Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,060,112	A→G	Y96C (TAT→TGT)	yihN →	putative resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,060,112	0	A	G	99.7%	1142.4 / ‑6.3	371	Y96C (TAT→TGT)	yihN	putative resistance protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (181/189); total (182/189)
Fisher's exact test for biased strand distribution p-value = 4.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 389 total aligned reads displayed.

TTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTATTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGG  >  NC_000913/4060022‑4060201

ttGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGtt                                                                                         <  2:3050905/93‑1 (MQ=255)

 tGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCAACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTg                                                                                        <  1:3320913/93‑1 (MQ=255)

  gCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTgg                                                                                       <  1:6634389/93‑1 (MQ=255)

  gCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTgg                                                                                       <  1:1968903/93‑1 (MQ=255)

  gCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTgg                                                                                       <  2:196369/93‑1 (MQ=255)

     gATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGc                                                                                    >  1:1441999/1‑93 (MQ=255)

     gATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGc                                                                                    >  2:374034/1‑93 (MQ=255)

      aTAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCa                                                                                   >  1:4280065/1‑93 (MQ=255)

       tAACCTCCCGCGCCGATACACCATGTCATTCACCCTCCTTGCGACAGCATTACTTGGAGTTTATGTGACGCCAATGCCGGGCTGTTGGGGCac                                                                                  >  2:4784039/1‑92 (MQ=255)

       tAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCAt                                                                                  >  1:1076285/1‑93 (MQ=255)

       tAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCAt                                                                                  >  1:6882/1‑93 (MQ=255)

       tAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCAt                                                                                  <  1:5258916/93‑1 (MQ=255)

       tAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTATTGGGGCAt                                                                                  >  2:5518978/1‑93 (MQ=255)

        aaaCTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATc                                                                                 >  1:7717297/1‑93 (MQ=255)

         aaCTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATcc                                                                                <  2:3347815/93‑1 (MQ=255)

          aCTACCGCGCAGATACACCATGTCATTCTCACTCCTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCct                                                                               >  2:467999/1‑93 (MQ=255)

          aCTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGGATCct                                                                               >  2:6083259/1‑93 (MQ=255)

          aCTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTCGGGGCATCct                                                                               >  1:5008930/1‑93 (MQ=255)

            tACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCctct                                                                             >  1:4593913/1‑93 (MQ=255)

            tACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCctct                                                                             >  1:4726481/1‑93 (MQ=255)

             aCCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCtt                                                                            <  2:1232576/93‑1 (MQ=255)

              ccGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCttt                                                                           <  2:3794483/93‑1 (MQ=255)

              ccGCGCAGATACACCATGTCACTCTCACTCATTGCGATAGGATTTCTGGGTGTCAATTTGTCGACAATGCCGGGGTGTTGGTGCTTCCTCgtt                                                                           >  2:7022518/1‑93 (MQ=255)

               cgcgCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTg                                                                          >  1:1716977/1‑93 (MQ=255)

                  gcAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCt                                                                       <  2:6726167/93‑1 (MQ=255)

                  gcAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCt                                                                       >  2:3522816/1‑93 (MQ=255)

                  ccAGATACACCATGTCATTCTCGCTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCt                                                                       <  2:2085062/92‑1 (MQ=255)

                   cAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTg                                                                      >  1:286896/1‑93 (MQ=255)

                   cAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTg                                                                      <  2:6236740/93‑1 (MQ=255)

                   cAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTg                                                                      <  2:5927795/93‑1 (MQ=255)

                     gATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTggg                                                                    >  2:6537463/1‑93 (MQ=255)

                     gATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTggg                                                                    >  1:6140954/1‑93 (MQ=255)

                     gATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTggg                                                                    >  1:7628428/1‑93 (MQ=255)

                      aTACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGgc                                                                   <  2:421875/93‑1 (MQ=255)

                      aTACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGgc                                                                   <  1:2643401/93‑1 (MQ=255)

                       tACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGgcg                                                                  >  2:7202952/1‑93 (MQ=255)

                        acacCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGgcgc                                                                 >  1:2956415/1‑93 (MQ=255)

                          acCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTa                                                               >  2:2197876/1‑93 (MQ=255)

                          acCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTa                                                               <  2:7419610/93‑1 (MQ=255)

                            cATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTAtt                                                             >  2:6946858/1‑93 (MQ=255)

