Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,006,483 +C coding (183/207 nt) b4554 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,006,4801.C97.0% 923.9 / 17.5 303coding (186/207 nt)b4554hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (6/3);  new base C (154/140);  total (160/143)
Fisher's exact test for biased strand distribution p-value = 5.08e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

Only 100 of 329 total aligned reads displayed.

GGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑T‑CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGG  >  NC_000913/4006388‑4006567
                                                                                              |                                                                                       
  cgcgcCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑T‑cc                                                                                       <  2:7070429/93‑1 (MQ=255)
    cgcCACTGCTGGATTTCCAGCCAACTCCAGTAAGCCGCGCCTGCCCACTTCAACACTTCACCCGCACTCCCTGAGCGGGAAAATTGCG‑T‑cccc                                                                                     <  2:6032786/93‑2 (MQ=255)
      ccACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑T‑ccccaa                                                                                   >  2:2218937/1‑90 (MQ=255)
       cACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑T‑ccccaac                                                                                  >  1:5920877/1‑89 (MQ=255)
       cACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑T‑ccccaac                                                                                  <  2:18422/93‑5 (MQ=255)
       cACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑T‑ccccaac                                                                                  >  1:2288199/1‑89 (MQ=255)
         ctgctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑T‑CCCCAaccc                                                                                >  1:4257073/1‑93 (MQ=255)
         ctgctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑T‑CCCCAaccc                                                                                <  2:4069213/93‑1 (MQ=255)
          tgctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAAcccc                                                                                >  2:3005261/1‑93 (MQ=255)
           gctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCa                                                                               >  2:6384627/1‑93 (MQ=255)
           gctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCa                                                                               >  1:6514880/1‑93 (MQ=255)
            ctgGATTTCCAGCCAAATCAAGTAAGGCACGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCag                                                                              >  2:2952040/1‑92 (MQ=255)
            ctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCAc                                                                              <  1:4899381/93‑1 (MQ=255)
            ctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCAc                                                                              <  1:1711167/93‑1 (MQ=255)
             tgGATTTCCAGCCAAATCAAGTAAGCCGCGCCGGCCCACTTCAACACGTCAAACGCAATCACTGAGCGGGAAAATAGCGAC‑CCCAACCCCACg                                                                             >  1:7033378/1‑93 (MQ=255)
              ggATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGc                                                                            >  1:6598816/1‑93 (MQ=255)
               gATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGcc                                                                           <  2:2335422/93‑1 (MQ=255)
               gATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGcc                                                                           >  2:192530/1‑93 (MQ=255)
               gATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGcc                                                                           >  2:2087130/1‑93 (MQ=255)
                aTTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCa                                                                          >  2:3558465/1‑93 (MQ=255)
                   tccAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAAcc                                                                       <  1:3093050/92‑1 (MQ=255)
                     cAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACGGAGCGGGAAAATAGCG‑TCCCCCACCCCACGCCAACCac                                                                     >  1:2682203/1‑92 (MQ=255)
                       gCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGca                                                                   >  1:5598402/1‑93 (MQ=255)
                       gCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGca                                                                   >  1:2823643/1‑93 (MQ=255)
                       gCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGca                                                                   >  1:2157460/1‑93 (MQ=255)
                       gCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGca                                                                   <  2:3998925/93‑1 (MQ=255)
                       gCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGca                                                                   <  1:5779567/93‑1 (MQ=255)
                          aaaTCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACaa                                                                >  1:6370531/1‑93 (MQ=255)
                           aaTCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAat                                                               <  1:4591115/93‑1 (MQ=255)
                            aTCAAGTAGGCCGCGCCTCCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAata                                                              <  1:7106898/93‑1 (MQ=255)
                            aTCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAata                                                              <  1:6294128/93‑1 (MQ=255)
                            aTCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAata                                                              <  1:4828848/93‑1 (MQ=255)
                            aTCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAata                                                              >  2:1750813/1‑93 (MQ=255)
                                aGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGaa                                                          <  1:2370943/93‑1 (MQ=255)
                                aGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGaa                                                          <  2:3656347/93‑1 (MQ=255)
                                 gTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAAt                                                         >  2:5067196/1‑93 (MQ=255)
                                 gTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAAt                                                         >  1:6458395/1‑93 (MQ=255)
                                     gCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGcc                                                     >  1:4999728/1‑93 (MQ=255)
                                     gCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGcc                                                     <  2:4631340/93‑1 (MQ=255)
                                      ccGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCa                                                    >  2:3416019/1‑93 (MQ=255)
