Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,043,629	A→G	I185T (ATT→ACT)	yihG ←	putative endonuclease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,043,629	0	A	G	99.4%	1121.3 / ‑3.8	355	I185T (ATT→ACT)	yihG	putative endonuclease
Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (149/204); total (150/205)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01

Only 100 of 390 total aligned reads displayed.

GCCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAATGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAATAA  >  NC_000913/4043539‑4043718

gccgccTTTGGTGGCAATAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGtg                                                                                         <  2:1498681/93‑1 (MQ=255)

gccgccTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGtg                                                                                         <  2:7899250/93‑1 (MQ=255)

  cgccTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGtggt                                                                                       <  2:3217233/93‑1 (MQ=255)

  cgccTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGtggt                                                                                       <  1:3612471/93‑1 (MQ=255)

    ccTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGtggtgg                                                                                     <  2:3938442/93‑1 (MQ=255)

    ccTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGtggtgg                                                                                     >  1:4327512/1‑93 (MQ=255)

      tttGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAgtggtggtg                                                                                   >  1:5258702/1‑93 (MQ=255)

       ttGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGtggtggtgg                                                                                  <  1:2623017/93‑1 (MQ=255)

        tggtggCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTggg                                                                                 <  1:5152805/93‑1 (MQ=255)

           tggCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATg                                                                              >  1:4636594/1‑93 (MQ=255)

           tggCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATg                                                                              >  1:3109960/1‑93 (MQ=255)

           tggCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATg                                                                              >  2:6617443/1‑93 (MQ=255)

              caacaaGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAg                                                                           >  1:5081139/1‑93 (MQ=255)

               aacaaGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAgg                                                                          >  2:7785567/1‑93 (MQ=255)

               aacaaGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAgg                                                                          >  1:5406795/1‑93 (MQ=255)

               aacaaGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAgg                                                                          >  2:2297016/1‑93 (MQ=255)

                acaaGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGc                                                                         <  1:881435/93‑1 (MQ=255)

                acaaGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGc                                                                         <  2:6162568/93‑1 (MQ=255)

                 caaGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCg                                                                        >  2:6762535/1‑93 (MQ=255)

                 caaGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCg                                                                        >  2:5449828/1‑93 (MQ=255)

                  aaGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGa                                                                       <  1:5478026/93‑1 (MQ=255)

                  aaGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGa                                                                       <  1:1956319/93‑1 (MQ=255)

                   aGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGaa                                                                      <  1:718293/93‑1 (MQ=255)

                     ttttGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGaaat                                                                    >  1:6579169/1‑92 (MQ=255)

                     ttttGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAAc                                                                    <  1:5819671/93‑1 (MQ=255)

                        tGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACttt                                                                 <  1:6022961/93‑1 (MQ=255)

                        tGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACttt                                                                 <  2:1680446/93‑1 (MQ=255)

                         gAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACtttt                                                                <  1:1291817/93‑1 (MQ=255)

                           aaaGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTca                                                              <  2:2962418/93‑1 (MQ=255)

                           aaaGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTca                                                              <  1:682809/93‑1 (MQ=255)

                             agtggagtggGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTcaca                                                            <  2:3496073/93‑1 (MQ=255)

                              gtggagtggGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACaa                                                           <  2:7191329/93‑1 (MQ=255)

                              gtggagtggGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACaa                                                           >  1:1014399/1‑93 (MQ=255)

                                ggagtggGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGa                                                         >  1:6291570/1‑93 (MQ=255)

                                ggagtggGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGa                                                         <  1:3739292/93‑1 (MQ=255)

                                 gagtggGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGaa                                                        <  2:6901643/93‑1 (MQ=255)

                                 gagtggGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGaa                                                        <  1:6865254/93‑1 (MQ=255)

                                 gagtggGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGaa                                                        <  1:6953004/93‑1 (MQ=255)

