Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,080,195	A→G	C49R (TGT→CGT)	fdoH ←	formate dehydrogenase‑O, iron‑sulfur subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,080,195	0	A	G	100.0%	1274.2 / NA	407	C49R (TGT→CGT)	fdoH	formate dehydrogenase‑O, iron‑sulfur subunit
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (227/180); total (227/180)

Only 100 of 426 total aligned reads displayed.

CCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGG  >  NC_000913/4080105‑4080284

 cGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACgcgc                                                                                        <  1:1185538/93‑1 (MQ=255)

    ccACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCAc                                                                                     <  1:1147960/93‑1 (MQ=255)

     cACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCAcc                                                                                    >  2:5314071/1‑93 (MQ=255)

     cACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCAcc                                                                                    >  2:6472366/1‑93 (MQ=255)

     cACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCAcc                                                                                    >  2:2133061/1‑93 (MQ=255)

        gATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGa                                                                                 >  1:4963594/1‑93 (MQ=255)

        gATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGa                                                                                 >  1:3523257/1‑93 (MQ=255)

         aTTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGAc                                                                                >  2:2761464/1‑93 (MQ=255)

         aTTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGAc                                                                                >  1:7374560/1‑93 (MQ=255)

         aTTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATCGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGAc                                                                                >  2:7039208/1‑93 (MQ=255)

          tttGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACa                                                                               >  1:6788782/1‑93 (MQ=255)

          tttGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACa                                                                               >  1:202270/1‑93 (MQ=255)

              gcgcTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCt                                                                           <  1:7067181/93‑1 (MQ=255)

              gcgcTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCt                                                                           <  1:6294946/93‑1 (MQ=255)

               cgcTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCtt                                                                          <  2:7268687/93‑1 (MQ=255)

                gcTTAAATCATTGGGGTTGTCGTCCACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCttt                                                                         <  2:5414687/93‑1 (MQ=255)

                 cTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTa                                                                        <  1:5987924/93‑1 (MQ=255)

                   tAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACa                                                                      >  1:6888923/1‑93 (MQ=255)

                   tAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACa                                                                      <  1:3094172/93‑1 (MQ=255)

                   tAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACa                                                                      >  2:1137912/1‑93 (MQ=255)

                    aaaTCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCCCTCTTAACGCGCCACCTGACAGGCTTTACAg                                                                     >  1:6090235/1‑93 (MQ=255)

                     aaTCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGc                                                                    <  2:6093769/93‑1 (MQ=255)

                      aTCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGcc                                                                   <  2:2544947/93‑1 (MQ=255)

                       tCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCg                                                                  >  2:4068657/1‑93 (MQ=255)

                        cATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGa                                                                 <  2:4574321/93‑1 (MQ=255)

                        cATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGa                                                                 <  2:7434505/93‑1 (MQ=255)

                        cATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGa                                                                 >  2:7302565/1‑93 (MQ=255)

                        cATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGa                                                                 <  1:532278/93‑1 (MQ=255)

                         aTTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGAt                                                                >  2:4743010/1‑93 (MQ=255)

                          ttGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATa                                                               <  2:5802356/93‑1 (MQ=255)

                          ttGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATa                                                               >  2:2864548/1‑93 (MQ=255)

                           tGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAACGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATAc                                                              >  1:2131924/1‑93 (MQ=255)

                            ggggTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACa                                                             <  2:5107969/93‑1 (MQ=255)

                            ggggTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACa                                                             <  1:6605689/93‑1 (MQ=255)

                             gggTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAg                                                            >  2:5957670/1‑93 (MQ=255)

                                ttGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAggtg                                                         >  1:7882848/1‑93 (MQ=255)

                                     gTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAAc                                                    >  2:3804364/1‑93 (MQ=255)

                                     gTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAAc                                                    >  1:283796/1‑93 (MQ=255)

                                     gTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAAc                                                    <  1:2643422/93‑1 (MQ=255)

                                     gTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAAc                                                    <  2:6636803/93‑1 (MQ=255)

                                       tctccccAATGTTATGGCCGACGGTAGCTCTAATGTCTTTCCACTCTGAACGCGCCACCTGACAGTCTTTACAGCCGATACAGGTGGTAACGt                                                  <  1:1063888/90‑1 (MQ=18)

