                                                    >  SRR4302543.6422067/1‑94 (MQ=60)
            CGCTGGAACAAAGTTCGACGCGATTGAGTAGATGCCAGCGATTTAAGGTCAATTTCTCCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCA                                                                                    <  SRR4302543.3721813/94‑1 (MQ=60)
              CTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAG                                                                                  <  SRR4302543.5630936/94‑1 (MQ=60)
              CTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAG                                                                                  <  SRR4302543.1293289/94‑1 (MQ=60)
              CTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAG                                                                                  <  SRR4302543.6519110/94‑1 (MQ=60)
               TGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGT                                                                                 >  SRR4302543.5625129/1‑94 (MQ=60)
                GGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTA                                                                                <  SRR4302543.7565980/94‑1 (MQ=60)
                GGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTA                                                                                >  SRR4302543.638192/1‑94 (MQ=60)
                 GAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAA                                                                               <  SRR4302543.391161/94‑1 (MQ=60)
                 GAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAA                                                                               >  SRR4302543.1320984/1‑94 (MQ=60)
                 GAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAA                                                                               >  SRR4302543.609841/1‑94 (MQ=60)
                  AACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAG                                                                              <  SRR4302543.7071690/94‑1 (MQ=60)
                  AACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAG                                                                              <  SRR4302543.6069385/94‑1 (MQ=60)
                   ACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGC                                                                             >  SRR4302543.4527542/1‑94 (MQ=60)
                   ACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGC                                                                             >  SRR4302543.575540/1‑94 (MQ=60)
                    CAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCC                                                                            <  SRR4302543.7909697/94‑1 (MQ=60)
                    CAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCC                                                                            >  SRR4302543.6403632/1‑94 (MQ=60)
                    CAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCC                                                                            <  SRR4302543.7709998/94‑1 (MQ=60)
                     AAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCG                                                                           >  SRR4302543.6867773/1‑94 (MQ=60)
                     AAATGGCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCG                                                                           <  SRR4302543.7167478/94‑1 (MQ=60)
                      AATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGC                                                                          >  SRR4302543.395025/1‑94 (MQ=60)
                       ATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCggcc                                                                         >  SRR4302543.6355244/1‑90 (MQ=60)
                       ATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCG                                                                         >  SRR4302543.2371850/1‑94 (MQ=60)
                       ATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCG                                                                         <  SRR4302543.7304880/94‑1 (MQ=60)
                       ATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCC                                                                         >  SRR4302543.564511/1‑94 (MQ=60)
                        TGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGC                                                                        >  SRR4302543.1519733/1‑94 (MQ=60)
                         GTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCC                                                                       <  SRR4302543.5057533/94‑1 (MQ=60)
                          TCGACGCTATAGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACAAGCGGAGAGCCACTGCTGGATTTCCAGCTAAATCAAGTAAGCCGCGCCT                                                                      <  SRR4302543.4788601/94‑1 (MQ=60)
                          TCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCT                                                                      <  SRR4302543.3894441/94‑1 (MQ=60)
                           CGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCccctc                                                                     >  SRR4302543.1932804/1‑89 (MQ=60)
                           CGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTG                                                                     >  SRR4302543.7514113/1‑94 (MQ=60)
                            GACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCCGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGC                                                                    >  SRR4302543.5467196/1‑94 (MQ=60)
                              CGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCC                                                                  <  SRR4302543.754230/94‑1 (MQ=60)
                                CGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCAC                                                                >  SRR4302543.2968909/1‑94 (MQ=60)
                                CGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCAC                                                                >  SRR4302543.1581082/1‑94 (MQ=60)
                                CGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCAC                                                                >  SRR4302543.3085104/1‑94 (MQ=60)
                                 GATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACT                                                               >  SRR4302543.923672/1‑94 (MQ=60)
                                 GATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACT                                                               >  SRR4302543.4547917/1‑94 (MQ=60)
                                 GATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACT                                                               >  SRR4302543.1977219/1‑94 (MQ=60)
                                 GATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACT                                                               >  SRR4302543.5623345/1‑94 (MQ=60)
                                  ATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTT                                                              >  SRR4302543.4408162/1‑94 (MQ=60)