                                 gagtggGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACAAAATTGACAGTGGTGGTAGGATGCAGGCGAAACTTTTCACAAGaa                                                        <  2:2067373/93‑1 (MQ=255)

                                  agtggGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAAc                                                       <  1:1881282/93‑1 (MQ=255)

                                   gtggGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACg                                                      <  1:1611597/93‑1 (MQ=255)

                                   gtggGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACg                                                      >  2:533722/1‑93 (MQ=255)

                                    tggGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGc                                                     <  1:7681657/93‑1 (MQ=255)

                                    tggGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGc                                                     <  1:4717130/93‑1 (MQ=255)

                                        tttGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAg                                                 <  1:7886313/93‑1 (MQ=255)

                                         ttGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGt                                                <  2:4146038/93‑1 (MQ=255)

                                         ttGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGt                                                <  2:5068918/93‑1 (MQ=255)

                                          tGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTg                                               <  1:7507787/93‑1 (MQ=255)

                                          tGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTg                                               >  2:7660502/1‑93 (MQ=255)

                                           gCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTgg                                              >  1:7312976/1‑93 (MQ=255)

                                            gttgtGTTTTTTCTGCGGGGAACCGGAACCCTTAAAGAAATTGAACAGGGGGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGt                                             <  2:7711584/89‑1 (MQ=255)

                                            cTGAGGTTTTTC‑TGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGtt                                            <  2:284444/93‑1 (MQ=255)

                                             tGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGtt                                            <  1:211563/93‑1 (MQ=255)

                                             tGATGTTTTTCTTGCGTGAAACGGCAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGtt                                            <  1:2900610/93‑1 (MQ=255)

                                               aTGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTTGTTTc                                          >  2:6994168/1‑93 (MQ=255)

                                               aTGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGGGGTTTc                                          >  2:4916022/1‑93 (MQ=255)

                                                 gTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCaa                                        >  2:2648557/1‑93 (MQ=255)

                                                   ttttCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACa                                      <  2:4210330/93‑1 (MQ=255)

                                                    tttCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACAt                                     <  1:1793238/93‑1 (MQ=255)

                                                     ttCTTTCCTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATc                                    <  1:4271630/93‑1 (MQ=255)

                                                       cTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCtt                                  <  1:3861468/93‑1 (MQ=255)

                                                       cTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCtt                                  <  1:4989979/93‑1 (MQ=255)

                                                        ttGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCttt                                 >  1:3417172/1‑93 (MQ=255)

                                                        ttGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCttt                                 >  2:3293544/1‑93 (MQ=255)

                                                         tGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTa                                <  2:7418527/93‑1 (MQ=255)

                                                         tGCGCGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTa                                <  2:2896104/93‑1 (MQ=255)

                                                          gCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTAc                               >  2:5722813/1‑93 (MQ=255)

                                                          gCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTAc                               <  1:2374838/93‑1 (MQ=255)

                                                           cGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTAcc                              <  1:321298/93‑1 (MQ=255)

                                                            gTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCa                             <  2:803836/93‑1 (MQ=255)

                                                            gTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCa                             <  1:5730526/93‑1 (MQ=255)

                                                              gAAACGGGAGCCTTCAACGAAATTAACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAGCGCCGAGCGGTTTCAAAATCTTTACCACg                           >  2:7586054/1‑93 (MQ=255)

                                                                aaCGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTc                         >  2:4613920/1‑93 (MQ=255)

                                                                 aCGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCg                        >  1:6701336/1‑93 (MQ=255)

                                                                    ggAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTc                     <  2:531766/93‑1 (MQ=255)

                                                                     gAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTcc                    <  2:3328757/93‑1 (MQ=255)

                                                                     gAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTcc                    <  2:2390344/93‑1 (MQ=255)

                                                                      aGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCg                   <  1:2754557/93‑1 (MQ=255)