                                          ccccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGa                                               <  2:2483528/93‑1 (MQ=255)

                                          ccccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGa                                               >  2:3974238/1‑93 (MQ=255)

                                           cccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAt                                              >  1:5661954/1‑93 (MQ=255)

                                           cccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAt                                              <  1:5484017/93‑1 (MQ=255)

                                            ccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATg                                             >  1:5694659/1‑93 (MQ=255)

                                            ccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATg                                             <  2:4927370/93‑1 (MQ=255)

                                            ccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATg                                             <  1:1289394/93‑1 (MQ=255)

                                            ccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATg                                             >  2:3339029/1‑93 (MQ=255)

                                            ccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGCAACGTCGATg                                             >  2:1712542/1‑93 (MQ=255)

                                             cAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGa                                            <  1:3860433/93‑1 (MQ=255)

                                               aTGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGt                                          >  1:3675846/1‑93 (MQ=255)

                                                 gTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGttt                                        >  1:636018/1‑93 (MQ=255)

                                                 gTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGttt                                        >  1:2404922/1‑93 (MQ=255)

                                                  ttATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTc                                       <  1:1005051/93‑1 (MQ=255)

                                                   tATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCg                                      >  1:6182808/1‑93 (MQ=255)

                                                    aTTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGc                                     >  1:376756/1‑93 (MQ=255)

                                                      tGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCa                                   <  2:6193469/93‑1 (MQ=255)

                                                      tGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCa                                   <  2:5553418/93‑1 (MQ=255)

                                                       gCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCAc                                  <  2:7735816/93‑1 (MQ=255)

                                                       gCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCAc                                  >  1:4212274/1‑93 (MQ=255)

                                                       gCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCAc                                  <  1:4623814/93‑1 (MQ=255)

                                                         cGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActt                                >  1:896861/1‑93 (MQ=255)

                                                          gACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActtc                               >  2:409870/1‑93 (MQ=255)

                                                          gACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACACGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActtc                               >  2:1016483/1‑93 (MQ=255)

                                                           aCGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActtct                              <  1:2515784/93‑1 (MQ=255)

                                                            cGGTATCGCGAATGTCGTTCCACTCTGAACGCGCAACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActtctt                             <  2:1830554/93‑1 (MQ=255)

                                                             ggTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACttcttc                            >  2:7793846/1‑93 (MQ=255)

                                                             ggTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACttcttc                            <  1:257888/93‑1 (MQ=255)

                                                              gTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTcc                           >  2:2996712/1‑93 (MQ=255)

                                                              gTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTcc                           >  2:3656868/1‑93 (MQ=255)

                                                              gTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTcc                           <  1:7311125/93‑1 (MQ=255)

                                                               tATCGCGAATGTCGTTCCCCTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCt                          <  1:2972111/93‑1 (MQ=255)

                                                                aTCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTg                         <  1:7768192/93‑1 (MQ=255)

                                                                aTCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTg                         <  1:1652247/93‑1 (MQ=255)

                                                                 tCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTgg                        <  1:1753824/93‑1 (MQ=255)

                                                                 tCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTgg                        >  2:2326239/1‑93 (MQ=255)

                                                                 tCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTgg                        >  1:1901945/1‑93 (MQ=255)

                                                                  cgcgAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGa                       <  2:118595/93‑1 (MQ=255)

                                                                    cgAATGTCGTTCCACTCTGAACGCTCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAg                     <  1:7669925/93‑1 (MQ=255)

                                                                     gAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGt                    >  2:4280601/1‑93 (MQ=255)

                                                                       aTGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTcc                  <  2:4830015/93‑1 (MQ=255)

                                                                       aTGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTcc                  >  2:5188508/1‑93 (MQ=255)

                                                                         ttCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCcg                <  1:5189873/92‑1 (MQ=255)

                                                                         gTCGTTCCCCTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCcg                <  2:1901491/93‑1 (MQ=255)

                                                                            gTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCgcgc             >  1:7007420/1‑93 (MQ=255)

                                                                             ttCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGcc            >  2:3608817/1‑93 (MQ=255)

                                                                             gtCCACTCTGAACGCGCCCCCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGcc            <  1:3229689/92‑1 (MQ=255)

