Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,060,598 C→G A258G (GCT→GGT)  yihN → putative resistance protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,060,5980CG99.5% 1237.4 / ‑2.0 396coding (773/1266 nt)yihNputative resistance protein
Reads supporting (aligned to +/- strand):  ref base C (1/0);  major base G (209/184);  minor base . (1/1);  total (211/185)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.82e-02

Only 100 of 413 total aligned reads displayed.

TCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGCTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTA  >  NC_000913/4060508‑4060687
                                                                                          |                                                                                         
tcttctTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGtt                                                                                         >  1:5643951/1‑93 (MQ=255)
tcttctTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGtt                                                                                         >  2:617880/1‑93 (MQ=255)
tcttctTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGtt                                                                                         >  1:6625650/1‑93 (MQ=255)
 cttcttCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTa                                                                                        >  1:1686357/1‑93 (MQ=255)
      tcGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGca                                                                                   >  1:5829117/1‑93 (MQ=255)
        gTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGcatc                                                                                 <  1:4335567/93‑1 (MQ=255)
        gTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGcatc                                                                                 >  1:2076621/1‑93 (MQ=255)
         tttACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGcatca                                                                                >  2:6542535/1‑93 (MQ=255)
         tttACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGcatca                                                                                >  1:2188301/1‑93 (MQ=255)
         tttACGCGGTTTACTGTGGCCTGACATCCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGcatca                                                                                <  1:5564327/93‑1 (MQ=255)
              gcgGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAAc                                                                           <  1:4760764/93‑1 (MQ=255)
              gcgGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAAc                                                                           >  2:1786076/1‑93 (MQ=255)
                ggTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCa                                                                         <  1:1879495/93‑1 (MQ=255)
                 gTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCaa                                                                        <  1:2275947/93‑1 (MQ=255)
                 gTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCaa                                                                        >  2:1475940/1‑93 (MQ=255)
                 gTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCaa                                                                        <  1:4118913/93‑1 (MQ=255)
                  tttACTGTGGCCTGACATTCTTCATTCCCTTCCTGAAAAACATCTATCTATTGCCCGTTGCCGCGGCGAGGTGTTACGGCATCATGAACCAAt                                                                       >  1:5388534/1‑93 (MQ=255)
                  tttACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAAt                                                                       >  2:6847431/1‑93 (MQ=255)
                   ttACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATa                                                                      >  2:1209167/1‑93 (MQ=255)
                   ttACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATa                                                                      <  2:1818919/93‑1 (MQ=255)
                    tACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATAc                                                                     <  2:7198899/93‑1 (MQ=255)
                     tcTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACt                                                                    <  1:5867450/92‑1 (MQ=255)
                      cTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTg                                                                   >  2:3650801/1‑93 (MQ=255)
                      cTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTg                                                                   >  1:1468301/1‑93 (MQ=255)
                      cTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGAGTTACGGCATCATTAACCAATACTg                                                                   <  2:5729505/93‑1 (MQ=255)
                           gCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGa                                                              <  1:3016823/93‑1 (MQ=255)
                             cTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGaaa                                                            >  1:3349346/1‑93 (MQ=255)
                              tGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGaaaa                                                           <  2:5228006/93‑1 (MQ=255)
                              tGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGaaaa                                                           <  1:3200430/93‑1 (MQ=255)
                              tGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGaaaa                                                           <  2:3864828/93‑1 (MQ=255)
                              tGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGaaaa                                                           >  1:174954/1‑93 (MQ=255)
                                aCATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGTCATCATTAACCAATACTGTCTGAAAATg                                                         <  2:5501353/93‑1 (MQ=255)
                                aCATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATg                                                         <  2:1915304/93‑1 (MQ=255)
                                 cATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGACAATGa                                                        >  1:6318388/1‑93 (MQ=255)
                                  aTTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGAt                                                       <  1:5513481/93‑1 (MQ=255)
                                   ttcttcATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAATATGAtt                                                      >  2:7008071/1‑93 (MQ=255)
