Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,052,844	T→C	I5M (ATA→ATG)	glnG ←	GlnG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,052,844	0	T	C	98.1%	1142.4 / 3.3	376	I5M (ATA→ATG)	glnG	GlnG
Reads supporting (aligned to +/- strand): ref base T (1/6); new base C (167/202); total (168/208)
Fisher's exact test for biased strand distribution p-value = 1.36e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.03e-01

Only 100 of 388 total aligned reads displayed.

GTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATT  >  NC_000913/4052754‑4052933

gTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCAt                                                                                         >  1:6452515/1‑93 (MQ=255)

gTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCAt                                                                                         <  1:2809978/93‑1 (MQ=255)

 ttCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATc                                                                                        >  1:1855924/1‑93 (MQ=255)

   ctcAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATccc                                                                                      >  1:315480/1‑93 (MQ=255)

   ctcAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATccc                                                                                      >  2:7933707/1‑93 (MQ=255)

    tcAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCt                                                                                     >  1:7056418/1‑93 (MQ=255)

    tcAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCt                                                                                     >  1:4874216/1‑93 (MQ=255)

     cAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTc                                                                                    <  1:5550914/93‑1 (MQ=255)

     cAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTc                                                                                    >  2:2220337/1‑93 (MQ=255)

      aaaCGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCg                                                                                   >  1:5075698/1‑93 (MQ=255)

        aCGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGtt                                                                                 >  1:5010199/1‑93 (MQ=255)

          gtcgtACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTga                                                                               >  2:6066188/1‑92 (MQ=255)

          gtcgtACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGc                                                                               >  2:3926962/1‑93 (MQ=255)

          gtcgtACAGATTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGc                                                                               <  2:7565187/93‑1 (MQ=255)

           tcgtACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCa                                                                              >  1:2105923/1‑93 (MQ=255)

             gtACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATa                                                                            >  1:6007071/1‑93 (MQ=255)

             gtACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCAACATCGACTACCCAGCCCATCCCTCGATGCATa                                                                            >  2:4040528/1‑93 (MQ=255)

              tACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATaa                                                                           >  1:7204032/1‑93 (MQ=255)

               aCAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATaaa                                                                          <  2:82811/93‑1 (MQ=255)

               aCAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATaaa                                                                          <  1:3863772/93‑1 (MQ=255)

                cAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAAc                                                                         <  2:7458559/93‑1 (MQ=255)

                cAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTAATCGACTACCCAGACCATCCGTCGTTGCATaaag                                                                         >  1:5428422/1‑92 (MQ=255)

                  ggTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGt                                                                       >  2:1542244/1‑93 (MQ=255)

                    ttAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCa                                                                     <  2:7646393/93‑1 (MQ=255)

                    ttAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCa                                                                     <  2:6851008/93‑1 (MQ=255)

                      aaaCCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCAcc                                                                   <  1:5271061/93‑1 (MQ=255)

                          cTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTa                                                               <  1:6089576/93‑1 (MQ=255)

                          cTGCCCAAGAGAGCGCACGTTCAAGCACCCACCGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTa                                                               <  2:5419669/93‑1 (MQ=255)

                           tGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACTCAGACCATCCCTCGTTGCATAAACGTCACCTTTAt                                                              >  2:26312/1‑93 (MQ=255)

                           tGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTAt                                                              >  2:4629769/1‑93 (MQ=255)

                            ggcccAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTAtt                                                             <  1:1230902/91‑1 (MQ=255)

                               ccAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTcc                                                          <  1:2943703/93‑1 (MQ=255)

                                cAGCGAGCGCACGTTCAAGCACCCAACGGATGGTACTATCGTCATCGACTACCCAGACAATCCCTCGTTGCATAAACGTCACCTTTATTTCCt                                                         >  2:6749419/1‑93 (MQ=255)

                                cAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCt                                                         <  2:431609/93‑1 (MQ=255)

                                 agcgagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTg                                                        <  1:7324712/93‑1 (MQ=255)

                                 agcgagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTg                                                        >  2:1355481/1‑93 (MQ=255)

                                  gcgagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGa                                                       >  2:6472697/1‑93 (MQ=255)

                                   cgagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGAt                                                      <  1:1051156/93‑1 (MQ=255)

                                    gagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATa                                                     <  1:5212090/93‑1 (MQ=255)