                                  ATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTT                                                              >  SRR4302543.7930664/1‑94 (MQ=60)
                                  ATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTT                                                              >  SRR4302543.6454610/1‑94 (MQ=60)
                                  ATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTT                                                              >  SRR4302543.6454611/1‑94 (MQ=60)
                                   TTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTC                                                             <  SRR4302543.6229804/94‑1 (MQ=60)
                                   TTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTC                                                             <  SRR4302543.7759697/94‑1 (MQ=60)
                                   TTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTC                                                             >  SRR4302543.7953320/1‑94 (MQ=60)
                                    TGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCA                                                            <  SRR4302543.1781340/94‑1 (MQ=60)
                                    TGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCA                                                            <  SRR4302543.6551182/94‑1 (MQ=60)
                                     GAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAC                                                           >  SRR4302543.1754356/1‑94 (MQ=60)
                                     GAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAA                                                           <  SRR4302543.5631415/94‑1 (MQ=60)
                                     GAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAA                                                           >  SRR4302543.6662560/1‑94 (MQ=60)
                                      AGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAAC                                                          <  SRR4302543.7896117/94‑1 (MQ=60)
                                       GTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTACGCCGCGCCTGCCCACTTCAACA                                                         >  SRR4302543.2814372/1‑94 (MQ=60)
                                       GTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACA                                                         <  SRR4302543.5281745/94‑1 (MQ=60)
                                        TAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACAC                                                        <  SRR4302543.3320198/94‑1 (MQ=60)
                                        TAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTCCCCACTTCAACAC                                                        >  SRR4302543.5974810/1‑94 (MQ=60)
                                         AGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGTGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACT                                                       <  SRR4302543.6737963/94‑1 (MQ=60)
                                         AGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACT                                                       >  SRR4302543.7910786/1‑94 (MQ=60)
                                         AGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACT                                                       >  SRR4302543.4725297/1‑94 (MQ=60)
                                           AGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTC                                                     <  SRR4302543.7870361/94‑1 (MQ=60)
                                           AGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTC                                                     <  SRR4302543.3037941/94‑1 (MQ=60)
                                           AGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTC                                                     >  SRR4302543.5459681/1‑94 (MQ=60)
                                            GGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCA                                                    <  SRR4302543.3871511/94‑1 (MQ=60)
                                             GCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAA                                                   <  SRR4302543.3935004/94‑1 (MQ=60)
                                              CCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAA                                                  <  SRR4302543.3149861/94‑1 (MQ=60)
                                              CCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAA                                                  >  SRR4302543.6111435/1‑94 (MQ=60)
                                              CCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAA                                                  <  SRR4302543.205563/94‑1 (MQ=60)
                                               CAGCGATTTAAGGTCAATTGCACCAGCGGTGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAAC                                                 <  SRR4302543.1426326/94‑1 (MQ=60)
                                               CAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAAC                                                 >  SRR4302543.5457251/1‑94 (MQ=60)
                                               CAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAAC                                                 <  SRR4302543.7435397/94‑1 (MQ=60)
                                               CAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAAC                                                 <  SRR4302543.4897825/94‑1 (MQ=60)
                                               CAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAAC                                                 <  SRR4302543.208590/94‑1 (MQ=60)
                                               CAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAAC                                                 >  SRR4302543.2388941/1‑94 (MQ=60)
                                               CAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAAC                                                 >  SRR4302543.575887/1‑94 (MQ=60)
                                                AGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACG                                                >  SRR4302543.85035/1‑94 (MQ=60)
                                                 GCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGC                                               >  SRR4302543.2619110/1‑94 (MQ=60)
                                                  CGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCA                                              <  SRR4302543.3712743/94‑1 (MQ=60)
                                                   GATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAA                                             >  SRR4302543.4191162/1‑94 (MQ=60)
                                                   GATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAA                                             >  SRR4302543.1213885/1‑94 (MQ=60)
                                                   GATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAA                                             >  SRR4302543.2755316/1‑94 (MQ=60)