                                                                              tCCACTCTGATCGCGCCACCTGACAGTCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCt           <  1:7185806/93‑1 (MQ=255)

                                                                               ccACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTg          >  2:151863/1‑93 (MQ=255)

                                                                                cACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGa         >  2:6343948/1‑93 (MQ=255)

                                                                                cACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGa         <  1:3174551/93‑1 (MQ=255)

                                                                                cACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGa         >  1:4699089/1‑93 (MQ=255)

                                                                                 aCTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAg        >  2:6777828/1‑93 (MQ=255)

                                                                                 aCTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAg        >  2:6865419/1‑93 (MQ=255)

                                                                                  ctctGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAgg       >  1:7542637/1‑93 (MQ=255)

                                                                                   tctGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGgc      >  2:3176255/1‑93 (MQ=255)

                                                                                    ctGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGgcg     >  2:7574135/1‑93 (MQ=255)

                                                                                     tGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGTCTGAGgcgc    >  2:7920879/1‑93 (MQ=255)

                                                                                     tGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGgcgc    >  1:1357472/1‑93 (MQ=255)

CCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGG  >  NC_000913/4080105‑4080284

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 227 total aligned reads displayed.

TTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGT  >  NC_000913/4080102‑4080288

TTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACG                                                                                               <  SRR4302543.1795080/94‑1 (MQ=60)

 TACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGC                                                                                              >  SRR4302543.6960645/1‑94 (MQ=60)

 TACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGC                                                                                              <  SRR4302543.5254650/94‑1 (MQ=60)

  ACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCG                                                                                             <  SRR4302543.7999876/94‑1 (MQ=60)

  ACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCG                                                                                             >  SRR4302543.1954170/1‑94 (MQ=60)

   CCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGC                                                                                            >  SRR4302543.6800236/1‑94 (MQ=60)

   CCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGC                                                                                            >  SRR4302543.2209839/1‑94 (MQ=60)

    CGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCC                                                                                           >  SRR4302543.7172453/1‑94 (MQ=60)

    CGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCC                                                                                           >  SRR4302543.6281450/1‑94 (MQ=60)

    CGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCC                                                                                           <  SRR4302543.1196237/94‑1 (MQ=60)

     GTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCA                                                                                          >  SRR4302543.7681048/1‑94 (MQ=60)

     GTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCA                                                                                          >  SRR4302543.3188757/1‑94 (MQ=60)

     GTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCA                                                                                          >  SRR4302543.7150693/1‑94 (MQ=60)

     GTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCA                                                                                          >  SRR4302543.376388/1‑94 (MQ=60)

     GTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCA                                                                                          >  SRR4302543.3188758/1‑94 (MQ=60)

     GTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCA                                                                                          <  SRR4302543.7470671/94‑1 (MQ=60)

     GTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCA                                                                                          >  SRR4302543.1223470/1‑94 (MQ=60)

      TCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTTCCGACGGTATCGCGAATGTCATTCCACTCTGAACGCGCCAC                                                                                         <  SRR4302543.1346822/94‑1 (MQ=60)

      TCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCAC                                                                                         >  SRR4302543.1002419/1‑94 (MQ=60)

      TCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCAC                                                                                         >  SRR4302543.1872283/1‑94 (MQ=60)

      TCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCATTCCACTCTGAACGCGCCAC                                                                                         <  SRR4302543.1346823/94‑1 (MQ=60)

      TCCACGATTTGGCGCTTAAATCATTGGGGGTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCAC                                                                                         >  SRR4302543.7275754/1‑94 (MQ=60)

       CCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACC                                                                                        <  SRR4302543.6189856/94‑1 (MQ=60)

       CCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACC                                                                                        <  SRR4302543.1158418/94‑1 (MQ=60)

         ACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGACTGTCGTTCCACTCTGAACGCGCCACCTG                                                                                      >  SRR4302543.2529970/1‑94 (MQ=60)

         ACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTG                                                                                      <  SRR4302543.1947693/94‑1 (MQ=60)

         ACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTG                                                                                      >  SRR4302543.2529971/1‑94 (MQ=60)

          CGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGA                                                                                     >  SRR4302543.5008777/1‑94 (MQ=60)

          CGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGA                                                                                     >  SRR4302543.3554682/1‑94 (MQ=60)

           GATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGAC                                                                                    >  SRR4302543.7973925/1‑94 (MQ=60)

            ATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACA                                                                                   >  SRR4302543.2604114/1‑94 (MQ=60)

            ATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACA                                                                                   <  SRR4302543.5303755/94‑1 (MQ=60)

            ATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACA                                                                                   >  SRR4302543.203974/1‑94 (MQ=60)

              TTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGG                                                                                 <  SRR4302543.6172139/94‑1 (MQ=60)

                 GCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTT                                                                              <  SRR4302543.6354200/94‑1 (MQ=60)

                 GCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTT                                                                              <  SRR4302543.7135798/94‑1 (MQ=60)

                  GGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTT                                                                             <  SRR4302543.6701317/94‑1 (MQ=60)

                  CGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTT                                                                             >  SRR4302543.3657197/1‑94 (MQ=60)

                   GCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTA                                                                            >  SRR4302543.6034793/1‑94 (MQ=60)

                   GCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTA                                                                            >  SRR4302543.1324274/1‑94 (MQ=60)

                    CTTAAATCATTGGGGTTGTCGTACCCCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTAC                                                                           <  SRR4302543.6042798/94‑1 (MQ=60)

                    CTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTAC                                                                           <  SRR4302543.6042797/94‑1 (MQ=60)

                     TTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACA                                                                          >  SRR4302543.6953708/1‑94 (MQ=60)

                     TTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACA                                                                          >  SRR4302543.7841266/1‑94 (MQ=60)

                     TTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACA                                                                          <  SRR4302543.95000/94‑1 (MQ=60)

                      TAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCCCTCTTAACGCGCCACCTGACAGGCTTTACAG                                                                         >  SRR4302543.6147957/1‑94 (MQ=60)

                       AAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGCACGCGCCATCTGACAGGCTTTACAGC                                                                        >  SRR4302543.7091891/1‑94 (MQ=60)

                       AAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGC                                                                        >  SRR4302543.7091890/1‑94 (MQ=60)

                        AATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCC                                                                       >  SRR4302543.6971526/1‑94 (MQ=60)

                         ATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCG                                                                      <  SRR4302543.7405905/94‑1 (MQ=60)

                         ATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCG                                                                      >  SRR4302543.6215036/1‑94 (MQ=60)

                         ATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTCACAGCCG                                                                      >  SRR4302543.3718481/1‑94 (MQ=60)

                           CATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGAT                                                                    <  SRR4302543.537208/94‑1 (MQ=60)

                           CATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGAT                                                                    >  SRR4302543.7188528/1‑94 (MQ=60)

                           CATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGAT                                                                    >  SRR4302543.1296827/1‑94 (MQ=60)

                             TTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATAC                                                                  >  SRR4302543.4717299/1‑94 (MQ=60)

                             TTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAACGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATAC                                                                  >  SRR4302543.2151011/1‑94 (MQ=60)

                              TGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACA                                                                 <  SRR4302543.2374543/94‑1 (MQ=60)

                               GGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAG                                                                <  SRR4302543.5544269/94‑1 (MQ=60)

                               GGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAG                                                                <  SRR4302543.5350504/94‑1 (MQ=60)

                               GGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAG                                                                >  SRR4302543.3829918/1‑94 (MQ=60)

                               GGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAG                                                                <  SRR4302543.6667944/94‑1 (MQ=60)

                               GGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAG                                                                <  SRR4302543.1930424/94‑1 (MQ=60)

                                GGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGG                                                               >  SRR4302543.6416439/1‑94 (MQ=60)

                                 GGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGT                                                              <  SRR4302543.3901100/94‑1 (MQ=60)

                                  GTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTG                                                             <  SRR4302543.3239827/94‑1 (MQ=60)

                                  GTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTG                                                             >  SRR4302543.7680094/1‑94 (MQ=60)

                                  GTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTG                                                             <  SRR4302543.5837667/94‑1 (MQ=60)

                                   TTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGG                                                            <  SRR4302543.5106996/94‑1 (MQ=60)

                                   TTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGG                                                            <  SRR4302543.5417853/94‑1 (MQ=60)

                                   TTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGG                                                            <  SRR4302543.7302281/94‑1 (MQ=60)

                                    TGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCATTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGT                                                           >  SRR4302543.541697/1‑94 (MQ=60)

                                       CGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAAC                                                        >  SRR4302543.6286978/1‑94 (MQ=60)