                            cATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTAtt                                                             >  2:3234559/1‑93 (MQ=255)

                            cATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGAGTTGGGGCATCCTCTTTGTCTGGGAGCTAtt                                                             >  1:7211682/1‑93 (MQ=255)

                             aTGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTAttt                                                            <  1:56016/93‑1 (MQ=255)

                             aTGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTAttt                                                            <  1:5465823/93‑1 (MQ=255)

                              tGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTg                                                           <  1:3112833/93‑1 (MQ=255)

                               gTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTgg                                                          <  2:3211526/93‑1 (MQ=255)

                               gTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTgg                                                          >  1:7545455/1‑93 (MQ=255)

                               gTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTgg                                                          >  1:3935979/1‑93 (MQ=255)

                                tCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGc                                                         <  2:2765988/93‑1 (MQ=255)

                                       cactcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACtt                                                  <  2:3981092/93‑1 (MQ=255)

                                       cactcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACtt                                                  <  2:5126272/93‑1 (MQ=255)

                                        actcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTg                                                 >  1:4554183/1‑93 (MQ=255)

                                        actcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTg                                                 >  1:4928702/1‑93 (MQ=255)

                                         ctcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGc                                                <  1:3867471/93‑1 (MQ=255)

                                         ctcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGc                                                >  1:38100/1‑93 (MQ=255)

                                         ctcaTTGCGACAGGATCACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGc                                                >  2:2916246/1‑93 (MQ=255)

                                          tcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCg                                               >  1:929566/1‑93 (MQ=255)

                                           caTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGa                                              <  2:1417078/93‑1 (MQ=255)

                                           caTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGa                                              >  1:5702066/1‑93 (MQ=255)

                                           caTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGa                                              >  1:2802063/1‑93 (MQ=255)

                                             ttGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGAct                                            >  1:6377644/1‑92 (MQ=255)

                                               gCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACatg                                          <  2:6431964/93‑1 (MQ=255)

                                               gCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACatg                                          >  1:1686547/1‑93 (MQ=255)

                                                cGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACatga                                         <  2:256848/93‑1 (MQ=255)

                                                 gACAGGATTACTGGGTGTTTATTTGACGACCATGCCGGGGAGTTGGGGCATCCTCTTTGTCTGGCCGCTATTTGGCGTTACTTGCGTCatgat                                        >  1:7779962/1‑93 (MQ=255)

                                                   cAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACAtgatga                                      <  2:4404734/93‑1 (MQ=255)

                                                   cAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACAtgatga                                      <  1:511552/93‑1 (MQ=255)

                                                    aGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGaa                                     <  1:1290836/93‑1 (MQ=255)

                                                    aGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGaa                                     <  2:2470165/93‑1 (MQ=255)

                                                      gATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACt                                   >  1:6325903/1‑93 (MQ=255)

                                                      gATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACt                                   <  2:5617244/93‑1 (MQ=255)

                                                       aTTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTg                                  <  2:1614759/93‑1 (MQ=255)

                                                       aTTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTg                                  <  2:7628370/93‑1 (MQ=255)

                                                         tACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGc                                <  2:2384048/93‑1 (MQ=255)

                                                          aCTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGcc                               >  1:5190154/1‑93 (MQ=255)

                                                           cTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCg                              <  2:84433/93‑1 (MQ=255)

                                                            tGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCgg                             >  1:7379054/1‑93 (MQ=255)

                                                             gggTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGt                            >  1:4448432/1‑93 (MQ=255)

                                                               gtgtTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCt                          <  2:1771154/93‑1 (MQ=255)

                                                                tgtTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCtt                         <  1:5910128/93‑1 (MQ=255)

                                                                 gtTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTg                        >  2:7768752/1‑93 (MQ=255)

                                                                  tttATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGc                       >  1:6543620/1‑93 (MQ=255)

                                                                   ttATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCt                      >  2:919406/1‑93 (MQ=255)

                                                                    tATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTc                     >  1:2289709/1‑93 (MQ=255)

                                                                    tATTTGACGAAAATACCGGGGTGTTGGGGCATACTCTTTGTCTGAGCGCTAATTGGCGTAACTTGCAAAATGATGAACTGGCCGGTCTTGCTc                     <  1:7029936/93‑1 (MQ=255)