                                      ccGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCa                                                    <  1:1532463/93‑1 (MQ=255)
                                         cgcCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTc                                                 >  2:161715/1‑93 (MQ=255)
                                          gcCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCACCCAGCACAATATGAATCGCCAGTcc                                                >  2:6707861/1‑93 (MQ=255)
                                          gcCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTcc                                                >  2:201662/1‑93 (MQ=255)
                                             tGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGt                                             >  2:123345/1‑93 (MQ=255)
                                              gCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTc                                            <  1:3798069/93‑1 (MQ=255)
                                                ccACTTCAACACTTCAAACGCAAGCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTg                                          <  1:4330427/93‑1 (MQ=255)
                                                 cacttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGa                                         >  2:4191740/1‑93 (MQ=255)
                                                 cacttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGa                                         >  1:3702281/1‑93 (MQ=255)
                                                  acttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGaa                                        >  1:6053529/1‑93 (MQ=255)
                                                  acttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGaa                                        >  2:7675329/1‑93 (MQ=255)
                                                   cttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCa                                                    <  1:725364/80‑1 (MQ=255)
                                                   cttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCa                                                    >  2:725364/1‑80 (MQ=255)
                                                   cttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAg                                       >  1:1095420/1‑93 (MQ=255)
                                                   cttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAg                                       >  1:7916791/1‑93 (MQ=255)
                                                   cttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAg                                       >  1:3344017/1‑93 (MQ=255)
                                                    ttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGc                                      >  2:3046500/1‑93 (MQ=255)
                                                    ttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGc                                      >  2:7851209/1‑93 (MQ=255)
                                                    ttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGc                                      >  1:2700116/1‑93 (MQ=255)
                                                    ttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGc                                      <  1:1879443/93‑1 (MQ=255)
                                                     tcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAgac                                     >  2:1260282/1‑91 (MQ=255)
                                                     tcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGcc                                     >  1:5296813/1‑93 (MQ=255)
                                                     tcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGcc                                     <  2:2512282/93‑1 (MQ=255)
                                                      caacacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGccc                                    <  1:4503292/93‑1 (MQ=255)
                                                         cacttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGc                                 <  2:2621669/93‑1 (MQ=255)
                                                          acttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCa                                <  2:2730464/93‑1 (MQ=255)
                                                           cttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCaa                               <  1:7842318/93‑1 (MQ=255)
                                                            ttcaaACGCAATCATTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCCGAAGCCCAGCAAt                              <  1:4758671/93‑1 (MQ=255)
                                                            ttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAAt                              >  2:4901988/1‑93 (MQ=255)
                                                            ttcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAAt                              >  1:1454773/1‑93 (MQ=255)
                                                             tcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATa                             <  2:5933727/93‑1 (MQ=255)
                                                             tcaaACGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATa                             >  2:5162768/1‑93 (MQ=255)
                                                               aaaCGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGa                           <  1:3176654/93‑1 (MQ=255)
                                                               aaaCGCAATCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGa                           <  2:7576101/93‑1 (MQ=255)
                                                                     aaTCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAc                     >  1:5513751/1‑93 (MQ=255)
                                                                     aaTCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAc                     <  1:983976/93‑1 (MQ=255)
                                                                     aaTCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAc                     >  1:7530366/1‑93 (MQ=255)
                                                                       tCACTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccg                   >  2:3230460/1‑93 (MQ=255)
                                                                          cTGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGACAccgcgc                >  1:3635331/1‑93 (MQ=255)
                                                                           tGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgcc               <  2:5552327/93‑1 (MQ=255)
                                                                           tGAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgcc               <  1:2507175/93‑1 (MQ=255)
                                                                            gAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccg              >  1:4562261/1‑93 (MQ=255)
                                                                            gAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccg              >  2:318130/1‑93 (MQ=255)
                                                                            gAGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccg              <  1:6239219/93‑1 (MQ=255)
                                                                             aGCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccgc             <  2:5383022/93‑1 (MQ=255)