                                                                       gCCTTCAACGAAATTGACAGTGGTGGTGGGACGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCgg                  >  1:611795/1‑93 (MQ=255)

                                                                        ccTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGa                 >  2:6278017/1‑93 (MQ=255)

                                                                          ttCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGa                 <  2:3883170/91‑1 (MQ=255)

                                                                          ttCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATg               >  1:4896795/1‑93 (MQ=255)

                                                                          ttCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATg               >  2:1922650/1‑93 (MQ=255)

                                                                          ttCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATg               <  2:6557746/93‑1 (MQ=255)

                                                                          ttCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATg               >  2:1132335/1‑93 (MQ=255)

                                                                          ttCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATg               >  1:6463000/1‑93 (MQ=255)

                                                                           tCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGa              >  1:2077943/1‑93 (MQ=255)

                                                                           tCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGa              <  1:458842/93‑1 (MQ=255)

                                                                             aaCGAAATTGACAGTGGTGGGGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACg            >  1:2536331/1‑93 (MQ=255)

                                                                               cGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGta          <  2:431602/93‑1 (MQ=255)

                                                                                gAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGtaa         <  1:4005569/93‑1 (MQ=255)

                                                                                gAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGtaa         <  2:3120614/93‑1 (MQ=255)

                                                                                gAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGtaa         >  2:4081856/1‑93 (MQ=255)

                                                                                 aaaTTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGtaat        >  2:1867904/1‑93 (MQ=255)

                                                                                 aaaTTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGtaat        <  2:2002906/93‑1 (MQ=255)

                                                                                  aagtGACAGTGGGGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGtaata       <  2:5598247/90‑1 (MQ=255)

                                                                                     tGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTaataaat    <  2:3712737/93‑1 (MQ=255)

                                                                                     tGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTaataaat    <  2:4179670/93‑1 (MQ=255)

                                                                                      gACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTaataaata   <  2:3596724/93‑1 (MQ=255)

                                                                                       aCAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAataaataa  >  2:1366419/1‑93 (MQ=255)

GCCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAATGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAATAA  >  NC_000913/4043539‑4043718

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 209 total aligned reads displayed.

CCTGCCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAATGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAATAAGCGC  >  NC_000913/4043536‑4043722

CCTGCCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAG                                                                                               <  SRR4302543.1380136/94‑1 (MQ=60)

CCTGCCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAG                                                                                               >  SRR4302543.1409680/1‑94 (MQ=60)

CCTGCCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAG                                                                                               <  SRR4302543.1616428/94‑1 (MQ=60)

 CTGCCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGT                                                                                              >  SRR4302543.4796947/1‑94 (MQ=60)

 CTGCCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGAGTGAAACGGGAGCCTTCAACGCAATTGACAGT                                                                                              >  SRR4302543.3643401/1‑94 (MQ=60)

  TGCCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTG                                                                                             <  SRR4302543.6971139/94‑1 (MQ=60)

  TGCCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTG                                                                                             <  SRR4302543.51143/94‑1 (MQ=60)

  TGCCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTG                                                                                             >  SRR4302543.7427335/1‑94 (MQ=60)

  TGCCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTG                                                                                             >  SRR4302543.4732820/1‑94 (MQ=60)

  TGCCGCCTGTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTG                                                                                             <  SRR4302543.6971138/94‑1 (MQ=60)

   GCCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGG                                                                                            <  SRR4302543.2843809/94‑1 (MQ=60)

   GCCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGG                                                                                            <  SRR4302543.1840829/94‑1 (MQ=60)

    CCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGT                                                                                           <  SRR4302543.372077/94‑1 (MQ=60)

    CCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGT                                                                                           <  SRR4302543.2605404/94‑1 (MQ=60)

     CGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTG                                                                                          <  SRR4302543.2625212/94‑1 (MQ=60)

     CGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTG                                                                                          <  SRR4302543.316095/94‑1 (MQ=60)

     CGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTG                                                                                          <  SRR4302543.3644325/94‑1 (MQ=60)

     CGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTG                                                                                          >  SRR4302543.367159/1‑94 (MQ=60)

     CGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTG                                                                                          >  SRR4302543.6773217/1‑94 (MQ=60)

      GCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGG                                                                                         >  SRR4302543.4366793/1‑94 (MQ=60)

       CCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGT                                                                                        >  SRR4302543.3586178/1‑94 (MQ=60)

       CCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGT                                                                                        <  SRR4302543.5848454/94‑1 (MQ=60)

        CTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTG                                                                                       >  SRR4302543.5306123/1‑94 (MQ=60)

        CTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTG                                                                                       >  SRR4302543.6377992/1‑94 (MQ=60)

        CTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTG                                                                                       >  SRR4302543.5306124/1‑94 (MQ=60)

        CTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTG                                                                                       <  SRR4302543.6171518/94‑1 (MQ=60)

        CTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTG                                                                                       <  SRR4302543.4000592/94‑1 (MQ=60)

        CTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTG                                                                                       <  SRR4302543.6171519/94‑1 (MQ=60)

         TTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGG                                                                                      >  SRR4302543.7897728/1‑94 (MQ=60)

          TTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGG                                                                                     <  SRR4302543.2646771/94‑1 (MQ=60)

           TGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGA                                                                                    <  SRR4302543.6851778/94‑1 (MQ=60)

           TGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGA                                                                                    <  SRR4302543.5199374/94‑1 (MQ=60)

           TGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGA                                                                                    >  SRR4302543.5286191/1‑94 (MQ=60)

            GGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGAT                                                                                   >  SRR4302543.6967154/1‑94 (MQ=60)

            GGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGAT                                                                                   <  SRR4302543.6174131/94‑1 (MQ=60)

            GGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGAT                                                                                   <  SRR4302543.4425673/94‑1 (MQ=60)

            GGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGAT                                                                                   <  SRR4302543.583059/94‑1 (MQ=60)

             GTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATG                                                                                  >  SRR4302543.3137934/1‑94 (MQ=60)

             GTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATG                                                                                  >  SRR4302543.4678758/1‑94 (MQ=60)

              TGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGC                                                                                 >  SRR4302543.4632107/1‑94 (MQ=60)

                GCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAG                                                                               >  SRR4302543.3476991/1‑94 (MQ=60)

                GCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAG                                                                               >  SRR4302543.6715432/1‑94 (MQ=60)

                GCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAG                                                                               >  SRR4302543.5127221/1‑94 (MQ=60)

                GCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAG                                                                               <  SRR4302543.851465/94‑1 (MQ=60)

                GCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAG                                                                               <  SRR4302543.6179631/94‑1 (MQ=60)

                 CAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGG                                                                              >  SRR4302543.5455948/1‑94 (MQ=60)

                 CAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGG                                                                              <  SRR4302543.1665083/94‑1 (MQ=60)

                 CAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGG                                                                              >  SRR4302543.7650605/1‑94 (MQ=60)

                 CAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGG                                                                              <  SRR4302543.6952170/94‑1 (MQ=60)

                 CAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGG                                                                              >  SRR4302543.3067000/1‑94 (MQ=60)

                  AACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGC                                                                             >  SRR4302543.212546/1‑94 (MQ=60)

                  AACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGC                                                                             <  SRR4302543.3063200/94‑1 (MQ=60)

                  AACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTCCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGGTGCAGGC                                                                             <  SRR4302543.3385279/94‑1 (MQ=60)

                   ACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCG                                                                            <  SRR4302543.889255/94‑1 (MQ=60)

                   ACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCG                                                                            >  SRR4302543.6607061/1‑94 (MQ=60)

                    CAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGA                                                                           >  SRR4302543.6401026/1‑94 (MQ=60)