                                    gagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATa                                                     <  1:4197009/93‑1 (MQ=255)

                                    gagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATa                                                     <  1:5883866/93‑1 (MQ=255)

                                    gagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATa                                                     <  1:951756/93‑1 (MQ=255)

                                    gagcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATa                                                     <  2:4824921/93‑1 (MQ=255)

                                     agcgCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAg                                                    <  1:7859596/93‑1 (MQ=255)

                                        gcACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCa                                                 <  1:1172934/93‑1 (MQ=255)

                                         cACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAg                                                <  1:3452483/93‑1 (MQ=255)

                                          aCGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAgg                                               <  2:1026924/93‑1 (MQ=255)

                                           cGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGt                                              >  2:7279606/1‑93 (MQ=255)

                                            gTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTa                                             >  2:1743009/1‑93 (MQ=255)

                                            gTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTa                                             <  2:1424520/93‑1 (MQ=255)

                                             ttCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTaa                                            >  2:5469618/1‑93 (MQ=255)

                                              tCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTaaa                                           >  2:4233554/1‑93 (MQ=255)

                                               cAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCCCCTTTATTCCCTGATAGGCAGGTAAAc                                          <  1:847530/93‑1 (MQ=255)

                                               cAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAAc                                          <  1:4015706/93‑1 (MQ=255)

                                                aaGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAAcc                                         >  1:3698305/1‑93 (MQ=255)

                                                 aGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCg                                        <  2:7372537/93‑1 (MQ=255)

                                                   cACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCgag                                      <  2:5603714/93‑1 (MQ=255)

                                                    aCCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCgaga                                     >  1:2173207/1‑93 (MQ=255)

                                                     cccAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGaa                                    >  1:1931029/1‑93 (MQ=255)

                                                      ccAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAAc                                   <  1:3544837/93‑1 (MQ=255)

                                                        agcGGATGGAACGATCGTCATCGACTGCCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTc                                 <  1:7559642/91‑1 (MQ=255)

                                                        aaCGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTc                                 <  1:2412516/93‑1 (MQ=255)

                                                        aaCGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTc                                 >  1:1288753/1‑93 (MQ=255)

                                                          cGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCgg                               >  2:2884099/1‑93 (MQ=255)

                                                          cGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCgg                               >  1:3277002/1‑93 (MQ=255)

                                                           ggATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGt                              <  2:4544/93‑1 (MQ=255)

                                                            gATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTa                             <  2:7792584/93‑1 (MQ=255)

                                                            gATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTa                             <  1:4561690/93‑1 (MQ=255)

                                                            gATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTa                             <  2:4942824/93‑1 (MQ=255)

                                                             aTGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTAt                            >  2:6596556/1‑93 (MQ=255)

                                                             aTGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTAt                            <  1:5309984/93‑1 (MQ=255)

                                                             aTGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTAt                            >  1:4736974/1‑93 (MQ=255)

                                                                gAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGcc                         >  1:249719/1‑93 (MQ=255)

                                                                 aaCTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGccc                        <  1:6954260/93‑1 (MQ=255)

                                                                 aaCTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGccc                        <  1:1747497/93‑1 (MQ=255)

                                                                 aaCTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGccc                        >  2:5256338/1‑93 (MQ=255)

                                                                   cTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTg                      <  1:6637293/93‑1 (MQ=255)

                                                                   cTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTg                      <  1:6393229/93‑1 (MQ=255)

                                                                   cTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTg                      <  2:3658195/93‑1 (MQ=255)

                                                                   cTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTg                      <  1:621955/93‑1 (MQ=255)

                                                                   cTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGATATGCCCTg                      >  2:4363481/1‑93 (MQ=255)

                                                                    tATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTgg                     >  2:7195346/1‑93 (MQ=255)

                                                                     aTCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGc                    >  2:6950184/1‑93 (MQ=255)

                                                                       cGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCa                  >  2:1925492/1‑93 (MQ=255)

                                                                       cGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCa                  >  2:328816/1‑93 (MQ=255)

                                                                        gTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCaa                 <  1:2253586/93‑1 (MQ=255)

                                                                         tCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAAc                <  2:3087326/93‑1 (MQ=255)

                                                                           aTCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTg              >  1:7748534/1‑93 (MQ=255)

                                                                           aTCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTg              <  1:746699/93‑1 (MQ=255)