                                                                              gCGGGAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccgcg            >  2:289865/1‑93 (MQ=255)
                                                                                gggAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGAt          <  1:3400067/93‑1 (MQ=255)
                                                                                gggAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGAt          >  1:5171359/1‑93 (MQ=255)
                                                                                 ggAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATa         >  2:5830278/1‑93 (MQ=255)
                                                                                  gAAAATAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATaa        <  2:1333564/93‑1 (MQ=255)
                                                                                     aaTAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCg     <  2:7365165/93‑1 (MQ=255)
                                                                                     aaTAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCg     <  1:3558466/93‑1 (MQ=255)
                                                                                     aaTAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCg     <  2:6243443/93‑1 (MQ=255)
                                                                                      aTAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCgg    >  2:3929005/1‑92 (MQ=255)
                                                                                      aTAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGt    <  2:1506205/93‑1 (MQ=255)
                                                                                      aTAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGt    <  1:12005/93‑1 (MQ=255)
                                                                                       tAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTg   <  2:6548187/93‑1 (MQ=255)
                                                                                       tAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTg   <  2:6166371/93‑1 (MQ=255)
                                                                                       tAGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTg   <  1:3431557/93‑1 (MQ=255)
                                                                                        aGCG‑TCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTgg  <  1:1274928/93‑1 (MQ=255)
                                                                                              |                                                                                       
GGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑T‑CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGG  >  NC_000913/4006388‑4006567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑T‑CCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAG  >  NC_000913/4006392‑4006576
                                                                                             |                                                                                              
CGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑T‑CCC‑CA                                                                                             >  SRR4302543.6272976/1‑94 (MQ=60)
CGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑T‑CCC‑CA                                                                                             >  SRR4302543.1608692/1‑94 (MQ=60)
 GCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑T‑CCCcaa                                                                                             >  SRR4302543.6430764/1‑91 (MQ=60)
  CCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGTGCGGGATAATAGCG‑TCCCC‑AAC                                                                                            >  SRR4302543.7086910/1‑94 (MQ=60)
  CCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AAC                                                                                            >  SRR4302543.2309092/1‑94 (MQ=60)
  CCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AAC                                                                                            >  SRR4302543.5974970/1‑94 (MQ=60)
  CCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AAC                                                                                            <  SRR4302543.1474921/94‑1 (MQ=60)
   CACTGCTGGATTTCCAGCCAAATCATGTAAGCCGCGCCTGCCCACTTCACCACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACC                                                                                           >  SRR4302543.4511889/1‑94 (MQ=60)
   CACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACC                                                                                           >  SRR4302543.7586308/1‑94 (MQ=60)
    ACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCC                                                                                          >  SRR4302543.5992395/1‑94 (MQ=60)
    ACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCC                                                                                          >  SRR4302543.650970/1‑94 (MQ=60)
    ACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCC                                                                                          >  SRR4302543.4295724/1‑94 (MQ=60)
     CTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCC                                                                                         >  SRR4302543.5087013/1‑94 (MQ=60)
      TGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCA                                                                                        >  SRR4302543.6576242/1‑94 (MQ=60)
      TGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCA                                                                                        >  SRR4302543.6302342/1‑94 (MQ=60)
      TGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCA                                                                                        >  SRR4302543.3775350/1‑94 (MQ=60)
      TGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCA                                                                                        >  SRR4302543.2308777/1‑94 (MQ=60)
       GCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCAC                                                                                       >  SRR4302543.2946886/1‑94 (MQ=60)
        TTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGGCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACG                                                                                      <  SRR4302543.2722145/94‑1 (MQ=60)
        GTGGATTTCCCGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACG                                                                                      <  SRR4302543.2370852/94‑1 (MQ=60)
        CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACG                                                                                      >  SRR4302543.5689005/1‑94 (MQ=60)
        CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACG                                                                                      <  SRR4302543.2370851/94‑1 (MQ=60)
        CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACG                                                                                      <  SRR4302543.4944042/94‑1 (MQ=60)
        CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACG                                                                                      >  SRR4302543.5034901/1‑94 (MQ=60)
        CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACG                                                                                      <  SRR4302543.1726469/94‑1 (MQ=60)
        CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACC                                                                                      >  SRR4302543.337971/1‑94 (MQ=60)
        CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑T‑CCCccacaccacc                                                                                      >  SRR4302543.5689006/1‑84 (MQ=60)
        CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGAG‑TCCCC‑AAACCCACG                                                                                      >  SRR4302543.1348172/1‑94 (MQ=60)
        CTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCGGCCCACTTCAACACGTCAAACGCAATCACTGAGCGGGAAAATAGCGAC‑CCC‑AACCCCACG                                                                                      >  SRR4302543.7101036/1‑94 (MQ=60)
         TGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGC                                                                                     >  SRR4302543.4629860/1‑94 (MQ=60)
         TGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGC                                                                                     >  SRR4302543.6661001/1‑94 (MQ=60)
          GGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCC                                                                                    >  SRR4302543.6036039/1‑94 (MQ=60)
            ATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAA                                                                                  <  SRR4302543.5515799/94‑1 (MQ=60)
               TCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCA                                                                               <  SRR4302543.3120868/94‑1 (MQ=60)
               TCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCA                                                                               >  SRR4302543.5974711/1‑94 (MQ=60)
                CCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAG                                                                              <  SRR4302543.3725512/94‑1 (MQ=60)
                CCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAG                                                                              <  SRR4302543.2571607/94‑1 (MQ=60)
                CCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAG                                                                              >  SRR4302543.2706508/1‑94 (MQ=60)
                CCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACGGAGCGGGAAAATAGCG‑TCCCC‑CACCCCACGCCAACCAC                                                                              >  SRR4302543.2706511/1‑94 (MQ=60)
                 CAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGC                                                                             >  SRR4302543.683503/1‑94 (MQ=60)
                 CAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGC                                                                             <  SRR4302543.3452392/94‑1 (MQ=60)
                 CAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGC                                                                             >  SRR4302543.1794266/1‑94 (MQ=60)
                  AGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCA                                                                            >  SRR4302543.2176779/1‑94 (MQ=60)
                  AGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCA                                                                            >  SRR4302543.5649401/1‑94 (MQ=60)
                  AGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCA                                                                            >  SRR4302543.2849473/1‑94 (MQ=60)
                   GCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCAC                                                                           <  SRR4302543.5832168/94‑1 (MQ=60)
                   GCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCAC                                                                           >  SRR4302543.3529486/1‑94 (MQ=60)
                   GCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCAC                                                                           <  SRR4302543.7012737/94‑1 (MQ=60)
                     CAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATTACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAA                                                                         >  SRR4302543.6430453/1‑94 (MQ=60)
                     CAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGCC‑CCC‑AACCCCACGCCAACCAGCACAA                                                                         >  SRR4302543.3801024/1‑94 (MQ=60)
                     CAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAA                                                                         >  SRR4302543.6430451/1‑94 (MQ=60)
                      AAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAAT                                                                        >  SRR4302543.5280230/1‑94 (MQ=60)
                      AAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAAT                                                                        >  SRR4302543.2742104/1‑94 (MQ=60)
                       AATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATA                                                                       <  SRR4302543.4632816/94‑1 (MQ=60)
                        ATCAAGTAGGCCGCGCCTCCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATAT                                                                      <  SRR4302543.7175936/94‑1 (MQ=60)
                        ATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATAT                                                                      <  SRR4302543.6179167/94‑1 (MQ=60)
                        ATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATAT                                                                      <  SRR4302543.6353377/94‑1 (MQ=60)
                        ATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATAT                                                                      <  SRR4302543.2009364/94‑1 (MQ=60)
                        ATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATAT                                                                      <  SRR4302543.4872908/94‑1 (MQ=60)
                        ATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATAT                                                                      >  SRR4302543.4552619/1‑94 (MQ=60)
                        ATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATAT                                                                      <  SRR4302543.7671927/94‑1 (MQ=60)
                         TCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATG                                                                     >  SRR4302543.4503441/1‑94 (MQ=60)
                         TCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATG                                                                     <  SRR4302543.5577610/94‑1 (MQ=60)
                           AAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAA                                                                   <  SRR4302543.7291526/94‑1 (MQ=60)
                            AGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAAT                                                                  >  SRR4302543.6519252/1‑94 (MQ=60)
                            AGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAAT                                                                  >  SRR4302543.635971/1‑94 (MQ=60)