                    CAAGTTTTGAAAAGGGGAGCGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCATTCAACGAAATTGACAGTGGTGGGGGGATGCAGGCGA                                                                           >  SRR4302543.6401025/1‑94 (MQ=60)

                     AAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAA                                                                          >  SRR4302543.4318104/1‑94 (MQ=60)

                     AAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAA                                                                          <  SRR4302543.5527669/94‑1 (MQ=60)

                     AAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAA                                                                          <  SRR4302543.1973869/94‑1 (MQ=60)

                      AGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAA                                                                         <  SRR4302543.724786/94‑1 (MQ=60)

                       GTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAAT                                                                        >  SRR4302543.6641121/1‑94 (MQ=60)

                       GTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAAC                                                                        >  SRR4302543.3866131/1‑94 (MQ=60)

                       GTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAAC                                                                        <  SRR4302543.3728348/94‑1 (MQ=60)

                       GTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAAC                                                                        <  SRR4302543.6926860/94‑1 (MQ=60)

                       GTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAAC                                                                        >  SRR4302543.463210/1‑94 (MQ=60)

                        TTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACT                                                                       <  SRR4302543.3238485/94‑1 (MQ=60)

                        TTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACT                                                                       <  SRR4302543.5872587/94‑1 (MQ=60)

                           TGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTT                                                                    <  SRR4302543.6078912/94‑1 (MQ=60)

                            GAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTC                                                                   <  SRR4302543.1303316/94‑1 (MQ=60)

                            GAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTC                                                                   <  SRR4302543.5864714/94‑1 (MQ=60)

                            GAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTC                                                                   >  SRR4302543.2207322/1‑94 (MQ=60)

                              AAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCAC                                                                 <  SRR4302543.5690972/94‑1 (MQ=60)

                              AAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCAC                                                                 >  SRR4302543.5101509/1‑94 (MQ=60)

                              AAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCAC                                                                 <  SRR4302543.2846368/94‑1 (MQ=60)

                              AAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCAC                                                                 <  SRR4302543.689109/94‑1 (MQ=60)

                               AAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACA                                                                <  SRR4302543.4749653/94‑1 (MQ=60)

                               AAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACA                                                                >  SRR4302543.6013290/1‑94 (MQ=60)

                               AAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGCGGTGGGGGGCAGGCGAAACTTTTCACA                                                                >  SRR4302543.568028/1‑94 (MQ=60)

                                AGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGGTGCAGGCGAAACTTTTCACAA                                                               >  SRR4302543.5098069/1‑94 (MQ=60)

                                AGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAA                                                               >  SRR4302543.1023374/1‑94 (MQ=60)

                                 GTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAG                                                              <  SRR4302543.7616541/94‑1 (MQ=60)

                                 GTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAG                                                              >  SRR4302543.2465907/1‑94 (MQ=60)

                                 GTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCATCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAG                                                              <  SRR4302543.6255643/94‑1 (MQ=60)

                                  TGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGA                                                             >  SRR4302543.4032488/1‑94 (MQ=60)

                                  TGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGA                                                             >  SRR4302543.6350805/1‑94 (MQ=60)

                                  TGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGA                                                             <  SRR4302543.3556411/94‑1 (MQ=60)

                                  GGGAGTGGGTTTGCTGATGTTTTTCGTGCGTGAAACGGGAACCTTCAACGAAATTGCCAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGA                                                             <  SRR4302543.418197/94‑1 (MQ=60)

                                   GGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAACCTTTTCACAAGAA                                                            >  SRR4302543.4199158/1‑94 (MQ=60)

                                   GGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAA                                                            <  SRR4302543.3772185/94‑1 (MQ=60)

                                    GAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAAC                                                           <  SRR4302543.6681638/94‑1 (MQ=60)

                                    GAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAAC                                                           >  SRR4302543.2548156/1‑94 (MQ=60)

                                    GAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAAC                                                           <  SRR4302543.7018413/94‑1 (MQ=60)