                                                                      tttGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCaa                   <  1:7105753/93‑1 (MQ=255)

                                                                      tttGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCaa                   <  2:582903/93‑1 (MQ=255)

                                                                       ttGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAg                  <  1:2532931/93‑1 (MQ=255)

                                                                             acAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTa            >  2:2298448/1‑93 (MQ=255)

                                                                             acAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTa            >  1:3577220/1‑93 (MQ=255)

                                                                               aaTGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAg          >  1:991955/1‑93 (MQ=255)

                                                                                aTGCCAGGGTGTGTGGGCATCCTCTTTGTCTGGGCGCTATTTTGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGt         <  2:1081049/93‑1 (MQ=255)

                                                                                 tGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTc        <  2:3715664/93‑1 (MQ=255)

                                                                                 tGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTc        <  2:7756578/93‑1 (MQ=255)

                                                                                 tGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTc        <  2:4988638/93‑1 (MQ=255)

                                                                                   ccGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGa      <  1:348469/93‑1 (MQ=255)

                                                                                    cGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGAt     >  2:435260/1‑93 (MQ=255)

                                                                                     ggggTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGAtt    <  1:3412735/93‑1 (MQ=255)

                                                                                       ggTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTgg  >  1:5850504/1‑93 (MQ=255)

                                                                                       ggTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTgg  <  2:7302867/93‑1 (MQ=255)

TTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTATTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGG  >  NC_000913/4060022‑4060201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 209 total aligned reads displayed.

ATTTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTATTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGGGCAA  >  NC_000913/4060019‑4060205

ATTTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTG                                                                                               <  SRR4302543.3994644/94‑1 (MQ=60)

ATTTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTG                                                                                               >  SRR4302543.5331747/1‑94 (MQ=60)

ATTTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTG                                                                                               <  SRR4302543.7593280/94‑1 (MQ=60)

ATTTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTG                                                                                               <  SRR4302543.7386700/94‑1 (MQ=60)

 TTTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGT                                                                                              <  SRR4302543.3623198/94‑1 (MQ=60)

  TTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTT                                                                                             >  SRR4302543.948006/1‑94 (MQ=60)

  TTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTT                                                                                             >  SRR4302543.3281787/1‑94 (MQ=60)

  TTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTT                                                                                             <  SRR4302543.19782/94‑1 (MQ=60)

    TGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGG                                                                                           <  SRR4302543.2825230/94‑1 (MQ=60)

    TGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCAACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGG                                                                                           <  SRR4302543.3350874/94‑1 (MQ=60)

     GCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGG                                                                                          <  SRR4302543.1986548/94‑1 (MQ=60)

     GCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGG                                                                                          <  SRR4302543.3527179/94‑1 (MQ=60)

     GCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGG                                                                                          <  SRR4302543.6696991/94‑1 (MQ=60)

      CCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGG                                                                                         <  SRR4302543.1259115/94‑1 (MQ=60)

      CCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGG                                                                                         >  SRR4302543.3503607/1‑94 (MQ=60)

       CGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGC                                                                                        >  SRR4302543.1455022/1‑94 (MQ=60)

        GATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCA                                                                                       >  SRR4302543.4318966/1‑94 (MQ=60)

         ATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCAT                                                                                      >  SRR4302543.6941/1‑94 (MQ=60)

         ATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCAT                                                                                      <  SRR4302543.4600457/94‑1 (MQ=60)

         ATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCAT                                                                                      >  SRR4302543.5009596/1‑94 (MQ=60)

         ATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCAT                                                                                      <  SRR4302543.223435/94‑1 (MQ=60)

         ATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCAT                                                                                      >  SRR4302543.5063007/1‑94 (MQ=60)

         ATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCAT                                                                                      >  SRR4302543.1085958/1‑94 (MQ=60)

         ATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCAT                                                                                      >  SRR4302543.3243495/1‑94 (MQ=60)

         ATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGGTTATTTGACGACAATGCCGGGGTGTTGGGGCAT                                                                                      >  SRR4302543.3008952/1‑94 (MQ=60)

          TAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATC                                                                                     <  SRR4302543.5306340/94‑1 (MQ=60)

          TAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATC                                                                                     >  SRR4302543.7790279/1‑94 (MQ=60)

          TAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATC                                                                                     >  SRR4302543.1131918/1‑94 (MQ=60)

           AAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCC                                                                                    <  SRR4302543.2762020/94‑1 (MQ=60)

           AAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCC                                                                                    >  SRR4302543.4837133/1‑94 (MQ=60)

           AAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCC                                                                                    >  SRR4302543.1443492/1‑94 (MQ=60)

           AAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCC                                                                                    <  SRR4302543.7229466/94‑1 (MQ=60)

            AACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCGT                                                                                   >  SRR4302543.2385788/1‑94 (MQ=60)

            AACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCT                                                                                   <  SRR4302543.3430171/94‑1 (MQ=60)

            AACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCT                                                                                   <  SRR4302543.5781067/94‑1 (MQ=60)

            AACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCT                                                                                   <  SRR4302543.5926318/94‑1 (MQ=60)

            AACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTCGGGGCATCCT                                                                                   >  SRR4302543.5054513/1‑94 (MQ=60)

            AACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCAGGGGCGTTGGGGCATCCT                                                                                   >  SRR4302543.5054514/1‑94 (MQ=60)

             ACTACCGCGTAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTC                                                                                  <  SRR4302543.851106/94‑1 (MQ=60)

             ACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTC                                                                                  <  SRR4302543.851105/94‑1 (MQ=60)

              CTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCT                                                                                 >  SRR4302543.4769668/1‑94 (MQ=60)

              CTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCT                                                                                 >  SRR4302543.4635637/1‑94 (MQ=60)

              CTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCT                                                                                 <  SRR4302543.4985526/94‑1 (MQ=60)

              CTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCT                                                                                 >  SRR4302543.100224/1‑94 (MQ=60)

              CTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCT                                                                                 >  SRR4302543.6373165/1‑94 (MQ=60)

                 CCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTG                                                                              >  SRR4302543.1732316/1‑94 (MQ=60)

                    CGCAGATACACCGTGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCT                                                                           >  SRR4302543.4618659/1‑94 (MQ=60)

                    CGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCT                                                                           <  SRR4302543.3027038/94‑1 (MQ=60)

                     GCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTG                                                                          <  SRR4302543.5659418/94‑1 (MQ=60)

                     GCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTG                                                                          <  SRR4302543.2478135/94‑1 (MQ=60)

                     GCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTG                                                                          >  SRR4302543.289451/1‑94 (MQ=60)

                     GCAGATACACCATGTCATTCTCACTCAATGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTG                                                                          <  SRR4302543.5659417/94‑1 (MQ=60)

                      CAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGG                                                                         >  SRR4302543.5617935/1‑94 (MQ=60)

                      CAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGG                                                                         <  SRR4302543.5388054/94‑1 (MQ=60)

                      CAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGG                                                                         <  SRR4302543.4829252/94‑1 (MQ=60)

                      CAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGG                                                                         >  SRR4302543.4454219/1‑94 (MQ=60)

                       AGATACTCCATGTCATTCTCCCTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGG                                                                        <  SRR4302543.5983759/94‑1 (MQ=60)

                       AGATACACCCTGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGG                                                                        <  SRR4302543.4263106/94‑1 (MQ=60)

                       AGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGG                                                                        >  SRR4302543.6199115/1‑94 (MQ=60)

                       AGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGG                                                                        >  SRR4302543.7700821/1‑94 (MQ=60)

                       AGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGG                                                                        >  SRR4302543.7700822/1‑94 (MQ=60)

                       AGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGG                                                                        <  SRR4302543.782970/94‑1 (MQ=60)

                         ATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCG                                                                      <  SRR4302543.2667343/94‑1 (MQ=60)

                         ATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCG                                                                      >  SRR4302543.4538550/1‑94 (MQ=60)

                           ACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCT                                                                    >  SRR4302543.2688315/1‑94 (MQ=60)

                             ACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTAT                                                                  >  SRR4302543.7384595/1‑94 (MQ=60)

                             ACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTAT                                                                  >  SRR4302543.47588/1‑94 (MQ=60)

                             ACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTAT                                                                  >  SRR4302543.4549823/1‑94 (MQ=60)

                             ACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTAT                                                                  <  SRR4302543.6422422/94‑1 (MQ=60)

                              CCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATT                                                                 >  SRR4302543.289786/1‑94 (MQ=60)

                              CCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATT                                                                 >  SRR4302543.2638872/1‑94 (MQ=60)

                              CCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATT                                                                 <  SRR4302543.3473924/94‑1 (MQ=60)