                            AGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAAT                                                                  <  SRR4302543.7268055/94‑1 (MQ=60)
                            AGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAAT                                                                  <  SRR4302543.2392431/94‑1 (MQ=60)
                             GTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATC                                                                 >  SRR4302543.2428085/1‑94 (MQ=60)
                             GTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATC                                                                 >  SRR4302543.1957337/1‑94 (MQ=60)
                             GTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATC                                                                 >  SRR4302543.5032454/1‑94 (MQ=60)
                              TAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCG                                                                <  SRR4302543.6631366/94‑1 (MQ=60)
                              TAACCCGCGCCCGCCCACTTCAACACTTCAAACCGAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCG                                                                <  SRR4302543.6631369/94‑1 (MQ=60)
                                AGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCC                                                              >  SRR4302543.5045234/1‑94 (MQ=60)
                                 GCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCA                                                             <  SRR4302543.3123502/94‑1 (MQ=60)
                                 GCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCA                                                             >  SRR4302543.1479008/1‑94 (MQ=60)
                                 GCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACACCAACCAGCACAATATGAATCGCCA                                                             >  SRR4302543.7941457/1‑94 (MQ=60)
                                  gatctccactctACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAG                                                            <  SRR4302543.731890/82‑1 (MQ=60)
                                  CCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAG                                                            <  SRR4302543.1546201/94‑1 (MQ=60)
                                  CCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAG                                                            <  SRR4302543.3613782/94‑1 (MQ=60)
                                    GCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTC                                                          <  SRR4302543.4378908/94‑1 (MQ=60)
                                      GCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCG                                                        <  SRR4302543.3031832/94‑1 (MQ=60)
                                      GCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCG                                                        >  SRR4302543.4536332/1‑94 (MQ=60)
                                       CCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGG                                                       <  SRR4302543.1524507/94‑1 (MQ=60)
                                        CTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGT                                                      >  SRR4302543.1185573/1‑94 (MQ=60)
                                        CTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGT                                                      >  SRR4302543.5062803/1‑94 (MQ=60)
                                        CTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGT                                                      >  SRR4302543.7361448/1‑94 (MQ=60)
                                        CTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGT                                                      <  SRR4302543.4675924/94‑1 (MQ=60)
                                        CTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGT                                                      >  SRR4302543.2711343/1‑94 (MQ=60)
                                          GCCCACTTCAACACTTCAAGCGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCT                                                    <  SRR4302543.7107127/94‑1 (MQ=60)
                                          GCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCT                                                    <  SRR4302543.3831534/94‑1 (MQ=60)
                                          GCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCT                                                    <  SRR4302543.642525/94‑1 (MQ=60)
                                           CCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTG                                                   >  SRR4302543.4923556/1‑94 (MQ=60)
                                           CCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTG                                                   <  SRR4302543.2674860/94‑1 (MQ=60)
                                           CCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTG                                                   <  SRR4302543.527481/94‑1 (MQ=60)
                                            CCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGA                                                  <  SRR4302543.4369718/94‑1 (MQ=60)
                                            CCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGA                                                  >  SRR4302543.6558750/1‑94 (MQ=60)
                                            CCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGA                                                  >  SRR4302543.3734828/1‑94 (MQ=60)
                                            CCACTTCAACACTTCAAACGCAAGCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGA                                                  <  SRR4302543.4369719/94‑1 (MQ=60)
                                             CACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAA                                                 >  SRR4302543.6110834/1‑94 (MQ=60)
                                             CACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑T‑CCCGAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAA                                                 <  SRR4302543.3729807/94‑1 (MQ=60)
                                              ACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAG                                                >  SRR4302543.7991158/1‑94 (MQ=60)
                                              ACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAG                                                <  SRR4302543.387879/94‑1 (MQ=60)
                                              ACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAG                                                >  SRR4302543.3980716/1‑94 (MQ=60)
                                              ACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAG                                                >  SRR4302543.3374127/1‑94 (MQ=60)
                                              ACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAG                                                >  SRR4302543.1105275/1‑94 (MQ=60)
                                               CTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGC                                               >  SRR4302543.2724605/1‑94 (MQ=60)
                                               CTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGC                                               >  SRR4302543.1387769/1‑94 (MQ=60)