                                                                               aCTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTCCCTGATAGTCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTaa          <  2:243756/93‑1 (MQ=255)

                                                                               aCTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTaa          <  1:819151/93‑1 (MQ=255)

                                                                               aCTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGACAGGCAGGTAAACCGAGAACTCGGTATGCCGTGGCCAACTGGGaa          >  1:4265115/1‑93 (MQ=255)

                                                                                 tACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAAt        >  2:3470585/1‑93 (MQ=255)

                                                                                 tACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAAt        <  2:5770478/93‑1 (MQ=255)

                                                                                 tACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAAt        >  1:4498521/1‑93 (MQ=255)

                                                                                  aCCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAAtt       <  1:1555795/93‑1 (MQ=255)

                                                                                   cccAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGACCTCGGTATGCCCTGGCCAACTGGTAAATTc      <  2:7091411/93‑1 (MQ=255)

                                                                                    ccAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCa     <  2:3576651/93‑1 (MQ=255)

                                                                                     cAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCaa    <  1:3627522/93‑1 (MQ=255)

                                                                                      aGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAAt   <  1:5651914/93‑1 (MQ=255)

GTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATT  >  NC_000913/4052754‑4052933

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 222 total aligned reads displayed.

GCCGTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATTTT  >  NC_000913/4052751‑4052935

GCCGTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACC                                                                                             >  SRR4302543.3579190/1‑94 (MQ=60)

  CGTTCTCAAACGTCGTACAGGTTAACCCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCAT                                                                                           <  SRR4302543.5475880/94‑1 (MQ=60)

  CGTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCAT                                                                                           <  SRR4302543.1116723/94‑1 (MQ=60)

  CGTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCAT                                                                                           >  SRR4302543.7520246/1‑94 (MQ=60)

  CGTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCAT                                                                                           >  SRR4302543.6513321/1‑94 (MQ=60)

  CGTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCAT                                                                                           >  SRR4302543.366140/1‑94 (MQ=60)

   GTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCTAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATC                                                                                          >  SRR4302543.1392565/1‑94 (MQ=60)

   GTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGCCCATC                                                                                          >  SRR4302543.2373731/1‑94 (MQ=60)

   GTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATC                                                                                          >  SRR4302543.1872608/1‑94 (MQ=60)

   GTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATC                                                                                          >  SRR4302543.5282984/1‑94 (MQ=60)

   GTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATC                                                                                          >  SRR4302543.7034282/1‑94 (MQ=60)

   GTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATC                                                                                          <  SRR4302543.2835700/94‑1 (MQ=60)

     TCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCC                                                                                        >  SRR4302543.1751735/1‑94 (MQ=60)

     TCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCC                                                                                        <  SRR4302543.5193645/94‑1 (MQ=60)

     TCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCC                                                                                        >  SRR4302543.318330/1‑94 (MQ=60)

      CTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCT                                                                                       >  SRR4302543.7124896/1‑94 (MQ=60)

      CTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCT                                                                                       >  SRR4302543.4918646/1‑94 (MQ=60)

       TCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTC                                                                                      <  SRR4302543.2284507/94‑1 (MQ=60)

       TCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTC                                                                                      >  SRR4302543.3475222/1‑94 (MQ=60)

       TCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTC                                                                                      >  SRR4302543.1248914/1‑94 (MQ=60)

        CAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCG                                                                                     >  SRR4302543.5121754/1‑94 (MQ=60)

        CAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCG                                                                                     <  SRR4302543.5601394/94‑1 (MQ=60)

         AAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCACGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGT                                                                                    >  SRR4302543.7877598/1‑94 (MQ=60)

          AACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTT                                                                                   >  SRR4302543.5055794/1‑94 (MQ=60)

           ACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTG                                                                                  <  SRR4302543.1978879/94‑1 (MQ=60)

           ACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTG                                                                                  <  SRR4302543.7842994/94‑1 (MQ=60)

            CGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGC                                                                                 >  SRR4302543.3603708/1‑94 (MQ=60)

             GTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCA                                                                                <  SRR4302543.4936147/94‑1 (MQ=60)

             GTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCA                                                                                >  SRR4302543.2124765/1‑94 (MQ=60)

               CGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATA                                                                              >  SRR4302543.6062384/1‑94 (MQ=60)

               CGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATA                                                                              >  SRR4302543.6062385/1‑94 (MQ=60)

               CGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATA                                                                              <  SRR4302543.2458579/94‑1 (MQ=60)

                GTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATTCCTCGTTGCATAA                                                                             >  SRR4302543.7061142/1‑94 (MQ=60)

                GTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAA                                                                             <  SRR4302543.7306937/94‑1 (MQ=60)

                GTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAA                                                                             >  SRR4302543.7554575/1‑94 (MQ=60)

                GTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAA                                                                             >  SRR4302543.3509891/1‑94 (MQ=60)

                GTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAA                                                                             >  SRR4302543.7273879/1‑94 (MQ=60)

                 TACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAA                                                                            >  SRR4302543.6196869/1‑94 (MQ=60)

                  ACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAAC                                                                           >  SRR4302543.5477895/1‑94 (MQ=60)

                  ACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAAC                                                                           <  SRR4302543.4585037/94‑1 (MQ=60)

                  ACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAAC                                                                           <  SRR4302543.3897903/94‑1 (MQ=60)

                  ACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTAATCGACTACCCAGACCATCCGTCGTTGCATAAAG                                                                           >  SRR4302543.5477753/1‑94 (MQ=60)

                   CAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACG                                                                          <  SRR4302543.5351200/94‑1 (MQ=60)

                    AGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGT                                                                         >  SRR4302543.6600640/1‑94 (MQ=60)

                    AGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGT                                                                         <  SRR4302543.4635063/94‑1 (MQ=60)

                     GGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTC                                                                        >  SRR4302543.6233720/1‑94 (MQ=60)

                     GGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTC                                                                        >  SRR4302543.3910486/1‑94 (MQ=60)

                      GTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCA                                                                       >  SRR4302543.6114428/1‑94 (MQ=60)

                       TTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCAC                                                                      <  SRR4302543.3976085/94‑1 (MQ=60)

                       TTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCAC                                                                      <  SRR4302543.5476741/94‑1 (MQ=60)

                        TAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCAat                                                                     >  SRR4302543.4284394/1‑92 (MQ=60)

                        TAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACC                                                                     <  SRR4302543.758736/94‑1 (MQ=60)

                        TAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACC                                                                     >  SRR4302543.4284393/1‑94 (MQ=60)

                        TAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACC                                                                     <  SRR4302543.7562316/94‑1 (MQ=60)

                        TAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACC                                                                     <  SRR4302543.240887/94‑1 (MQ=60)

                         AAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCTAGACCATCCCTCGTTGCATAAACGTCACCT                                                                    >  SRR4302543.7312244/1‑94 (MQ=60)

                         AAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCT                                                                    <  SRR4302543.5318614/94‑1 (MQ=60)

                          AACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTT                                                                   >  SRR4302543.5829219/1‑94 (MQ=60)

                          AACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTT                                                                   <  SRR4302543.5947999/94‑1 (MQ=60)

                           ACCTGCCCCAGCGAGCGCACGTTCAAGCCCCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTT                                                                  <  SRR4302543.1932991/94‑1 (MQ=60)

                            CCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTA                                                                 <  SRR4302543.1806760/94‑1 (MQ=60)

                             CTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTAT                                                                >  SRR4302543.7726027/1‑94 (MQ=60)

                             CTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTAT                                                                <  SRR4302543.3188647/94‑1 (MQ=60)

                             CTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTAT                                                                <  SRR4302543.931347/94‑1 (MQ=60)

                             CTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTAT                                                                <  SRR4302543.1918906/94‑1 (MQ=60)

                             CTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTAT                                                                <  SRR4302543.6147295/94‑1 (MQ=60)

                              TGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATT                                                               <  SRR4302543.4366864/94‑1 (MQ=60)

                              TGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATT                                                               >  SRR4302543.376753/1‑94 (MQ=60)

                               GGCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTT                                                              <  SRR4302543.1241963/94‑1 (MQ=60)

                                 CCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCC                                                            >  SRR4302543.6504651/1‑94 (MQ=60)

                                 CCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCC                                                            <  SRR4302543.7377539/94‑1 (MQ=60)

                                 CCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCC                                                            >  SRR4302543.2061628/1‑94 (MQ=60)

                                  CCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCT                                                           <  SRR4302543.2970431/94‑1 (MQ=60)

                                  CCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCT                                                           <  SRR4302543.3987646/94‑1 (MQ=60)

                                   CAGCGAGCACACGCTCAAGCACCCAACGGATGGAACTATCGTCATTGACTACCCAGGCCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTG                                                          <  SRR4302543.7507824/94‑1 (MQ=60)