                              CCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGAGTTGGGGCATCCTCTTTGTCTGGGAGCTATT                                                                 >  SRR4302543.7281589/1‑94 (MQ=60)

                               CATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTT                                                                <  SRR4302543.7220649/94‑1 (MQ=60)

                               CATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTT                                                                >  SRR4302543.2642483/1‑94 (MQ=60)

                               CATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTT                                                                >  SRR4302543.3352966/1‑94 (MQ=60)

                               CATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTT                                                                <  SRR4302543.3537451/94‑1 (MQ=60)

                                ATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTG                                                               <  SRR4302543.5515351/94‑1 (MQ=60)

                                ATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTG                                                               <  SRR4302543.56508/94‑1 (MQ=60)

                                 TGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGG                                                              >  SRR4302543.3970758/1‑94 (MQ=60)

                                 TGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGG                                                              >  SRR4302543.7617343/1‑94 (MQ=60)

                                 TGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGG                                                              >  SRR4302543.1955825/1‑94 (MQ=60)

                                 TGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGG                                                              <  SRR4302543.3140835/94‑1 (MQ=60)

                                 TGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGG                                                              <  SRR4302543.5577171/94‑1 (MQ=60)

                                    CATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGT                                                           >  SRR4302543.4748178/1‑94 (MQ=60)

                                     ATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTT                                                          <  SRR4302543.4323088/94‑1 (MQ=60)

                                     ATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTT                                                          <  SRR4302543.6550210/94‑1 (MQ=60)

                                     ATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTT                                                          >  SRR4302543.3407328/1‑94 (MQ=60)

                                     ATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTATTTGTCTGGGCGCTATTTGGCGTT                                                          >  SRR4302543.7857811/1‑94 (MQ=60)

                                      TTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTA                                                         >  SRR4302543.6958980/1‑94 (MQ=60)

                                         TCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTT                                                      <  SRR4302543.1775992/94‑1 (MQ=60)

                                          CACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTG                                                     <  SRR4302543.5076382/94‑1 (MQ=60)

                                          CACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTG                                                     >  SRR4302543.1563015/1‑94 (MQ=60)

                                          CACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTG                                                     >  SRR4302543.4973599/1‑94 (MQ=60)

                                          CACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTG                                                     <  SRR4302543.7514168/94‑1 (MQ=60)

                                          CACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTG                                                     <  SRR4302543.3743630/94‑1 (MQ=60)

                                          CACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTG                                                     >  SRR4302543.4595652/1‑94 (MQ=60)

                                           ACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGC                                                    >  SRR4302543.38451/1‑94 (MQ=60)

                                           ACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGC                                                    >  SRR4302543.3892834/1‑94 (MQ=60)

                                            CTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCG                                                   >  SRR4302543.937689/1‑94 (MQ=60)

                                            CTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCG                                                   >  SRR4302543.3910170/1‑94 (MQ=60)

                                            CTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCG                                                   <  SRR4302543.3901630/94‑1 (MQ=60)

                                             TCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGA                                                  >  SRR4302543.5754075/1‑94 (MQ=60)

                                             TCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGA                                                  >  SRR4302543.2827687/1‑94 (MQ=60)

                                             TCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGA                                                  >  SRR4302543.7129772/1‑94 (MQ=60)

                                             TCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGAGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGA                                                  >  SRR4302543.7637404/1‑94 (MQ=60)

                                              CATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGAC                                                 >  SRR4302543.941779/1‑94 (MQ=60)

                                              CATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGAC                                                 >  SRR4302543.3845080/1‑94 (MQ=60)

                                               ATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACT                                                >  SRR4302543.6437647/1‑94 (MQ=60)

                                               ATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACA                                                >  SRR4302543.7037143/1‑94 (MQ=60)

                                               ATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACA                                                <  SRR4302543.2844565/94‑1 (MQ=60)

                                               ATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACA                                                >  SRR4302543.3890230/1‑94 (MQ=60)

                                               ATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGCCTGGGCGCTTTTTGGgtttcctgcgcaca                                                >  SRR4302543.6437646/1‑80 (MQ=60)

                                                TTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACAT                                               >  SRR4302543.3260721/1‑94 (MQ=60)

                                                 TGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGcaatg                                              >  SRR4302543.7648805/1‑89 (MQ=60)

                                                 TGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATG                                              <  SRR4302543.167913/94‑1 (MQ=60)