                                       CGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAAC                                                        >  SRR4302543.286320/1‑94 (MQ=60)

                                        GTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACG                                                       <  SRR4302543.2667364/94‑1 (MQ=60)

                                        GTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACG                                                       >  SRR4302543.4102642/1‑94 (MQ=60)

                                        GTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACG                                                       >  SRR4302543.4203520/1‑94 (MQ=60)

                                        GTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACG                                                       <  SRR4302543.1894212/94‑1 (MQ=60)

                                        GTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACG                                                       >  SRR4302543.4385874/1‑94 (MQ=60)

                                        GTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACG                                                       >  SRR4302543.2118746/1‑94 (MQ=60)

                                        GTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACG                                                       >  SRR4302543.300656/1‑94 (MQ=60)

                                        GTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACG                                                       >  SRR4302543.6654029/1‑94 (MQ=60)

                                         TACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGT                                                      >  SRR4302543.7843566/1‑94 (MQ=60)

                                         TACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGT                                                      <  SRR4302543.6932519/94‑1 (MQ=60)

                                         TACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGT                                                      <  SRR4302543.6932517/94‑1 (MQ=60)

                                         TACACCCCAATGTTATTGACGACGGTACCGCGAATCTCGTTCCCCTCTGAACGCGCCACGTGACAGGCTTTACAGCCGATACAGGTGGTAACGT                                                      <  SRR4302543.3635444/94‑1 (MQ=60)

                                          tctCCCCAATGTTATGGCCGACGGTAGCTCTAATGTCTTTCCACTCTGAACGCGCCACCTGACAGTCTTTACAGCCGATACAGGTGGTAACGTC                                                     <  SRR4302543.1073446/91‑1 (MQ=37)

                                          ACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTC                                                     <  SRR4302543.1073444/94‑1 (MQ=60)

                                            ACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGA                                                   >  SRR4302543.572723/1‑94 (MQ=60)

                                            ACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGA                                                   >  SRR4302543.5849033/1‑94 (MQ=60)

                                             CCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAT                                                  <  SRR4302543.6990984/94‑1 (MQ=60)

                                             CCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAT                                                  >  SRR4302543.5713596/1‑94 (MQ=60)

                                             CCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAT                                                  >  SRR4302543.5713598/1‑94 (MQ=60)

                                             CCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAT                                                  >  SRR4302543.7854993/1‑94 (MQ=60)

                                              CCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATG                                                 <  SRR4302543.4685356/94‑1 (MQ=60)

                                              CCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATG                                                 <  SRR4302543.567584/94‑1 (MQ=60)

                                              CCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATG                                                 <  SRR4302543.5533728/94‑1 (MQ=60)

                                              CCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATG                                                 >  SRR4302543.5746618/1‑94 (MQ=60)

                                               CCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGA                                                <  SRR4302543.4343907/94‑1 (MQ=60)

                                               CCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGA                                                <  SRR4302543.1300876/94‑1 (MQ=60)

                                               CCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGA                                                >  SRR4302543.103691/1‑94 (MQ=60)

                                               CCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGA                                                >  SRR4302543.2557805/1‑94 (MQ=60)

                                                CAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAG                                               >  SRR4302543.7776720/1‑94 (MQ=60)

                                                CAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAG                                               >  SRR4302543.2547300/1‑94 (MQ=60)

                                                CAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAG                                               <  SRR4302543.3894533/94‑1 (MQ=60)

                                                CAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAG                                               >  SRR4302543.7776721/1‑94 (MQ=60)

                                                 AATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGT                                              >  SRR4302543.2119106/1‑94 (MQ=60)

                                                 AATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGT                                              >  SRR4302543.3205876/1‑94 (MQ=60)

                                                 AATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGT                                              >  SRR4302543.1313722/1‑94 (MQ=60)

                                                 AATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGT                                              >  SRR4302543.3708124/1‑94 (MQ=60)

                                                 AATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGT                                              >  SRR4302543.3708125/1‑94 (MQ=60)

                                                 AATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGT                                              >  SRR4302543.817797/1‑94 (MQ=60)

                                                 AATGTTATGGCCGACGGTATCGCGAATGTCGTTCCCCTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGT                                              <  SRR4302543.6706816/94‑1 (MQ=60)