                                     GCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGAT                                                        <  SRR4302543.280946/94‑1 (MQ=60)

                                      CGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATA                                                       >  SRR4302543.6069500/1‑94 (MQ=60)

                                      CGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATA                                                       >  SRR4302543.1575341/1‑94 (MQ=60)

                                      CGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATA                                                       <  SRR4302543.89458/94‑1 (MQ=60)

                                      CGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATA                                                       <  SRR4302543.1060567/94‑1 (MQ=60)

                                       GAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAG                                                      <  SRR4302543.5259051/94‑1 (MQ=60)

                                       GAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAG                                                      <  SRR4302543.4235059/94‑1 (MQ=60)

                                       GAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAG                                                      <  SRR4302543.5142157/94‑1 (MQ=60)

                                       GAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAG                                                      <  SRR4302543.5937491/94‑1 (MQ=60)

                                       GAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAG                                                      <  SRR4302543.1178144/94‑1 (MQ=60)

                                       GAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAG                                                      <  SRR4302543.960071/94‑1 (MQ=60)

                                       GAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAG                                                      <  SRR4302543.957349/94‑1 (MQ=60)

                                        AGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGG                                                     <  SRR4302543.7933631/94‑1 (MQ=60)

                                        AGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGG                                                     <  SRR4302543.3144368/94‑1 (MQ=60)

                                          CGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCA                                                   <  SRR4302543.3850043/94‑1 (MQ=60)

                                          CGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCA                                                   <  SRR4302543.4829723/94‑1 (MQ=60)

                                          CGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCA                                                   <  SRR4302543.5641988/94‑1 (MQ=60)

                                           GCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAG                                                  >  SRR4302543.985024/1‑94 (MQ=60)

                                           GCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAG                                                  <  SRR4302543.1183571/94‑1 (MQ=60)

                                            CACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGG                                                 <  SRR4302543.5110445/94‑1 (MQ=60)

                                            CACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGG                                                 <  SRR4302543.3483399/94‑1 (MQ=60)

                                             ACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGT                                                <  SRR4302543.3234410/94‑1 (MQ=60)

                                              CGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTA                                               >  SRR4302543.2205012/1‑94 (MQ=60)

                                              CGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTA                                               >  SRR4302543.2130589/1‑94 (MQ=60)

                                               GTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCGTGATAGGCAGGTAA                                              >  SRR4302543.527197/1‑94 (MQ=60)

                                               GTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAA                                              >  SRR4302543.820791/1‑94 (MQ=60)

                                               GTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAA                                              >  SRR4302543.5026799/1‑94 (MQ=60)

                                                 TCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAAC                                            <  SRR4302543.1237890/94‑1 (MQ=60)

                                                 TCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAAC                                            <  SRR4302543.1237889/94‑1 (MQ=60)

                                                  CAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCCCCTTTATTCCCTGATAGGCAGGTAAACC                                           <  SRR4302543.855043/94‑1 (MQ=60)

                                                  CAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACC                                           <  SRR4302543.1880187/94‑1 (MQ=60)

                                                  CAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACC                                           >  SRR4302543.3730819/1‑94 (MQ=60)

                                                  CAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACC                                           <  SRR4302543.431980/94‑1 (MQ=60)

                                                  CAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACC                                           <  SRR4302543.4051571/94‑1 (MQ=60)

                                                   AAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCG                                          <  SRR4302543.2918286/94‑1 (MQ=60)

                                                   AAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCG                                          >  SRR4302543.2201329/1‑94 (MQ=60)

                                                    AGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATACACGTCACCTTTATTTCCTGCTAGGCAGGTAAgccgc                                         >  SRR4302543.2766143/1‑89 (MQ=60)

                                                    AGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGA                                         <  SRR4302543.4145198/94‑1 (MQ=60)

                                                     GCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAG                                        <  SRR4302543.6629123/94‑1 (MQ=60)

                                                      CACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGA                                       >  SRR4302543.2192676/1‑94 (MQ=60)

                                                      CACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGA                                       >  SRR4302543.7235516/1‑94 (MQ=60)

                                                       ACCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAA                                      >  SRR4302543.1948404/1‑94 (MQ=60)

                                                        CCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAAC                                     <  SRR4302543.5690807/94‑1 (MQ=60)