                                                    ATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAAT                                            <  SRR4302543.2509663/94‑1 (MQ=60)
                                                     tttaaggcacatgtccCCAGCGGCGCGCCACTGCTGGATTTCCAGCCAGATCAAGTAAGCCGCGCCTGCCCACTGCAACACCTCAAACGCAATC                                           <  SRR4302543.3897316/78‑1 (MQ=60)
                                                     TTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATC                                           >  SRR4302543.5665210/1‑94 (MQ=60)
                                                     TTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATC                                           <  SRR4302543.1602899/94‑1 (MQ=60)
                                                     TTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATC                                           <  SRR4302543.3897317/94‑1 (MQ=60)
                                                      TTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCA                                          >  SRR4302543.2173601/1‑94 (MQ=60)
                                                      TTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCA                                          <  SRR4302543.6643948/94‑1 (MQ=60)
                                                       TAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCAC                                         <  SRR4302543.4850858/94‑1 (MQ=60)
                                                       TAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCAC                                         >  SRR4302543.2413689/1‑94 (MQ=60)
                                                       TAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCAC                                         <  SRR4302543.2250334/94‑1 (MQ=60)
                                                        AAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACT                                        >  SRR4302543.88296/1‑94 (MQ=60)
                                                         AGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTG                                       >  SRR4302543.6006218/1‑94 (MQ=60)
                                                         AGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTG                                       >  SRR4302543.6926172/1‑94 (MQ=60)
                                                          GGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGA                                      >  SRR4302543.6609824/1‑94 (MQ=60)
                                                          GGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGA                                      >  SRR4302543.1125203/1‑94 (MQ=60)
                                                           GTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAG                                     >  SRR4302543.5890623/1‑94 (MQ=60)
                                                            TCAGTTGCCCCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGC                                    <  SRR4302543.6977689/94‑1 (MQ=60)
                                                            TCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGC                                    >  SRR4302543.17480/1‑94 (MQ=60)
                                                             CAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCCCTTCAACACTTCAAACGCAATCACTGAGCG                                   <  SRR4302543.2662731/94‑1 (MQ=60)
                                                             CAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCG                                   >  SRR4302543.2385078/1‑94 (MQ=60)
                                                             CAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGAG                                   >  SRR4302543.2930343/1‑94 (MQ=60)
                                                              AATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGG                                  <  SRR4302543.2344275/94‑1 (MQ=60)
                                                              AATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGG                                  <  SRR4302543.2901336/94‑1 (MQ=60)
                                                               ATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGG                                 <  SRR4302543.1217928/94‑1 (MQ=60)
                                                                TTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGA                                >  SRR4302543.4690582/1‑94 (MQ=60)
                                                                 TGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAA                               <  SRR4302543.3396942/94‑1 (MQ=60)
                                                                    ACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAAT                            <  SRR4302543.5115260/94‑1 (MQ=60)
                                                                    ACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAAT                            >  SRR4302543.198390/1‑94 (MQ=60)
                                                                    ACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAAT                            >  SRR4302543.2152552/1‑94 (MQ=60)
                                                                    ACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAAT                            <  SRR4302543.4069493/94‑1 (MQ=60)
                                                                    ACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAAT                            <  SRR4302543.4016209/94‑1 (MQ=60)
                                                                     CCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATA                           <  SRR4302543.1016449/94‑1 (MQ=60)
                                                                     CCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATA                           <  SRR4302543.325002/94‑1 (MQ=60)
                                                                      CAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG                          <  SRR4302543.6106088/94‑1 (MQ=60)
                                                                      CAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG                          <  SRR4302543.5412291/94‑1 (MQ=60)
                                                                       CGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGC                         <  SRR4302543.2773090/94‑1 (MQ=60)
                                                                       AGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGC                         >  SRR4302543.6046336/1‑94 (MQ=60)
                                                                       AGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGC                         <  SRR4302543.4162884/94‑1 (MQ=60)
                                                                       AGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGC                         >  SRR4302543.1122577/1‑94 (MQ=60)
                                                                         CGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT                      <  SRR4302543.1875874/94‑1 (MQ=60)
                                                                         CGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT                      <  SRR4302543.5165615/94‑1 (MQ=60)