                                                TTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCC                                              >  SRR4302543.5344631/1‑94 (MQ=60)
                                                TTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCC                                              >  SRR4302543.5155159/1‑94 (MQ=60)
                                                TTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCC                                              >  SRR4302543.768163/1‑94 (MQ=60)
                                                TTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCC                                              <  SRR4302543.3189223/94‑1 (MQ=60)
                                                TTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCC                                              <  SRR4302543.1896333/94‑1 (MQ=60)
                                                 TCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCC                                             <  SRR4302543.7147440/94‑1 (MQ=60)
                                                  CAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCA                                            <  SRR4302543.4544230/94‑1 (MQ=60)
                                                   AACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAG                                           >  SRR4302543.7753607/1‑94 (MQ=60)
                                                      ACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAA                                        >  SRR4302543.4879882/1‑94 (MQ=60)
                                                      ACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAA                                        >  SRR4302543.3628551/1‑94 (MQ=60)
                                                       CTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAAT                                       <  SRR4302543.7916243/94‑1 (MQ=60)
                                                       CTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAAT                                       >  SRR4302543.1467905/1‑94 (MQ=60)
                                                        TTCAAACGCAATCATTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCCGAAGCCCAGCAATA                                      <  SRR4302543.4802154/94‑1 (MQ=60)
                                                         TCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAG                                     <  SRR4302543.1751178/94‑1 (MQ=60)
                                                         TCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAG                                     >  SRR4302543.4861366/1‑94 (MQ=60)
                                                         TCAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAG                                     <  SRR4302543.327852/94‑1 (MQ=60)
                                                          CAAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGA                                    <  SRR4302543.3481521/94‑1 (MQ=60)
                                                           AAACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAC                                   <  SRR4302543.3205277/94‑1 (MQ=60)
                                                            AACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACG                                  >  SRR4302543.4631218/1‑94 (MQ=60)
                                                            AACGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACG                                  <  SRR4302543.1114519/94‑1 (MQ=60)
                                                            AACGCAAACACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACG                                  <  SRR4302543.850944/94‑1 (MQ=60)
                                                              CGCAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCC                                <  SRR4302543.3411914/94‑1 (MQ=60)
                                                                CAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAC                              <  SRR4302543.4597363/94‑1 (MQ=60)
                                                                CAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAC                              >  SRR4302543.7602188/1‑94 (MQ=60)
                                                                CAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAC                              >  SRR4302543.1705168/1‑94 (MQ=60)
                                                                CAATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAC                              >  SRR4302543.5563824/1‑94 (MQ=60)
                                                                 AATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACC                             >  SRR4302543.5644428/1‑94 (MQ=60)
                                                                 AATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACC                             <  SRR4302543.992664/94‑1 (MQ=60)
                                                                 AATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACC                             >  SRR4302543.4737340/1‑94 (MQ=60)
                                                                 AATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACCCCAACCAGCACAATCTGAATCGCCAGTCCGGTCTGAAGCCCAGCGATAGACGCCACC                             >  SRR4302543.4737341/1‑94 (MQ=60)
                                                                  ATCACTGAGCGGGAAAATAGCGCC‑CCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCG                            <  SRR4302543.3322923/94‑1 (MQ=60)
                                                                  ATCACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCG                            >  SRR4302543.4855509/1‑94 (MQ=60)
                                                                   ACACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGC                           <  SRR4302543.6333815/94‑1 (MQ=60)
                                                                    CACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCG                          >  SRR4302543.7965352/1‑94 (MQ=60)
                                                                    CACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCG                          >  SRR4302543.593862/1‑94 (MQ=60)
                                                                     ACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGC                         <  SRR4302543.1269340/94‑1 (MQ=60)
                                                                     ACTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGACACCGCGC                         >  SRR4302543.3667325/1‑94 (MQ=60)
                                                                      CTGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCC                        >  SRR4302543.1232169/1‑94 (MQ=60)
                                                                       TGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCG                       >  SRR4302543.4603783/1‑94 (MQ=60)
                                                                       TGAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCG                       <  SRR4302543.2529942/94‑1 (MQ=60)
                                                                        GAGCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGC                      <  SRR4302543.6298092/94‑1 (MQ=60)
                                                                          GCGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGA                    <  SRR4302543.608307/94‑1 (MQ=60)