                                                        CCCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAAC                                     <  SRR4302543.7231321/94‑1 (MQ=60)

                                                         CCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACT                                    <  SRR4302543.3576319/94‑1 (MQ=60)

                                                         CCAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACT                                    >  SRR4302543.1581352/1‑94 (MQ=60)

                                                          CAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTC                                   >  SRR4302543.2897585/1‑94 (MQ=60)

                                                          CAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTC                                   <  SRR4302543.3645708/94‑1 (MQ=60)

                                                          CAACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTC                                   >  SRR4302543.1300232/1‑94 (MQ=60)

                                                           AGCGGATGGAACGATCGTCATCGACTGCCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCG                                  <  SRR4302543.7631609/94‑1 (MQ=60)

                                                           AACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCG                                  <  SRR4302543.5510181/94‑1 (MQ=60)

                                                           AACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCG                                  <  SRR4302543.2434317/94‑1 (MQ=60)

                                                           AACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCG                                  <  SRR4302543.6962927/94‑1 (MQ=60)

                                                            ACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGG                                 >  SRR4302543.3306596/1‑94 (MQ=60)

                                                            ACGGATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGG                                 <  SRR4302543.1189588/94‑1 (MQ=60)

                                                               GATGTAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTAT                              <  SRR4302543.3326988/94‑1 (MQ=60)

                                                               GATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTAT                              <  SRR4302543.5338674/94‑1 (MQ=60)

                                                               GATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTAT                              <  SRR4302543.3098457/94‑1 (MQ=60)

                                                               GATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTAT                              <  SRR4302543.565127/94‑1 (MQ=60)

                                                               GATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTAT                              >  SRR4302543.4780263/1‑94 (MQ=60)

                                                               GATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTAT                              <  SRR4302543.4603209/94‑1 (MQ=60)

                                                               GATGGAACTATCGTCATCGACTACCCAGACCATCACTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTAT                              <  SRR4302543.4879317/94‑1 (MQ=60)

                                                                ATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATG                             <  SRR4302543.5357943/94‑1 (MQ=60)

                                                                ATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATG                             <  SRR4302543.5290985/94‑1 (MQ=60)

                                                                ATGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATG                             >  SRR4302543.3610660/1‑94 (MQ=60)

                                                                 TGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAGCCGAGAACTCGGTATGC                            <  SRR4302543.6076289/94‑1 (MQ=60)

                                                                 TGGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGC                            >  SRR4302543.5014494/1‑94 (MQ=60)

                                                                  GGAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCC                           >  SRR4302543.251890/1‑94 (MQ=60)

                                                                   GAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCC                          >  SRR4302543.6060551/1‑94 (MQ=60)

                                                                   GAACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCC                          <  SRR4302543.6357976/94‑1 (MQ=60)

                                                                    AACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCT                         <  SRR4302543.5080532/94‑1 (MQ=60)

                                                                    AACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCT                         <  SRR4302543.7019680/94‑1 (MQ=60)

                                                                    AACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCT                         <  SRR4302543.3486875/94‑1 (MQ=60)

                                                                    AACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCT                         <  SRR4302543.5837192/94‑1 (MQ=60)

                                                                    AACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTACACCCT                         >  SRR4302543.2258404/1‑94 (MQ=60)

                                                                    AACTATCGTCATCGACTACCCAGACCATACCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAATCGAGAACTCGGagtgacct                         >  SRR4302543.2018833/1‑86 (MQ=60)

                                                                     ACTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTG                        >  SRR4302543.2494003/1‑94 (MQ=60)

                                                                      CTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGG                       <  SRR4302543.6699923/94‑1 (MQ=60)

                                                                      CTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGG                       <  SRR4302543.6453413/94‑1 (MQ=60)

                                                                      CTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGG                       <  SRR4302543.6453412/94‑1 (MQ=60)

                                                                      CTATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGG                       <  SRR4302543.627650/94‑1 (MQ=60)

                                                                       TATCGTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGC                      <  SRR4302543.842407/94‑1 (MQ=60)

                                                                           GTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAAC                  >  SRR4302543.3665885/1‑94 (MQ=60)

                                                                           GTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAAC                  >  SRR4302543.5192962/1‑94 (MQ=60)

                                                                           GTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAAC                  >  SRR4302543.6359949/1‑94 (MQ=60)

                                                                           GTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAAC                  >  SRR4302543.214875/1‑94 (MQ=60)