                                                  ATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTT                                             >  SRR4302543.1017035/1‑94 (MQ=60)

                                                  ATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTT                                             <  SRR4302543.761411/94‑1 (MQ=60)

                                                  ATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGGT                                             >  SRR4302543.3776598/1‑94 (MQ=60)

                                                   TGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTT                                            >  SRR4302543.3045884/1‑94 (MQ=60)

                                                   TGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTT                                            >  SRR4302543.641833/1‑94 (MQ=60)

                                                   TGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTT                                            >  SRR4302543.2426672/1‑94 (MQ=60)

                                                   TGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTT                                            >  SRR4302543.1668796/1‑94 (MQ=60)

                                                    GTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTC                                           >  SRR4302543.7681124/1‑94 (MQ=60)

                                                    GTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTC                                           >  SRR4302543.2633537/1‑94 (MQ=60)

                                                    GTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTC                                           >  SRR4302543.1753720/1‑94 (MQ=60)

                                                     TTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCG                                          >  SRR4302543.6523741/1‑94 (MQ=60)

                                                     TTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCG                                          <  SRR4302543.6840627/94‑1 (MQ=60)

                                                     TTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCG                                          >  SRR4302543.6241239/1‑94 (MQ=60)

                                                     TTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCG                                          <  SRR4302543.1013941/94‑1 (MQ=60)

                                                     TTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCG                                          >  SRR4302543.1432581/1‑94 (MQ=60)

                                                     TTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCG                                          <  SRR4302543.535522/94‑1 (MQ=60)

                                                     TTAATGCCGGCGGTAGCGCGAATGTCGGTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCG                                          <  SRR4302543.2805392/94‑1 (MQ=51)

                                                      TATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGC                                         >  SRR4302543.380229/1‑94 (MQ=60)

                                                       ATTGCCGACGTTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCC                                        <  SRR4302543.4993054/94‑1 (MQ=60)

                                                       ATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACCGCCGATAAAGGTGGTAACGTCGATGAGTTTCGCC                                        >  SRR4302543.1084505/1‑94 (MQ=60)

                                                       ATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCC                                        <  SRR4302543.7369437/94‑1 (MQ=60)

                                                       ATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCC                                        >  SRR4302543.5120982/1‑94 (MQ=60)

                                                       ATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCC                                        >  SRR4302543.1084506/1‑94 (MQ=60)

                                                         TGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCAC                                      <  SRR4302543.4158763/94‑1 (MQ=60)

                                                         TGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCAC                                      >  SRR4302543.4250471/1‑94 (MQ=60)

                                                          GCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACT                                     <  SRR4302543.4665823/94‑1 (MQ=60)

                                                          GCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACT                                     >  SRR4302543.3408683/1‑94 (MQ=60)

                                                           CCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTT                                    <  SRR4302543.7240886/94‑1 (MQ=60)

                                                           CCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTT                                    >  SRR4302543.904778/1‑94 (MQ=60)

                                                           CCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTT                                    >  SRR4302543.3876886/1‑94 (MQ=60)

                                                            CGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTC                                   >  SRR4302543.2288028/1‑94 (MQ=60)

                                                            CGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTC                                   >  SRR4302543.7937065/1‑94 (MQ=60)

                                                             CACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCT                                  <  SRR4302543.2626672/94‑1 (MQ=60)

                                                              ACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTT                                 >  SRR4302543.2561908/1‑94 (MQ=60)

                                                              ACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTT                                 <  SRR4302543.2538633/94‑1 (MQ=60)

                                                                GGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCC                               >  SRR4302543.2912980/1‑94 (MQ=60)

                                                                GGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCC                               >  SRR4302543.1183004/1‑94 (MQ=60)

                                                                 GTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCT                              <  SRR4302543.7381599/94‑1 (MQ=60)

                                                                 GTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCT                              <  SRR4302543.2756757/94‑1 (MQ=60)

                                                                 GTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCT                              <  SRR4302543.862221/94‑1 (MQ=60)

                                                                  TATCGCGAATGTCGTTCCCCTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTG                             <  SRR4302543.2999098/94‑1 (MQ=60)

                                                                   ATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGG                            <  SRR4302543.1667028/94‑1 (MQ=60)

                                                                   ATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGG                            >  SRR4302543.7471924/1‑94 (MQ=60)

                                                                   ATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGG                            >  SRR4302543.1919057/1‑94 (MQ=60)