                                                                           CGGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGAT                   >  SRR4302543.5218066/1‑94 (MQ=60)
                                                                            GGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATC                  >  SRR4302543.5586613/1‑94 (MQ=60)
                                                                            GGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATA                  <  SRR4302543.3430529/94‑1 (MQ=60)
                                                                            GGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATA                  <  SRR4302543.5755010/94‑1 (MQ=60)
                                                                            GGGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATA                  <  SRR4302543.2269522/94‑1 (MQ=60)
                                                                             GGAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAA                 >  SRR4302543.826691/1‑94 (MQ=60)
                                                                              GAAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAAC                <  SRR4302543.280320/94‑1 (MQ=60)
                                                                               AAAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACC               <  SRR4302543.247483/94‑1 (MQ=60)
                                                                                AAATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCG              >  SRR4302543.6571325/1‑94 (MQ=60)
                                                                                 AATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGT             >  SRR4302543.3679919/1‑94 (MQ=60)
                                                                                 AATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGT             <  SRR4302543.3589985/94‑1 (MQ=60)
                                                                                 AATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGG             >  SRR4302543.1918198/1‑94 (MQ=60)
                                                                                  ATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTG            <  SRR4302543.3457489/94‑1 (MQ=60)
                                                                                  ATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTG            <  SRR4302543.12110/94‑1 (MQ=60)
                                                                                  ATAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTG            <  SRR4302543.3457490/94‑1 (MQ=60)
                                                                                   TAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGG           <  SRR4302543.5347117/94‑1 (MQ=60)
                                                                                   TAGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGG           <  SRR4302543.3462263/94‑1 (MQ=60)
                                                                                    aagcgtcCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGG           <  SRR4302543.995059/87‑1 (MQ=60)
                                                                                    aagcgtcCCC‑AACCCCACGCCAACCAGCACAATATAAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGG           <  SRR4302543.5347116/87‑1 (MQ=60)
                                                                                    AGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGT          >  SRR4302543.424514/1‑94 (MQ=60)
                                                                                    AGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGT          <  SRR4302543.4680213/94‑1 (MQ=60)
                                                                                    AGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGT          <  SRR4302543.1286306/94‑1 (MQ=60)
                                                                                    AGCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGT          >  SRR4302543.7337314/1‑94 (MQ=60)
                                                                                     GCG‑TCCCC‑AACCCCACGCCAACCAGCACAATATGACGCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGGCGCGATAACCGTGGTT         <  SRR4302543.7487203/94‑1 (MQ=60)
                                                                                       G‑C‑CCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAG      <  SRR4302543.1607843/94‑1 (MQ=60)
                                                                                        gtcCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGA       >  SRR4302543.5145366/4‑94 (MQ=60)
                                                                                        gtcCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGA       >  SRR4302543.7285444/4‑94 (MQ=60)
                                                                                        gtcCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGA       >  SRR4302543.1596067/4‑94 (MQ=60)
                                                                                         tcCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAG      >  SRR4302543.2098072/3‑94 (MQ=60)
                                                                                         C‑CCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGC     >  SRR4302543.3122996/1‑94 (MQ=60)
                                                                                         C‑CCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGC     >  SRR4302543.1720258/1‑94 (MQ=60)
                                                                                         C‑CCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGC     >  SRR4302543.3697351/1‑94 (MQ=60)
                                                                                           CCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCG    <  SRR4302543.6444719/94‑1 (MQ=60)
                                                                                           CCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCG    <  SRR4302543.5614904/94‑1 (MQ=60)
                                                                                            CC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGA   >  SRR4302543.3371583/1‑94 (MQ=60)
                                                                                            CC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGA   <  SRR4302543.203363/94‑1 (MQ=60)
                                                                                            CC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGA   <  SRR4302543.2659973/94‑1 (MQ=60)
                                                                                             C‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAG  <  SRR4302543.4495306/94‑1 (MQ=60)
                                                                                             C‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAG  <  SRR4302543.2568916/94‑1 (MQ=60)
                                                                                             C‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAG  <  SRR4302543.5840613/94‑1 (MQ=60)
                                                                                             |                                                                                              
CGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCG‑T‑CCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAG  >  NC_000913/4006392‑4006576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