                                    GAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAAC                                                           <  SRR4302543.6929936/94‑1 (MQ=60)

                                    GAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAAC                                                           <  SRR4302543.7018410/94‑1 (MQ=60)

                                    GAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAAC                                                           <  SRR4302543.2120034/94‑1 (MQ=60)

                                     GGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACG                                                          <  SRR4302543.2371429/94‑1 (MQ=60)

                                     AGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACG                                                          <  SRR4302543.1898187/94‑1 (MQ=60)

                                     AGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGACTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACG                                                          <  SRR4302543.1254894/94‑1 (MQ=60)

                                      GTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGC                                                         <  SRR4302543.1625972/94‑1 (MQ=60)

                                      GTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGC                                                         >  SRR4302543.154160/1‑94 (MQ=60)

                                       TGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCC                                                        >  SRR4302543.6923067/1‑94 (MQ=60)

                                       TGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCC                                                        <  SRR4302543.7754424/94‑1 (MQ=60)

                                       TGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCC                                                        <  SRR4302543.4760229/94‑1 (MQ=60)

                                       TGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCC                                                        <  SRR4302543.2035238/94‑1 (MQ=60)

                                         GGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACATTGGTGGCGTGTTGCAGGCGAAACTTTTCACAAAAACCCCGA                                                      >  SRR4302543.4740205/1‑94 (MQ=60)

                                         GGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGA                                                      <  SRR4302543.5347416/94‑1 (MQ=60)

                                         GGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGA                                                      >  SRR4302543.7257281/1‑94 (MQ=60)

                                           TTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGT                                                    <  SRR4302543.7960503/94‑1 (MQ=60)

                                            TTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTG                                                   <  SRR4302543.4866286/94‑1 (MQ=60)

                                             TGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGG                                                  >  SRR4302543.6652597/1‑94 (MQ=60)

                                             TGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGG                                                  <  SRR4302543.7579536/94‑1 (MQ=60)

                                             TGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGG                                                  >  SRR4302543.7383456/1‑94 (MQ=60)

                                             TGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGG                                                  >  SRR4302543.4536621/1‑94 (MQ=60)

                                              GCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGGGGGGT                                                 >  SRR4302543.5200303/1‑94 (MQ=60)

                                              GCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGT                                                 >  SRR4302543.5484268/1‑94 (MQ=60)

                                               CTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACTGGGGAGGTGGGATACCGGCGAACCTTTTCACAAGAACGCCGAGTGGTT                                                >  SRR4302543.2675840/1‑94 (MQ=60)

                                                TGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTT                                               >  SRR4302543.1169870/1‑94 (MQ=60)

                                                TGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTT                                               <  SRR4302543.213366/94‑1 (MQ=60)

                                                TGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTT                                               >  SRR4302543.2608512/1‑94 (MQ=60)

                                                TGATGTTTTTCTTGCGTGAAACGGCAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTT                                               <  SRR4302543.2926981/94‑1 (MQ=60)

                                                  ATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCA                                             >  SRR4302543.5879790/1‑94 (MQ=60)

                                                  ATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCA                                             <  SRR4302543.5021679/94‑1 (MQ=60)

                                                  ATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAATGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCA                                             <  SRR4302543.5504564/94‑1 (MQ=60)

                                                   TGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTAACAAGAACGCCGAGGGGTTTCAA                                            >  SRR4302543.1772206/1‑94 (MQ=60)

                                                    GTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAAC                                           <  SRR4302543.7823793/94‑1 (MQ=60)

                                                    GTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAAC                                           >  SRR4302543.6765611/1‑94 (MQ=60)

                                                     TTTTTCTTGCGTGAGACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACA                                          <  SRR4302543.2572229/94‑1 (MQ=60)

                                                       TTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATC                                        <  SRR4302543.6268883/94‑1 (MQ=60)

