Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,080,195 |
A→G |
C49R (TGT→CGT) |
fdoH ← |
formate dehydrogenase‑O, iron‑sulfur subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,080,195 | 0 | A | G | 100.0%
| 726.7
/ NA
| 232 | C49R (TGT→CGT) | fdoH | formate dehydrogenase‑O, iron‑sulfur subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (124/108); total (124/108) |
Only 100 of 238 total aligned reads displayed.
CGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGG > NC_000913/4080106‑4080284
|
gTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGcc < 2:3055914/93‑1 (MQ=255)
gTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGcc < 2:4071322/93‑1 (MQ=255)
cACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCAcc > 2:236212/1‑93 (MQ=255)
cACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCAcc > 2:4280277/1‑93 (MQ=255)
gATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGa < 1:1352483/93‑1 (MQ=255)
gATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGa < 2:1486391/93‑1 (MQ=255)
aTTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGAc > 2:1360107/1‑93 (MQ=255)
aTTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGAc > 2:144320/1‑93 (MQ=255)
tttGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACa > 2:818870/1‑93 (MQ=255)
tttGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACa > 2:3622969/1‑93 (MQ=255)
ttGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAg > 2:344026/1‑93 (MQ=255)
ttGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAg < 1:2189211/93‑1 (MQ=255)
tGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAgg > 2:1006831/1‑93 (MQ=255)
ggCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGc < 1:3959362/93‑1 (MQ=255)
gcgcTTAAATCATTGGGGGTGTCGTACACCCCAATGTTATTACCGACGGTAGCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCt < 2:1948358/93‑1 (MQ=38)
ttAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTAc > 1:497948/1‑93 (MQ=255)
ttAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTAc > 1:2531117/1‑93 (MQ=255)
tAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACa < 1:2136161/93‑1 (MQ=255)
aaaTCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAg > 2:3890352/1‑93 (MQ=255)
cATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGa < 2:4194610/93‑1 (MQ=255)
aTTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGAt > 2:4378720/1‑93 (MQ=255)
aTTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGAt > 2:1026152/1‑93 (MQ=255)
ttGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATa > 2:3921911/1‑93 (MQ=255)
ttGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATa > 1:3408553/1‑93 (MQ=255)
ttGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATa > 2:319133/1‑93 (MQ=255)
ttGGGGTTGTCGTACACCCCAATGTTATTCCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGTCGATa > 2:4328193/1‑93 (MQ=255)
tgggTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACa < 1:2091092/92‑1 (MQ=255)
ggggTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACa > 1:840804/1‑93 (MQ=255)
gggTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAg < 2:1710305/93‑1 (MQ=255)
gTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAggt < 2:2254494/93‑1 (MQ=255)
gTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAggt < 1:1997106/93‑1 (MQ=255)
gTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAggt < 1:673976/93‑1 (MQ=255)
ttGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTTCCGCCGATACAggtg > 2:2166672/1‑93 (MQ=255)
ttGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAggtg < 2:4552459/93‑1 (MQ=255)
gTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAggtggt > 2:385849/1‑93 (MQ=255)
cGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTaa < 2:4457988/93‑1 (MQ=255)
gTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAAc < 2:2711182/93‑1 (MQ=255)
tACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACg > 1:4609887/1‑93 (MQ=255)
acacCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGt < 1:4089531/93‑1 (MQ=255)
cacCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTc < 2:3750606/93‑1 (MQ=255)
acCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCg > 2:1559837/1‑93 (MQ=255)
acCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGAGGTAACGTCg > 2:2037187/1‑93 (MQ=255)
acCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGACACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCg > 1:700225/1‑93 (MQ=255)
ccccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGa < 1:1814417/93‑1 (MQ=255)
ccccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGa < 2:4538964/93‑1 (MQ=255)
cccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAt < 2:2270491/93‑1 (MQ=255)
cccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAt > 2:616403/1‑93 (MQ=255)
cccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAt > 1:3627732/1‑93 (MQ=255)
ccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATg > 1:1435324/1‑93 (MQ=255)
ccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATg > 1:4417986/1‑93 (MQ=255)
ccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATg > 2:3805360/1‑93 (MQ=255)
aaTGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAg > 2:481178/1‑93 (MQ=255)
aTGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGt > 1:125684/1‑93 (MQ=255)
aTGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGt > 1:3660392/1‑93 (MQ=255)
tGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGtt < 1:4414851/93‑1 (MQ=255)
gTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGttt > 1:3495926/1‑93 (MQ=255)
ttATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTc > 2:29765/1‑93 (MQ=255)
ttATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTc > 1:4667442/1‑93 (MQ=255)
ttATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTc < 1:3273453/93‑1 (MQ=255)
gtATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTc < 1:2045087/92‑1 (MQ=255)
aTTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGc > 1:808791/1‑93 (MQ=255)
tGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCa > 1:1915621/1‑93 (MQ=255)
gCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCAc < 2:3243998/93‑1 (MQ=255)
cGACGGTATCGCGAATGTCCTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActt > 2:4579794/1‑93 (MQ=255)
aCGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActtct < 2:1845044/93‑1 (MQ=255)
cGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCACCActtctt < 2:710298/93‑1 (MQ=255)
cGGTATCGCGAATGTCGTCCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActtctt < 2:4144697/93‑1 (MQ=255)
gTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTcc < 1:3116134/93‑1 (MQ=255)
tATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCt < 2:1936101/93‑1 (MQ=255)
aTCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTg > 2:2420615/1‑93 (MQ=255)
aTCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTg < 2:166007/93‑1 (MQ=255)
tCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTgg > 2:544890/1‑93 (MQ=255)
gcgAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGaa < 2:1084320/93‑1 (MQ=255)
cgAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAg > 1:1502577/1‑93 (MQ=255)
cgAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAg < 2:344098/93‑1 (MQ=255)
gAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGt > 2:1746254/1‑93 (MQ=255)
gAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGt > 2:1152994/1‑93 (MQ=255)
aaTGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTc > 1:59246/1‑93 (MQ=255)
aaTGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTc > 1:2687204/1‑93 (MQ=255)
aaTGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTc > 1:3778115/1‑93 (MQ=255)
aaTGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTc > 1:3294675/1‑93 (MQ=255)
aTGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTcc > 2:915626/1‑93 (MQ=255)
aTGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTcc < 1:3925868/93‑1 (MQ=255)
aTGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTcc < 1:2863623/93‑1 (MQ=255)
tGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTccc > 1:104592/1‑93 (MQ=255)
tGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTccc < 1:417935/93‑1 (MQ=255)
gTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCcg > 1:237012/1‑93 (MQ=255)
gTTCCACTCTGACCGCGCCACCTGACAGGCTTTACAGCCGATACATGTGGTAACGTCCGTGAGTTTCGCCACTTCTTCCTGGAAGTCCCgcgc > 1:2261973/1‑93 (MQ=21)
gTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCgcgc > 2:2588122/1‑93 (MQ=255)
gTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCgcgc > 2:3351306/1‑93 (MQ=255)
tCCACTCTGAGCGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCt > 2:2870377/1‑93 (MQ=255)
tCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCt > 1:3137378/1‑93 (MQ=255)
cACTCGGAACGCGCCACCTGACAGCCTTGACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGa < 2:1786541/93‑1 (MQ=21)
aCTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCACGCGCCTGAg > 1:1980897/1‑93 (MQ=255)
ctctGAACGCGCCCCCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAgg < 1:4243673/93‑1 (MQ=255)
tctGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGgc > 1:1933064/1‑93 (MQ=255)
tctGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGgc < 2:2951736/93‑1 (MQ=255)
tGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGgcgc > 1:3886425/1‑93 (MQ=255)
tGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGgcgc > 1:1102093/1‑93 (MQ=255)
tGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGACTGAGgcgc < 2:644276/93‑1 (MQ=255)
|
CGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGG > NC_000913/4080106‑4080284
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGT > NC_000913/4080104‑4080288
|
ACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCG < SRR4302535.4556567/94‑1 (MQ=60)
ACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGATATCGCGAATGTCGTTCCACTCTGAACGCG < SRR4302535.3094701/94‑1 (MQ=60)
TCCACTATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCAC > SRR4302535.4088268/1‑94 (MQ=60)
CACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCT < SRR4302535.911628/94‑1 (MQ=60)
CACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCT > SRR4302535.43377/1‑94 (MQ=60)
ACAATTTGGCGCTTAAATCATTGGGGTGATCGTACTCCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCGCTCTGAACGCGCCACCTG < SRR4302535.306066/94‑1 (MQ=60)
GATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGAC < SRR4302535.711713/94‑1 (MQ=60)
GATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGAC < SRR4302535.1362162/94‑1 (MQ=60)
GATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGAC < SRR4302535.1938124/94‑1 (MQ=60)
TTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGG < SRR4302535.2204801/94‑1 (MQ=60)
TTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGG < SRR4302535.3904023/94‑1 (MQ=60)
TTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGG < SRR4302535.2380521/94‑1 (MQ=60)
TTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGG > SRR4302535.578255/1‑94 (MQ=60)
GGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCT < SRR4302535.3986401/94‑1 (MQ=60)
CGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTT > SRR4302535.470536/1‑94 (MQ=60)
CGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTT > SRR4302535.2135987/1‑94 (MQ=60)
CTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTAC > SRR4302535.2549356/1‑94 (MQ=60)
CTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTAC > SRR4302535.501440/1‑94 (MQ=60)
TTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACA > SRR4302535.244348/1‑94 (MQ=60)
TAAATGATTGGGGTTGTCGTACTCCCCAATGTTATTGCCGACGGTATCGCGAATTTCGTTCCTCTCTGAACGCGCCACCTGACAGGCTTTACAG < SRR4302535.2151551/94‑1 (MQ=60)
TAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAG < SRR4302535.2151550/94‑1 (MQ=60)
AATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCC > SRR4302535.1596357/1‑94 (MQ=60)
ATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCG < SRR4302535.4218539/94‑1 (MQ=60)
TCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGA < SRR4302535.3395467/94‑1 (MQ=60)
CATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGAT < SRR4302535.4446027/94‑1 (MQ=60)
CATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGAT > SRR4302535.4510785/1‑94 (MQ=60)
CATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGAT > SRR4302535.3391214/1‑94 (MQ=60)
ATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATA > SRR4302535.3432278/1‑94 (MQ=60)
TTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATAC < SRR4302535.1363959/94‑1 (MQ=60)
TGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACA > SRR4302535.846706/1‑94 (MQ=60)
TGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAG < SRR4302535.2106160/94‑1 (MQ=60)
GGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAG < SRR4302535.2053572/94‑1 (MQ=60)
GGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGT < SRR4302535.3748652/94‑1 (MQ=60)
GTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTG < SRR4302535.2011484/94‑1 (MQ=60)
GTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTG < SRR4302535.678683/94‑1 (MQ=60)
GTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTG < SRR4302535.3220369/94‑1 (MQ=60)
CGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAAC < SRR4302535.2033985/94‑1 (MQ=60)
GTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACG < SRR4302535.1930837/94‑1 (MQ=60)
GTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACG > SRR4302535.4641209/1‑94 (MQ=60)
GTACACCCCAATGTTATTGCCAACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACG > SRR4302535.1075872/1‑94 (MQ=60)
ACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTC < SRR4302535.4117511/94‑1 (MQ=60)
ACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTC < SRR4302535.675111/94‑1 (MQ=60)
ACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTC < SRR4302535.814536/94‑1 (MQ=60)
CACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGACACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCG > SRR4302535.705136/1‑94 (MQ=60)
CCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAT > SRR4302535.3652876/1‑94 (MQ=60)
CCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAT > SRR4302535.329958/1‑94 (MQ=60)
CCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAT < SRR4302535.1827537/94‑1 (MQ=60)
CCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATG > SRR4302535.4448234/1‑94 (MQ=60)
CCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATG > SRR4302535.1445575/1‑94 (MQ=60)
CCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATG < SRR4302535.3656473/94‑1 (MQ=60)
CAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAG < SRR4302535.3829900/94‑1 (MQ=60)
CAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAG < SRR4302535.256939/94‑1 (MQ=60)
AATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGT > SRR4302535.126568/1‑94 (MQ=60)
AATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGT > SRR4302535.1453462/1‑94 (MQ=60)
AATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGT > SRR4302535.3685728/1‑94 (MQ=60)
ATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTT > SRR4302535.2003961/1‑94 (MQ=60)
TGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTT < SRR4302535.4445066/94‑1 (MQ=60)
TGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTT > SRR4302535.3520219/1‑94 (MQ=60)
GTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTC > SRR4302535.4698985/1‑94 (MQ=60)
GTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTC < SRR4302535.4521430/94‑1 (MQ=60)
TTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCG < SRR4302535.3296189/94‑1 (MQ=60)
TTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCG > SRR4302535.2196932/1‑94 (MQ=60)
GTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCG < SRR4302535.2059817/94‑1 (MQ=60)
TATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGC > SRR4302535.814452/1‑94 (MQ=60)
TTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCA > SRR4302535.1929426/1‑94 (MQ=60)
GCCGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATAAAGGTGGTAACGTCGATGAGTTTCGCCACT > SRR4302535.52092/1‑94 (MQ=60)
CGACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTC > SRR4302535.1987513/1‑94 (MQ=60)
GACGGTATCGCGAATCTCGTGCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCT < SRR4302535.3967009/94‑1 (MQ=60)
ACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTT < SRR4302535.3577888/94‑1 (MQ=60)
ACGGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTT < SRR4302535.2754010/94‑1 (MQ=60)
GGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCC > SRR4302535.2212710/1‑94 (MQ=60)
GGTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCC < SRR4302535.733524/94‑1 (MQ=60)
GTATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCT < SRR4302535.3137827/94‑1 (MQ=60)
ATCGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGG < SRR4302535.1111085/94‑1 (MQ=60)
CGCGAATGTCGTTCCACTCTGGACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAA > SRR4302535.4675042/1‑94 (MQ=60)
CGCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAA > SRR4302535.2070765/1‑94 (MQ=60)
GCGAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAG > SRR4302535.1513386/1‑94 (MQ=60)
CGAAGGTCTTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGT < SRR4302535.4045585/94‑1 (MQ=60)
GAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTC > SRR4302535.59681/1‑94 (MQ=60)
GAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTC > SRR4302535.2706414/1‑94 (MQ=60)
GAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTC < SRR4302535.4140855/94‑1 (MQ=60)
GAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTC > SRR4302535.3317577/1‑94 (MQ=60)
GAATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTC > SRR4302535.3804156/1‑94 (MQ=60)
AATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCC < SRR4302535.1860976/94‑1 (MQ=60)
ATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCC < SRR4302535.2883914/94‑1 (MQ=60)
ATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCC > SRR4302535.395271/1‑94 (MQ=60)
ATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCC > SRR4302535.105337/1‑94 (MQ=60)
ATGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCC < SRR4302535.3952691/94‑1 (MQ=60)
TGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCG < SRR4302535.420865/94‑1 (MQ=60)
TGTCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCG > SRR4302535.238647/1‑94 (MQ=60)
TCGTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCG < SRR4302535.2711084/94‑1 (MQ=60)
TCGTCCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCG < SRR4302535.850039/94‑1 (MQ=60)
CGTTCCACTCTGACCGCGCCACCTGACAGGCTTTACAGCCGATACATGTGGTAACGTCCGTGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGC > SRR4302535.2278086/1‑94 (MQ=60)
GTTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCC > SRR4302535.701977/1‑94 (MQ=60)
TTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCT > SRR4302535.1296984/1‑94 (MQ=60)
TTCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCT > SRR4302535.3159210/1‑94 (MQ=60)
TCCACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTG > SRR4302535.1299739/1‑94 (MQ=60)
CACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAG < SRR4302535.4290800/94‑1 (MQ=60)
CACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCACGCGCCTGAG > SRR4302535.1995161/1‑94 (MQ=60)
ACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGCGG > SRR4302535.3671861/1‑94 (MQ=60)
ACTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGG > SRR4302535.3083224/1‑94 (MQ=60)
CTCTGAACGCGCCCCCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGC < SRR4302535.4272719/94‑1 (MQ=60)
CTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGC > SRR4302535.1946988/1‑94 (MQ=60)
CTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGC > SRR4302535.3499397/1‑94 (MQ=60)
CTCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGC < SRR4302535.2362124/94‑1 (MQ=60)
TCTGAACGCGCCACCTGACAGGCTTTACAGCCGATACGGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG < SRR4302535.3140516/94‑1 (MQ=60)
CTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGC > SRR4302535.1109968/1‑94 (MQ=60)
CTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGC > SRR4302535.3913083/1‑94 (MQ=60)
CTGAACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGC > SRR4302535.1611489/1‑94 (MQ=60)
AACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGG > SRR4302535.922739/1‑94 (MQ=60)
AACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGG < SRR4302535.3160617/94‑1 (MQ=60)
ACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGG < SRR4302535.1359510/94‑1 (MQ=60)
ACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGG > SRR4302535.3822595/1‑94 (MQ=60)
ACGCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGG < SRR4302535.292527/94‑1 (MQ=60)
GCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGT < SRR4302535.556847/94‑1 (MQ=60)
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ACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGT > NC_000913/4080104‑4080288
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