                                                 TGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATG                                              >  SRR4302543.1701691/1‑94 (MQ=60)

                                                   CGACAGGATTACTGGGTGTTTATTTGACGACCATGCCGGGGAGTTGGGGCATCCTCTTTGTCTGGCCGCTATTTGGCGTTACTTGCGTCATGAT                                            >  SRR4302543.7853323/1‑94 (MQ=60)

                                                    GACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATG                                           >  SRR4302543.290647/1‑94 (MQ=60)

                                                    GACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATG                                           >  SRR4302543.181362/1‑94 (MQ=60)

                                                    GACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATG                                           >  SRR4302543.6671917/1‑94 (MQ=60)

                                                     ACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGA                                          <  SRR4302543.5291328/94‑1 (MQ=60)

                                                      CAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAA                                         <  SRR4302543.516307/94‑1 (MQ=60)

                                                       AGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAAC                                        <  SRR4302543.6355232/94‑1 (MQ=60)

                                                       AGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAAC                                        <  SRR4302543.1302328/94‑1 (MQ=60)

                                                       AGGATTACTGGGGGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGCAC                                        >  SRR4302543.2164005/1‑94 (MQ=60)

                                                        GGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACT                                       >  SRR4302543.6385398/1‑94 (MQ=60)

                                                         GATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTG                                      <  SRR4302543.6722692/94‑1 (MQ=60)

                                                         GATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTG                                      <  SRR4302543.5216500/94‑1 (MQ=60)

                                                         GATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTG                                      <  SRR4302543.5216499/94‑1 (MQ=60)

                                                          ATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGG                                     >  SRR4302543.397622/1‑94 (MQ=60)

                                                          ATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGG                                     <  SRR4302543.1371052/94‑1 (MQ=60)

                                                           TTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGC                                    <  SRR4302543.7609735/94‑1 (MQ=60)

                                                            TACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCC                                   <  SRR4302543.6671579/94‑1 (MQ=60)

                                                            TACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCC                                   >  SRR4302543.5236961/1‑94 (MQ=60)

                                                            TACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCC                                   >  SRR4302543.7450136/1‑94 (MQ=60)

                                                              CTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGG                                 <  SRR4302543.6811764/94‑1 (MQ=60)

                                                              CTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGG                                 >  SRR4302543.7449981/1‑94 (MQ=60)

                                                              CTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGG                                 <  SRR4302543.5652797/94‑1 (MQ=60)

                                                              CTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGG                                 <  SRR4302543.7832617/94‑1 (MQ=60)

                                                               TGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGT                                >  SRR4302543.4488727/1‑94 (MQ=60)

                                                               TGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGT                                >  SRR4302543.6424469/1‑94 (MQ=60)

                                                               TGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGT                                <  SRR4302543.3044215/94‑1 (MQ=60)

                                                                  GTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTT                             >  SRR4302543.4108954/1‑94 (MQ=60)

                                                                   TGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTG                            <  SRR4302543.5964092/94‑1 (MQ=60)

                                                                   TGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTG                            <  SRR4302543.5964091/94‑1 (MQ=60)

                                                                    GTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGC                           >  SRR4302543.3469331/1‑94 (MQ=60)

                                                                    GTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGC                           >  SRR4302543.6605207/1‑94 (MQ=60)

                                                                    GTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTAGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGC                           >  SRR4302543.7156782/1‑94 (MQ=60)

                                                                     TTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGCACTGGCCGGTCTTGCT                          <  SRR4302543.7779756/94‑1 (MQ=60)

                                                                      TTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTC                         >  SRR4302543.2310610/1‑94 (MQ=60)

                                                                      TTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTC                         >  SRR4302543.7640204/1‑94 (MQ=60)

                                                                       TATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCA                        >  SRR4302543.5590048/1‑94 (MQ=60)

                                                                       TATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCA                        >  SRR4302543.1465927/1‑94 (MQ=60)

                                                                       TATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGATCTTGCTCA                        >  SRR4302543.5337965/1‑94 (MQ=60)

                                                                       TATTTGACGAAAATACCGGGGTGTTGGGGCATACTCTTTGTCTGAGCGCTAATTGGCGTAACTTGCAAAATGATGAACTGGCCGGTCTTGCTCA                        <  SRR4302543.7097483/94‑1 (MQ=53)

                                                                        ATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAA                       >  SRR4302543.7766492/1‑94 (MQ=60)