                                                       TTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATC                                        >  SRR4302543.4191666/1‑94 (MQ=60)

                                                       TTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATC                                        <  SRR4302543.1809283/94‑1 (MQ=60)

                                                        TTCTTTCCTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCT                                       <  SRR4302543.4310450/94‑1 (MQ=60)

                                                         TCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTT                                      >  SRR4302543.4932958/1‑94 (MQ=60)

                                                          CTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTT                                     <  SRR4302543.3895577/94‑1 (MQ=60)

                                                          CTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTT                                     >  SRR4302543.3447758/1‑94 (MQ=60)

                                                          CTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTT                                     >  SRR4302543.3837754/1‑94 (MQ=60)

                                                          CTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTT                                     <  SRR4302543.944202/94‑1 (MQ=60)

                                                          CTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTT                                     >  SRR4302543.4503003/1‑94 (MQ=60)

                                                          CTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTT                                     <  SRR4302543.5035406/94‑1 (MQ=60)

                                                          CTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTT                                     <  SRR4302543.5035407/94‑1 (MQ=60)

                                                          CTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTT                                     >  SRR4302543.1185033/1‑94 (MQ=60)

                                                             GCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACC                                  <  SRR4302543.2396353/94‑1 (MQ=60)

                                                             GCGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACC                                  <  SRR4302543.4995730/94‑1 (MQ=60)

                                                              CGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCA                                 <  SRR4302543.1960703/94‑1 (MQ=60)

                                                              CGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCA                                 >  SRR4302543.488144/1‑94 (MQ=60)

                                                              CGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCA                                 <  SRR4302543.324205/94‑1 (MQ=60)

                                                              CGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCA                                 <  SRR4302543.3388886/94‑1 (MQ=60)

                                                              CGTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGGGGTTTCAACATCTTTACCA                                 >  SRR4302543.243436/1‑94 (MQ=60)

                                                               GTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCAC                                <  SRR4302543.1825276/94‑1 (MQ=60)

                                                               GTGAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCAC                                >  SRR4302543.3138993/1‑94 (MQ=60)

                                                                 GAAACGGGAGCCTTCAACGAAATTGACAGTGGTGGGGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGT                              >  SRR4302543.1418903/1‑94 (MQ=60)

                                                                   AACGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCG                            >  SRR4302543.6764580/1‑94 (MQ=60)

                                                                     CGGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCT                          >  SRR4302543.1733756/1‑94 (MQ=60)

                                                                      GGGAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTC                         >  SRR4302543.7511544/1‑94 (MQ=60)

                                                                        GAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCG                       <  SRR4302543.2067563/94‑1 (MQ=60)

                                                                        GAGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCG                       <  SRR4302543.5438621/94‑1 (MQ=60)

                                                                         AGCCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGG                      <  SRR4302543.2779616/94‑1 (MQ=60)

                                                                         AGCCTTCAACGAAATTGACAGTGGTGGTGGGACGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGG                      >  SRR4302543.617384/1‑94 (MQ=60)

                                                                           CCTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGAT                    >  SRR4302543.4640301/1‑94 (MQ=60)

                                                                            CTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATG                   <  SRR4302543.385210/94‑1 (MQ=60)

                                                                            CTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATG                   <  SRR4302543.7052285/94‑1 (MQ=60)

                                                                            CTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATG                   >  SRR4302543.7366241/1‑94 (MQ=60)

                                                                            CTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATG                   <  SRR4302543.2350689/94‑1 (MQ=60)

                                                                            CTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATG                   <  SRR4302543.7542530/94‑1 (MQ=60)

                                                                            CTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATG                   >  SRR4302543.4941429/1‑94 (MQ=60)

                                                                            CTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATG                   >  SRR4302543.6523896/1‑94 (MQ=60)

                                                                            CTTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATA                   >  SRR4302543.3917453/1‑94 (MQ=60)

                                                                             TTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGA                  >  SRR4302543.1577819/1‑94 (MQ=60)