                                                                           GTCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAAC                  <  SRR4302543.4582925/94‑1 (MQ=60)

                                                                            TCATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACT                 <  SRR4302543.7425628/94‑1 (MQ=60)

                                                                             CATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTG                >  SRR4302543.4760187/1‑94 (MQ=60)

                                                                             CATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTG                <  SRR4302543.134731/94‑1 (MQ=60)

                                                                             CATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTG                >  SRR4302543.1531316/1‑94 (MQ=60)

                                                                             CATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTG                >  SRR4302543.7821709/1‑94 (MQ=60)

                                                                             CATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTG                >  SRR4302543.476683/1‑94 (MQ=60)

                                                                             CATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTG                <  SRR4302543.1764670/94‑1 (MQ=60)

                                                                              ATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGG               <  SRR4302543.753338/94‑1 (MQ=60)

                                                                              ATCGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGG               <  SRR4302543.7965572/94‑1 (MQ=60)

                                                                                CGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTA             <  SRR4302543.7793473/94‑1 (MQ=60)

                                                                                CGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTA             <  SRR4302543.2866727/94‑1 (MQ=60)

                                                                                CGACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTA             >  SRR4302543.4152771/1‑94 (MQ=60)

                                                                                 GACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTCA            >  SRR4302543.4303853/1‑94 (MQ=60)

                                                                                 GACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAA            >  SRR4302543.3185844/1‑94 (MQ=60)

                                                                                 GACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAA            >  SRR4302543.6700727/1‑94 (MQ=60)

                                                                                 GACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGACAGGCAGGTAAACCGAGAACTCGGTATGCCGTGGCCAACTGGGAA            >  SRR4302543.4303854/1‑94 (MQ=60)

                                                                                  ACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAA           >  SRR4302543.1859208/1‑94 (MQ=60)

                                                                                  ACTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAA           >  SRR4302543.6919869/1‑94 (MQ=60)

                                                                                   CTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAAT          <  SRR4302543.8000586/94‑1 (MQ=60)

                                                                                   CTACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAAT          >  SRR4302543.4539408/1‑94 (MQ=60)

                                                                                    TACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATT         <  SRR4302543.3027395/94‑1 (MQ=60)

                                                                                    TACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATT         <  SRR4302543.1264629/94‑1 (MQ=60)

                                                                                     ACCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTC        <  SRR4302543.1569699/94‑1 (MQ=60)

                                                                                      CCCAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCA       >  SRR4302543.6472171/1‑94 (MQ=60)

                                                                                        CAGACCATCCCTCGTTGCATAATCGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAAT     <  SRR4302543.721976/94‑1 (MQ=60)

                                                                                        CAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAAT     <  SRR4302543.84602/94‑1 (MQ=60)

                                                                                        CAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAAT     <  SRR4302543.2465013/94‑1 (MQ=60)

                                                                                        CAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAAT     <  SRR4302543.84604/94‑1 (MQ=60)

                                                                                        CAGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAAT     <  SRR4302543.3659469/94‑1 (MQ=60)

                                                                                         AGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATT    <  SRR4302543.3869817/94‑1 (MQ=60)

                                                                                         AGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATT    >  SRR4302543.5423279/1‑94 (MQ=60)

                                                                                         AGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATT    <  SRR4302543.5703443/94‑1 (MQ=60)

                                                                                         AGACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATT    <  SRR4302543.1091897/94‑1 (MQ=60)

                                                                                          GACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATTT   >  SRR4302543.7447919/1‑94 (MQ=60)

                                                                                           ACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATTTT  <  SRR4302543.7385186/94‑1 (MQ=60)

                                                                                           ACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATTTT  <  SRR4302543.494955/94‑1 (MQ=60)

                                                                                           ACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATTTT  <  SRR4302543.494956/94‑1 (MQ=60)

                                                                                           ACCATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATTTT  <  SRR4302543.5772941/94‑1 (MQ=60)

GCCGTTCTCAAACGTCGTACAGGTTAAACCTGCCCCAGCGAGCGCACGTTCAAGCACCCAACGGATGGAACTATCGTCATCGACTACCCAGACTATCCCTCGTTGCATAAACGTCACCTTTATTTCCTGATAGGCAGGTAAACCGAGAACTCGGTATGCCCTGGCCAACTGGTAAATTCAATTTT  >  NC_000913/4052751‑4052935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`