                                                                         TTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAG                      >  SRR4302543.3626125/1‑94 (MQ=60)

                                                                         TTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAG                      <  SRR4302543.7174773/94‑1 (MQ=60)

                                                                         TTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTAGTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAG                      <  SRR4302543.7174774/94‑1 (MQ=60)

                                                                          TTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAGCTGGCCGGTCTTGCTCAAGT                     <  SRR4302543.2555996/94‑1 (MQ=60)

                                                                          TTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGT                     <  SRR4302543.2555995/94‑1 (MQ=60)

                                                                          TTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGC                     >  SRR4302543.6629499/1‑94 (MQ=60)

                                                                           TGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTATCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTC                    >  SRR4302543.7368374/1‑94 (MQ=60)

                                                                            GACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCG                   <  SRR4302543.5929399/94‑1 (MQ=60)

                                                                            GACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCG                   <  SRR4302543.4650130/94‑1 (MQ=60)

                                                                            GACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCG                   <  SRR4302543.1720312/94‑1 (MQ=60)

                                                                            GACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCG                   <  SRR4302543.1720311/94‑1 (MQ=60)

                                                                             ACGACAATGCGGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGG                  <  SRR4302543.5373117/94‑1 (MQ=60)

                                                                             ACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGG                  <  SRR4302543.4484066/94‑1 (MQ=60)

                                                                              CGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGT                 <  SRR4302543.7135025/94‑1 (MQ=60)

                                                                              CGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGA                 >  SRR4302543.6520484/1‑94 (MQ=60)

                                                                               GACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTA                <  SRR4302543.6479852/94‑1 (MQ=60)

                                                                               GACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTA                >  SRR4302543.3608828/1‑94 (MQ=60)

                                                                                ACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAA               >  SRR4302543.6111265/1‑94 (MQ=60)

                                                                                 CAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAG              >  SRR4302543.1000711/1‑94 (MQ=60)

                                                                                 CAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAG              <  SRR4302543.3519846/94‑1 (MQ=60)

                                                                                 CAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAG              >  SRR4302543.5770236/1‑94 (MQ=60)

                                                                                 CAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAG              <  SRR4302543.3919754/94‑1 (MQ=60)

                                                                                 CAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAG              <  SRR4302543.7420719/94‑1 (MQ=60)

                                                                                  AATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGT             >  SRR4302543.698636/1‑94 (MQ=60)

                                                                                  AATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGT             <  SRR4302543.1723488/94‑1 (MQ=60)

                                                                                  AATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGT             >  SRR4302543.4785394/1‑94 (MQ=60)

                                                                                  AATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAAATGGCCGGTCTTGCTCAAGTCGGTAAGG             >  SRR4302543.215259/1‑94 (MQ=60)

                                                                                   ATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTC            <  SRR4302543.6329525/94‑1 (MQ=60)

                                                                                   ATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTC            >  SRR4302543.7809288/1‑94 (MQ=60)

                                                                                    TGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCG           <  SRR4302543.4981860/94‑1 (MQ=60)

                                                                                    TGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCG           >  SRR4302543.5247912/1‑94 (MQ=60)

                                                                                     GCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGA          >  SRR4302543.2857176/1‑94 (MQ=60)

                                                                                      CCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGAT         >  SRR4302543.298181/1‑94 (MQ=60)

                                                                                      CCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGAT         <  SRR4302543.351691/94‑1 (MQ=60)

                                                                                        GGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTG       <  SRR4302543.3443291/94‑1 (MQ=60)

                                                                                        CGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTG       <  SRR4302543.2327875/94‑1 (MQ=60)

                                                                                         GGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGG      <  SRR4302543.1345798/94‑1 (MQ=60)

                                                                                         GGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGG      >  SRR4302543.5903741/1‑94 (MQ=60)

                                                                                         GGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGG      >  SRR4302543.5903742/1‑94 (MQ=60)

                                                                                           GTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGGGC    <  SRR4302543.5370633/94‑1 (MQ=60)

                                                                                            TGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGGGCA   >  SRR4302543.7363819/1‑94 (MQ=60)

                                                                                             GTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGGGCAA  >  SRR4302543.4718445/1‑94 (MQ=60)

                                                                                             GTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGGGCAA  >  SRR4302543.7912213/1‑94 (MQ=60)

ATTTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTATTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGGGCAA  >  NC_000913/4060019‑4060205

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`