                                   ttcttcATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGAtt                                                      <  1:6939320/93‑1 (MQ=255)
                                   ttcttcATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGAtt                                                      >  2:1641506/1‑93 (MQ=255)
                                   ttcttcATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGAtt                                                      >  1:2729963/1‑93 (MQ=255)
                                   ttcttcATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGAtt                                                      >  1:4691798/1‑93 (MQ=255)
                                    tcttcATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGCTTACGGCATCATTAACCAATACTGTCTGAAAATGATtg                                                     >  2:7599831/1‑93 (MQ=255)
                                     cttcATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATtgg                                                    <  1:2424464/93‑1 (MQ=255)
                                       tcATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATtggtg                                                  <  1:4270237/93‑1 (MQ=255)
                                         attccattccTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGa                                                <  2:4925008/93‑1 (MQ=255)
                                          ttccattccTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGAc                                               >  2:4426304/1‑93 (MQ=255)
                                          ttccattccTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGAc                                               >  2:5126252/1‑93 (MQ=255)
                                           tccattccTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGAcc                                              >  2:6631607/1‑93 (MQ=255)
                                           tccattccTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGAcc                                              >  2:2539471/1‑93 (MQ=255)
                                              attccTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGAt                                           <  2:7494771/93‑1 (MQ=255)
                                              attccTGAAAAACATCTATCTATTGCCCGTTGCGCTGGGGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGAt                                           >  1:5323256/1‑93 (MQ=255)
                                               ttccTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGAtt                                          >  1:2311522/1‑93 (MQ=255)
                                               ttccTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGAtt                                          <  1:2945142/93‑1 (MQ=255)
                                                tccTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATtg                                         >  2:1068519/1‑93 (MQ=255)
                                                tccTGAAAAACATCTATCTATTGACCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATtg                                         <  2:4313046/93‑1 (MQ=255)
                                                 ccTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATtgg                                        >  2:4504061/1‑93 (MQ=255)
                                                 ccTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATtgg                                        <  1:945082/93‑1 (MQ=255)
                                                   tGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATtggtg                                      >  1:4938400/1‑93 (MQ=255)
                                                   tGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATtggtg                                      <  1:1330168/93‑1 (MQ=255)
                                                      aaaaCATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAACATGATTGGTGGACCGATTGGTGGCa                                   >  1:2651385/1‑93 (MQ=255)
                                                      aaaaCATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCa                                   >  2:6390224/1‑93 (MQ=255)
                                                      aaaaCATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCa                                   <  1:7773437/93‑1 (MQ=255)
                                                         aCATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGa                                >  1:3672759/1‑93 (MQ=255)
                                                           atctatctATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGAtt                              <  1:4024490/93‑1 (MQ=255)
                                                            tctatctaTTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGAttt                             >  1:7081183/1‑93 (MQ=255)
                                                            tctatctaTTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGAttt                             >  1:1261359/1‑93 (MQ=255)
                                                            tctatctaTTGCCCGTTGCGCTGGTGGGGGGGTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGAttt                             >  2:7904983/1‑93 (MQ=255)
                                                              tatctatTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCa                           >  1:6255734/1‑93 (MQ=255)
                                                              tatctatTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCa                           >  2:5419267/1‑93 (MQ=255)
                                                               atctatTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAg                          >  2:3293016/1‑93 (MQ=255)
                                                               atctatTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAg                          >  2:4761708/1‑93 (MQ=255)
                                                               atctatTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAg                          >  2:6096947/1‑93 (MQ=255)
                                                               atctatTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAg                          >  1:3818474/1‑93 (MQ=255)
                                                               atctatTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAg                          >  2:763270/1‑93 (MQ=255)
                                                                 ctatTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATCCTGTCTGAACACGATTGCTGTACCGATCGGTGGCCTGATTTCAGAt                        <  2:3516554/93‑1 (MQ=255)
                                                                 ctatTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGAt                        >  2:2003687/1‑93 (MQ=255)
                                                                    ttGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAg                     <  2:2415548/93‑1 (MQ=255)
                                                                     tGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGa                    <  2:7347213/93‑1 (MQ=255)
                                                                      gCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGAt                   >  2:5919063/1‑93 (MQ=255)
                                                                      gCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGAt                   <  1:7543890/93‑1 (MQ=255)
                                                                      gCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGAt                   <  1:6178805/93‑1 (MQ=255)
                                                                       cccGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATc                  >  2:378126/1‑93 (MQ=255)
                                                                       cccGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATc                  >  1:3459276/1‑93 (MQ=255)
                                                                        ccGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATcc                 >  1:3121303/1‑93 (MQ=255)
                                                                        ccGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATcc                 <  2:2201797/93‑1 (MQ=255)
                                                                         cGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCt                <  2:5355384/93‑1 (MQ=255)
                                                                          gTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTg               >  1:5035622/1‑93 (MQ=255)
                                                                           ttGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGa              >  1:2159157/1‑93 (MQ=255)
                                                                           ttGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGa              >  1:462045/1‑93 (MQ=255)
                                                                             gcgcTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGaaa            <  2:341465/93‑1 (MQ=255)
                                                                             gcgcTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGaaa            >  2:3160119/1‑93 (MQ=255)
                                                                              cgcTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAAt           >  1:6100720/1‑93 (MQ=255)
                                                                               gcTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATc          <  1:861508/93‑1 (MQ=255)
                                                                                cTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGGGGCATGATTTCAGATAAGATCCTGAAAtgg         >  1:1003053/1‑91 (MQ=255)
                                                                                 tggtggGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGc        <  2:6455583/93‑1 (MQ=255)
                                                                                  ggtggGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGcc       >  2:2719278/1‑93 (MQ=255)
                                                                                   gtggGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCa      <  2:4650681/93‑1 (MQ=255)
                                                                                    tggGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCaa     <  2:6776492/93‑1 (MQ=255)
                                                                                    tggGGGGTTACGGCATCATTAACCAATACTGCCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCaa     <  1:116895/93‑1 (MQ=255)
                                                                                     ggggggTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAg    <  1:7449958/93‑1 (MQ=255)
                                                                                       ggggTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTa  <  1:5196361/93‑1 (MQ=255)
                                                                                          |                                                                                         
TCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGCTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTA  >  NC_000913/4060508‑4060687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 228 total aligned reads displayed.
ACGTCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGCTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTAAAT  >  NC_000913/4060505‑4060690
                                                                                             |                                                                                            
ACGTCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGG                                                                                              <  SRR4302543.7496499/94‑1 (MQ=60)
 CGTCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGT                                                                                             >  SRR4302543.2388136/1‑94 (MQ=60)
 CGTCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGT                                                                                             >  SRR4302543.4746116/1‑94 (MQ=60)
  GTCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTT                                                                                            <  SRR4302543.2620885/94‑1 (MQ=60)
  GTCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTT                                                                                            >  SRR4302543.5111253/1‑94 (MQ=60)
  GTCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTT                                                                                            >  SRR4302543.5695399/1‑94 (MQ=60)
   TCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTA                                                                                           >  SRR4302543.1701501/1‑94 (MQ=60)
   TCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTA                                                                                           <  SRR4302543.2353458/94‑1 (MQ=60)
    CTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTAC                                                                                          <  SRR4302543.5559182/94‑1 (MQ=60)
      TCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCCATTGCCCGTTGCGCTGGTGGGGGGTTACGG                                                                                        <  SRR4302543.2127367/94‑1 (MQ=60)
       CTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGC                                                                                       >  SRR4302543.6315224/1‑94 (MQ=60)
       CTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGC                                                                                       >  SRR4302543.754408/1‑94 (MQ=60)
        TTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCA                                                                                      >  SRR4302543.1399633/1‑94 (MQ=60)
         TCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCAT                                                                                     >  SRR4302543.2945994/1‑94 (MQ=60)
          CGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATC                                                                                    >  SRR4302543.2095167/1‑94 (MQ=60)
           GTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCA                                                                                   <  SRR4302543.6624619/94‑1 (MQ=60)
           GTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCA                                                                                   >  SRR4302543.1285645/1‑94 (MQ=60)
           GTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCA                                                                                   <  SRR4302543.4374891/94‑1 (MQ=60)
           GTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCA                                                                                   >  SRR4302543.2207939/1‑94 (MQ=60)
           GTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCA                                                                                   >  SRR4302543.101842/1‑94 (MQ=60)
           GTTTACGCGGTTTACCGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCA                                                                                   <  SRR4302543.1977050/94‑1 (MQ=60)
            TTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCAT                                                                                  <  SRR4302543.3211163/94‑1 (MQ=60)
            TTTACGCGGTTTACTGTGGCCTGACATCCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCAT                                                                                  <  SRR4302543.5614938/94‑1 (MQ=60)
             TTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATT                                                                                 >  SRR4302543.2734145/1‑94 (MQ=60)
              TACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTA                                                                                <  SRR4302543.2004958/94‑1 (MQ=60)
              TACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTA                                                                                <  SRR4302543.5647688/94‑1 (MQ=60)
               ACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAA                                                                               <  SRR4302543.5967563/94‑1 (MQ=60)
                CGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAAC                                                                              <  SRR4302543.7260799/94‑1 (MQ=60)
                 GCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACC                                                                             <  SRR4302543.4804268/94‑1 (MQ=60)
                 GCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACC                                                                             <  SRR4302543.4804267/94‑1 (MQ=60)
                 GCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACC                                                                             <  SRR4302543.4681839/94‑1 (MQ=60)
                 GCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACC                                                                             <  SRR4302543.5816242/94‑1 (MQ=60)
                  CGGTTTACTGTGGTCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCA                                                                            >  SRR4302543.5873384/1‑94 (MQ=60)
                  CGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCA                                                                            <  SRR4302543.3333753/94‑1 (MQ=60)
                   GGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAA                                                                           <  SRR4302543.2759323/94‑1 (MQ=60)
                   GGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAA                                                                           <  SRR4302543.1896386/94‑1 (MQ=60)
                   GGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAA                                                                           >  SRR4302543.3016524/1‑94 (MQ=60)
                   GGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAA                                                                           >  SRR4302543.222011/1‑94 (MQ=60)
                   GGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAAACAA                                                                           >  SRR4302543.3512314/1‑94 (MQ=60)
                    GTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAAT                                                                          <  SRR4302543.735648/94‑1 (MQ=60)
                    GTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAAT                                                                          <  SRR4302543.2296765/94‑1 (MQ=60)
                    GTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAAT                                                                          <  SRR4302543.4156023/94‑1 (MQ=60)
                      TTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATAC                                                                        <  SRR4302543.1640723/94‑1 (MQ=60)
                      TTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGG‑TTACGGCATCATTAACCAATACT                                                                       <  SRR4302543.7985064/94‑1 (MQ=60)
                       TACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACT                                                                       <  SRR4302543.5867326/94‑1 (MQ=60)
                       TACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACT                                                                       <  SRR4302543.385632/94‑1 (MQ=60)
                        TCTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTG                                                                      <  SRR4302543.5920630/94‑1 (MQ=60)
                        TCTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTG                                                                      <  SRR4302543.5920868/94‑1 (MQ=60)
                        ATTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTG                                                                      <  SRR4302543.2389508/94‑1 (MQ=60)
                        ACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTT                                                                      >  SRR4302543.2187346/1‑94 (MQ=60)
                        ACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTG                                                                      <  SRR4302543.3450474/94‑1 (MQ=60)
                        ACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTG                                                                      <  SRR4302543.5802267/94‑1 (MQ=60)
                        ACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTG                                                                      <  SRR4302543.2896845/94‑1 (MQ=60)
                         CTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGT                                                                     >  SRR4302543.2120915/1‑94 (MQ=60)
                          TGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTC                                                                    <  SRR4302543.3554583/94‑1 (MQ=60)
                          TGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTC                                                                    >  SRR4302543.6321893/1‑94 (MQ=60)
                              GCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAA                                                                <  SRR4302543.3044110/94‑1 (MQ=60)
                              GCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAA                                                                <  SRR4302543.4371958/94‑1 (MQ=60)
                               CCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAA                                                               >  SRR4302543.3379505/1‑94 (MQ=60)
                                CTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAA                                                              >  SRR4302543.1797199/1‑94 (MQ=60)
                                CTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAA                                                              <  SRR4302543.350878/94‑1 (MQ=60)
                                CTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAA                                                              >  SRR4302543.2615142/1‑94 (MQ=60)
                                 TGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAAT                                                             <  SRR4302543.3229289/94‑1 (MQ=60)
                                 TGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAAT                                                             <  SRR4302543.5360409/94‑1 (MQ=60)
                                  GACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATG                                                            >  SRR4302543.1504092/1‑94 (MQ=60)
                                  GACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATG                                                            <  SRR4302543.1747279/94‑1 (MQ=60)
                                   ACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGACAATGA                                                           >  SRR4302543.6377809/1‑94 (MQ=60)
                                    CATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGAT                                                          <  SRR4302543.4664322/94‑1 (MQ=60)
                                    CATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGAT                                                          >  SRR4302543.7527090/1‑94 (MQ=60)
                                     ATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATT                                                         >  SRR4302543.4734634/1‑94 (MQ=60)
                                     ATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATT                                                         <  SRR4302543.6228731/94‑1 (MQ=60)
                                     ATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATT                                                         <  SRR4302543.5563549/94‑1 (MQ=60)
                                      TTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTG                                                        <  SRR4302543.3871545/94‑1 (MQ=60)
                                      TTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTG                                                        <  SRR4302543.7004591/94‑1 (MQ=60)
                                      TTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTG                                                        <  SRR4302543.4928657/94‑1 (MQ=60)
                                      TTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTG                                                        <  SRR4302543.1213287/94‑1 (MQ=60)
                                       TCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGG                                                       >  SRR4302543.1745881/1‑94 (MQ=60)
                                       TCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGG                                                       <  SRR4302543.1437684/94‑1 (MQ=60)
                                        CTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGT                                                      >  SRR4302543.7971634/1‑94 (MQ=60)
                                        CTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGT                                                      <  SRR4302543.2446351/94‑1 (MQ=60)
                                        CTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGT                                                      >  SRR4302543.3794473/1‑94 (MQ=60)
                                         TTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCCATACTGTCTGACAATGATTGGTG                                                     >  SRR4302543.5055007/1‑94 (MQ=60)
                                         TTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTG                                                     >  SRR4302543.5055008/1‑94 (MQ=60)
                                          TCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGG                                                    <  SRR4302543.6046879/94‑1 (MQ=60)
                                          TCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGG                                                    <  SRR4302543.4309042/94‑1 (MQ=60)
                                          TCATCCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCTTTTGTGGGGGGTTACGGCATCATAAACCAATGCTGTCTGAAAATGATTGGTGG                                                    <  SRR4302543.4309043/94‑1 (MQ=60)
                                           CATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGA                                                   >  SRR4302543.692270/1‑94 (MQ=60)
                                            ATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAATCAATACTGTCTGAAAATGATTGGTGGAC                                                  >  SRR4302543.6956984/1‑94 (MQ=60)
                                             TTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACC                                                 <  SRR4302543.6039184/94‑1 (MQ=60)
                                             TTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACC                                                 >  SRR4302543.7299911/1‑94 (MQ=60)
                                             TTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACC                                                 <  SRR4302543.2216878/94‑1 (MQ=60)
                                              TCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCG                                                >  SRR4302543.7647589/1‑94 (MQ=60)
                                              TCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCG                                                >  SRR4302543.4124355/1‑94 (MQ=60)
                                                CATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGAT                                              >  SRR4302543.3191071/1‑94 (MQ=60)
                                                CATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGAT                                              <  SRR4302543.7628378/94‑1 (MQ=60)
                                                CATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGAT                                              >  SRR4302543.5595670/1‑94 (MQ=60)
                                                CATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGAT                                              >  SRR4302543.5404887/1‑94 (MQ=60)
                                                CATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGGGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGAT                                              >  SRR4302543.5371382/1‑94 (MQ=60)
                                                 ATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATT                                             >  SRR4302543.2332556/1‑94 (MQ=60)
                                                 ATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATT                                             <  SRR4302543.7149647/94‑1 (MQ=60)
                                                  TTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTG                                            <  SRR4302543.621719/94‑1 (MQ=60)
                                                  TTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTG                                            <  SRR4302543.4449110/94‑1 (MQ=60)
                                                  TTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTG                                            <  SRR4302543.2971882/94‑1 (MQ=60)
                                                  TTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTG                                            >  SRR4302543.5491729/1‑94 (MQ=60)
                                                  TTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTG                                            <  SRR4302543.3944826/94‑1 (MQ=60)
                                                  TTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTG                                            <  SRR4302543.538664/94‑1 (MQ=60)
                                                   TCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGG                                           >  SRR4302543.5919393/1‑94 (MQ=60)
                                                   TCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGG                                           <  SRR4302543.1182838/94‑1 (MQ=60)
                                                   TCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGG                                           >  SRR4302543.3315435/1‑94 (MQ=60)
                                                    CCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGT                                          <  SRR4302543.2676818/94‑1 (MQ=60)
                                                    CCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGT                                          <  SRR4302543.1729977/94‑1 (MQ=60)
                                                    CCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGT                                          >  SRR4302543.2942879/1‑94 (MQ=60)
                                                    CCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGT                                          <  SRR4302543.953345/94‑1 (MQ=60)
                                                    CCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGT                                          >  SRR4302543.1246208/1‑94 (MQ=60)
                                                     CTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTG                                         <  SRR4302543.3471731/94‑1 (MQ=60)
                                                     CTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTG                                         <  SRR4302543.5591894/94‑1 (MQ=60)
                                                     CTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTG                                         >  SRR4302543.1173322/1‑94 (MQ=60)
                                                     CTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTG                                         >  SRR4302543.4983372/1‑94 (MQ=60)
                                                     CTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTG                                         >  SRR4302543.6259419/1‑94 (MQ=60)
                                                      TGAAAAACATCTATGTATTGCCCGTTGCGCTTGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGG                                        <  SRR4302543.1342026/94‑1 (MQ=60)
                                                      TGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGG                                        >  SRR4302543.6478301/1‑94 (MQ=60)
                                                      TGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGG                                        <  SRR4302543.1342028/94‑1 (MQ=60)
                                                      TGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGG                                        >  SRR4302543.4970907/1‑94 (MQ=60)
                                                        AAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAACATGATTGGTGGACCGATTGGTGGCA                                      >  SRR4302543.2675424/1‑94 (MQ=60)
                                                         AAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCAT                                     <  SRR4302543.7846755/94‑1 (MQ=60)
                                                          AAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATG                                    >  SRR4302543.2567351/1‑94 (MQ=60)
                                                          AAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATG                                    >  SRR4302543.934297/1‑94 (MQ=60)
                                                           TACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGA                                   >  SRR4302543.4758999/1‑94 (MQ=60)
                                                           AACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGA                                   <  SRR4302543.1443793/94‑1 (MQ=60)
                                                            ACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGAT                                  <  SRR4302543.7116743/94‑1 (MQ=60)
                                                            ACATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGAT                                  >  SRR4302543.924714/1‑94 (MQ=60)
                                                             CATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGTACCGATTGGTGGCATGATT                                 >  SRR4302543.7098678/1‑94 (MQ=60)
                                                              ATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTT                                >  SRR4302543.7149950/1‑94 (MQ=60)
                                                              ATCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTT                                <  SRR4302543.4060451/94‑1 (MQ=60)
                                                               TCTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTC                               <  SRR4302543.518098/94‑1 (MQ=60)
                                                                CTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCA                              >  SRR4302543.6266228/1‑94 (MQ=60)
                                                                CTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCA                              >  SRR4302543.6285131/1‑94 (MQ=60)
                                                                CTATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCA                              >  SRR4302543.2334336/1‑94 (MQ=60)
                                                                 TATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAG                             >  SRR4302543.949947/1‑94 (MQ=60)
                                                                 TATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAG                             <  SRR4302543.4177062/94‑1 (MQ=60)
                                                                 TATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAG                             >  SRR4302543.5263611/1‑94 (MQ=60)
                                                                 TATCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAG                             >  SRR4302543.3852145/1‑94 (MQ=60)
                                                                  ATCTATTGCCCGTTGCGCTGGTGGAGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGA                            <  SRR4302543.4088376/94‑1 (MQ=60)
                                                                   TCTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGAA                           >  SRR4302543.1831515/1‑94 (MQ=60)
                                                                    CTATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATA                          >  SRR4302543.4187293/1‑94 (MQ=60)
                                                                     TATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTACCCAATACTGTGTGAAAATGATTGGTGGACCGCGTGGTGGCATGATTTCCGATAA                         >  SRR4302543.3723770/1‑94 (MQ=60)
                                                                     TATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGCTTGGTGGACCGATTGGTGGCATGATTTCAGATAA                         >  SRR4302543.4879978/1‑94 (MQ=60)
                                                                     TATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAA                         >  SRR4302543.3723771/1‑94 (MQ=60)
                                                                      ATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAG                        >  SRR4302543.3281668/1‑94 (MQ=60)
                                                                      ATTGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAG                        <  SRR4302543.3131489/94‑1 (MQ=60)
                                                                        TGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGAT                      >  SRR4302543.2250891/1‑94 (MQ=60)
                                                                        TGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGAT                      >  SRR4302543.2304858/1‑94 (MQ=60)
                                                                        TGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGAT                      <  SRR4302543.2164589/94‑1 (MQ=60)
                                                                        TGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGAT                      >  SRR4302543.482920/1‑94 (MQ=60)
                                                                        TGCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGAT                      <  SRR4302543.5595291/94‑1 (MQ=60)
                                                                         GCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATC                     >  SRR4302543.4150338/1‑94 (MQ=60)
                                                                         GCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATC                     <  SRR4302543.7615773/94‑1 (MQ=60)
                                                                         GCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATC                     >  SRR4302543.3490268/1‑94 (MQ=60)
                                                                         GCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATC                     <  SRR4302543.1286100/94‑1 (MQ=60)
                                                                         GCCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATC                     <  SRR4302543.6237216/94‑1 (MQ=60)
                                                                          CCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCC                    >  SRR4302543.590722/1‑94 (MQ=60)
                                                                          CCCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCC                    >  SRR4302543.3149375/1‑94 (MQ=60)
                                                                           CCGTTGCGCTGGTGGGGGGTTACGGCTTCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCT                   <  SRR4302543.5385912/94‑1 (MQ=60)
                                                                           CCGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCT                   <  SRR4302543.5634718/94‑1 (MQ=60)
                                                                            CGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTG                  <  SRR4302543.7813004/94‑1 (MQ=60)
                                                                            CGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTG                  >  SRR4302543.1892982/1‑94 (MQ=60)
                                                                            CGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTG                  >  SRR4302543.6642971/1‑94 (MQ=60)
                                                                            CGTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTG                  >  SRR4302543.5081429/1‑94 (MQ=60)
                                                                             GTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGA                 >  SRR4302543.2723631/1‑94 (MQ=60)
                                                                             GTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGA                 >  SRR4302543.2178496/1‑94 (MQ=60)
                                                                             GTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGA                 >  SRR4302543.4487709/1‑94 (MQ=60)
                                                                             GTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGA                 >  SRR4302543.466344/1‑94 (MQ=60)
                                                                             GTTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGA                 >  SRR4302543.466345/1‑94 (MQ=60)
                                                                              TTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAA                <  SRR4302543.434753/94‑1 (MQ=60)
                                                                              TTGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAA                <  SRR4302543.3052180/94‑1 (MQ=60)
                                                                               TGCGCTTGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAA               <  SRR4302543.6807060/94‑1 (MQ=60)
                                                                               TGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAA               <  SRR4302543.3075607/94‑1 (MQ=60)
                                                                               TGCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAA               >  SRR4302543.2320837/1‑94 (MQ=60)
                                                                                GCGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGCTTTCAGATAAGATCCTTAAAT              >  SRR4302543.6158522/1‑94 (MQ=60)
                                                                                 CGCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATC             <  SRR4302543.1925943/94‑1 (MQ=60)
                                                                                  GCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCG            >  SRR4302543.5180680/1‑94 (MQ=60)
                                                                                  GCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCG            <  SRR4302543.869186/94‑1 (MQ=60)
                                                                                  GCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCG            <  SRR4302543.6348993/94‑1 (MQ=60)
                                                                                  GCTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGGGGCATGATTTCAGATAAGATCCTGAAATGG            >  SRR4302543.1011919/1‑94 (MQ=60)
                                                                                   CTGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGC           >  SRR4302543.116305/1‑94 (MQ=60)
                                                                                    TGGTGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCC          <  SRR4302543.2179035/94‑1 (MQ=60)
                                                                                       TGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAG       <  SRR4302543.3037337/94‑1 (MQ=60)
                                                                                       TGGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAG       <  SRR4302543.1537763/94‑1 (MQ=60)
                                                                                       TGGGGGGTTACGGCATCATTAACCAATACTGCCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAG       <  SRR4302543.117952/94‑1 (MQ=60)
                                                                                        GGGGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGT      <  SRR4302543.7521349/94‑1 (MQ=60)
                                                                                          GGGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTAA    <  SRR4302543.5243211/94‑1 (MQ=60)
                                                                                           GGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTAAA   <  SRR4302543.1853669/94‑1 (MQ=60)
                                                                                           GGGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTAAA   <  SRR4302543.3462286/94‑1 (MQ=60)
                                                                                            GGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTAACT  >  SRR4302543.2874443/1‑94 (MQ=60)
                                                                                            GGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTAAAT  <  SRR4302543.5384745/94‑1 (MQ=60)
                                                                                            GGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTAAAT  <  SRR4302543.2533831/94‑1 (MQ=60)
                                                                                            GGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTAAAT  <  SRR4302543.588590/94‑1 (MQ=60)
                                                                                            GGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTAAAT  >  SRR4302543.4401279/1‑94 (MQ=60)
                                                                                            GGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTAAAT  <  SRR4302543.6819081/94‑1 (MQ=60)
                                                                                            GGTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTAAAT  >  SRR4302543.2874442/1‑94 (MQ=60)
                                                                                             |                                                                                            
ACGTCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGCTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTAAAT  >  NC_000913/4060505‑4060690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