                                                                   ATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGG                            <  SRR4302543.7841481/94‑1 (MQ=60)

                                                                   ATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGG                            >  SRR4302543.4940915/1‑94 (MQ=60)

                                                                   ATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGG                            <  SRR4302543.7964913/94‑1 (MQ=60)

                                                                   ATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGG                            <  SRR4302543.6181654/94‑1 (MQ=60)

                                                                    TCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGA                           <  SRR4302543.1769489/94‑1 (MQ=60)

                                                                    TCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGA                           <  SRR4302543.2482128/94‑1 (MQ=60)

                                                                      GCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAG                         <  SRR4302543.1162788/94‑1 (MQ=60)

                                                                      GCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAG                         <  SRR4302543.6411588/94‑1 (MQ=60)

                                                                       CGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGT                        <  SRR4302543.6939710/94‑1 (MQ=60)

                                                                       CGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGT                        <  SRR4302543.4873217/94‑1 (MQ=60)

                                                                        GAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTC                       >  SRR4302543.1880813/1‑94 (MQ=60)

                                                                        GAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTC                       >  SRR4302543.7538104/1‑94 (MQ=60)

                                                                        GAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTC                       <  SRR4302543.6387396/94‑1 (MQ=60)

                                                                         ACTGTCGTTCCACTCTGAACGCGCCACCTGACCGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCC                      <  SRR4302543.338753/94‑1 (MQ=60)

                                                                          ATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCC                     >  SRR4302543.3037800/1‑94 (MQ=60)

                                                                           TGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCG                    <  SRR4302543.5102149/94‑1 (MQ=60)

                                                                           TGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCG                    <  SRR4302543.471325/94‑1 (MQ=60)

                                                                           TGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCC                    >  SRR4302543.5642985/1‑94 (MQ=60)

                                                                             TCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCG                  >  SRR4302543.2906258/1‑94 (MQ=60)

                                                                              CGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGC                 >  SRR4302543.2710404/1‑94 (MQ=60)

                                                                              CGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGC                 >  SRR4302543.7074108/1‑94 (MQ=60)

                                                                              CGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGC                 >  SRR4302543.1662255/1‑94 (MQ=60)

                                                                               GTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCC                >  SRR4302543.5576199/1‑94 (MQ=60)

                                                                                TTCCCCTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCT               <  SRR4302543.7430860/94‑1 (MQ=60)

                                                                                TTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCT               <  SRR4302543.321764/94‑1 (MQ=60)

                                                                                TTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCT               >  SRR4302543.3189449/1‑94 (MQ=60)

                                                                                GTCCACTCTGAACGCGCCCCCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCT               <  SRR4302543.3258891/94‑1 (MQ=60)

                                                                                  CCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGA             >  SRR4302543.4742003/1‑94 (MQ=60)

                                                                                   CACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAG            <  SRR4302543.7445076/94‑1 (MQ=60)

                                                                                   CACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAG            >  SRR4302543.1187751/1‑94 (MQ=60)

                                                                                   CACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAG            <  SRR4302543.3203150/94‑1 (MQ=60)

                                                                                    ACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGG           >  SRR4302543.7614517/1‑94 (MQ=60)

                                                                                     CTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCggttag          >  SRR4302543.4555239/1‑88 (MQ=60)

                                                                                     CTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGC          >  SRR4302543.6128524/1‑94 (MQ=60)

                                                                                     CTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCCCCTGAGGC          >  SRR4302543.1763014/1‑94 (MQ=60)

                                                                                      TCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG         >  SRR4302543.3513792/1‑94 (MQ=60)

                                                                                       CTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGC        >  SRR4302543.292240/1‑94 (MQ=60)

                                                                                       CTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGC        >  SRR4302543.1369619/1‑94 (MQ=60)

                                                                                         GAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGG      <  SRR4302543.1247787/94‑1 (MQ=60)

                                                                                           ACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGG    <  SRR4302543.6588468/94‑1 (MQ=60)

                                                                                             GCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCcccgccccgggcgcggggg  >  SRR4302543.5717422/1‑75 (MQ=60)

                                                                                             GCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGT  <  SRR4302543.5229020/94‑1 (MQ=60)

                                                                                             GCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGT  <  SRR4302543.3687830/94‑1 (MQ=60)

TTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGT  >  NC_000913/4080102‑4080288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`