                                                                             TTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGA                  >  SRR4302543.807001/1‑94 (MQ=60)

                                                                             TTCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGA                  >  SRR4302543.2096497/1‑94 (MQ=60)

                                                                              TCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGAC                 <  SRR4302543.463101/94‑1 (MQ=60)

                                                                              TCAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGAC                 <  SRR4302543.7332525/94‑1 (MQ=60)

                                                                               CAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACG                >  SRR4302543.5621780/1‑94 (MQ=60)

                                                                               CAACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACG                <  SRR4302543.3041260/94‑1 (MQ=60)

                                                                               CAACGAAATTGACAGTGGTGGGGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACG                >  SRR4302543.2559439/1‑94 (MQ=60)

                                                                               CAACGAAATTGACAGTGGAGGTGGGATGCCGGCGAAACTTTTCTCAAGACCGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCAGGAAGACG                >  SRR4302543.620591/1‑94 (MQ=60)

                                                                                AACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGT               <  SRR4302543.1926879/94‑1 (MQ=60)

                                                                                AACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGT               >  SRR4302543.515644/1‑94 (MQ=60)

                                                                                AACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGT               >  SRR4302543.515645/1‑94 (MQ=60)

                                                                                 ACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTA              <  SRR4302543.5896537/94‑1 (MQ=60)

                                                                                 ACGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTA              <  SRR4302543.2880147/94‑1 (MQ=60)

                                                                                  CGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAA             >  SRR4302543.3440770/1‑94 (MQ=60)

                                                                                  CGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAA             >  SRR4302543.7048987/1‑94 (MQ=60)

                                                                                  AGAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAA             <  SRR4302543.2104064/94‑1 (MQ=60)

                                                                                   GAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAAT            <  SRR4302543.7840049/94‑1 (MQ=60)

                                                                                   GAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAAT            >  SRR4302543.1985078/1‑94 (MQ=60)

                                                                                   GAAATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAAT            <  SRR4302543.4041312/94‑1 (MQ=60)

                                                                                      ATTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAA         <  SRR4302543.7604150/94‑1 (MQ=60)

                                                                                       TTGACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAAT        <  SRR4302543.6583187/94‑1 (MQ=60)

                                                                                         GACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAATAA      <  SRR4302543.4121460/94‑1 (MQ=60)

                                                                                         GACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAATAA      <  SRR4302543.1872506/94‑1 (MQ=60)

                                                                                         GACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAATAA      <  SRR4302543.800547/94‑1 (MQ=60)

                                                                                          ACAGTGGTGGTGGGGTGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAATAAG     >  SRR4302543.4143809/1‑94 (MQ=60)

                                                                                          ACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAATAAG     <  SRR4302543.533201/94‑1 (MQ=60)

                                                                                          ACAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAATAAG     <  SRR4302543.513375/94‑1 (MQ=60)

                                                                                           CAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCGGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAATAAGC    <  SRR4302543.4814005/94‑1 (MQ=60)

                                                                                           CAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAATAAGC    <  SRR4302543.3772099/94‑1 (MQ=60)

                                                                                           CAGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAATAAGC    <  SRR4302543.3926214/94‑1 (MQ=60)

                                                                                            AGTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAATAAGCG   >  SRR4302543.1659095/1‑94 (MQ=60)

                                                                                             GTGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAATAAGCGC  <  SRR4302543.6444675/94‑1 (MQ=60)

CCTGCCGCCTTTGGTGGCAACAAGTTTTGAAAAGTGGAGTGGGTTTGCTGATGTTTTTCTTGCGTGAAACGGGAGCCTTCAACGAAATTGACAATGGTGGTGGGATGCAGGCGAAACTTTTCACAAGAACGCCGAGTGGTTTCAACATCTTTACCACGTCGCTCCGGATGACGTAATAAATAAGCGC  >  NC_000913/4043536‑4043722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`