                                                                          GGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTC                    <  SRR4302543.4320482/94‑1 (MQ=60)
                                                                           GCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC                   <  SRR4302543.3021053/94‑1 (MQ=60)
                                                                           GCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC                   <  SRR4302543.7455764/94‑1 (MQ=60)
                                                                              CGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCA                >  SRR4302543.6272976/1‑94 (MQ=60)
                                                                              CGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCA                >  SRR4302543.1608692/1‑94 (MQ=60)
                                                                               GCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCcaa               >  SRR4302543.6430764/1‑91 (MQ=60)
                                                                                CCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGTGCGGGATAATAGCGTCCCCAAC               >  SRR4302543.7086910/1‑94 (MQ=60)
                                                                                CCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAAC               >  SRR4302543.5974970/1‑94 (MQ=60)
                                                                                CCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAAC               <  SRR4302543.1474921/94‑1 (MQ=60)
                                                                                CCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAAC               >  SRR4302543.2309092/1‑94 (MQ=60)
                                                                                 CACTGCTGGATTTCCAGCCAAATCATGTAAGCCGCGCCTGCCCACTTCACCACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACC              >  SRR4302543.4511889/1‑94 (MQ=60)
                                                                                 CACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACC              >  SRR4302543.7586308/1‑94 (MQ=60)
                                                                                  ACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCC             >  SRR4302543.5992395/1‑94 (MQ=60)
                                                                                  ACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCC             >  SRR4302543.650970/1‑94 (MQ=60)
                                                                                  ACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCC             >  SRR4302543.4295724/1‑94 (MQ=60)
                                                                                   CTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCC            >  SRR4302543.5087013/1‑94 (MQ=60)
                                                                                    TGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCA           >  SRR4302543.6302342/1‑94 (MQ=60)
                                                                                    TGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCA           >  SRR4302543.3775350/1‑94 (MQ=60)
                                                                                    TGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCA           >  SRR4302543.2308777/1‑94 (MQ=60)
                                                                                    TGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCA           >  SRR4302543.6576242/1‑94 (MQ=60)
                                                                                     GCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCAC          >  SRR4302543.2946886/1‑94 (MQ=60)
                                                                                      TTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGGCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACG         <  SRR4302543.2722145/94‑1 (MQ=60)
                                                                                      GTGGATTTCCCGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACG         <  SRR4302543.2370852/94‑1 (MQ=60)
                                                                                      CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACG         <  SRR4302543.1726469/94‑1 (MQ=60)
                                                                                      CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACG         <  SRR4302543.2370851/94‑1 (MQ=60)
                                                                                      CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACG         <  SRR4302543.4944042/94‑1 (MQ=60)
                                                                                      CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACG         >  SRR4302543.5034901/1‑94 (MQ=60)
                                                                                      CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACG         >  SRR4302543.5689005/1‑94 (MQ=60)
                                                                                      CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACC         >  SRR4302543.337971/1‑94 (MQ=60)
                                                                                      CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCccacaccacc        >  SRR4302543.5689006/1‑84 (MQ=60)
                                                                                      CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGAGTCCCCAAACCCACG         >  SRR4302543.1348172/1‑94 (MQ=60)
                                                                                      CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCGGCCCACTTCAACACGTCAAACGCAATCACTGAGCGGGAAAATAGCGACCCCAACCCCACG         >  SRR4302543.7101036/1‑94 (MQ=60)
                                                                                       TGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGC        >  SRR4302543.6661001/1‑94 (MQ=60)
                                                                                       TGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGC        >  SRR4302543.4629860/1‑94 (MQ=60)
                                                                                        GGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCC       >  SRR4302543.6036039/1‑94 (MQ=60)
                                                                                          ATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAA     <  SRR4302543.5515799/94‑1 (MQ=60)
                                                                                             TCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCA  <  SRR4302543.3120868/94‑1 (MQ=60)
                                                                                             TCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCA  >  SRR4302543.5974711/1‑94 (MQ=60)
                                                                                             |                                                                                              
ACAAAAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCAACCCCACGCCAACCA  >  NC_000913/4006314‑4006499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: